HEADER TRANSFERASE 30-SEP-25 9SUW TITLE S-ADENOSYLMETHIONINE SYNTHETASE OF ESCHERICHIA COLI I103A IN COMPLEX TITLE 2 WITH (S,R)-SAM AND PNP CAVEAT 9SUW SAM A 402 HAS WRONG CHIRALITY AT ATOM CA COMPND MOL_ID: 1; COMPND 2 MOLECULE: S-ADENOSYLMETHIONINE SYNTHASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ADOMET SYNTHASE,MAT,METHIONINE ADENOSYLTRANSFERASE; COMPND 5 EC: 2.5.1.6; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: METK, ECE24377A_3284; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SAM BIOSYNTHESIS, STEREOSELECTIVITY, (S, R)-SAM, PPNP, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.BOLZ,L.GERICKE,P.LUKAT,J.ANDEXER,W.BLANKENFELDT REVDAT 1 04-NOV-26 9SUW 0 JRNL AUTH L.GERICKE,M.BOLZ,K.KIND,A.NAGEL,J.BRENNEISEN,J.PLEISS, JRNL AUTH 2 W.BLANKENFELDT,J.ANDEXER JRNL TITL SELECTIVITY OF METHIONINE ADENOSYLTRANSFERASES REGARDING JRNL TITL 2 METHIONINE ENANTIOMERS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.20.1_4487: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 62.66 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 29700 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.180 REMARK 3 FREE R VALUE TEST SET COUNT : 1539 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 62.6600 - 5.1200 0.99 2765 155 0.1719 0.1942 REMARK 3 2 5.1100 - 4.0600 0.99 2591 151 0.1638 0.1786 REMARK 3 3 4.0600 - 3.5500 0.99 2573 136 0.1987 0.2159 REMARK 3 4 3.5500 - 3.2200 0.99 2510 159 0.2070 0.2553 REMARK 3 5 3.2200 - 2.9900 1.00 2551 135 0.2343 0.2545 REMARK 3 6 2.9900 - 2.8200 1.00 2536 136 0.2324 0.2792 REMARK 3 7 2.8100 - 2.6700 1.00 2537 125 0.2330 0.2785 REMARK 3 8 2.6700 - 2.5600 1.00 2543 120 0.2457 0.2520 REMARK 3 9 2.5600 - 2.4600 1.00 2533 134 0.2749 0.2928 REMARK 3 10 2.4600 - 2.3700 1.00 2513 146 0.3162 0.3191 REMARK 3 11 2.3700 - 2.3000 1.00 2509 142 0.3566 0.3544 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.360 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 2992 REMARK 3 ANGLE : 0.617 4067 REMARK 3 CHIRALITY : 0.043 454 REMARK 3 PLANARITY : 0.005 531 REMARK 3 DIHEDRAL : 5.759 433 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3 THROUGH 89 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.5008 39.8272 14.6869 REMARK 3 T TENSOR REMARK 3 T11: 0.5492 T22: 0.4031 REMARK 3 T33: 0.3329 T12: -0.0750 REMARK 3 T13: 0.0762 T23: 0.0281 REMARK 3 L TENSOR REMARK 3 L11: 2.4364 L22: 2.1922 REMARK 3 L33: 1.9837 L12: -0.5288 REMARK 3 L13: 0.1620 L23: 0.6505 REMARK 3 S TENSOR REMARK 3 S11: -0.0991 S12: -0.0495 S13: -0.1821 REMARK 3 S21: -0.5082 S22: -0.0485 S23: 0.0452 REMARK 3 S31: 0.1361 S32: -0.0596 S33: 0.1566 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 90 THROUGH 153 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.0284 29.4639 12.2811 REMARK 3 T TENSOR REMARK 3 T11: 0.7295 T22: 0.3780 REMARK 3 T33: 0.4877 T12: -0.0317 REMARK 3 T13: 0.2040 T23: -0.0178 REMARK 3 L TENSOR REMARK 3 L11: 2.3777 L22: 0.6503 REMARK 3 L33: 1.6236 L12: -1.2499 REMARK 3 L13: -0.4292 L23: 0.1957 REMARK 3 S TENSOR REMARK 3 S11: -0.1722 S12: 0.0702 S13: -0.4404 REMARK 3 S21: -0.5867 S22: 0.0672 S23: -0.2555 REMARK 3 S31: 0.4216 S32: 0.1979 S33: 0.0609 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 154 THROUGH 321 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.7042 21.7053 20.4576 REMARK 3 T TENSOR REMARK 3 T11: 0.6971 T22: 0.4373 REMARK 3 T33: 0.5961 T12: -0.0116 REMARK 3 T13: 0.2376 T23: 0.1334 REMARK 3 L TENSOR REMARK 3 L11: 2.1482 L22: 1.5825 REMARK 3 L33: 1.4402 L12: 0.3260 REMARK 3 L13: 0.0311 L23: -0.2361 REMARK 3 S TENSOR REMARK 3 S11: -0.2124 S12: -0.2891 S13: -0.6208 REMARK 3 S21: -0.3916 S22: 0.0854 S23: -0.0942 REMARK 3 S31: 0.5223 S32: 0.0347 S33: 0.1498 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 322 THROUGH 382 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.6891 23.4588 3.2291 REMARK 3 T TENSOR REMARK 3 T11: 0.9323 T22: 0.5453 REMARK 3 T33: 0.6004 T12: -0.0238 REMARK 3 T13: 0.3263 T23: -0.0858 REMARK 3 L TENSOR REMARK 3 L11: 1.3660 L22: 1.5581 REMARK 3 L33: 2.0110 L12: 0.0554 REMARK 3 L13: 0.0978 L23: -0.3039 REMARK 3 S TENSOR REMARK 3 S11: 0.2553 S12: 0.2868 S13: -0.2961 REMARK 3 S21: -0.8455 S22: -0.1290 S23: -0.4624 REMARK 3 S31: 0.2267 S32: 0.5405 S33: -0.0510 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9SUW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-SEP-25. REMARK 100 THE DEPOSITION ID IS D_1292151151. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-MAY-25 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.22 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, DESY REMARK 200 BEAMLINE : P11 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.03321 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 87996 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.990 REMARK 200 RESOLUTION RANGE LOW (A) : 105.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 40.20 REMARK 200 R MERGE (I) : 0.36000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.99 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.09 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 40.00 REMARK 200 R MERGE FOR SHELL (I) : 4.79400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.03 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 19% EG, 7.2% PEG 8K, 0.029 M LITHIUM REMARK 280 SULFATE, 0.1M TRIS BASE PH 7.22, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+2/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 94.65333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 47.32667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 94.65333 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 47.32667 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 94.65333 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 47.32667 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 94.65333 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 47.32667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866000 0.000000 0.00000 REMARK 350 BIOMT2 2 -0.866000 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 47.32700 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 -62.65500 REMARK 350 BIOMT2 3 0.000000 -1.000000 0.000000 108.52300 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.500000 0.866000 0.000000 -62.65500 REMARK 350 BIOMT2 4 0.866000 -0.500000 0.000000 108.52300 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 47.32700 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 518 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 LYS A 2 REMARK 465 ASP A 101 REMARK 465 ALA A 102 REMARK 465 ASN A 103 REMARK 465 GLN A 104 REMARK 465 GLY A 105 REMARK 465 LYS A 383 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 47 108.64 -47.17 REMARK 500 ASN A 128 21.43 -79.78 REMARK 500 ASP A 174 40.32 37.48 REMARK 500 LYS A 245 36.95 -140.44 REMARK 500 TYR A 251 -4.66 64.04 REMARK 500 PHE A 332 -27.24 65.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 403 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 16 OD2 REMARK 620 2 PPK A 401 O3G 86.5 REMARK 620 3 PPK A 401 O2B 84.9 10.5 REMARK 620 4 HOH A 502 O 93.8 11.7 9.1 REMARK 620 5 HOH A 503 O 86.0 17.7 7.4 11.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 404 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 271 OD2 REMARK 620 2 PPK A 401 O2G 71.5 REMARK 620 3 PPK A 401 O1A 121.2 77.6 REMARK 620 4 HOH A 504 O 151.0 90.3 74.2 REMARK 620 5 HOH A 510 O 59.3 97.0 76.9 147.8 REMARK 620 6 HOH A 521 O 134.2 152.6 79.3 69.3 91.9 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 9SQ1 RELATED DB: PDB REMARK 900 RELATED ID: 9SUP RELATED DB: PDB DBREF 9SUW A 1 383 UNP A7ZR64 METK_ECO24 2 384 SEQADV 9SUW ALA A 102 UNP A7ZR64 ILE 103 ENGINEERED MUTATION SEQRES 1 A 383 ALA LYS HIS LEU PHE THR SER GLU SER VAL SER GLU GLY SEQRES 2 A 383 HIS PRO ASP LYS ILE ALA ASP GLN ILE SER ASP ALA VAL SEQRES 3 A 383 LEU ASP ALA ILE LEU GLU GLN ASP PRO LYS ALA ARG VAL SEQRES 4 A 383 ALA CYS GLU THR TYR VAL LYS THR GLY MET VAL LEU VAL SEQRES 5 A 383 GLY GLY GLU ILE THR THR SER ALA TRP VAL ASP ILE GLU SEQRES 6 A 383 GLU ILE THR ARG ASN THR VAL ARG GLU ILE GLY TYR VAL SEQRES 7 A 383 HIS SER ASP MET GLY PHE ASP ALA ASN SER CYS ALA VAL SEQRES 8 A 383 LEU SER ALA ILE GLY LYS GLN SER PRO ASP ALA ASN GLN SEQRES 9 A 383 GLY VAL ASP ARG ALA ASP PRO LEU GLU GLN GLY ALA GLY SEQRES 10 A 383 ASP GLN GLY LEU MET PHE GLY TYR ALA THR ASN GLU THR SEQRES 11 A 383 ASP VAL LEU MET PRO ALA PRO ILE THR TYR ALA HIS ARG SEQRES 12 A 383 LEU VAL GLN ARG GLN ALA GLU VAL ARG LYS ASN GLY THR SEQRES 13 A 383 LEU PRO TRP LEU ARG PRO ASP ALA LYS SER GLN VAL THR SEQRES 14 A 383 PHE GLN TYR ASP ASP GLY LYS ILE VAL GLY ILE ASP ALA SEQRES 15 A 383 VAL VAL LEU SER THR GLN HIS SER GLU GLU ILE ASP GLN SEQRES 16 A 383 LYS SER LEU GLN GLU ALA VAL MET GLU GLU ILE ILE LYS SEQRES 17 A 383 PRO ILE LEU PRO ALA GLU TRP LEU THR SER ALA THR LYS SEQRES 18 A 383 PHE PHE ILE ASN PRO THR GLY ARG PHE VAL ILE GLY GLY SEQRES 19 A 383 PRO MET GLY ASP CYS GLY LEU THR GLY ARG LYS ILE ILE SEQRES 20 A 383 VAL ASP THR TYR GLY GLY MET ALA ARG HIS GLY GLY GLY SEQRES 21 A 383 ALA PHE SER GLY LYS ASP PRO SER LYS VAL ASP ARG SER SEQRES 22 A 383 ALA ALA TYR ALA ALA ARG TYR VAL ALA LYS ASN ILE VAL SEQRES 23 A 383 ALA ALA GLY LEU ALA ASP ARG CYS GLU ILE GLN VAL SER SEQRES 24 A 383 TYR ALA ILE GLY VAL ALA GLU PRO THR SER ILE MET VAL SEQRES 25 A 383 GLU THR PHE GLY THR GLU LYS VAL PRO SER GLU GLN LEU SEQRES 26 A 383 THR LEU LEU VAL ARG GLU PHE PHE ASP LEU ARG PRO TYR SEQRES 27 A 383 GLY LEU ILE GLN MET LEU ASP LEU LEU HIS PRO ILE TYR SEQRES 28 A 383 LYS GLU THR ALA ALA TYR GLY HIS PHE GLY ARG GLU HIS SEQRES 29 A 383 PHE PRO TRP GLU LYS THR ASP LYS ALA GLN LEU LEU ARG SEQRES 30 A 383 ASP ALA ALA GLY LEU LYS HET PPK A 401 13 HET SAM A 402 27 HET MG A 403 1 HET MG A 404 1 HETNAM PPK (DIPHOSPHONO)AMINOPHOSPHONIC ACID HETNAM SAM S-ADENOSYLMETHIONINE HETNAM MG MAGNESIUM ION FORMUL 2 PPK H6 N O9 P3 FORMUL 3 SAM C15 H22 N6 O5 S FORMUL 4 MG 2(MG 2+) FORMUL 6 HOH *31(H2 O) HELIX 1 AA1 HIS A 14 ASP A 34 1 21 HELIX 2 AA2 ASP A 63 GLY A 76 1 14 HELIX 3 AA3 SER A 80 GLY A 83 5 4 HELIX 4 AA4 ASP A 110 GLN A 114 5 5 HELIX 5 AA5 PRO A 135 ASN A 154 1 20 HELIX 6 AA6 ASP A 194 ILE A 206 1 13 HELIX 7 AA7 PRO A 212 LEU A 216 5 5 HELIX 8 AA8 THR A 250 MET A 254 5 5 HELIX 9 AA9 LYS A 269 ALA A 288 1 20 HELIX 10 AB1 PRO A 321 VAL A 329 1 9 HELIX 11 AB2 ARG A 336 ASP A 345 1 10 HELIX 12 AB3 TYR A 351 ALA A 356 5 6 HELIX 13 AB4 PHE A 365 LYS A 369 5 5 HELIX 14 AB5 LYS A 372 ALA A 380 1 9 SHEET 1 AA1 4 LEU A 4 VAL A 10 0 SHEET 2 AA1 4 LEU A 160 ASP A 173 -1 O PHE A 170 N PHE A 5 SHEET 3 AA1 4 LYS A 176 HIS A 189 -1 O GLN A 188 N ASP A 163 SHEET 4 AA1 4 LYS A 221 ILE A 224 1 O PHE A 223 N VAL A 183 SHEET 1 AA2 4 ALA A 90 GLY A 96 0 SHEET 2 AA2 4 MET A 49 THR A 57 1 N VAL A 52 O ALA A 94 SHEET 3 AA2 4 ARG A 38 LYS A 46 -1 N TYR A 44 O LEU A 51 SHEET 4 AA2 4 GLY A 240 LEU A 241 -1 O GLY A 240 N VAL A 45 SHEET 1 AA3 2 VAL A 78 HIS A 79 0 SHEET 2 AA3 2 PHE A 84 ASP A 85 -1 O PHE A 84 N HIS A 79 SHEET 1 AA4 3 GLY A 120 THR A 127 0 SHEET 2 AA4 3 ARG A 293 TYR A 300 -1 O VAL A 298 N MET A 122 SHEET 3 AA4 3 SER A 309 GLU A 313 -1 O GLU A 313 N GLU A 295 LINK OD2 ASP A 16 MG MG A 403 1555 9555 2.54 LINK OD2 ASP A 271 MG MG A 404 1555 1555 2.95 LINK O3G PPK A 401 MG MG A 403 1555 1555 2.38 LINK O2B PPK A 401 MG MG A 403 1555 1555 2.73 LINK O2G PPK A 401 MG MG A 404 1555 1555 2.37 LINK O1A PPK A 401 MG MG A 404 1555 1555 2.31 LINK MG MG A 403 O HOH A 502 1555 1555 2.09 LINK MG MG A 403 O HOH A 503 1555 1555 2.83 LINK MG MG A 404 O HOH A 504 1555 9555 2.43 LINK MG MG A 404 O HOH A 510 1555 1555 2.14 LINK MG MG A 404 O HOH A 521 1555 9555 2.63 CRYST1 125.311 125.311 141.980 90.00 90.00 120.00 P 62 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007980 0.004607 0.000000 0.00000 SCALE2 0.000000 0.009215 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007043 0.00000 CONECT 2004 2933 CONECT 2892 2893 CONECT 2893 2892 2894 2895 2896 CONECT 2894 2893 2933 CONECT 2895 2893 2932 CONECT 2896 2893 2897 CONECT 2897 2896 2898 2899 2900 CONECT 2898 2897 CONECT 2899 2897 2932 CONECT 2900 2897 2901 CONECT 2901 2900 2902 2903 2904 CONECT 2902 2901 2933 CONECT 2903 2901 CONECT 2904 2901 CONECT 2905 2906 CONECT 2906 2905 2907 2910 CONECT 2907 2906 2908 2909 CONECT 2908 2907 CONECT 2909 2907 CONECT 2910 2906 2911 CONECT 2911 2910 2912 CONECT 2912 2911 2913 2914 CONECT 2913 2912 CONECT 2914 2912 2915 CONECT 2915 2914 2916 2917 CONECT 2916 2915 2921 CONECT 2917 2915 2918 2919 CONECT 2918 2917 CONECT 2919 2917 2920 2921 CONECT 2920 2919 CONECT 2921 2916 2919 2922 CONECT 2922 2921 2923 2931 CONECT 2923 2922 2924 CONECT 2924 2923 2925 CONECT 2925 2924 2926 2931 CONECT 2926 2925 2927 2928 CONECT 2927 2926 CONECT 2928 2926 2929 CONECT 2929 2928 2930 CONECT 2930 2929 2931 CONECT 2931 2922 2925 2930 CONECT 2932 2895 2899 2935 2936 CONECT 2933 2004 2894 2902 2943 CONECT 2935 2932 CONECT 2936 2932 CONECT 2943 2933 MASTER 374 0 4 14 13 0 0 6 2954 1 46 30 END