HEADER TRANSFERASE 07-OCT-25 9SWY TITLE THE STRUCTURE OF AFUAP1 IN COMPLEX WITH GLCNAC-1P COMPND MOL_ID: 1; COMPND 2 MOLECULE: UDP-N-ACETYLGLUCOSAMINE DIPHOSPHORYLASE; COMPND 3 CHAIN: B; COMPND 4 EC: 2.7.7.23; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: UDP-N-ACETYLGLUCOSAMINE DIPHOSPHORYLASE; COMPND 8 CHAIN: A; COMPND 9 EC: 2.7.7.23; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS FUMIGATUS; SOURCE 3 ORGANISM_TAXID: 746128; SOURCE 4 GENE: KXV57_008857; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: ASPERGILLUS FUMIGATUS; SOURCE 9 ORGANISM_TAXID: 746128; SOURCE 10 GENE: KXV57_008857; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS UAP, GLCNAC-1P, CONFORMATION, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR K.YAN,O.RAIMI,X.CHEN REVDAT 1 28-JAN-26 9SWY 0 JRNL AUTH K.YAN,M.STANLEY,O.RAIMI,A.T.FERENBACH,H.C.DORFMUELLER, JRNL AUTH 2 D.M.F.VAN AALTEN JRNL TITL CELL WALL TARGET FRAGMENT DISCOVERY USING A LOW-COST, JRNL TITL 2 MINIMAL FRAGMENT LIBRARY. JRNL REF FEBS LETT. 2026 JRNL REFN ISSN 0014-5793 JRNL PMID 41532565 JRNL DOI 10.1002/1873-3468.70281 REMARK 2 REMARK 2 RESOLUTION. 1.72 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0352 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.72 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 71.54 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.6 REMARK 3 NUMBER OF REFLECTIONS : 110112 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.211 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.700 REMARK 3 FREE R VALUE TEST SET COUNT : 1925 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.72 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.77 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4821 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 57.34 REMARK 3 BIN R VALUE (WORKING SET) : 0.5170 REMARK 3 BIN FREE R VALUE SET COUNT : 94 REMARK 3 BIN FREE R VALUE : 0.5240 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7344 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 216 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 43.56 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.21000 REMARK 3 B22 (A**2) : -2.22000 REMARK 3 B33 (A**2) : -1.99000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.114 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.116 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.139 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.013 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.952 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7534 ; 0.007 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 6939 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10196 ; 1.432 ; 1.647 REMARK 3 BOND ANGLES OTHERS (DEGREES): 16212 ; 0.475 ; 1.564 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 951 ; 6.663 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 40 ; 7.219 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1264 ;15.230 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1122 ; 0.067 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8550 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1434 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3807 ; 3.600 ; 4.517 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3807 ; 3.599 ; 4.517 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4748 ; 4.949 ; 6.757 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 4749 ; 4.948 ; 6.758 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3727 ; 4.099 ; 4.797 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 3728 ; 4.099 ; 4.797 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 5446 ; 6.084 ; 7.051 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 8171 ; 7.655 ;56.583 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 8122 ; 7.632 ;56.031 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 9SWY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 07-OCT-25. REMARK 100 THE DEPOSITION ID IS D_1292151324. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-FEB-25 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 115021 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.720 REMARK 200 RESOLUTION RANGE LOW (A) : 71.540 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 12.70 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.72 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.75 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M SODIUM ACETATE, 25% POLYETHYLENE REMARK 280 GLYCOL (PEG) 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.91700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 71.54050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 68.43250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 71.54050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.91700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 68.43250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP B 88 REMARK 465 ASP B 89 REMARK 465 GLU B 472 REMARK 465 GLY B 473 REMARK 465 ASP B 474 REMARK 465 VAL B 475 REMARK 465 GLU B 508 REMARK 465 GLU B 509 REMARK 465 GLY A 26 REMARK 465 GLY A 143 REMARK 465 SER A 144 REMARK 465 GLU A 390 REMARK 465 GLY A 391 REMARK 465 ASP A 474 REMARK 465 VAL A 475 REMARK 465 GLU A 509 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS B 86 CG CD CE NZ REMARK 470 GLN B 345 CG CD OE1 NE2 REMARK 470 LYS B 383 CE NZ REMARK 470 LYS B 384 NZ REMARK 470 LYS B 389 CD CE NZ REMARK 470 GLU B 394 CG CD OE1 OE2 REMARK 470 PHE B 395 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS B 397 CG CD CE NZ REMARK 470 LYS B 500 CG CD CE NZ REMARK 470 LYS A 37 CD CE NZ REMARK 470 LYS A 38 CG CD CE NZ REMARK 470 GLN A 55 CG CD OE1 NE2 REMARK 470 ARG A 59 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 80 CE NZ REMARK 470 LYS A 86 CG CD CE NZ REMARK 470 ASP A 88 CG OD1 OD2 REMARK 470 LYS A 111 CD CE NZ REMARK 470 LYS A 182 CE NZ REMARK 470 GLU A 336 CG CD OE1 OE2 REMARK 470 LYS A 344 CG CD CE NZ REMARK 470 LYS A 364 CD CE NZ REMARK 470 LYS A 383 CG CD CE NZ REMARK 470 LYS A 384 CG CD CE NZ REMARK 470 LYS A 389 CG CD CE NZ REMARK 470 THR A 392 OG1 CG2 REMARK 470 GLU A 394 CG CD OE1 OE2 REMARK 470 PHE A 396 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 397 CG CD CE NZ REMARK 470 GLU A 399 CG CD OE1 OE2 REMARK 470 LYS A 400 CG CD CE NZ REMARK 470 LYS A 405 CD CE NZ REMARK 470 ARG A 452 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 500 CG CD CE NZ REMARK 470 GLU A 508 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 701 O HOH A 780 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER B 28 145.96 113.66 REMARK 500 ASN B 83 65.86 -119.37 REMARK 500 ASP B 107 18.76 -140.10 REMARK 500 GLN B 345 95.90 14.81 REMARK 500 PRO B 346 11.95 -49.74 REMARK 500 ARG B 352 14.72 -142.74 REMARK 500 GLN A 55 -177.08 -58.94 REMARK 500 ASN A 83 57.06 -119.09 REMARK 500 PRO A 85 30.87 -72.92 REMARK 500 ASP A 88 -79.91 -61.55 REMARK 500 ASP A 89 173.33 67.56 REMARK 500 GLN A 345 77.72 -172.22 REMARK 500 SER A 434 80.52 -152.01 REMARK 500 GLU A 472 64.68 -164.20 REMARK 500 LYS A 495 108.78 -58.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 178 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF1 9SWY B 27 509 UNP A0A229XUD0_ASPFM DBREF2 9SWY B A0A229XUD0 27 509 DBREF1 9SWY A 27 509 UNP A0A229XUD0_ASPFM DBREF2 9SWY A A0A229XUD0 27 509 SEQADV 9SWY GLY B 26 UNP A0A229XUD EXPRESSION TAG SEQADV 9SWY GLY A 26 UNP A0A229XUD EXPRESSION TAG SEQRES 1 B 484 GLY PRO SER ALA GLU GLU PHE GLN GLN LEU ARG LYS LYS SEQRES 2 B 484 TYR THR ASP ALA GLY GLN GLY HIS VAL PHE ALA PHE VAL SEQRES 3 B 484 ASP GLU LEU GLN THR GLY GLU ARG SER GLN LEU PHE HIS SEQRES 4 B 484 GLN LEU SER SER PHE ASP PRO VAL ARG ILE ASN GLU LEU SEQRES 5 B 484 ALA ASP LYS ALA LEU ASN PRO PRO LYS ALA ASP ASP GLY SEQRES 6 B 484 PRO ALA SER LEU GLU PRO LEU PRO ASP ILE ALA THR ALA SEQRES 7 B 484 SER ILE LEU ASP SER ASP PRO LYS ASP LEU GLU GLN TRP SEQRES 8 B 484 TYR GLU GLU GLY LEU LYS LEU VAL ALA GLY ASN LYS VAL SEQRES 9 B 484 ALA VAL VAL LEU MET ALA GLY GLY GLN GLY THR ARG LEU SEQRES 10 B 484 GLY SER SER ALA PRO LYS GLY CYS PHE ASP ILE GLY LEU SEQRES 11 B 484 PRO SER HIS LYS SER LEU PHE GLN ILE GLN ALA GLU ARG SEQRES 12 B 484 ILE ALA LYS LEU GLN LEU LEU ALA GLN ARG ILE SER GLY SEQRES 13 B 484 LYS GLU ALA VAL ILE PRO TRP TYR VAL MET THR SER GLY SEQRES 14 B 484 PRO THR ARG LYS PRO THR GLU GLU PHE PHE GLU GLN HIS SEQRES 15 B 484 LYS TYR PHE GLY LEU ASN LYS SER ASP VAL ILE ILE PHE SEQRES 16 B 484 GLU GLN GLY VAL LEU PRO CYS ILE SER ASN GLU GLY LYS SEQRES 17 B 484 ILE LEU MET GLU SER LYS PHE LYS VAL ALA VAL ALA PRO SEQRES 18 B 484 ASP GLY ASN GLY GLY ILE TYR GLN ALA LEU LEU THR SER SEQRES 19 B 484 GLY VAL ARG GLU ASP MET ARG LYS ARG GLY ILE GLU HIS SEQRES 20 B 484 ILE HIS THR TYR YCM VAL ASP ASN CYS LEU VAL LYS VAL SEQRES 21 B 484 ALA ASP PRO VAL PHE ILE GLY PHE ALA ALA SER LYS GLN SEQRES 22 B 484 VAL ASP ILE ALA THR LYS VAL VAL ARG LYS ARG ASN ALA SEQRES 23 B 484 THR GLU SER VAL GLY LEU ILE LEU GLN LYS ASN GLY LYS SEQRES 24 B 484 PRO ASP VAL VAL GLU TYR SER GLU ILE ASP LYS GLU THR SEQRES 25 B 484 ALA GLU ALA LYS ASP PRO LYS GLN PRO ASP VAL LEU LYS SEQRES 26 B 484 PHE ARG ALA ALA ASN ILE VAL ASN HIS TYR TYR SER PHE SEQRES 27 B 484 LYS PHE PHE GLU SER ILE GLU LEU TRP ALA HIS LYS LEU SEQRES 28 B 484 PRO HIS HIS VAL ALA ARG LYS LYS ILE PRO CYS ILE LYS SEQRES 29 B 484 GLU GLY THR GLY GLU PHE PHE LYS PRO GLU LYS PRO ASN SEQRES 30 B 484 GLY ILE LYS LEU GLU GLN PHE VAL PHE ASP VAL PHE PRO SEQRES 31 B 484 MET THR PRO LEU GLU LYS PHE ALA CYS ILE GLU VAL ARG SEQRES 32 B 484 ARG GLU ASP GLU PHE SER PRO LEU LYS ASN ALA ARG GLY SEQRES 33 B 484 THR GLY GLU ASP ASP PRO ASP THR SER LYS ARG ASP ILE SEQRES 34 B 484 MET SER GLN GLY GLN ARG TRP ILE GLU LYS ALA GLY GLY SEQRES 35 B 484 ILE VAL ILE THR GLU GLY ASP VAL VAL GLY VAL GLU VAL SEQRES 36 B 484 SER PRO LEU ILE SER TYR GLY GLY GLU GLY LEU GLU PHE SEQRES 37 B 484 LEU LYS GLY ARG GLU ILE LYS ALA PRO ALA PHE ILE GLU SEQRES 38 B 484 LYS GLU GLU SEQRES 1 A 484 GLY PRO SER ALA GLU GLU PHE GLN GLN LEU ARG LYS LYS SEQRES 2 A 484 TYR THR ASP ALA GLY GLN GLY HIS VAL PHE ALA PHE VAL SEQRES 3 A 484 ASP GLU LEU GLN THR GLY GLU ARG SER GLN LEU PHE HIS SEQRES 4 A 484 GLN LEU SER SER PHE ASP PRO VAL ARG ILE ASN GLU LEU SEQRES 5 A 484 ALA ASP LYS ALA LEU ASN PRO PRO LYS ALA ASP ASP GLY SEQRES 6 A 484 PRO ALA SER LEU GLU PRO LEU PRO ASP ILE ALA THR ALA SEQRES 7 A 484 SER ILE LEU ASP SER ASP PRO LYS ASP LEU GLU GLN TRP SEQRES 8 A 484 TYR GLU GLU GLY LEU LYS LEU VAL ALA GLY ASN LYS VAL SEQRES 9 A 484 ALA VAL VAL LEU MET ALA GLY GLY GLN GLY THR ARG LEU SEQRES 10 A 484 GLY SER SER ALA PRO LYS GLY CYS PHE ASP ILE GLY LEU SEQRES 11 A 484 PRO SER HIS LYS SER LEU PHE GLN ILE GLN ALA GLU ARG SEQRES 12 A 484 ILE ALA LYS LEU GLN LEU LEU ALA GLN ARG ILE SER GLY SEQRES 13 A 484 LYS GLU ALA VAL ILE PRO TRP TYR VAL MET THR SER GLY SEQRES 14 A 484 PRO THR ARG LYS PRO THR GLU GLU PHE PHE GLU GLN HIS SEQRES 15 A 484 LYS TYR PHE GLY LEU ASN LYS SER ASP VAL ILE ILE PHE SEQRES 16 A 484 GLU GLN GLY VAL LEU PRO CYS ILE SER ASN GLU GLY LYS SEQRES 17 A 484 ILE LEU MET GLU SER LYS PHE LYS VAL ALA VAL ALA PRO SEQRES 18 A 484 ASP GLY ASN GLY GLY ILE TYR GLN ALA LEU LEU THR SER SEQRES 19 A 484 GLY VAL ARG GLU ASP MET ARG LYS ARG GLY ILE GLU HIS SEQRES 20 A 484 ILE HIS THR TYR CYS VAL ASP ASN CYS LEU VAL LYS VAL SEQRES 21 A 484 ALA ASP PRO VAL PHE ILE GLY PHE ALA ALA SER LYS GLN SEQRES 22 A 484 VAL ASP ILE ALA THR LYS VAL VAL ARG LYS ARG ASN ALA SEQRES 23 A 484 THR GLU SER VAL GLY LEU ILE LEU GLN LYS ASN GLY LYS SEQRES 24 A 484 PRO ASP VAL VAL GLU TYR SER GLU ILE ASP LYS GLU THR SEQRES 25 A 484 ALA GLU ALA LYS ASP PRO LYS GLN PRO ASP VAL LEU LYS SEQRES 26 A 484 PHE ARG ALA ALA ASN ILE VAL ASN HIS TYR TYR SER PHE SEQRES 27 A 484 LYS PHE PHE GLU SER ILE GLU LEU TRP ALA HIS LYS LEU SEQRES 28 A 484 PRO HIS HIS VAL ALA ARG LYS LYS ILE PRO CYS ILE LYS SEQRES 29 A 484 GLU GLY THR GLY GLU PHE PHE LYS PRO GLU LYS PRO ASN SEQRES 30 A 484 GLY ILE LYS LEU GLU GLN PHE VAL PHE ASP VAL PHE PRO SEQRES 31 A 484 MET THR PRO LEU GLU LYS PHE ALA CYS ILE GLU VAL ARG SEQRES 32 A 484 ARG GLU ASP GLU PHE SER PRO LEU LYS ASN ALA ARG GLY SEQRES 33 A 484 THR GLY GLU ASP ASP PRO ASP THR SER LYS ARG ASP ILE SEQRES 34 A 484 MET SER GLN GLY GLN ARG TRP ILE GLU LYS ALA GLY GLY SEQRES 35 A 484 ILE VAL ILE THR GLU GLY ASP VAL VAL GLY VAL GLU VAL SEQRES 36 A 484 SER PRO LEU ILE SER TYR GLY GLY GLU GLY LEU GLU PHE SEQRES 37 A 484 LEU LYS GLY ARG GLU ILE LYS ALA PRO ALA PHE ILE GLU SEQRES 38 A 484 LYS GLU GLU MODRES 9SWY YCM B 277 CYS MODIFIED RESIDUE HET YCM B 277 10 HET GN1 B 601 19 HET CL A 601 1 HETNAM YCM S-(2-AMINO-2-OXOETHYL)-L-CYSTEINE HETNAM GN1 2-ACETAMIDO-2-DEOXY-1-O-PHOSPHONO-ALPHA-D-GLUCOPYRANOSE HETNAM CL CHLORIDE ION HETSYN YCM CYSTEINE-S-ACETAMIDE HETSYN GN1 2-(ACETYLAMINO)-2-DEOXY-1-O-PHOSPHONO-ALPHA-D- HETSYN 2 GN1 GLUCOPYRANOSE; N-ACETYL-D-GLUCOSAMINE-1-PHOSPHATE; N- HETSYN 3 GN1 ACETYL-1-O-PHOSPHONO-ALPHA-D-GLUCOSAMINE; 2-ACETAMIDO- HETSYN 4 GN1 2-DEOXY-1-O-PHOSPHONO-ALPHA-D-GLUCOSE; 2-ACETAMIDO-2- HETSYN 5 GN1 DEOXY-1-O-PHOSPHONO-D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-1- HETSYN 6 GN1 O-PHOSPHONO-GLUCOSE FORMUL 1 YCM C5 H10 N2 O3 S FORMUL 3 GN1 C8 H16 N O9 P FORMUL 4 CL CL 1- FORMUL 5 HOH *216(H2 O) HELIX 1 AA1 SER B 28 ALA B 42 1 15 HELIX 2 AA2 GLN B 44 ALA B 49 5 6 HELIX 3 AA3 PHE B 50 LEU B 54 5 5 HELIX 4 AA4 GLN B 55 SER B 67 1 13 HELIX 5 AA5 ASP B 70 ASN B 83 1 14 HELIX 6 AA6 PRO B 98 ILE B 100 5 3 HELIX 7 AA7 ASP B 109 GLY B 126 1 18 HELIX 8 AA8 GLN B 138 GLY B 143 5 6 HELIX 9 AA9 PRO B 147 PHE B 151 5 5 HELIX 10 AB1 SER B 160 ARG B 178 1 19 HELIX 11 AB2 SER B 193 HIS B 207 1 15 HELIX 12 AB3 LYS B 208 LEU B 212 5 5 HELIX 13 AB4 ASN B 213 SER B 215 5 3 HELIX 14 AB5 GLY B 248 GLY B 250 5 3 HELIX 15 AB6 GLY B 251 SER B 259 1 9 HELIX 16 AB7 GLY B 260 GLY B 269 1 10 HELIX 17 AB8 ASP B 287 GLN B 298 1 12 HELIX 18 AB9 ASP B 334 ALA B 340 1 7 HELIX 19 AC1 PHE B 363 GLU B 367 1 5 HELIX 20 AC2 SER B 368 ALA B 373 1 6 HELIX 21 AC3 HIS B 374 LEU B 376 5 3 HELIX 22 AC4 PHE B 409 THR B 417 5 9 HELIX 23 AC5 PRO B 418 GLU B 420 5 3 HELIX 24 AC6 ARG B 428 PHE B 433 1 6 HELIX 25 AC7 ASP B 446 GLY B 466 1 21 HELIX 26 AC8 LEU B 491 LYS B 495 5 5 HELIX 27 AC9 SER A 28 ALA A 42 1 15 HELIX 28 AD1 GLN A 44 ALA A 49 5 6 HELIX 29 AD2 PHE A 50 LEU A 54 5 5 HELIX 30 AD3 GLN A 55 SER A 68 1 14 HELIX 31 AD4 ASP A 70 ASN A 83 1 14 HELIX 32 AD5 PRO A 98 ILE A 100 5 3 HELIX 33 AD6 ASP A 109 GLY A 126 1 18 HELIX 34 AD7 PRO A 147 PHE A 151 5 5 HELIX 35 AD8 SER A 160 GLY A 181 1 22 HELIX 36 AD9 SER A 193 HIS A 207 1 15 HELIX 37 AE1 LYS A 208 LEU A 212 5 5 HELIX 38 AE2 ASN A 213 SER A 215 5 3 HELIX 39 AE3 GLY A 248 GLY A 250 5 3 HELIX 40 AE4 GLY A 251 SER A 259 1 9 HELIX 41 AE5 GLY A 260 GLY A 269 1 10 HELIX 42 AE6 ASP A 287 LYS A 297 1 11 HELIX 43 AE7 GLU A 329 ILE A 333 5 5 HELIX 44 AE8 ASP A 334 ALA A 340 1 7 HELIX 45 AE9 PHE A 363 SER A 368 1 6 HELIX 46 AF1 SER A 368 ALA A 373 1 6 HELIX 47 AF2 HIS A 374 LEU A 376 5 3 HELIX 48 AF3 PHE A 409 PHE A 414 5 6 HELIX 49 AF4 PRO A 418 GLU A 420 5 3 HELIX 50 AF5 ARG A 428 PHE A 433 1 6 HELIX 51 AF6 ASP A 446 ALA A 465 1 20 HELIX 52 AF7 LEU A 491 LYS A 495 5 5 SHEET 1 AA1 3 LEU B 94 GLU B 95 0 SHEET 2 AA1 3 LEU B 317 LYS B 321 -1 O GLN B 320 N GLU B 95 SHEET 3 AA1 3 LYS B 324 VAL B 328 -1 O LYS B 324 N LYS B 321 SHEET 1 AA2 8 THR B 102 SER B 104 0 SHEET 2 AA2 8 PHE B 422 GLU B 426 1 O GLU B 426 N ALA B 103 SHEET 3 AA2 8 ILE B 301 ARG B 307 1 N THR B 303 O ILE B 425 SHEET 4 AA2 8 ALA B 353 SER B 362 -1 O TYR B 360 N ALA B 302 SHEET 5 AA2 8 HIS B 272 YCM B 277 -1 N THR B 275 O HIS B 359 SHEET 6 AA2 8 VAL B 129 MET B 134 1 N MET B 134 O TYR B 276 SHEET 7 AA2 8 TRP B 188 THR B 192 1 O TYR B 189 N LEU B 133 SHEET 8 AA2 8 VAL B 217 GLU B 221 1 O ILE B 218 N VAL B 190 SHEET 1 AA3 2 VAL B 224 PRO B 226 0 SHEET 2 AA3 2 VAL B 244 PRO B 246 -1 O ALA B 245 N LEU B 225 SHEET 1 AA4 3 ILE B 228 SER B 229 0 SHEET 2 AA4 3 GLY B 403 GLU B 407 -1 O ILE B 404 N ILE B 228 SHEET 3 AA4 3 HIS B 379 LYS B 383 -1 N HIS B 379 O GLU B 407 SHEET 1 AA5 2 MET B 236 SER B 238 0 SHEET 2 AA5 2 LYS B 241 VAL B 242 -1 O LYS B 241 N GLU B 237 SHEET 1 AA6 2 CYS B 387 ILE B 388 0 SHEET 2 AA6 2 PHE B 395 PHE B 396 -1 O PHE B 396 N CYS B 387 SHEET 1 AA7 2 ILE B 468 ILE B 470 0 SHEET 2 AA7 2 GLU B 498 LYS B 500 1 O ILE B 499 N ILE B 468 SHEET 1 AA8 2 VAL B 478 VAL B 480 0 SHEET 2 AA8 2 ALA B 503 ILE B 505 1 O ILE B 505 N GLU B 479 SHEET 1 AA9 3 LEU A 94 GLU A 95 0 SHEET 2 AA9 3 LEU A 317 LYS A 321 -1 O GLN A 320 N GLU A 95 SHEET 3 AA9 3 LYS A 324 VAL A 328 -1 O VAL A 328 N LEU A 317 SHEET 1 AB1 8 THR A 102 SER A 104 0 SHEET 2 AB1 8 PHE A 422 GLU A 426 1 O GLU A 426 N ALA A 103 SHEET 3 AB1 8 ILE A 301 ARG A 307 1 N THR A 303 O ILE A 425 SHEET 4 AB1 8 ALA A 353 SER A 362 -1 O TYR A 360 N ALA A 302 SHEET 5 AB1 8 HIS A 272 CYS A 277 -1 N THR A 275 O HIS A 359 SHEET 6 AB1 8 VAL A 129 MET A 134 1 N ALA A 130 O HIS A 274 SHEET 7 AB1 8 TRP A 188 THR A 192 1 O TYR A 189 N VAL A 131 SHEET 8 AB1 8 VAL A 217 GLU A 221 1 O PHE A 220 N THR A 192 SHEET 1 AB2 2 VAL A 224 PRO A 226 0 SHEET 2 AB2 2 VAL A 244 PRO A 246 -1 O ALA A 245 N LEU A 225 SHEET 1 AB3 3 ILE A 228 SER A 229 0 SHEET 2 AB3 3 GLY A 403 GLU A 407 -1 O ILE A 404 N ILE A 228 SHEET 3 AB3 3 HIS A 379 LYS A 383 -1 N HIS A 379 O GLU A 407 SHEET 1 AB4 2 LYS A 341 ASP A 342 0 SHEET 2 AB4 2 GLN A 345 LEU A 349 -1 O VAL A 348 N ASP A 342 SHEET 1 AB5 2 CYS A 387 ILE A 388 0 SHEET 2 AB5 2 PHE A 395 PHE A 396 -1 O PHE A 396 N CYS A 387 SHEET 1 AB6 3 ILE A 468 GLY A 473 0 SHEET 2 AB6 3 GLU A 498 ILE A 505 1 O ILE A 499 N ILE A 470 SHEET 3 AB6 3 GLY A 477 VAL A 480 1 N GLU A 479 O ILE A 505 LINK C TYR B 276 N YCM B 277 1555 1555 1.33 LINK C YCM B 277 N VAL B 278 1555 1555 1.34 CISPEP 1 ALA B 501 PRO B 502 0 1.80 CISPEP 2 ALA A 501 PRO A 502 0 -0.71 CRYST1 55.834 136.865 143.081 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017910 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007306 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006989 0.00000 CONECT 1917 1927 CONECT 1927 1917 1928 CONECT 1928 1927 1929 1935 CONECT 1929 1928 1930 CONECT 1930 1929 1931 CONECT 1931 1930 1932 CONECT 1932 1931 1933 1934 CONECT 1933 1932 CONECT 1934 1932 CONECT 1935 1928 1936 1937 CONECT 1936 1935 CONECT 1937 1935 CONECT 7356 7361 7367 7370 CONECT 7357 7358 CONECT 7358 7357 7359 7360 7367 CONECT 7359 7358 CONECT 7360 7358 CONECT 7361 7356 7362 7371 CONECT 7362 7361 7363 7368 CONECT 7363 7362 7364 7369 CONECT 7364 7363 7365 7370 CONECT 7365 7364 7373 CONECT 7366 7372 CONECT 7367 7356 7358 CONECT 7368 7362 CONECT 7369 7363 CONECT 7370 7356 7364 CONECT 7371 7361 7372 CONECT 7372 7366 7371 7374 CONECT 7373 7365 CONECT 7374 7372 MASTER 363 0 3 52 47 0 0 6 7580 2 31 76 END