data_9T5K # _entry.id 9T5K # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.413 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9T5K pdb_00009t5k 10.2210/pdb9t5k/pdb WWPDB D_1292151885 ? ? EMDB EMD-55586 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2026-04-22 ? 2 'EM metadata' 1 0 2026-04-22 ? 3 FSC 1 0 2026-04-22 ? 4 'Half map' 1 0 2026-04-22 1 5 'Half map' 1 0 2026-04-22 2 6 Image 1 0 2026-04-22 ? 7 Mask 1 0 2026-04-22 1 8 'Primary map' 1 0 2026-04-22 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? 3 3 FSC repository 'Initial release' ? ? 4 4 'Half map' repository 'Initial release' ? ? 5 5 'Half map' repository 'Initial release' ? ? 6 6 Image repository 'Initial release' ? ? 7 7 Mask repository 'Initial release' ? ? 8 8 'Primary map' repository 'Initial release' ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9T5K _pdbx_database_status.recvd_initial_deposition_date 2025-11-05 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Local refinement of RNA-free assembled Langya virus N-core' _pdbx_database_related.db_id EMD-55586 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email max.renner@umu.se _pdbx_contact_author.name_first Max _pdbx_contact_author.name_last Renner _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-9885-8256 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Jayachandran, R.B.' 1 0009-0000-4969-6991 'Quignon, E.' 2 0000-0001-7929-8847 'Renner, M.' 3 0000-0001-9885-8256 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Open and closed forms of assembled henipavirus nucleoprotein suggest structural basis of genome access' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Jayachandran, R.B.' 1 0009-0000-4969-6991 primary 'Quignon, E.' 2 0000-0001-7929-8847 primary 'Renner, M.' 3 0000-0001-9885-8256 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description Nucleocapsid _entity.formula_weight 51199.469 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Nucleocapsid protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MHHHHHHGKPIPNPLLGLDSTENLYFQGIDPFTMFSTLKNETEKFREYQANLGRQGKPLASTATLTTKIIVYNPSNKSPA LRWEITKFAMRLIWSPAASHSVKVGAALTLLSAHAENPGAMIRSLVNDPDIEVVITDISEFDHGVPRLERRGEKAEQQMD SYRRILDRAPQENLFYNPEVDDLEILDSGTFLFAIATVLAQVWILVAKAVTAPDTAEESENKRWAKYVQQKRVNPDYLVS NRWITAMRSLISIDLSVRKYMVEILIEVKKSGVARGRLNEMIADIGNYIEETGMAGFFLTIKYGLEMKFPVIVINEFQAD LLTLQTLMRTYMDLGPRAPYMVLLEDSIQTKFAPGNYPLLWSFAMGVGTTLDRSMGALNINRSYLEPIYFKLGQNAARKN AGSIDRKLAEELGLTQEQANEIKEMMQEVTTQRHETNVQAREGKFNVAAGGIE ; _entity_poly.pdbx_seq_one_letter_code_can ;MHHHHHHGKPIPNPLLGLDSTENLYFQGIDPFTMFSTLKNETEKFREYQANLGRQGKPLASTATLTTKIIVYNPSNKSPA LRWEITKFAMRLIWSPAASHSVKVGAALTLLSAHAENPGAMIRSLVNDPDIEVVITDISEFDHGVPRLERRGEKAEQQMD SYRRILDRAPQENLFYNPEVDDLEILDSGTFLFAIATVLAQVWILVAKAVTAPDTAEESENKRWAKYVQQKRVNPDYLVS NRWITAMRSLISIDLSVRKYMVEILIEVKKSGVARGRLNEMIADIGNYIEETGMAGFFLTIKYGLEMKFPVIVINEFQAD LLTLQTLMRTYMDLGPRAPYMVLLEDSIQTKFAPGNYPLLWSFAMGVGTTLDRSMGALNINRSYLEPIYFKLGQNAARKN AGSIDRKLAEELGLTQEQANEIKEMMQEVTTQRHETNVQAREGKFNVAAGGIE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 GLY n 1 9 LYS n 1 10 PRO n 1 11 ILE n 1 12 PRO n 1 13 ASN n 1 14 PRO n 1 15 LEU n 1 16 LEU n 1 17 GLY n 1 18 LEU n 1 19 ASP n 1 20 SER n 1 21 THR n 1 22 GLU n 1 23 ASN n 1 24 LEU n 1 25 TYR n 1 26 PHE n 1 27 GLN n 1 28 GLY n 1 29 ILE n 1 30 ASP n 1 31 PRO n 1 32 PHE n 1 33 THR n 1 34 MET n 1 35 PHE n 1 36 SER n 1 37 THR n 1 38 LEU n 1 39 LYS n 1 40 ASN n 1 41 GLU n 1 42 THR n 1 43 GLU n 1 44 LYS n 1 45 PHE n 1 46 ARG n 1 47 GLU n 1 48 TYR n 1 49 GLN n 1 50 ALA n 1 51 ASN n 1 52 LEU n 1 53 GLY n 1 54 ARG n 1 55 GLN n 1 56 GLY n 1 57 LYS n 1 58 PRO n 1 59 LEU n 1 60 ALA n 1 61 SER n 1 62 THR n 1 63 ALA n 1 64 THR n 1 65 LEU n 1 66 THR n 1 67 THR n 1 68 LYS n 1 69 ILE n 1 70 ILE n 1 71 VAL n 1 72 TYR n 1 73 ASN n 1 74 PRO n 1 75 SER n 1 76 ASN n 1 77 LYS n 1 78 SER n 1 79 PRO n 1 80 ALA n 1 81 LEU n 1 82 ARG n 1 83 TRP n 1 84 GLU n 1 85 ILE n 1 86 THR n 1 87 LYS n 1 88 PHE n 1 89 ALA n 1 90 MET n 1 91 ARG n 1 92 LEU n 1 93 ILE n 1 94 TRP n 1 95 SER n 1 96 PRO n 1 97 ALA n 1 98 ALA n 1 99 SER n 1 100 HIS n 1 101 SER n 1 102 VAL n 1 103 LYS n 1 104 VAL n 1 105 GLY n 1 106 ALA n 1 107 ALA n 1 108 LEU n 1 109 THR n 1 110 LEU n 1 111 LEU n 1 112 SER n 1 113 ALA n 1 114 HIS n 1 115 ALA n 1 116 GLU n 1 117 ASN n 1 118 PRO n 1 119 GLY n 1 120 ALA n 1 121 MET n 1 122 ILE n 1 123 ARG n 1 124 SER n 1 125 LEU n 1 126 VAL n 1 127 ASN n 1 128 ASP n 1 129 PRO n 1 130 ASP n 1 131 ILE n 1 132 GLU n 1 133 VAL n 1 134 VAL n 1 135 ILE n 1 136 THR n 1 137 ASP n 1 138 ILE n 1 139 SER n 1 140 GLU n 1 141 PHE n 1 142 ASP n 1 143 HIS n 1 144 GLY n 1 145 VAL n 1 146 PRO n 1 147 ARG n 1 148 LEU n 1 149 GLU n 1 150 ARG n 1 151 ARG n 1 152 GLY n 1 153 GLU n 1 154 LYS n 1 155 ALA n 1 156 GLU n 1 157 GLN n 1 158 GLN n 1 159 MET n 1 160 ASP n 1 161 SER n 1 162 TYR n 1 163 ARG n 1 164 ARG n 1 165 ILE n 1 166 LEU n 1 167 ASP n 1 168 ARG n 1 169 ALA n 1 170 PRO n 1 171 GLN n 1 172 GLU n 1 173 ASN n 1 174 LEU n 1 175 PHE n 1 176 TYR n 1 177 ASN n 1 178 PRO n 1 179 GLU n 1 180 VAL n 1 181 ASP n 1 182 ASP n 1 183 LEU n 1 184 GLU n 1 185 ILE n 1 186 LEU n 1 187 ASP n 1 188 SER n 1 189 GLY n 1 190 THR n 1 191 PHE n 1 192 LEU n 1 193 PHE n 1 194 ALA n 1 195 ILE n 1 196 ALA n 1 197 THR n 1 198 VAL n 1 199 LEU n 1 200 ALA n 1 201 GLN n 1 202 VAL n 1 203 TRP n 1 204 ILE n 1 205 LEU n 1 206 VAL n 1 207 ALA n 1 208 LYS n 1 209 ALA n 1 210 VAL n 1 211 THR n 1 212 ALA n 1 213 PRO n 1 214 ASP n 1 215 THR n 1 216 ALA n 1 217 GLU n 1 218 GLU n 1 219 SER n 1 220 GLU n 1 221 ASN n 1 222 LYS n 1 223 ARG n 1 224 TRP n 1 225 ALA n 1 226 LYS n 1 227 TYR n 1 228 VAL n 1 229 GLN n 1 230 GLN n 1 231 LYS n 1 232 ARG n 1 233 VAL n 1 234 ASN n 1 235 PRO n 1 236 ASP n 1 237 TYR n 1 238 LEU n 1 239 VAL n 1 240 SER n 1 241 ASN n 1 242 ARG n 1 243 TRP n 1 244 ILE n 1 245 THR n 1 246 ALA n 1 247 MET n 1 248 ARG n 1 249 SER n 1 250 LEU n 1 251 ILE n 1 252 SER n 1 253 ILE n 1 254 ASP n 1 255 LEU n 1 256 SER n 1 257 VAL n 1 258 ARG n 1 259 LYS n 1 260 TYR n 1 261 MET n 1 262 VAL n 1 263 GLU n 1 264 ILE n 1 265 LEU n 1 266 ILE n 1 267 GLU n 1 268 VAL n 1 269 LYS n 1 270 LYS n 1 271 SER n 1 272 GLY n 1 273 VAL n 1 274 ALA n 1 275 ARG n 1 276 GLY n 1 277 ARG n 1 278 LEU n 1 279 ASN n 1 280 GLU n 1 281 MET n 1 282 ILE n 1 283 ALA n 1 284 ASP n 1 285 ILE n 1 286 GLY n 1 287 ASN n 1 288 TYR n 1 289 ILE n 1 290 GLU n 1 291 GLU n 1 292 THR n 1 293 GLY n 1 294 MET n 1 295 ALA n 1 296 GLY n 1 297 PHE n 1 298 PHE n 1 299 LEU n 1 300 THR n 1 301 ILE n 1 302 LYS n 1 303 TYR n 1 304 GLY n 1 305 LEU n 1 306 GLU n 1 307 MET n 1 308 LYS n 1 309 PHE n 1 310 PRO n 1 311 VAL n 1 312 ILE n 1 313 VAL n 1 314 ILE n 1 315 ASN n 1 316 GLU n 1 317 PHE n 1 318 GLN n 1 319 ALA n 1 320 ASP n 1 321 LEU n 1 322 LEU n 1 323 THR n 1 324 LEU n 1 325 GLN n 1 326 THR n 1 327 LEU n 1 328 MET n 1 329 ARG n 1 330 THR n 1 331 TYR n 1 332 MET n 1 333 ASP n 1 334 LEU n 1 335 GLY n 1 336 PRO n 1 337 ARG n 1 338 ALA n 1 339 PRO n 1 340 TYR n 1 341 MET n 1 342 VAL n 1 343 LEU n 1 344 LEU n 1 345 GLU n 1 346 ASP n 1 347 SER n 1 348 ILE n 1 349 GLN n 1 350 THR n 1 351 LYS n 1 352 PHE n 1 353 ALA n 1 354 PRO n 1 355 GLY n 1 356 ASN n 1 357 TYR n 1 358 PRO n 1 359 LEU n 1 360 LEU n 1 361 TRP n 1 362 SER n 1 363 PHE n 1 364 ALA n 1 365 MET n 1 366 GLY n 1 367 VAL n 1 368 GLY n 1 369 THR n 1 370 THR n 1 371 LEU n 1 372 ASP n 1 373 ARG n 1 374 SER n 1 375 MET n 1 376 GLY n 1 377 ALA n 1 378 LEU n 1 379 ASN n 1 380 ILE n 1 381 ASN n 1 382 ARG n 1 383 SER n 1 384 TYR n 1 385 LEU n 1 386 GLU n 1 387 PRO n 1 388 ILE n 1 389 TYR n 1 390 PHE n 1 391 LYS n 1 392 LEU n 1 393 GLY n 1 394 GLN n 1 395 ASN n 1 396 ALA n 1 397 ALA n 1 398 ARG n 1 399 LYS n 1 400 ASN n 1 401 ALA n 1 402 GLY n 1 403 SER n 1 404 ILE n 1 405 ASP n 1 406 ARG n 1 407 LYS n 1 408 LEU n 1 409 ALA n 1 410 GLU n 1 411 GLU n 1 412 LEU n 1 413 GLY n 1 414 LEU n 1 415 THR n 1 416 GLN n 1 417 GLU n 1 418 GLN n 1 419 ALA n 1 420 ASN n 1 421 GLU n 1 422 ILE n 1 423 LYS n 1 424 GLU n 1 425 MET n 1 426 MET n 1 427 GLN n 1 428 GLU n 1 429 VAL n 1 430 THR n 1 431 THR n 1 432 GLN n 1 433 ARG n 1 434 HIS n 1 435 GLU n 1 436 THR n 1 437 ASN n 1 438 VAL n 1 439 GLN n 1 440 ALA n 1 441 ARG n 1 442 GLU n 1 443 GLY n 1 444 LYS n 1 445 PHE n 1 446 ASN n 1 447 VAL n 1 448 ALA n 1 449 ALA n 1 450 GLY n 1 451 GLY n 1 452 ILE n 1 453 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 453 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'Isolate SDQD_H1801' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Langya virus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2971765 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -32 ? ? ? A . n A 1 2 HIS 2 -31 ? ? ? A . n A 1 3 HIS 3 -30 ? ? ? A . n A 1 4 HIS 4 -29 ? ? ? A . n A 1 5 HIS 5 -28 ? ? ? A . n A 1 6 HIS 6 -27 ? ? ? A . n A 1 7 HIS 7 -26 ? ? ? A . n A 1 8 GLY 8 -25 ? ? ? A . n A 1 9 LYS 9 -24 ? ? ? A . n A 1 10 PRO 10 -23 ? ? ? A . n A 1 11 ILE 11 -22 ? ? ? A . n A 1 12 PRO 12 -21 ? ? ? A . n A 1 13 ASN 13 -20 ? ? ? A . n A 1 14 PRO 14 -19 ? ? ? A . n A 1 15 LEU 15 -18 ? ? ? A . n A 1 16 LEU 16 -17 ? ? ? A . n A 1 17 GLY 17 -16 ? ? ? A . n A 1 18 LEU 18 -15 ? ? ? A . n A 1 19 ASP 19 -14 ? ? ? A . n A 1 20 SER 20 -13 ? ? ? A . n A 1 21 THR 21 -12 ? ? ? A . n A 1 22 GLU 22 -11 ? ? ? A . n A 1 23 ASN 23 -10 ? ? ? A . n A 1 24 LEU 24 -9 ? ? ? A . n A 1 25 TYR 25 -8 ? ? ? A . n A 1 26 PHE 26 -7 ? ? ? A . n A 1 27 GLN 27 -6 ? ? ? A . n A 1 28 GLY 28 -5 ? ? ? A . n A 1 29 ILE 29 -4 ? ? ? A . n A 1 30 ASP 30 -3 ? ? ? A . n A 1 31 PRO 31 -2 ? ? ? A . n A 1 32 PHE 32 -1 ? ? ? A . n A 1 33 THR 33 0 ? ? ? A . n A 1 34 MET 34 1 ? ? ? A . n A 1 35 PHE 35 2 2 PHE PHE A . n A 1 36 SER 36 3 3 SER SER A . n A 1 37 THR 37 4 4 THR THR A . n A 1 38 LEU 38 5 5 LEU LEU A . n A 1 39 LYS 39 6 6 LYS LYS A . n A 1 40 ASN 40 7 7 ASN ASN A . n A 1 41 GLU 41 8 8 GLU GLU A . n A 1 42 THR 42 9 9 THR THR A . n A 1 43 GLU 43 10 10 GLU GLU A . n A 1 44 LYS 44 11 11 LYS LYS A . n A 1 45 PHE 45 12 12 PHE PHE A . n A 1 46 ARG 46 13 13 ARG ARG A . n A 1 47 GLU 47 14 14 GLU GLU A . n A 1 48 TYR 48 15 15 TYR TYR A . n A 1 49 GLN 49 16 16 GLN GLN A . n A 1 50 ALA 50 17 17 ALA ALA A . n A 1 51 ASN 51 18 18 ASN ASN A . n A 1 52 LEU 52 19 19 LEU LEU A . n A 1 53 GLY 53 20 20 GLY GLY A . n A 1 54 ARG 54 21 21 ARG ARG A . n A 1 55 GLN 55 22 22 GLN GLN A . n A 1 56 GLY 56 23 23 GLY GLY A . n A 1 57 LYS 57 24 24 LYS LYS A . n A 1 58 PRO 58 25 25 PRO PRO A . n A 1 59 LEU 59 26 26 LEU LEU A . n A 1 60 ALA 60 27 27 ALA ALA A . n A 1 61 SER 61 28 28 SER SER A . n A 1 62 THR 62 29 29 THR THR A . n A 1 63 ALA 63 30 30 ALA ALA A . n A 1 64 THR 64 31 31 THR THR A . n A 1 65 LEU 65 32 32 LEU LEU A . n A 1 66 THR 66 33 33 THR THR A . n A 1 67 THR 67 34 34 THR THR A . n A 1 68 LYS 68 35 35 LYS LYS A . n A 1 69 ILE 69 36 36 ILE ILE A . n A 1 70 ILE 70 37 37 ILE ILE A . n A 1 71 VAL 71 38 38 VAL VAL A . n A 1 72 TYR 72 39 39 TYR TYR A . n A 1 73 ASN 73 40 40 ASN ASN A . n A 1 74 PRO 74 41 41 PRO PRO A . n A 1 75 SER 75 42 42 SER SER A . n A 1 76 ASN 76 43 43 ASN ASN A . n A 1 77 LYS 77 44 44 LYS LYS A . n A 1 78 SER 78 45 45 SER SER A . n A 1 79 PRO 79 46 46 PRO PRO A . n A 1 80 ALA 80 47 47 ALA ALA A . n A 1 81 LEU 81 48 48 LEU LEU A . n A 1 82 ARG 82 49 49 ARG ARG A . n A 1 83 TRP 83 50 50 TRP TRP A . n A 1 84 GLU 84 51 51 GLU GLU A . n A 1 85 ILE 85 52 52 ILE ILE A . n A 1 86 THR 86 53 53 THR THR A . n A 1 87 LYS 87 54 54 LYS LYS A . n A 1 88 PHE 88 55 55 PHE PHE A . n A 1 89 ALA 89 56 56 ALA ALA A . n A 1 90 MET 90 57 57 MET MET A . n A 1 91 ARG 91 58 58 ARG ARG A . n A 1 92 LEU 92 59 59 LEU LEU A . n A 1 93 ILE 93 60 60 ILE ILE A . n A 1 94 TRP 94 61 61 TRP TRP A . n A 1 95 SER 95 62 62 SER SER A . n A 1 96 PRO 96 63 63 PRO PRO A . n A 1 97 ALA 97 64 64 ALA ALA A . n A 1 98 ALA 98 65 65 ALA ALA A . n A 1 99 SER 99 66 66 SER SER A . n A 1 100 HIS 100 67 67 HIS HIS A . n A 1 101 SER 101 68 68 SER SER A . n A 1 102 VAL 102 69 69 VAL VAL A . n A 1 103 LYS 103 70 70 LYS LYS A . n A 1 104 VAL 104 71 71 VAL VAL A . n A 1 105 GLY 105 72 72 GLY GLY A . n A 1 106 ALA 106 73 73 ALA ALA A . n A 1 107 ALA 107 74 74 ALA ALA A . n A 1 108 LEU 108 75 75 LEU LEU A . n A 1 109 THR 109 76 76 THR THR A . n A 1 110 LEU 110 77 77 LEU LEU A . n A 1 111 LEU 111 78 78 LEU LEU A . n A 1 112 SER 112 79 79 SER SER A . n A 1 113 ALA 113 80 80 ALA ALA A . n A 1 114 HIS 114 81 81 HIS HIS A . n A 1 115 ALA 115 82 82 ALA ALA A . n A 1 116 GLU 116 83 83 GLU GLU A . n A 1 117 ASN 117 84 84 ASN ASN A . n A 1 118 PRO 118 85 85 PRO PRO A . n A 1 119 GLY 119 86 86 GLY GLY A . n A 1 120 ALA 120 87 87 ALA ALA A . n A 1 121 MET 121 88 88 MET MET A . n A 1 122 ILE 122 89 89 ILE ILE A . n A 1 123 ARG 123 90 90 ARG ARG A . n A 1 124 SER 124 91 91 SER SER A . n A 1 125 LEU 125 92 92 LEU LEU A . n A 1 126 VAL 126 93 93 VAL VAL A . n A 1 127 ASN 127 94 94 ASN ASN A . n A 1 128 ASP 128 95 95 ASP ASP A . n A 1 129 PRO 129 96 96 PRO PRO A . n A 1 130 ASP 130 97 97 ASP ASP A . n A 1 131 ILE 131 98 98 ILE ILE A . n A 1 132 GLU 132 99 99 GLU GLU A . n A 1 133 VAL 133 100 100 VAL VAL A . n A 1 134 VAL 134 101 101 VAL VAL A . n A 1 135 ILE 135 102 102 ILE ILE A . n A 1 136 THR 136 103 103 THR THR A . n A 1 137 ASP 137 104 104 ASP ASP A . n A 1 138 ILE 138 105 105 ILE ILE A . n A 1 139 SER 139 106 106 SER SER A . n A 1 140 GLU 140 107 107 GLU GLU A . n A 1 141 PHE 141 108 108 PHE PHE A . n A 1 142 ASP 142 109 109 ASP ASP A . n A 1 143 HIS 143 110 110 HIS HIS A . n A 1 144 GLY 144 111 111 GLY GLY A . n A 1 145 VAL 145 112 112 VAL VAL A . n A 1 146 PRO 146 113 113 PRO PRO A . n A 1 147 ARG 147 114 114 ARG ARG A . n A 1 148 LEU 148 115 115 LEU LEU A . n A 1 149 GLU 149 116 116 GLU GLU A . n A 1 150 ARG 150 117 ? ? ? A . n A 1 151 ARG 151 118 ? ? ? A . n A 1 152 GLY 152 119 ? ? ? A . n A 1 153 GLU 153 120 ? ? ? A . n A 1 154 LYS 154 121 ? ? ? A . n A 1 155 ALA 155 122 122 ALA ALA A . n A 1 156 GLU 156 123 123 GLU GLU A . n A 1 157 GLN 157 124 124 GLN GLN A . n A 1 158 GLN 158 125 125 GLN GLN A . n A 1 159 MET 159 126 126 MET MET A . n A 1 160 ASP 160 127 127 ASP ASP A . n A 1 161 SER 161 128 128 SER SER A . n A 1 162 TYR 162 129 129 TYR TYR A . n A 1 163 ARG 163 130 130 ARG ARG A . n A 1 164 ARG 164 131 131 ARG ARG A . n A 1 165 ILE 165 132 132 ILE ILE A . n A 1 166 LEU 166 133 133 LEU LEU A . n A 1 167 ASP 167 134 134 ASP ASP A . n A 1 168 ARG 168 135 135 ARG ARG A . n A 1 169 ALA 169 136 136 ALA ALA A . n A 1 170 PRO 170 137 137 PRO PRO A . n A 1 171 GLN 171 138 138 GLN GLN A . n A 1 172 GLU 172 139 139 GLU GLU A . n A 1 173 ASN 173 140 140 ASN ASN A . n A 1 174 LEU 174 141 141 LEU LEU A . n A 1 175 PHE 175 142 142 PHE PHE A . n A 1 176 TYR 176 143 143 TYR TYR A . n A 1 177 ASN 177 144 144 ASN ASN A . n A 1 178 PRO 178 145 145 PRO PRO A . n A 1 179 GLU 179 146 146 GLU GLU A . n A 1 180 VAL 180 147 147 VAL VAL A . n A 1 181 ASP 181 148 148 ASP ASP A . n A 1 182 ASP 182 149 149 ASP ASP A . n A 1 183 LEU 183 150 150 LEU LEU A . n A 1 184 GLU 184 151 151 GLU GLU A . n A 1 185 ILE 185 152 152 ILE ILE A . n A 1 186 LEU 186 153 153 LEU LEU A . n A 1 187 ASP 187 154 154 ASP ASP A . n A 1 188 SER 188 155 155 SER SER A . n A 1 189 GLY 189 156 156 GLY GLY A . n A 1 190 THR 190 157 157 THR THR A . n A 1 191 PHE 191 158 158 PHE PHE A . n A 1 192 LEU 192 159 159 LEU LEU A . n A 1 193 PHE 193 160 160 PHE PHE A . n A 1 194 ALA 194 161 161 ALA ALA A . n A 1 195 ILE 195 162 162 ILE ILE A . n A 1 196 ALA 196 163 163 ALA ALA A . n A 1 197 THR 197 164 164 THR THR A . n A 1 198 VAL 198 165 165 VAL VAL A . n A 1 199 LEU 199 166 166 LEU LEU A . n A 1 200 ALA 200 167 167 ALA ALA A . n A 1 201 GLN 201 168 168 GLN GLN A . n A 1 202 VAL 202 169 169 VAL VAL A . n A 1 203 TRP 203 170 170 TRP TRP A . n A 1 204 ILE 204 171 171 ILE ILE A . n A 1 205 LEU 205 172 172 LEU LEU A . n A 1 206 VAL 206 173 173 VAL VAL A . n A 1 207 ALA 207 174 174 ALA ALA A . n A 1 208 LYS 208 175 175 LYS LYS A . n A 1 209 ALA 209 176 176 ALA ALA A . n A 1 210 VAL 210 177 177 VAL VAL A . n A 1 211 THR 211 178 178 THR THR A . n A 1 212 ALA 212 179 ? ? ? A . n A 1 213 PRO 213 180 ? ? ? A . n A 1 214 ASP 214 181 ? ? ? A . n A 1 215 THR 215 182 ? ? ? A . n A 1 216 ALA 216 183 ? ? ? A . n A 1 217 GLU 217 184 ? ? ? A . n A 1 218 GLU 218 185 ? ? ? A . n A 1 219 SER 219 186 ? ? ? A . n A 1 220 GLU 220 187 ? ? ? A . n A 1 221 ASN 221 188 188 ASN ASN A . n A 1 222 LYS 222 189 189 LYS LYS A . n A 1 223 ARG 223 190 190 ARG ARG A . n A 1 224 TRP 224 191 191 TRP TRP A . n A 1 225 ALA 225 192 192 ALA ALA A . n A 1 226 LYS 226 193 193 LYS LYS A . n A 1 227 TYR 227 194 194 TYR TYR A . n A 1 228 VAL 228 195 195 VAL VAL A . n A 1 229 GLN 229 196 196 GLN GLN A . n A 1 230 GLN 230 197 197 GLN GLN A . n A 1 231 LYS 231 198 198 LYS LYS A . n A 1 232 ARG 232 199 199 ARG ARG A . n A 1 233 VAL 233 200 200 VAL VAL A . n A 1 234 ASN 234 201 201 ASN ASN A . n A 1 235 PRO 235 202 202 PRO PRO A . n A 1 236 ASP 236 203 203 ASP ASP A . n A 1 237 TYR 237 204 204 TYR TYR A . n A 1 238 LEU 238 205 205 LEU LEU A . n A 1 239 VAL 239 206 206 VAL VAL A . n A 1 240 SER 240 207 207 SER SER A . n A 1 241 ASN 241 208 208 ASN ASN A . n A 1 242 ARG 242 209 209 ARG ARG A . n A 1 243 TRP 243 210 210 TRP TRP A . n A 1 244 ILE 244 211 211 ILE ILE A . n A 1 245 THR 245 212 212 THR THR A . n A 1 246 ALA 246 213 213 ALA ALA A . n A 1 247 MET 247 214 214 MET MET A . n A 1 248 ARG 248 215 215 ARG ARG A . n A 1 249 SER 249 216 216 SER SER A . n A 1 250 LEU 250 217 217 LEU LEU A . n A 1 251 ILE 251 218 218 ILE ILE A . n A 1 252 SER 252 219 219 SER SER A . n A 1 253 ILE 253 220 220 ILE ILE A . n A 1 254 ASP 254 221 221 ASP ASP A . n A 1 255 LEU 255 222 222 LEU LEU A . n A 1 256 SER 256 223 223 SER SER A . n A 1 257 VAL 257 224 224 VAL VAL A . n A 1 258 ARG 258 225 225 ARG ARG A . n A 1 259 LYS 259 226 226 LYS LYS A . n A 1 260 TYR 260 227 227 TYR TYR A . n A 1 261 MET 261 228 228 MET MET A . n A 1 262 VAL 262 229 229 VAL VAL A . n A 1 263 GLU 263 230 230 GLU GLU A . n A 1 264 ILE 264 231 231 ILE ILE A . n A 1 265 LEU 265 232 232 LEU LEU A . n A 1 266 ILE 266 233 233 ILE ILE A . n A 1 267 GLU 267 234 234 GLU GLU A . n A 1 268 VAL 268 235 235 VAL VAL A . n A 1 269 LYS 269 236 236 LYS LYS A . n A 1 270 LYS 270 237 237 LYS LYS A . n A 1 271 SER 271 238 238 SER SER A . n A 1 272 GLY 272 239 239 GLY GLY A . n A 1 273 VAL 273 240 240 VAL VAL A . n A 1 274 ALA 274 241 241 ALA ALA A . n A 1 275 ARG 275 242 242 ARG ARG A . n A 1 276 GLY 276 243 243 GLY GLY A . n A 1 277 ARG 277 244 244 ARG ARG A . n A 1 278 LEU 278 245 245 LEU LEU A . n A 1 279 ASN 279 246 246 ASN ASN A . n A 1 280 GLU 280 247 247 GLU GLU A . n A 1 281 MET 281 248 248 MET MET A . n A 1 282 ILE 282 249 249 ILE ILE A . n A 1 283 ALA 283 250 250 ALA ALA A . n A 1 284 ASP 284 251 251 ASP ASP A . n A 1 285 ILE 285 252 252 ILE ILE A . n A 1 286 GLY 286 253 253 GLY GLY A . n A 1 287 ASN 287 254 254 ASN ASN A . n A 1 288 TYR 288 255 255 TYR TYR A . n A 1 289 ILE 289 256 256 ILE ILE A . n A 1 290 GLU 290 257 257 GLU GLU A . n A 1 291 GLU 291 258 258 GLU GLU A . n A 1 292 THR 292 259 259 THR THR A . n A 1 293 GLY 293 260 260 GLY GLY A . n A 1 294 MET 294 261 261 MET MET A . n A 1 295 ALA 295 262 262 ALA ALA A . n A 1 296 GLY 296 263 263 GLY GLY A . n A 1 297 PHE 297 264 264 PHE PHE A . n A 1 298 PHE 298 265 265 PHE PHE A . n A 1 299 LEU 299 266 266 LEU LEU A . n A 1 300 THR 300 267 267 THR THR A . n A 1 301 ILE 301 268 268 ILE ILE A . n A 1 302 LYS 302 269 269 LYS LYS A . n A 1 303 TYR 303 270 270 TYR TYR A . n A 1 304 GLY 304 271 271 GLY GLY A . n A 1 305 LEU 305 272 272 LEU LEU A . n A 1 306 GLU 306 273 273 GLU GLU A . n A 1 307 MET 307 274 274 MET MET A . n A 1 308 LYS 308 275 275 LYS LYS A . n A 1 309 PHE 309 276 276 PHE PHE A . n A 1 310 PRO 310 277 277 PRO PRO A . n A 1 311 VAL 311 278 278 VAL VAL A . n A 1 312 ILE 312 279 279 ILE ILE A . n A 1 313 VAL 313 280 280 VAL VAL A . n A 1 314 ILE 314 281 281 ILE ILE A . n A 1 315 ASN 315 282 282 ASN ASN A . n A 1 316 GLU 316 283 283 GLU GLU A . n A 1 317 PHE 317 284 284 PHE PHE A . n A 1 318 GLN 318 285 285 GLN GLN A . n A 1 319 ALA 319 286 286 ALA ALA A . n A 1 320 ASP 320 287 287 ASP ASP A . n A 1 321 LEU 321 288 288 LEU LEU A . n A 1 322 LEU 322 289 289 LEU LEU A . n A 1 323 THR 323 290 290 THR THR A . n A 1 324 LEU 324 291 291 LEU LEU A . n A 1 325 GLN 325 292 292 GLN GLN A . n A 1 326 THR 326 293 293 THR THR A . n A 1 327 LEU 327 294 294 LEU LEU A . n A 1 328 MET 328 295 295 MET MET A . n A 1 329 ARG 329 296 296 ARG ARG A . n A 1 330 THR 330 297 297 THR THR A . n A 1 331 TYR 331 298 298 TYR TYR A . n A 1 332 MET 332 299 299 MET MET A . n A 1 333 ASP 333 300 300 ASP ASP A . n A 1 334 LEU 334 301 301 LEU LEU A . n A 1 335 GLY 335 302 302 GLY GLY A . n A 1 336 PRO 336 303 303 PRO PRO A . n A 1 337 ARG 337 304 304 ARG ARG A . n A 1 338 ALA 338 305 305 ALA ALA A . n A 1 339 PRO 339 306 306 PRO PRO A . n A 1 340 TYR 340 307 307 TYR TYR A . n A 1 341 MET 341 308 308 MET MET A . n A 1 342 VAL 342 309 309 VAL VAL A . n A 1 343 LEU 343 310 310 LEU LEU A . n A 1 344 LEU 344 311 311 LEU LEU A . n A 1 345 GLU 345 312 312 GLU GLU A . n A 1 346 ASP 346 313 313 ASP ASP A . n A 1 347 SER 347 314 314 SER SER A . n A 1 348 ILE 348 315 315 ILE ILE A . n A 1 349 GLN 349 316 316 GLN GLN A . n A 1 350 THR 350 317 317 THR THR A . n A 1 351 LYS 351 318 318 LYS LYS A . n A 1 352 PHE 352 319 319 PHE PHE A . n A 1 353 ALA 353 320 320 ALA ALA A . n A 1 354 PRO 354 321 321 PRO PRO A . n A 1 355 GLY 355 322 322 GLY GLY A . n A 1 356 ASN 356 323 323 ASN ASN A . n A 1 357 TYR 357 324 324 TYR TYR A . n A 1 358 PRO 358 325 325 PRO PRO A . n A 1 359 LEU 359 326 326 LEU LEU A . n A 1 360 LEU 360 327 327 LEU LEU A . n A 1 361 TRP 361 328 328 TRP TRP A . n A 1 362 SER 362 329 329 SER SER A . n A 1 363 PHE 363 330 330 PHE PHE A . n A 1 364 ALA 364 331 331 ALA ALA A . n A 1 365 MET 365 332 332 MET MET A . n A 1 366 GLY 366 333 333 GLY GLY A . n A 1 367 VAL 367 334 334 VAL VAL A . n A 1 368 GLY 368 335 335 GLY GLY A . n A 1 369 THR 369 336 336 THR THR A . n A 1 370 THR 370 337 337 THR THR A . n A 1 371 LEU 371 338 338 LEU LEU A . n A 1 372 ASP 372 339 339 ASP ASP A . n A 1 373 ARG 373 340 340 ARG ARG A . n A 1 374 SER 374 341 341 SER SER A . n A 1 375 MET 375 342 342 MET MET A . n A 1 376 GLY 376 343 343 GLY GLY A . n A 1 377 ALA 377 344 ? ? ? A . n A 1 378 LEU 378 345 ? ? ? A . n A 1 379 ASN 379 346 346 ASN ASN A . n A 1 380 ILE 380 347 347 ILE ILE A . n A 1 381 ASN 381 348 348 ASN ASN A . n A 1 382 ARG 382 349 349 ARG ARG A . n A 1 383 SER 383 350 350 SER SER A . n A 1 384 TYR 384 351 351 TYR TYR A . n A 1 385 LEU 385 352 352 LEU LEU A . n A 1 386 GLU 386 353 353 GLU GLU A . n A 1 387 PRO 387 354 354 PRO PRO A . n A 1 388 ILE 388 355 355 ILE ILE A . n A 1 389 TYR 389 356 356 TYR TYR A . n A 1 390 PHE 390 357 357 PHE PHE A . n A 1 391 LYS 391 358 358 LYS LYS A . n A 1 392 LEU 392 359 359 LEU LEU A . n A 1 393 GLY 393 360 360 GLY GLY A . n A 1 394 GLN 394 361 361 GLN GLN A . n A 1 395 ASN 395 362 362 ASN ASN A . n A 1 396 ALA 396 363 363 ALA ALA A . n A 1 397 ALA 397 364 364 ALA ALA A . n A 1 398 ARG 398 365 365 ARG ARG A . n A 1 399 LYS 399 366 366 LYS LYS A . n A 1 400 ASN 400 367 367 ASN ASN A . n A 1 401 ALA 401 368 368 ALA ALA A . n A 1 402 GLY 402 369 369 GLY GLY A . n A 1 403 SER 403 370 370 SER SER A . n A 1 404 ILE 404 371 371 ILE ILE A . n A 1 405 ASP 405 372 372 ASP ASP A . n A 1 406 ARG 406 373 373 ARG ARG A . n A 1 407 LYS 407 374 374 LYS LYS A . n A 1 408 LEU 408 375 375 LEU LEU A . n A 1 409 ALA 409 376 376 ALA ALA A . n A 1 410 GLU 410 377 377 GLU GLU A . n A 1 411 GLU 411 378 378 GLU GLU A . n A 1 412 LEU 412 379 379 LEU LEU A . n A 1 413 GLY 413 380 380 GLY GLY A . n A 1 414 LEU 414 381 381 LEU LEU A . n A 1 415 THR 415 382 382 THR THR A . n A 1 416 GLN 416 383 383 GLN GLN A . n A 1 417 GLU 417 384 384 GLU GLU A . n A 1 418 GLN 418 385 385 GLN GLN A . n A 1 419 ALA 419 386 386 ALA ALA A . n A 1 420 ASN 420 387 387 ASN ASN A . n A 1 421 GLU 421 388 388 GLU GLU A . n A 1 422 ILE 422 389 389 ILE ILE A . n A 1 423 LYS 423 390 390 LYS LYS A . n A 1 424 GLU 424 391 391 GLU GLU A . n A 1 425 MET 425 392 392 MET MET A . n A 1 426 MET 426 393 393 MET MET A . n A 1 427 GLN 427 394 394 GLN GLN A . n A 1 428 GLU 428 395 395 GLU GLU A . n A 1 429 VAL 429 396 396 VAL VAL A . n A 1 430 THR 430 397 397 THR THR A . n A 1 431 THR 431 398 398 THR THR A . n A 1 432 GLN 432 399 ? ? ? A . n A 1 433 ARG 433 400 ? ? ? A . n A 1 434 HIS 434 401 ? ? ? A . n A 1 435 GLU 435 402 ? ? ? A . n A 1 436 THR 436 403 ? ? ? A . n A 1 437 ASN 437 404 ? ? ? A . n A 1 438 VAL 438 405 ? ? ? A . n A 1 439 GLN 439 406 ? ? ? A . n A 1 440 ALA 440 407 ? ? ? A . n A 1 441 ARG 441 408 ? ? ? A . n A 1 442 GLU 442 409 ? ? ? A . n A 1 443 GLY 443 410 ? ? ? A . n A 1 444 LYS 444 411 ? ? ? A . n A 1 445 PHE 445 412 ? ? ? A . n A 1 446 ASN 446 413 ? ? ? A . n A 1 447 VAL 447 414 ? ? ? A . n A 1 448 ALA 448 415 ? ? ? A . n A 1 449 ALA 449 416 ? ? ? A . n A 1 450 GLY 450 417 ? ? ? A . n A 1 451 GLY 451 418 ? ? ? A . n A 1 452 ILE 452 419 ? ? ? A . n A 1 453 GLU 453 420 ? ? ? A . n # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9T5K _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9T5K _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9T5K _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9T5K _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.60 _refine.ls_d_res_low ? _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work ? _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'REAL-SPACE (WEIGHTED MAP SUM AT ATOM CENTERS)' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_Zscore _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.002 ? 3085 ? f_bond_d ? ? ? 'ELECTRON MICROSCOPY' ? 0.391 ? 4174 ? f_angle_d ? ? ? 'ELECTRON MICROSCOPY' ? 3.334 ? 413 ? f_dihedral_angle_d ? ? ? 'ELECTRON MICROSCOPY' ? 0.037 ? 477 ? f_chiral_restr ? ? ? 'ELECTRON MICROSCOPY' ? 0.003 ? 531 ? f_plane_restr ? ? ? # _struct.entry_id 9T5K _struct.title 'Local refinement of RNA-free assembled Langya virus N-core' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9T5K _struct_keywords.text 'Henipavirus, Langya virus, cryo-EM, nucleocapsid, nucleoprotein, RNA, VIRAL PROTEIN' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A0AAX3C958_9MONO _struct_ref.pdbx_db_accession A0AAX3C958 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MFSTLKNETEKFREYQANLGRQGKPLASTATLTTKIIVYNPSNKSPALRWEITKFAMRLIWSPAASHSVKVGAALTLLSA HAENPGAMIRSLVNDPDIEVVITDISEFDHGVPRLERRGEKAEQQMDSYRRILDRAPQENLFYNPEVDDLEILDSGTFLF AIATVLAQVWILVAKAVTAPDTAEESENKRWAKYVQQKRVNPDYLVSNRWITAMRSLISIDLSVRKYMVEILIEVKKSGV ARGRLNEMIADIGNYIEETGMAGFFLTIKYGLEMKFPVIVINEFQADLLTLQTLMRTYMDLGPRAPYMVLLEDSIQTKFA PGNYPLLWSFAMGVGTTLDRSMGALNINRSYLEPIYFKLGQNAARKNAGSIDRKLAEELGLTQEQANEIKEMMQEVTTQR HETNVQAREGKFNVAAGGIE ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 9T5K _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 34 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 453 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A0AAX3C958 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 420 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 420 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 9T5K MET A 1 ? UNP A0AAX3C958 ? ? 'initiating methionine' -32 1 1 9T5K HIS A 2 ? UNP A0AAX3C958 ? ? 'expression tag' -31 2 1 9T5K HIS A 3 ? UNP A0AAX3C958 ? ? 'expression tag' -30 3 1 9T5K HIS A 4 ? UNP A0AAX3C958 ? ? 'expression tag' -29 4 1 9T5K HIS A 5 ? UNP A0AAX3C958 ? ? 'expression tag' -28 5 1 9T5K HIS A 6 ? UNP A0AAX3C958 ? ? 'expression tag' -27 6 1 9T5K HIS A 7 ? UNP A0AAX3C958 ? ? 'expression tag' -26 7 1 9T5K GLY A 8 ? UNP A0AAX3C958 ? ? 'expression tag' -25 8 1 9T5K LYS A 9 ? UNP A0AAX3C958 ? ? 'expression tag' -24 9 1 9T5K PRO A 10 ? UNP A0AAX3C958 ? ? 'expression tag' -23 10 1 9T5K ILE A 11 ? UNP A0AAX3C958 ? ? 'expression tag' -22 11 1 9T5K PRO A 12 ? UNP A0AAX3C958 ? ? 'expression tag' -21 12 1 9T5K ASN A 13 ? UNP A0AAX3C958 ? ? 'expression tag' -20 13 1 9T5K PRO A 14 ? UNP A0AAX3C958 ? ? 'expression tag' -19 14 1 9T5K LEU A 15 ? UNP A0AAX3C958 ? ? 'expression tag' -18 15 1 9T5K LEU A 16 ? UNP A0AAX3C958 ? ? 'expression tag' -17 16 1 9T5K GLY A 17 ? UNP A0AAX3C958 ? ? 'expression tag' -16 17 1 9T5K LEU A 18 ? UNP A0AAX3C958 ? ? 'expression tag' -15 18 1 9T5K ASP A 19 ? UNP A0AAX3C958 ? ? 'expression tag' -14 19 1 9T5K SER A 20 ? UNP A0AAX3C958 ? ? 'expression tag' -13 20 1 9T5K THR A 21 ? UNP A0AAX3C958 ? ? 'expression tag' -12 21 1 9T5K GLU A 22 ? UNP A0AAX3C958 ? ? 'expression tag' -11 22 1 9T5K ASN A 23 ? UNP A0AAX3C958 ? ? 'expression tag' -10 23 1 9T5K LEU A 24 ? UNP A0AAX3C958 ? ? 'expression tag' -9 24 1 9T5K TYR A 25 ? UNP A0AAX3C958 ? ? 'expression tag' -8 25 1 9T5K PHE A 26 ? UNP A0AAX3C958 ? ? 'expression tag' -7 26 1 9T5K GLN A 27 ? UNP A0AAX3C958 ? ? 'expression tag' -6 27 1 9T5K GLY A 28 ? UNP A0AAX3C958 ? ? 'expression tag' -5 28 1 9T5K ILE A 29 ? UNP A0AAX3C958 ? ? 'expression tag' -4 29 1 9T5K ASP A 30 ? UNP A0AAX3C958 ? ? 'expression tag' -3 30 1 9T5K PRO A 31 ? UNP A0AAX3C958 ? ? 'expression tag' -2 31 1 9T5K PHE A 32 ? UNP A0AAX3C958 ? ? 'expression tag' -1 32 1 9T5K THR A 33 ? UNP A0AAX3C958 ? ? 'expression tag' 0 33 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0 _pdbx_struct_oper_list.matrix[1][2] 0.0 _pdbx_struct_oper_list.matrix[1][3] 0.0 _pdbx_struct_oper_list.vector[1] 0.0 _pdbx_struct_oper_list.matrix[2][1] 0.0 _pdbx_struct_oper_list.matrix[2][2] 1.0 _pdbx_struct_oper_list.matrix[2][3] 0.0 _pdbx_struct_oper_list.vector[2] 0.0 _pdbx_struct_oper_list.matrix[3][1] 0.0 _pdbx_struct_oper_list.matrix[3][2] 0.0 _pdbx_struct_oper_list.matrix[3][3] 1.0 _pdbx_struct_oper_list.vector[3] 0.0 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 37 ? ASN A 51 ? THR A 4 ASN A 18 1 ? 15 HELX_P HELX_P2 AA2 SER A 78 ? TRP A 94 ? SER A 45 TRP A 61 1 ? 17 HELX_P HELX_P3 AA3 SER A 99 ? SER A 112 ? SER A 66 SER A 79 1 ? 14 HELX_P HELX_P4 AA4 ASN A 117 ? VAL A 126 ? ASN A 84 VAL A 93 1 ? 10 HELX_P HELX_P5 AA5 GLN A 157 ? ALA A 169 ? GLN A 124 ALA A 136 1 ? 13 HELX_P HELX_P6 AA6 ASN A 177 ? ASP A 182 ? ASN A 144 ASP A 149 1 ? 6 HELX_P HELX_P7 AA7 ASP A 187 ? VAL A 210 ? ASP A 154 VAL A 177 1 ? 24 HELX_P HELX_P8 AA8 LYS A 222 ? GLN A 230 ? LYS A 189 GLN A 197 1 ? 9 HELX_P HELX_P9 AA9 ASN A 234 ? LEU A 238 ? ASN A 201 LEU A 205 5 ? 5 HELX_P HELX_P10 AB1 SER A 240 ? ASP A 254 ? SER A 207 ASP A 221 1 ? 15 HELX_P HELX_P11 AB2 LEU A 255 ? LYS A 270 ? LEU A 222 LYS A 237 1 ? 16 HELX_P HELX_P12 AB3 GLY A 276 ? THR A 292 ? GLY A 243 THR A 259 1 ? 17 HELX_P HELX_P13 AB4 MET A 294 ? LEU A 305 ? MET A 261 LEU A 272 1 ? 12 HELX_P HELX_P14 AB5 PHE A 309 ? GLU A 316 ? PHE A 276 GLU A 283 5 ? 8 HELX_P HELX_P15 AB6 PHE A 317 ? MET A 332 ? PHE A 284 MET A 299 1 ? 16 HELX_P HELX_P16 AB7 ASP A 333 ? PRO A 339 ? ASP A 300 PRO A 306 5 ? 7 HELX_P HELX_P17 AB8 TYR A 340 ? GLU A 345 ? TYR A 307 GLU A 312 1 ? 6 HELX_P HELX_P18 AB9 ASP A 346 ? ASN A 356 ? ASP A 313 ASN A 323 5 ? 11 HELX_P HELX_P19 AC1 TYR A 357 ? ASP A 372 ? TYR A 324 ASP A 339 1 ? 16 HELX_P HELX_P20 AC2 GLU A 386 ? ARG A 398 ? GLU A 353 ARG A 365 1 ? 13 HELX_P HELX_P21 AC3 ASP A 405 ? GLY A 413 ? ASP A 372 GLY A 380 1 ? 9 HELX_P HELX_P22 AC4 GLU A 417 ? THR A 430 ? GLU A 384 THR A 397 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA2 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 THR A 67 ? PRO A 74 ? THR A 34 PRO A 41 AA1 2 ILE A 131 ? ILE A 138 ? ILE A 98 ILE A 105 AA2 1 PHE A 141 ? ASP A 142 ? PHE A 108 ASP A 109 AA2 2 VAL A 145 ? PRO A 146 ? VAL A 112 PRO A 113 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ASN A 73 ? N ASN A 40 O THR A 136 ? O THR A 103 AA2 1 2 N ASP A 142 ? N ASP A 109 O VAL A 145 ? O VAL A 112 # _pdbx_entry_details.entry_id 9T5K _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 204 ? ? -90.64 52.76 2 1 ASN A 367 ? ? -96.49 32.64 3 1 GLN A 383 ? ? 68.20 -4.62 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9T5K _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_fitting_list.id 1 _em_3d_fitting_list.3d_fitting_id 1 _em_3d_fitting_list.pdb_entry_id . _em_3d_fitting_list.pdb_chain_id . _em_3d_fitting_list.pdb_chain_residue_range . _em_3d_fitting_list.details ? _em_3d_fitting_list.chain_id ? _em_3d_fitting_list.chain_residue_range ? _em_3d_fitting_list.source_name AlphaFold _em_3d_fitting_list.type 'in silico model' _em_3d_fitting_list.accession_code ? _em_3d_fitting_list.initial_refinement_model_id ? # _em_3d_reconstruction.entry_id 9T5K _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 2.6 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 7037732 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.5 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'Langya virus N-core' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_imaging.entry_id 9T5K _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 1200 _em_imaging.nominal_defocus_max 2400 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? _em_imaging.objective_aperture ? _em_imaging.microscope_serial_number ? _em_imaging.microscope_version ? # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material COPPER _em_sample_support.grid_mesh_size 300 _em_sample_support.grid_type 'Quantifoil R2/1' _em_sample_support.details ? _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 9T5K _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 9T5K _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 9T5K _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry C1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -32 ? A MET 1 2 1 Y 1 A HIS -31 ? A HIS 2 3 1 Y 1 A HIS -30 ? A HIS 3 4 1 Y 1 A HIS -29 ? A HIS 4 5 1 Y 1 A HIS -28 ? A HIS 5 6 1 Y 1 A HIS -27 ? A HIS 6 7 1 Y 1 A HIS -26 ? A HIS 7 8 1 Y 1 A GLY -25 ? A GLY 8 9 1 Y 1 A LYS -24 ? A LYS 9 10 1 Y 1 A PRO -23 ? A PRO 10 11 1 Y 1 A ILE -22 ? A ILE 11 12 1 Y 1 A PRO -21 ? A PRO 12 13 1 Y 1 A ASN -20 ? A ASN 13 14 1 Y 1 A PRO -19 ? A PRO 14 15 1 Y 1 A LEU -18 ? A LEU 15 16 1 Y 1 A LEU -17 ? A LEU 16 17 1 Y 1 A GLY -16 ? A GLY 17 18 1 Y 1 A LEU -15 ? A LEU 18 19 1 Y 1 A ASP -14 ? A ASP 19 20 1 Y 1 A SER -13 ? A SER 20 21 1 Y 1 A THR -12 ? A THR 21 22 1 Y 1 A GLU -11 ? A GLU 22 23 1 Y 1 A ASN -10 ? A ASN 23 24 1 Y 1 A LEU -9 ? A LEU 24 25 1 Y 1 A TYR -8 ? A TYR 25 26 1 Y 1 A PHE -7 ? A PHE 26 27 1 Y 1 A GLN -6 ? A GLN 27 28 1 Y 1 A GLY -5 ? A GLY 28 29 1 Y 1 A ILE -4 ? A ILE 29 30 1 Y 1 A ASP -3 ? A ASP 30 31 1 Y 1 A PRO -2 ? A PRO 31 32 1 Y 1 A PHE -1 ? A PHE 32 33 1 Y 1 A THR 0 ? A THR 33 34 1 Y 1 A MET 1 ? A MET 34 35 1 Y 1 A ARG 117 ? A ARG 150 36 1 Y 1 A ARG 118 ? A ARG 151 37 1 Y 1 A GLY 119 ? A GLY 152 38 1 Y 1 A GLU 120 ? A GLU 153 39 1 Y 1 A LYS 121 ? A LYS 154 40 1 Y 1 A ALA 179 ? A ALA 212 41 1 Y 1 A PRO 180 ? A PRO 213 42 1 Y 1 A ASP 181 ? A ASP 214 43 1 Y 1 A THR 182 ? A THR 215 44 1 Y 1 A ALA 183 ? A ALA 216 45 1 Y 1 A GLU 184 ? A GLU 217 46 1 Y 1 A GLU 185 ? A GLU 218 47 1 Y 1 A SER 186 ? A SER 219 48 1 Y 1 A GLU 187 ? A GLU 220 49 1 Y 1 A ALA 344 ? A ALA 377 50 1 Y 1 A LEU 345 ? A LEU 378 51 1 Y 1 A GLN 399 ? A GLN 432 52 1 Y 1 A ARG 400 ? A ARG 433 53 1 Y 1 A HIS 401 ? A HIS 434 54 1 Y 1 A GLU 402 ? A GLU 435 55 1 Y 1 A THR 403 ? A THR 436 56 1 Y 1 A ASN 404 ? A ASN 437 57 1 Y 1 A VAL 405 ? A VAL 438 58 1 Y 1 A GLN 406 ? A GLN 439 59 1 Y 1 A ALA 407 ? A ALA 440 60 1 Y 1 A ARG 408 ? A ARG 441 61 1 Y 1 A GLU 409 ? A GLU 442 62 1 Y 1 A GLY 410 ? A GLY 443 63 1 Y 1 A LYS 411 ? A LYS 444 64 1 Y 1 A PHE 412 ? A PHE 445 65 1 Y 1 A ASN 413 ? A ASN 446 66 1 Y 1 A VAL 414 ? A VAL 447 67 1 Y 1 A ALA 415 ? A ALA 448 68 1 Y 1 A ALA 416 ? A ALA 449 69 1 Y 1 A GLY 417 ? A GLY 450 70 1 Y 1 A GLY 418 ? A GLY 451 71 1 Y 1 A ILE 419 ? A ILE 452 72 1 Y 1 A GLU 420 ? A GLU 453 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 ILE N N N N 144 ILE CA C N S 145 ILE C C N N 146 ILE O O N N 147 ILE CB C N S 148 ILE CG1 C N N 149 ILE CG2 C N N 150 ILE CD1 C N N 151 ILE OXT O N N 152 ILE H H N N 153 ILE H2 H N N 154 ILE HA H N N 155 ILE HB H N N 156 ILE HG12 H N N 157 ILE HG13 H N N 158 ILE HG21 H N N 159 ILE HG22 H N N 160 ILE HG23 H N N 161 ILE HD11 H N N 162 ILE HD12 H N N 163 ILE HD13 H N N 164 ILE HXT H N N 165 LEU N N N N 166 LEU CA C N S 167 LEU C C N N 168 LEU O O N N 169 LEU CB C N N 170 LEU CG C N N 171 LEU CD1 C N N 172 LEU CD2 C N N 173 LEU OXT O N N 174 LEU H H N N 175 LEU H2 H N N 176 LEU HA H N N 177 LEU HB2 H N N 178 LEU HB3 H N N 179 LEU HG H N N 180 LEU HD11 H N N 181 LEU HD12 H N N 182 LEU HD13 H N N 183 LEU HD21 H N N 184 LEU HD22 H N N 185 LEU HD23 H N N 186 LEU HXT H N N 187 LYS N N N N 188 LYS CA C N S 189 LYS C C N N 190 LYS O O N N 191 LYS CB C N N 192 LYS CG C N N 193 LYS CD C N N 194 LYS CE C N N 195 LYS NZ N N N 196 LYS OXT O N N 197 LYS H H N N 198 LYS H2 H N N 199 LYS HA H N N 200 LYS HB2 H N N 201 LYS HB3 H N N 202 LYS HG2 H N N 203 LYS HG3 H N N 204 LYS HD2 H N N 205 LYS HD3 H N N 206 LYS HE2 H N N 207 LYS HE3 H N N 208 LYS HZ1 H N N 209 LYS HZ2 H N N 210 LYS HZ3 H N N 211 LYS HXT H N N 212 MET N N N N 213 MET CA C N S 214 MET C C N N 215 MET O O N N 216 MET CB C N N 217 MET CG C N N 218 MET SD S N N 219 MET CE C N N 220 MET OXT O N N 221 MET H H N N 222 MET H2 H N N 223 MET HA H N N 224 MET HB2 H N N 225 MET HB3 H N N 226 MET HG2 H N N 227 MET HG3 H N N 228 MET HE1 H N N 229 MET HE2 H N N 230 MET HE3 H N N 231 MET HXT H N N 232 PHE N N N N 233 PHE CA C N S 234 PHE C C N N 235 PHE O O N N 236 PHE CB C N N 237 PHE CG C Y N 238 PHE CD1 C Y N 239 PHE CD2 C Y N 240 PHE CE1 C Y N 241 PHE CE2 C Y N 242 PHE CZ C Y N 243 PHE OXT O N N 244 PHE H H N N 245 PHE H2 H N N 246 PHE HA H N N 247 PHE HB2 H N N 248 PHE HB3 H N N 249 PHE HD1 H N N 250 PHE HD2 H N N 251 PHE HE1 H N N 252 PHE HE2 H N N 253 PHE HZ H N N 254 PHE HXT H N N 255 PRO N N N N 256 PRO CA C N S 257 PRO C C N N 258 PRO O O N N 259 PRO CB C N N 260 PRO CG C N N 261 PRO CD C N N 262 PRO OXT O N N 263 PRO H H N N 264 PRO HA H N N 265 PRO HB2 H N N 266 PRO HB3 H N N 267 PRO HG2 H N N 268 PRO HG3 H N N 269 PRO HD2 H N N 270 PRO HD3 H N N 271 PRO HXT H N N 272 SER N N N N 273 SER CA C N S 274 SER C C N N 275 SER O O N N 276 SER CB C N N 277 SER OG O N N 278 SER OXT O N N 279 SER H H N N 280 SER H2 H N N 281 SER HA H N N 282 SER HB2 H N N 283 SER HB3 H N N 284 SER HG H N N 285 SER HXT H N N 286 THR N N N N 287 THR CA C N S 288 THR C C N N 289 THR O O N N 290 THR CB C N R 291 THR OG1 O N N 292 THR CG2 C N N 293 THR OXT O N N 294 THR H H N N 295 THR H2 H N N 296 THR HA H N N 297 THR HB H N N 298 THR HG1 H N N 299 THR HG21 H N N 300 THR HG22 H N N 301 THR HG23 H N N 302 THR HXT H N N 303 TRP N N N N 304 TRP CA C N S 305 TRP C C N N 306 TRP O O N N 307 TRP CB C N N 308 TRP CG C Y N 309 TRP CD1 C Y N 310 TRP CD2 C Y N 311 TRP NE1 N Y N 312 TRP CE2 C Y N 313 TRP CE3 C Y N 314 TRP CZ2 C Y N 315 TRP CZ3 C Y N 316 TRP CH2 C Y N 317 TRP OXT O N N 318 TRP H H N N 319 TRP H2 H N N 320 TRP HA H N N 321 TRP HB2 H N N 322 TRP HB3 H N N 323 TRP HD1 H N N 324 TRP HE1 H N N 325 TRP HE3 H N N 326 TRP HZ2 H N N 327 TRP HZ3 H N N 328 TRP HH2 H N N 329 TRP HXT H N N 330 TYR N N N N 331 TYR CA C N S 332 TYR C C N N 333 TYR O O N N 334 TYR CB C N N 335 TYR CG C Y N 336 TYR CD1 C Y N 337 TYR CD2 C Y N 338 TYR CE1 C Y N 339 TYR CE2 C Y N 340 TYR CZ C Y N 341 TYR OH O N N 342 TYR OXT O N N 343 TYR H H N N 344 TYR H2 H N N 345 TYR HA H N N 346 TYR HB2 H N N 347 TYR HB3 H N N 348 TYR HD1 H N N 349 TYR HD2 H N N 350 TYR HE1 H N N 351 TYR HE2 H N N 352 TYR HH H N N 353 TYR HXT H N N 354 VAL N N N N 355 VAL CA C N S 356 VAL C C N N 357 VAL O O N N 358 VAL CB C N N 359 VAL CG1 C N N 360 VAL CG2 C N N 361 VAL OXT O N N 362 VAL H H N N 363 VAL H2 H N N 364 VAL HA H N N 365 VAL HB H N N 366 VAL HG11 H N N 367 VAL HG12 H N N 368 VAL HG13 H N N 369 VAL HG21 H N N 370 VAL HG22 H N N 371 VAL HG23 H N N 372 VAL HXT H N N 373 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 ILE N CA sing N N 137 ILE N H sing N N 138 ILE N H2 sing N N 139 ILE CA C sing N N 140 ILE CA CB sing N N 141 ILE CA HA sing N N 142 ILE C O doub N N 143 ILE C OXT sing N N 144 ILE CB CG1 sing N N 145 ILE CB CG2 sing N N 146 ILE CB HB sing N N 147 ILE CG1 CD1 sing N N 148 ILE CG1 HG12 sing N N 149 ILE CG1 HG13 sing N N 150 ILE CG2 HG21 sing N N 151 ILE CG2 HG22 sing N N 152 ILE CG2 HG23 sing N N 153 ILE CD1 HD11 sing N N 154 ILE CD1 HD12 sing N N 155 ILE CD1 HD13 sing N N 156 ILE OXT HXT sing N N 157 LEU N CA sing N N 158 LEU N H sing N N 159 LEU N H2 sing N N 160 LEU CA C sing N N 161 LEU CA CB sing N N 162 LEU CA HA sing N N 163 LEU C O doub N N 164 LEU C OXT sing N N 165 LEU CB CG sing N N 166 LEU CB HB2 sing N N 167 LEU CB HB3 sing N N 168 LEU CG CD1 sing N N 169 LEU CG CD2 sing N N 170 LEU CG HG sing N N 171 LEU CD1 HD11 sing N N 172 LEU CD1 HD12 sing N N 173 LEU CD1 HD13 sing N N 174 LEU CD2 HD21 sing N N 175 LEU CD2 HD22 sing N N 176 LEU CD2 HD23 sing N N 177 LEU OXT HXT sing N N 178 LYS N CA sing N N 179 LYS N H sing N N 180 LYS N H2 sing N N 181 LYS CA C sing N N 182 LYS CA CB sing N N 183 LYS CA HA sing N N 184 LYS C O doub N N 185 LYS C OXT sing N N 186 LYS CB CG sing N N 187 LYS CB HB2 sing N N 188 LYS CB HB3 sing N N 189 LYS CG CD sing N N 190 LYS CG HG2 sing N N 191 LYS CG HG3 sing N N 192 LYS CD CE sing N N 193 LYS CD HD2 sing N N 194 LYS CD HD3 sing N N 195 LYS CE NZ sing N N 196 LYS CE HE2 sing N N 197 LYS CE HE3 sing N N 198 LYS NZ HZ1 sing N N 199 LYS NZ HZ2 sing N N 200 LYS NZ HZ3 sing N N 201 LYS OXT HXT sing N N 202 MET N CA sing N N 203 MET N H sing N N 204 MET N H2 sing N N 205 MET CA C sing N N 206 MET CA CB sing N N 207 MET CA HA sing N N 208 MET C O doub N N 209 MET C OXT sing N N 210 MET CB CG sing N N 211 MET CB HB2 sing N N 212 MET CB HB3 sing N N 213 MET CG SD sing N N 214 MET CG HG2 sing N N 215 MET CG HG3 sing N N 216 MET SD CE sing N N 217 MET CE HE1 sing N N 218 MET CE HE2 sing N N 219 MET CE HE3 sing N N 220 MET OXT HXT sing N N 221 PHE N CA sing N N 222 PHE N H sing N N 223 PHE N H2 sing N N 224 PHE CA C sing N N 225 PHE CA CB sing N N 226 PHE CA HA sing N N 227 PHE C O doub N N 228 PHE C OXT sing N N 229 PHE CB CG sing N N 230 PHE CB HB2 sing N N 231 PHE CB HB3 sing N N 232 PHE CG CD1 doub Y N 233 PHE CG CD2 sing Y N 234 PHE CD1 CE1 sing Y N 235 PHE CD1 HD1 sing N N 236 PHE CD2 CE2 doub Y N 237 PHE CD2 HD2 sing N N 238 PHE CE1 CZ doub Y N 239 PHE CE1 HE1 sing N N 240 PHE CE2 CZ sing Y N 241 PHE CE2 HE2 sing N N 242 PHE CZ HZ sing N N 243 PHE OXT HXT sing N N 244 PRO N CA sing N N 245 PRO N CD sing N N 246 PRO N H sing N N 247 PRO CA C sing N N 248 PRO CA CB sing N N 249 PRO CA HA sing N N 250 PRO C O doub N N 251 PRO C OXT sing N N 252 PRO CB CG sing N N 253 PRO CB HB2 sing N N 254 PRO CB HB3 sing N N 255 PRO CG CD sing N N 256 PRO CG HG2 sing N N 257 PRO CG HG3 sing N N 258 PRO CD HD2 sing N N 259 PRO CD HD3 sing N N 260 PRO OXT HXT sing N N 261 SER N CA sing N N 262 SER N H sing N N 263 SER N H2 sing N N 264 SER CA C sing N N 265 SER CA CB sing N N 266 SER CA HA sing N N 267 SER C O doub N N 268 SER C OXT sing N N 269 SER CB OG sing N N 270 SER CB HB2 sing N N 271 SER CB HB3 sing N N 272 SER OG HG sing N N 273 SER OXT HXT sing N N 274 THR N CA sing N N 275 THR N H sing N N 276 THR N H2 sing N N 277 THR CA C sing N N 278 THR CA CB sing N N 279 THR CA HA sing N N 280 THR C O doub N N 281 THR C OXT sing N N 282 THR CB OG1 sing N N 283 THR CB CG2 sing N N 284 THR CB HB sing N N 285 THR OG1 HG1 sing N N 286 THR CG2 HG21 sing N N 287 THR CG2 HG22 sing N N 288 THR CG2 HG23 sing N N 289 THR OXT HXT sing N N 290 TRP N CA sing N N 291 TRP N H sing N N 292 TRP N H2 sing N N 293 TRP CA C sing N N 294 TRP CA CB sing N N 295 TRP CA HA sing N N 296 TRP C O doub N N 297 TRP C OXT sing N N 298 TRP CB CG sing N N 299 TRP CB HB2 sing N N 300 TRP CB HB3 sing N N 301 TRP CG CD1 doub Y N 302 TRP CG CD2 sing Y N 303 TRP CD1 NE1 sing Y N 304 TRP CD1 HD1 sing N N 305 TRP CD2 CE2 doub Y N 306 TRP CD2 CE3 sing Y N 307 TRP NE1 CE2 sing Y N 308 TRP NE1 HE1 sing N N 309 TRP CE2 CZ2 sing Y N 310 TRP CE3 CZ3 doub Y N 311 TRP CE3 HE3 sing N N 312 TRP CZ2 CH2 doub Y N 313 TRP CZ2 HZ2 sing N N 314 TRP CZ3 CH2 sing Y N 315 TRP CZ3 HZ3 sing N N 316 TRP CH2 HH2 sing N N 317 TRP OXT HXT sing N N 318 TYR N CA sing N N 319 TYR N H sing N N 320 TYR N H2 sing N N 321 TYR CA C sing N N 322 TYR CA CB sing N N 323 TYR CA HA sing N N 324 TYR C O doub N N 325 TYR C OXT sing N N 326 TYR CB CG sing N N 327 TYR CB HB2 sing N N 328 TYR CB HB3 sing N N 329 TYR CG CD1 doub Y N 330 TYR CG CD2 sing Y N 331 TYR CD1 CE1 sing Y N 332 TYR CD1 HD1 sing N N 333 TYR CD2 CE2 doub Y N 334 TYR CD2 HD2 sing N N 335 TYR CE1 CZ doub Y N 336 TYR CE1 HE1 sing N N 337 TYR CE2 CZ sing Y N 338 TYR CE2 HE2 sing N N 339 TYR CZ OH sing N N 340 TYR OH HH sing N N 341 TYR OXT HXT sing N N 342 VAL N CA sing N N 343 VAL N H sing N N 344 VAL N H2 sing N N 345 VAL CA C sing N N 346 VAL CA CB sing N N 347 VAL CA HA sing N N 348 VAL C O doub N N 349 VAL C OXT sing N N 350 VAL CB CG1 sing N N 351 VAL CB CG2 sing N N 352 VAL CB HB sing N N 353 VAL CG1 HG11 sing N N 354 VAL CG1 HG12 sing N N 355 VAL CG1 HG13 sing N N 356 VAL CG2 HG21 sing N N 357 VAL CG2 HG22 sing N N 358 VAL CG2 HG23 sing N N 359 VAL OXT HXT sing N N 360 # _em_admin.current_status REL _em_admin.deposition_date 2025-11-05 _em_admin.deposition_site PDBE _em_admin.entry_id 9T5K _em_admin.last_update 2026-04-22 _em_admin.map_release_date 2026-04-22 _em_admin.title 'Local refinement of RNA-free assembled Langya virus N-core' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 2971765 _em_entity_assembly_naturalsource.organism 'Langya virus' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain 'Isolate SDQD_H1801' _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 562 _em_entity_assembly_recombinant.organism 'Escherichia coli' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 40 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'FEI FALCON IV (4k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version _em_software.reference_DOI 'PARTICLE SELECTION' ? 1 1 ? ? cryoSPARC 4.5.3 ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? ? MASKING ? 3 ? ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? cryoSPARC 4.5.3 ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? ? 'MODEL FITTING' ? 7 ? 1 ? ? ? ? OTHER ? 8 ? ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 9 1 ? ? cryoSPARC 4.5.3 ? 'FINAL EULER ASSIGNMENT' ? 10 1 ? ? cryoSPARC 4.5.3 ? CLASSIFICATION ? 11 1 ? ? cryoSPARC 4.5.3 ? RECONSTRUCTION ? 12 1 ? ? cryoSPARC 4.5.3 ? 'MODEL REFINEMENT' ? 13 ? 1 ? PHENIX 1.21.1_5286 ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'Kempe Foundation' _pdbx_audit_support.country Sweden _pdbx_audit_support.grant_number 'JCK 23135' _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.type 'in silico model' _pdbx_initial_refinement_model.source_name AlphaFold _pdbx_initial_refinement_model.accession_code ? # _atom_sites.entry_id 9T5K _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ #