data_9T8E # _entry.id 9T8E # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.416 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9T8E pdb_00009t8e 10.2210/pdb9t8e/pdb WWPDB D_1292150628 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2026-07-29 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9T8E _pdbx_database_status.recvd_initial_deposition_date 2025-11-12 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible N # _pdbx_contact_author.id 2 _pdbx_contact_author.email cftornero@cib.csic.es _pdbx_contact_author.name_first Carlos _pdbx_contact_author.name_last Fernandez-Tornero _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-5097-731X # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Darriere, T.' 1 0000-0002-1655-525X 'Ruiz, F.M.' 2 0000-0002-0385-7777 'Cuevas, C.' 3 ? 'Fernandez-Tornero, C.' 4 0000-0001-5097-731X # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'The structures of ecteinascidins bound to DNA shed light on their mechanism of action' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Darriere, T.' 1 0000-0002-1655-525X primary 'Ruiz, F.M.' 2 0000-0002-0385-7777 primary 'Martinez-Diez, M.' 3 ? primary 'Lima Ribeiro, M.' 4 ? primary 'Cuevas, C.' 5 ? primary 'Fernandez-Tornero, C.' 6 0000-0001-5097-731X # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*CP*GP*AP*TP*GP*CP*AP*TP*CP*G)-3') ; 3045.004 2 ? ? ? ? 2 non-polymer syn 'POTASSIUM ION' 39.098 2 ? ? ? ? 3 non-polymer syn Lurbinectedin 784.874 1 ? ? ? ? 4 non-polymer syn SPERMINE 202.340 1 ? ? ? ? 5 water nat water 18.015 43 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DC)(DG)(DA)(DT)(DG)(DC)(DA)(DT)(DC)(DG)' _entity_poly.pdbx_seq_one_letter_code_can CGATGCATCG _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'POTASSIUM ION' K 3 Lurbinectedin A1JUE 4 SPERMINE SPM 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DG n 1 3 DA n 1 4 DT n 1 5 DG n 1 6 DC n 1 7 DA n 1 8 DT n 1 9 DC n 1 10 DG n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 10 _pdbx_entity_src_syn.organism_scientific 'DNA molecule' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 2853804 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A1JUE non-polymer . Lurbinectedin ? 'C41 H44 N4 O10 S' 784.874 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 SPM non-polymer . SPERMINE ? 'C10 H26 N4' 202.340 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC DC A . n A 1 2 DG 2 2 2 DG DG A . n A 1 3 DA 3 3 3 DA DA A . n A 1 4 DT 4 4 4 DT DT A . n A 1 5 DG 5 5 5 DG DG A . n A 1 6 DC 6 6 6 DC DC A . n A 1 7 DA 7 7 7 DA DA A . n A 1 8 DT 8 8 8 DT DT A . n A 1 9 DC 9 9 9 DC DC A . n A 1 10 DG 10 10 10 DG DG A . n B 1 1 DC 1 1 1 DC DC B . n B 1 2 DG 2 2 2 DG DG B . n B 1 3 DA 3 3 3 DA DA B . n B 1 4 DT 4 4 4 DT DT B . n B 1 5 DG 5 5 5 DG DG B . n B 1 6 DC 6 6 6 DC DC B . n B 1 7 DA 7 7 7 DA DA B . n B 1 8 DT 8 8 8 DT DT B . n B 1 9 DC 9 9 9 DC DC B . n B 1 10 DG 10 10 10 DG DG B . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id A1JUE _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id A1JUE _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 K 1 101 1 K K A . D 2 K 1 102 2 K K A . E 3 A1JUE 1 101 101 A1JUE LUR B . F 4 SPM 1 102 102 SPM SPM B . G 5 HOH 1 201 27 HOH HOH A . G 5 HOH 2 202 16 HOH HOH A . G 5 HOH 3 203 17 HOH HOH A . G 5 HOH 4 204 28 HOH HOH A . G 5 HOH 5 205 37 HOH HOH A . G 5 HOH 6 206 18 HOH HOH A . G 5 HOH 7 207 35 HOH HOH A . G 5 HOH 8 208 10 HOH HOH A . G 5 HOH 9 209 19 HOH HOH A . G 5 HOH 10 210 4 HOH HOH A . G 5 HOH 11 211 11 HOH HOH A . G 5 HOH 12 212 24 HOH HOH A . G 5 HOH 13 213 26 HOH HOH A . G 5 HOH 14 214 34 HOH HOH A . H 5 HOH 1 201 41 HOH HOH B . H 5 HOH 2 202 40 HOH HOH B . H 5 HOH 3 203 38 HOH HOH B . H 5 HOH 4 204 22 HOH HOH B . H 5 HOH 5 205 39 HOH HOH B . H 5 HOH 6 206 23 HOH HOH B . H 5 HOH 7 207 13 HOH HOH B . H 5 HOH 8 208 8 HOH HOH B . H 5 HOH 9 209 36 HOH HOH B . H 5 HOH 10 210 15 HOH HOH B . H 5 HOH 11 211 3 HOH HOH B . H 5 HOH 12 212 29 HOH HOH B . H 5 HOH 13 213 21 HOH HOH B . H 5 HOH 14 214 7 HOH HOH B . H 5 HOH 15 215 5 HOH HOH B . H 5 HOH 16 216 1 HOH HOH B . H 5 HOH 17 217 6 HOH HOH B . H 5 HOH 18 218 12 HOH HOH B . H 5 HOH 19 219 9 HOH HOH B . H 5 HOH 20 220 30 HOH HOH B . H 5 HOH 21 221 31 HOH HOH B . H 5 HOH 22 222 42 HOH HOH B . H 5 HOH 23 223 33 HOH HOH B . H 5 HOH 24 224 32 HOH HOH B . H 5 HOH 25 225 25 HOH HOH B . H 5 HOH 26 226 2 HOH HOH B . H 5 HOH 27 227 43 HOH HOH B . H 5 HOH 28 228 20 HOH HOH B . H 5 HOH 29 229 14 HOH HOH B . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_reference_DOI _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? '5.8.0430 (refmacat 0.4.105)' ? 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . ? 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . ? 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . ? 4 # _cell.angle_alpha 90 _cell.angle_alpha_esd ? _cell.angle_beta 90 _cell.angle_beta_esd ? _cell.angle_gamma 90 _cell.angle_gamma_esd ? _cell.entry_id 9T8E _cell.details ? _cell.formula_units_Z ? _cell.length_a 112.224 _cell.length_a_esd ? _cell.length_b 112.224 _cell.length_b_esd ? _cell.length_c 112.224 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 48 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9T8E _symmetry.cell_setting ? _symmetry.Int_Tables_number 213 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 3 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9T8E _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'Sodium malonate, potassium chloride, lithium chloride, spermine' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 292 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2024-10-27 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9793 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ALBA BEAMLINE XALOC' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9793 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline XALOC _diffrn_source.pdbx_synchrotron_site ALBA # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 9T8E _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.3 _reflns.d_resolution_low 39.7 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 11334 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.95 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 21.1 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 16.05 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.146 _reflns.pdbx_Rpim_I_all 0.032 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_CC_star 1 _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.142 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.3 _reflns_shell.d_res_low 2.5 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.08 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 5107 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 20.7 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 3.39 _reflns_shell.pdbx_Rpim_I_all 0.745 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.464 _reflns_shell.pdbx_CC_star 0.796 _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 3.306 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] 0.000 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][2] 0.000 _refine.aniso_B[2][3] 0.000 _refine.aniso_B[3][3] 0.000 _refine.B_iso_max ? _refine.B_iso_mean 55.652 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.957 _refine.correlation_coeff_Fo_to_Fc_free 0.924 _refine.details 'Hydrogens have been added in their riding positions' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9T8E _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.3 _refine.ls_d_res_low 39.7 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 10731 _refine.ls_number_reflns_R_free 567 _refine.ls_number_reflns_R_work 10731 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.9 _refine.ls_percent_reflns_R_free 5.019 _refine.ls_R_factor_all 0.202 _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free 0.2168 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2009 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'MASK BULK SOLVENT' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.115 _refine.pdbx_overall_ESU_R_Free 0.111 _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 4.741 _refine.overall_SU_ML 0.099 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 404 _refine_hist.pdbx_number_atoms_ligand 71 _refine_hist.number_atoms_solvent 43 _refine_hist.number_atoms_total 518 _refine_hist.d_res_high 2.3 _refine_hist.d_res_low 39.7 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_Zscore _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.014 0.011 530 ? r_bond_refined_d ? ? ? 'X-RAY DIFFRACTION' ? 0.002 0.017 263 ? r_bond_other_d ? ? ? 'X-RAY DIFFRACTION' ? 3.730 1.852 810 ? r_angle_refined_deg ? ? ? 'X-RAY DIFFRACTION' ? 0.645 1.568 633 ? r_angle_other_deg ? ? ? 'X-RAY DIFFRACTION' ? 42.749 14.000 5 ? r_dihedral_angle_2_deg ? ? ? 'X-RAY DIFFRACTION' ? 1.463 5.000 16 ? r_dihedral_angle_other_2_deg ? ? ? 'X-RAY DIFFRACTION' ? 0.121 0.200 87 ? r_chiral_restr ? ? ? 'X-RAY DIFFRACTION' ? 0.026 0.020 300 ? r_gen_planes_refined ? ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 77 ? r_gen_planes_other ? ? ? 'X-RAY DIFFRACTION' ? 0.273 0.200 91 ? r_nbd_refined ? ? ? 'X-RAY DIFFRACTION' ? 0.241 0.200 313 ? r_symmetry_nbd_other ? ? ? 'X-RAY DIFFRACTION' ? 0.275 0.200 220 ? r_nbtor_refined ? ? ? 'X-RAY DIFFRACTION' ? 0.107 0.200 180 ? r_symmetry_nbtor_other ? ? ? 'X-RAY DIFFRACTION' ? 0.192 0.200 37 ? r_xyhbond_nbd_refined ? ? ? 'X-RAY DIFFRACTION' ? 0.212 0.200 5 ? r_metal_ion_refined ? ? ? 'X-RAY DIFFRACTION' ? 0.541 0.200 8 ? r_symmetry_nbd_refined ? ? ? 'X-RAY DIFFRACTION' ? 0.264 0.200 31 ? r_nbd_other ? ? ? 'X-RAY DIFFRACTION' ? 0.232 0.200 4 ? r_symmetry_xyhbond_nbd_refined ? ? ? 'X-RAY DIFFRACTION' ? 8.351 5.622 530 ? r_scbond_it ? ? ? 'X-RAY DIFFRACTION' ? 8.373 5.633 531 ? r_scbond_other ? ? ? 'X-RAY DIFFRACTION' ? 9.554 9.990 810 ? r_scangle_it ? ? ? 'X-RAY DIFFRACTION' ? 9.548 9.998 811 ? r_scangle_other ? ? ? 'X-RAY DIFFRACTION' ? 10.007 72.930 836 ? r_lrange_it ? ? ? 'X-RAY DIFFRACTION' ? 10.608 73.228 826 ? r_lrange_other ? ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.3 _refine_ls_shell.d_res_low 2.5 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free ? _refine_ls_shell.number_reflns_R_work 5107 _refine_ls_shell.percent_reflns_obs 100.0000 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.37 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.correlation_coeff_Fo_to_Fc ? _refine_ls_shell.correlation_coeff_Fo_to_Fc_free ? _refine_ls_shell.correlation_coeff_I_to_Fcsqd_work ? _refine_ls_shell.correlation_coeff_I_to_Fcsqd_free ? _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? _refine_ls_shell.R_factor_R_free 0.40 # _struct.entry_id 9T8E _struct.title 'Crystal structure of lurbinectedin bound to 10-mer duplex DNA' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9T8E _struct_keywords.text 'ecteinascidin, DNA duplex, covalent bond, DNA' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 4 ? G N N 5 ? H N N 5 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 9T8E _struct_ref.pdbx_db_accession 9T8E _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9T8E A 1 ? 10 ? 9T8E 1 ? 10 ? 1 10 2 1 9T8E B 1 ? 10 ? 9T8E 1 ? 10 ? 1 10 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2030 ? 1 MORE -5 ? 1 'SSA (A^2)' 4060 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'native gel electrophoresis' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale one ? B DG 5 N2 ? ? ? 1_555 E A1JUE . C27 ? ? B DG 5 B A1JUE 101 1_555 ? ? ? ? ? ? ? 1.439 ? ? metalc1 metalc ? ? A DT 4 O2 ? ? ? 1_555 D K . K ? ? A DT 4 A K 102 1_555 ? ? ? ? ? ? ? 2.499 ? ? metalc2 metalc ? ? A DT 8 O2 ? ? ? 1_555 C K . K ? ? A DT 8 A K 101 1_555 ? ? ? ? ? ? ? 2.489 ? ? metalc3 metalc ? ? A DG 10 "O3'" ? ? ? 1_555 D K . K ? ? A DG 10 A K 102 16_545 ? ? ? ? ? ? ? 2.799 ? ? metalc4 metalc ? ? C K . K ? ? ? 1_555 B DT 4 O2 ? ? A K 101 B DT 4 1_555 ? ? ? ? ? ? ? 2.624 ? ? metalc5 metalc ? ? C K . K ? ? ? 15_554 B DG 10 "O3'" ? ? A K 101 B DG 10 1_555 ? ? ? ? ? ? ? 3.005 ? ? metalc6 metalc ? ? C K . K ? ? ? 1_555 H HOH . O ? ? A K 101 B HOH 216 1_555 ? ? ? ? ? ? ? 2.823 ? ? metalc7 metalc ? ? C K . K ? ? ? 1_555 H HOH . O ? ? A K 101 B HOH 226 1_555 ? ? ? ? ? ? ? 2.838 ? ? metalc8 metalc ? ? D K . K ? ? ? 1_555 B DT 8 O2 ? ? A K 102 B DT 8 1_555 ? ? ? ? ? ? ? 2.771 ? ? metalc9 metalc ? ? D K . K ? ? ? 1_555 H HOH . O ? ? A K 102 B HOH 212 1_555 ? ? ? ? ? ? ? 2.645 ? ? metalc10 metalc ? ? D K . K ? ? ? 1_555 H HOH . O ? ? A K 102 B HOH 214 1_555 ? ? ? ? ? ? ? 2.925 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 10 N1 ? ? A DC 1 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 10 O6 ? ? A DC 1 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 10 N2 ? ? A DC 1 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 9 N3 ? ? A DG 2 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 9 O2 ? ? A DG 2 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 9 N4 ? ? A DG 2 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DA 3 N1 ? ? ? 1_555 B DT 8 N3 ? ? A DA 3 B DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DA 3 N6 ? ? ? 1_555 B DT 8 O4 ? ? A DA 3 B DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DT 4 N3 ? ? ? 1_555 B DA 7 N1 ? ? A DT 4 B DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DT 4 O4 ? ? ? 1_555 B DA 7 N6 ? ? A DT 4 B DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 5 N1 ? ? ? 1_555 B DC 6 N3 ? ? A DG 5 B DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 5 N2 ? ? ? 1_555 B DC 6 O2 ? ? A DG 5 B DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DG 5 O6 ? ? ? 1_555 B DC 6 N4 ? ? A DG 5 B DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 6 N3 ? ? ? 1_555 B DG 5 N1 ? ? A DC 6 B DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 6 N4 ? ? ? 1_555 B DG 5 O6 ? ? A DC 6 B DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 6 O2 ? ? ? 1_555 B DG 5 N2 ? ? A DC 6 B DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DA 7 N1 ? ? ? 1_555 B DT 4 N3 ? ? A DA 7 B DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DA 7 N6 ? ? ? 1_555 B DT 4 O4 ? ? A DA 7 B DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DT 8 N3 ? ? ? 1_555 B DA 3 N1 ? ? A DT 8 B DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DT 8 O4 ? ? ? 1_555 B DA 3 N6 ? ? A DT 8 B DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DC 9 N3 ? ? ? 1_555 B DG 2 N1 ? ? A DC 9 B DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DC 9 N4 ? ? ? 1_555 B DG 2 O6 ? ? A DC 9 B DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DC 9 O2 ? ? ? 1_555 B DG 2 N2 ? ? A DC 9 B DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DC 1 N3 ? ? A DG 10 B DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B DC 1 O2 ? ? A DG 10 B DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DC 1 N4 ? ? A DG 10 B DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O2 ? A DT 4 ? A DT 4 ? 1_555 K ? D K . ? A K 102 ? 1_555 "O3'" ? A DG 10 ? A DG 10 ? 1_555 45.3 ? 2 O2 ? A DT 4 ? A DT 4 ? 1_555 K ? D K . ? A K 102 ? 1_555 O2 ? B DT 8 ? B DT 8 ? 1_555 91.2 ? 3 "O3'" ? A DG 10 ? A DG 10 ? 1_555 K ? D K . ? A K 102 ? 1_555 O2 ? B DT 8 ? B DT 8 ? 1_555 95.7 ? 4 O2 ? A DT 4 ? A DT 4 ? 1_555 K ? D K . ? A K 102 ? 1_555 O ? H HOH . ? B HOH 212 ? 1_555 155.5 ? 5 "O3'" ? A DG 10 ? A DG 10 ? 1_555 K ? D K . ? A K 102 ? 1_555 O ? H HOH . ? B HOH 212 ? 1_555 145.1 ? 6 O2 ? B DT 8 ? B DT 8 ? 1_555 K ? D K . ? A K 102 ? 1_555 O ? H HOH . ? B HOH 212 ? 1_555 68.0 ? 7 O2 ? A DT 4 ? A DT 4 ? 1_555 K ? D K . ? A K 102 ? 1_555 O ? H HOH . ? B HOH 214 ? 1_555 107.4 ? 8 "O3'" ? A DG 10 ? A DG 10 ? 1_555 K ? D K . ? A K 102 ? 1_555 O ? H HOH . ? B HOH 214 ? 1_555 66.7 ? 9 O2 ? B DT 8 ? B DT 8 ? 1_555 K ? D K . ? A K 102 ? 1_555 O ? H HOH . ? B HOH 214 ? 1_555 71.0 ? 10 O ? H HOH . ? B HOH 212 ? 1_555 K ? D K . ? A K 102 ? 1_555 O ? H HOH . ? B HOH 214 ? 1_555 78.7 ? 11 O2 ? A DT 8 ? A DT 8 ? 1_555 K ? C K . ? A K 101 ? 1_555 O2 ? B DT 4 ? B DT 4 ? 1_555 85.4 ? 12 O2 ? A DT 8 ? A DT 8 ? 1_555 K ? C K . ? A K 101 ? 1_555 "O3'" ? B DG 10 ? B DG 10 ? 1_555 81.6 ? 13 O2 ? B DT 4 ? B DT 4 ? 1_555 K ? C K . ? A K 101 ? 1_555 "O3'" ? B DG 10 ? B DG 10 ? 1_555 33.1 ? 14 O2 ? A DT 8 ? A DT 8 ? 1_555 K ? C K . ? A K 101 ? 1_555 O ? H HOH . ? B HOH 216 ? 1_555 109.9 ? 15 O2 ? B DT 4 ? B DT 4 ? 1_555 K ? C K . ? A K 101 ? 1_555 O ? H HOH . ? B HOH 216 ? 1_555 75.6 ? 16 "O3'" ? B DG 10 ? B DG 10 ? 1_555 K ? C K . ? A K 101 ? 1_555 O ? H HOH . ? B HOH 216 ? 1_555 48.3 ? 17 O2 ? A DT 8 ? A DT 8 ? 1_555 K ? C K . ? A K 101 ? 1_555 O ? H HOH . ? B HOH 226 ? 1_555 162.6 ? 18 O2 ? B DT 4 ? B DT 4 ? 1_555 K ? C K . ? A K 101 ? 1_555 O ? H HOH . ? B HOH 226 ? 1_555 89.4 ? 19 "O3'" ? B DG 10 ? B DG 10 ? 1_555 K ? C K . ? A K 101 ? 1_555 O ? H HOH . ? B HOH 226 ? 1_555 102.8 ? 20 O ? H HOH . ? B HOH 216 ? 1_555 K ? C K . ? A K 101 ? 1_555 O ? H HOH . ? B HOH 226 ? 1_555 84.8 ? # _pdbx_entry_details.entry_id 9T8E _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification N # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O6 _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 DG _pdbx_validate_close_contact.auth_seq_id_1 10 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 201 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.19 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O3'" A DG 5 ? ? "C3'" A DG 5 ? ? 1.381 1.419 -0.038 0.006 N 2 1 C2 B DG 5 ? ? N2 B DG 5 ? ? 1.405 1.341 0.064 0.010 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 114.39 108.30 6.09 0.30 N 2 1 C6 A DC 1 ? ? N1 A DC 1 ? ? C2 A DC 1 ? ? 117.67 120.30 -2.63 0.40 N 3 1 "O3'" A DC 1 ? ? P A DG 2 ? ? "O5'" A DG 2 ? ? 115.49 104.00 11.49 1.90 Y 4 1 "O5'" A DG 2 ? ? P A DG 2 ? ? OP1 A DG 2 ? ? 92.03 105.70 -13.67 0.90 N 5 1 "O5'" A DG 2 ? ? P A DG 2 ? ? OP2 A DG 2 ? ? 88.72 105.70 -16.98 0.90 N 6 1 "O3'" A DG 2 ? ? P A DA 3 ? ? OP1 A DA 3 ? ? 120.18 110.50 9.68 1.10 Y 7 1 "O5'" A DA 3 ? ? P A DA 3 ? ? OP1 A DA 3 ? ? 97.60 105.70 -8.10 0.90 N 8 1 OP1 A DC 6 ? ? P A DC 6 ? ? OP2 A DC 6 ? ? 132.24 119.60 12.64 1.50 N 9 1 "O5'" A DA 7 ? ? P A DA 7 ? ? OP2 A DA 7 ? ? 96.76 105.70 -8.94 0.90 N 10 1 "O4'" A DA 7 ? ? "C1'" A DA 7 ? ? N9 A DA 7 ? ? 110.23 108.30 1.93 0.30 N 11 1 "O5'" A DT 8 ? ? P A DT 8 ? ? OP2 A DT 8 ? ? 97.99 105.70 -7.71 0.90 N 12 1 OP1 A DC 9 ? ? P A DC 9 ? ? OP2 A DC 9 ? ? 132.55 119.60 12.95 1.50 N 13 1 "O5'" A DC 9 ? ? "C5'" A DC 9 ? ? "C4'" A DC 9 ? ? 103.28 109.40 -6.12 0.80 N 14 1 "O4'" B DC 1 ? ? "C1'" B DC 1 ? ? N1 B DC 1 ? ? 99.53 108.00 -8.47 0.70 N 15 1 "O3'" B DC 1 ? ? P B DG 2 ? ? OP1 B DG 2 ? ? 123.82 110.50 13.32 1.10 Y 16 1 "O5'" B DG 2 ? ? P B DG 2 ? ? OP1 B DG 2 ? ? 96.14 105.70 -9.56 0.90 N 17 1 "O4'" B DG 2 ? ? "C1'" B DG 2 ? ? N9 B DG 2 ? ? 110.99 108.30 2.69 0.30 N 18 1 "O3'" B DG 2 ? ? P B DA 3 ? ? OP2 B DA 3 ? ? 90.83 105.20 -14.37 2.20 Y 19 1 "O3'" B DG 2 ? ? P B DA 3 ? ? OP1 B DA 3 ? ? 83.84 105.20 -21.36 2.20 Y 20 1 "O3'" B DA 3 ? ? P B DT 4 ? ? OP2 B DT 4 ? ? 117.13 110.50 6.63 1.10 Y 21 1 "O5'" B DT 4 ? ? P B DT 4 ? ? OP1 B DT 4 ? ? 100.03 105.70 -5.67 0.90 N 22 1 "O3'" B DT 4 ? ? P B DG 5 ? ? OP2 B DG 5 ? ? 118.46 110.50 7.96 1.10 Y 23 1 OP1 B DG 5 ? ? P B DG 5 ? ? OP2 B DG 5 ? ? 129.76 119.60 10.16 1.50 N 24 1 "O5'" B DG 5 ? ? P B DG 5 ? ? OP1 B DG 5 ? ? 99.23 105.70 -6.47 0.90 N 25 1 "O5'" B DG 5 ? ? P B DG 5 ? ? OP2 B DG 5 ? ? 97.85 105.70 -7.85 0.90 N 26 1 "O4'" B DG 5 ? ? "C1'" B DG 5 ? ? N9 B DG 5 ? ? 103.06 108.00 -4.94 0.70 N 27 1 "O4'" B DC 6 ? ? "C1'" B DC 6 ? ? N1 B DC 6 ? ? 110.69 108.30 2.39 0.30 N 28 1 "O3'" B DA 7 ? ? P B DT 8 ? ? OP2 B DT 8 ? ? 123.87 110.50 13.37 1.10 Y 29 1 "O3'" B DT 8 ? ? P B DC 9 ? ? OP1 B DC 9 ? ? 91.84 105.20 -13.36 2.20 Y 30 1 "O4'" B DG 10 ? ? "C1'" B DG 10 ? ? N9 B DG 10 ? ? 103.72 108.00 -4.28 0.70 N # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A1JUE C1 C N N 1 A1JUE O1 O N N 2 A1JUE C2 C Y N 3 A1JUE C3 C Y N 4 A1JUE C4 C Y N 5 A1JUE C5 C Y N 6 A1JUE N1 N Y N 7 A1JUE C6 C Y N 8 A1JUE C7 C Y N 9 A1JUE C8 C Y N 10 A1JUE C9 C Y N 11 A1JUE C10 C N N 12 A1JUE C11 C N N 13 A1JUE N2 N N N 14 A1JUE C12 C N R 15 A1JUE C13 C N N 16 A1JUE S1 S N N 17 A1JUE C14 C N R 18 A1JUE C15 C Y N 19 A1JUE C16 C Y N 20 A1JUE O2 O N N 21 A1JUE C17 C N N 22 A1JUE C18 C N N 23 A1JUE O3 O N N 24 A1JUE C19 C Y N 25 A1JUE C20 C N N 26 A1JUE C21 C Y N 27 A1JUE C22 C Y N 28 A1JUE C23 C Y N 29 A1JUE C24 C N R 30 A1JUE C25 C N N 31 A1JUE O4 O N N 32 A1JUE C26 C N N 33 A1JUE O5 O N N 34 A1JUE N3 N N N 35 A1JUE C27 C N S 36 A1JUE C28 C N S 37 A1JUE C29 C N N 38 A1JUE C30 C Y N 39 A1JUE C31 C Y N 40 A1JUE C32 C Y N 41 A1JUE C33 C N N 42 A1JUE C34 C Y N 43 A1JUE O7 O N N 44 A1JUE C35 C N N 45 A1JUE C36 C Y N 46 A1JUE O8 O N N 47 A1JUE C37 C Y N 48 A1JUE C38 C N R 49 A1JUE C39 C N R 50 A1JUE N4 N N N 51 A1JUE C40 C N N 52 A1JUE O9 O N N 53 A1JUE C41 C N N 54 A1JUE O10 O N N 55 A1JUE H2 H N N 56 A1JUE H3 H N N 57 A1JUE H1 H N N 58 A1JUE H4 H N N 59 A1JUE H5 H N N 60 A1JUE H6 H N N 61 A1JUE H7 H N N 62 A1JUE H8 H N N 63 A1JUE H9 H N N 64 A1JUE H10 H N N 65 A1JUE H11 H N N 66 A1JUE H26 H N N 67 A1JUE H13 H N N 68 A1JUE H14 H N N 69 A1JUE H15 H N N 70 A1JUE H16 H N N 71 A1JUE H17 H N N 72 A1JUE H18 H N N 73 A1JUE H19 H N N 74 A1JUE H20 H N N 75 A1JUE H21 H N N 76 A1JUE H22 H N N 77 A1JUE H24 H N N 78 A1JUE H23 H N N 79 A1JUE H46 H N N 80 A1JUE H27 H N N 81 A1JUE H28 H N N 82 A1JUE H29 H N N 83 A1JUE H30 H N N 84 A1JUE H32 H N N 85 A1JUE H33 H N N 86 A1JUE H31 H N N 87 A1JUE H35 H N N 88 A1JUE H36 H N N 89 A1JUE H34 H N N 90 A1JUE H37 H N N 91 A1JUE H38 H N N 92 A1JUE H39 H N N 93 A1JUE H41 H N N 94 A1JUE H42 H N N 95 A1JUE H40 H N N 96 A1JUE H44 H N N 97 A1JUE H43 H N N 98 A1JUE O6 O N N 99 A1JUE H12 H N N 100 DA OP3 O N N 101 DA P P N N 102 DA OP1 O N N 103 DA OP2 O N N 104 DA "O5'" O N N 105 DA "C5'" C N N 106 DA "C4'" C N R 107 DA "O4'" O N N 108 DA "C3'" C N S 109 DA "O3'" O N N 110 DA "C2'" C N N 111 DA "C1'" C N R 112 DA N9 N Y N 113 DA C8 C Y N 114 DA N7 N Y N 115 DA C5 C Y N 116 DA C6 C Y N 117 DA N6 N N N 118 DA N1 N Y N 119 DA C2 C Y N 120 DA N3 N Y N 121 DA C4 C Y N 122 DA HOP3 H N N 123 DA HOP2 H N N 124 DA "H5'" H N N 125 DA "H5''" H N N 126 DA "H4'" H N N 127 DA "H3'" H N N 128 DA "HO3'" H N N 129 DA "H2'" H N N 130 DA "H2''" H N N 131 DA "H1'" H N N 132 DA H8 H N N 133 DA H61 H N N 134 DA H62 H N N 135 DA H2 H N N 136 DC OP3 O N N 137 DC P P N N 138 DC OP1 O N N 139 DC OP2 O N N 140 DC "O5'" O N N 141 DC "C5'" C N N 142 DC "C4'" C N R 143 DC "O4'" O N N 144 DC "C3'" C N S 145 DC "O3'" O N N 146 DC "C2'" C N N 147 DC "C1'" C N R 148 DC N1 N N N 149 DC C2 C N N 150 DC O2 O N N 151 DC N3 N N N 152 DC C4 C N N 153 DC N4 N N N 154 DC C5 C N N 155 DC C6 C N N 156 DC HOP3 H N N 157 DC HOP2 H N N 158 DC "H5'" H N N 159 DC "H5''" H N N 160 DC "H4'" H N N 161 DC "H3'" H N N 162 DC "HO3'" H N N 163 DC "H2'" H N N 164 DC "H2''" H N N 165 DC "H1'" H N N 166 DC H41 H N N 167 DC H42 H N N 168 DC H5 H N N 169 DC H6 H N N 170 DG OP3 O N N 171 DG P P N N 172 DG OP1 O N N 173 DG OP2 O N N 174 DG "O5'" O N N 175 DG "C5'" C N N 176 DG "C4'" C N R 177 DG "O4'" O N N 178 DG "C3'" C N S 179 DG "O3'" O N N 180 DG "C2'" C N N 181 DG "C1'" C N R 182 DG N9 N Y N 183 DG C8 C Y N 184 DG N7 N Y N 185 DG C5 C Y N 186 DG C6 C N N 187 DG O6 O N N 188 DG N1 N N N 189 DG C2 C N N 190 DG N2 N N N 191 DG N3 N N N 192 DG C4 C Y N 193 DG HOP3 H N N 194 DG HOP2 H N N 195 DG "H5'" H N N 196 DG "H5''" H N N 197 DG "H4'" H N N 198 DG "H3'" H N N 199 DG "HO3'" H N N 200 DG "H2'" H N N 201 DG "H2''" H N N 202 DG "H1'" H N N 203 DG H8 H N N 204 DG H1 H N N 205 DG H21 H N N 206 DG H22 H N N 207 DT OP3 O N N 208 DT P P N N 209 DT OP1 O N N 210 DT OP2 O N N 211 DT "O5'" O N N 212 DT "C5'" C N N 213 DT "C4'" C N R 214 DT "O4'" O N N 215 DT "C3'" C N S 216 DT "O3'" O N N 217 DT "C2'" C N N 218 DT "C1'" C N R 219 DT N1 N N N 220 DT C2 C N N 221 DT O2 O N N 222 DT N3 N N N 223 DT C4 C N N 224 DT O4 O N N 225 DT C5 C N N 226 DT C7 C N N 227 DT C6 C N N 228 DT HOP3 H N N 229 DT HOP2 H N N 230 DT "H5'" H N N 231 DT "H5''" H N N 232 DT "H4'" H N N 233 DT "H3'" H N N 234 DT "HO3'" H N N 235 DT "H2'" H N N 236 DT "H2''" H N N 237 DT "H1'" H N N 238 DT H3 H N N 239 DT H71 H N N 240 DT H72 H N N 241 DT H73 H N N 242 DT H6 H N N 243 HOH O O N N 244 HOH H1 H N N 245 HOH H2 H N N 246 K K K N N 247 SPM N1 N N N 248 SPM C2 C N N 249 SPM C3 C N N 250 SPM C4 C N N 251 SPM N5 N N N 252 SPM C6 C N N 253 SPM C7 C N N 254 SPM C8 C N N 255 SPM C9 C N N 256 SPM N10 N N N 257 SPM C11 C N N 258 SPM C12 C N N 259 SPM C13 C N N 260 SPM N14 N N N 261 SPM HN11 H N N 262 SPM HN12 H N N 263 SPM H21 H N N 264 SPM H22 H N N 265 SPM H31 H N N 266 SPM H32 H N N 267 SPM H41 H N N 268 SPM H42 H N N 269 SPM HN5 H N N 270 SPM H61 H N N 271 SPM H62 H N N 272 SPM H71 H N N 273 SPM H72 H N N 274 SPM H81 H N N 275 SPM H82 H N N 276 SPM H91 H N N 277 SPM H92 H N N 278 SPM HN0 H N N 279 SPM H111 H N N 280 SPM H112 H N N 281 SPM H121 H N N 282 SPM H122 H N N 283 SPM H131 H N N 284 SPM H132 H N N 285 SPM HN41 H N N 286 SPM HN42 H N N 287 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1JUE O1 C1 sing N N 1 A1JUE O1 C2 sing N N 2 A1JUE C3 C2 doub Y N 3 A1JUE C3 C4 sing Y N 4 A1JUE C2 C9 sing Y N 5 A1JUE C4 C5 doub Y N 6 A1JUE C9 C8 doub Y N 7 A1JUE C5 C8 sing Y N 8 A1JUE C5 N1 sing Y N 9 A1JUE C8 C7 sing Y N 10 A1JUE C41 O10 sing N N 11 A1JUE C41 O9 sing N N 12 A1JUE O10 C21 sing N N 13 A1JUE N1 C6 sing Y N 14 A1JUE O9 C22 sing N N 15 A1JUE C7 C6 doub Y N 16 A1JUE C7 C10 sing N N 17 A1JUE C21 C22 doub Y N 18 A1JUE C21 C19 sing Y N 19 A1JUE C6 C12 sing N N 20 A1JUE C20 C19 sing N N 21 A1JUE C22 C23 sing Y N 22 A1JUE C19 C16 doub Y N 23 A1JUE O4 C25 sing N N 24 A1JUE O4 C26 sing N N 25 A1JUE C10 C11 sing N N 26 A1JUE C18 C17 sing N N 27 A1JUE C25 C24 sing N N 28 A1JUE C12 C26 sing N N 29 A1JUE C12 C13 sing N N 30 A1JUE C12 N2 sing N N 31 A1JUE C26 O5 doub N N 32 A1JUE C23 C24 sing N N 33 A1JUE C23 C15 doub Y N 34 A1JUE C13 S1 sing N N 35 A1JUE C16 C15 sing Y N 36 A1JUE C16 O2 sing N N 37 A1JUE C24 N3 sing N N 38 A1JUE C11 N2 sing N N 39 A1JUE C17 O2 sing N N 40 A1JUE C17 O3 doub N N 41 A1JUE C15 C14 sing N N 42 A1JUE N3 C27 sing N N 43 A1JUE N3 C39 sing N N 44 A1JUE S1 C14 sing N N 45 A1JUE C14 C39 sing N N 46 A1JUE C27 C28 sing N N 47 A1JUE C39 C38 sing N N 48 A1JUE C29 C28 sing N N 49 A1JUE C29 C30 sing N N 50 A1JUE C28 N4 sing N N 51 A1JUE C30 C31 doub Y N 52 A1JUE C30 C37 sing Y N 53 A1JUE C31 C32 sing Y N 54 A1JUE C38 C37 sing N N 55 A1JUE C38 N4 sing N N 56 A1JUE C37 C36 doub Y N 57 A1JUE C32 C33 sing N N 58 A1JUE C32 C34 doub Y N 59 A1JUE N4 C40 sing N N 60 A1JUE C36 C34 sing Y N 61 A1JUE C36 O8 sing N N 62 A1JUE C34 O7 sing N N 63 A1JUE O7 C35 sing N N 64 A1JUE C1 H2 sing N N 65 A1JUE C1 H3 sing N N 66 A1JUE C1 H1 sing N N 67 A1JUE C3 H4 sing N N 68 A1JUE C4 H5 sing N N 69 A1JUE N1 H6 sing N N 70 A1JUE C9 H7 sing N N 71 A1JUE C10 H8 sing N N 72 A1JUE C10 H9 sing N N 73 A1JUE C11 H10 sing N N 74 A1JUE C11 H11 sing N N 75 A1JUE N2 H26 sing N N 76 A1JUE C13 H13 sing N N 77 A1JUE C13 H14 sing N N 78 A1JUE C14 H15 sing N N 79 A1JUE C18 H16 sing N N 80 A1JUE C18 H17 sing N N 81 A1JUE C18 H18 sing N N 82 A1JUE C20 H19 sing N N 83 A1JUE C20 H20 sing N N 84 A1JUE C20 H21 sing N N 85 A1JUE C24 H22 sing N N 86 A1JUE C25 H24 sing N N 87 A1JUE C25 H23 sing N N 88 A1JUE C27 H46 sing N N 89 A1JUE C28 H27 sing N N 90 A1JUE C29 H28 sing N N 91 A1JUE C29 H29 sing N N 92 A1JUE C31 H30 sing N N 93 A1JUE C33 H32 sing N N 94 A1JUE C33 H33 sing N N 95 A1JUE C33 H31 sing N N 96 A1JUE C35 H35 sing N N 97 A1JUE C35 H36 sing N N 98 A1JUE C35 H34 sing N N 99 A1JUE O8 H37 sing N N 100 A1JUE C38 H38 sing N N 101 A1JUE C39 H39 sing N N 102 A1JUE C40 H41 sing N N 103 A1JUE C40 H42 sing N N 104 A1JUE C40 H40 sing N N 105 A1JUE C41 H44 sing N N 106 A1JUE C41 H43 sing N N 107 A1JUE C27 O6 sing N N 108 A1JUE O6 H12 sing N N 109 DA OP3 P sing N N 110 DA OP3 HOP3 sing N N 111 DA P OP1 doub N N 112 DA P OP2 sing N N 113 DA P "O5'" sing N N 114 DA OP2 HOP2 sing N N 115 DA "O5'" "C5'" sing N N 116 DA "C5'" "C4'" sing N N 117 DA "C5'" "H5'" sing N N 118 DA "C5'" "H5''" sing N N 119 DA "C4'" "O4'" sing N N 120 DA "C4'" "C3'" sing N N 121 DA "C4'" "H4'" sing N N 122 DA "O4'" "C1'" sing N N 123 DA "C3'" "O3'" sing N N 124 DA "C3'" "C2'" sing N N 125 DA "C3'" "H3'" sing N N 126 DA "O3'" "HO3'" sing N N 127 DA "C2'" "C1'" sing N N 128 DA "C2'" "H2'" sing N N 129 DA "C2'" "H2''" sing N N 130 DA "C1'" N9 sing N N 131 DA "C1'" "H1'" sing N N 132 DA N9 C8 sing Y N 133 DA N9 C4 sing Y N 134 DA C8 N7 doub Y N 135 DA C8 H8 sing N N 136 DA N7 C5 sing Y N 137 DA C5 C6 sing Y N 138 DA C5 C4 doub Y N 139 DA C6 N6 sing N N 140 DA C6 N1 doub Y N 141 DA N6 H61 sing N N 142 DA N6 H62 sing N N 143 DA N1 C2 sing Y N 144 DA C2 N3 doub Y N 145 DA C2 H2 sing N N 146 DA N3 C4 sing Y N 147 DC OP3 P sing N N 148 DC OP3 HOP3 sing N N 149 DC P OP1 doub N N 150 DC P OP2 sing N N 151 DC P "O5'" sing N N 152 DC OP2 HOP2 sing N N 153 DC "O5'" "C5'" sing N N 154 DC "C5'" "C4'" sing N N 155 DC "C5'" "H5'" sing N N 156 DC "C5'" "H5''" sing N N 157 DC "C4'" "O4'" sing N N 158 DC "C4'" "C3'" sing N N 159 DC "C4'" "H4'" sing N N 160 DC "O4'" "C1'" sing N N 161 DC "C3'" "O3'" sing N N 162 DC "C3'" "C2'" sing N N 163 DC "C3'" "H3'" sing N N 164 DC "O3'" "HO3'" sing N N 165 DC "C2'" "C1'" sing N N 166 DC "C2'" "H2'" sing N N 167 DC "C2'" "H2''" sing N N 168 DC "C1'" N1 sing N N 169 DC "C1'" "H1'" sing N N 170 DC N1 C2 sing N N 171 DC N1 C6 sing N N 172 DC C2 O2 doub N N 173 DC C2 N3 sing N N 174 DC N3 C4 doub N N 175 DC C4 N4 sing N N 176 DC C4 C5 sing N N 177 DC N4 H41 sing N N 178 DC N4 H42 sing N N 179 DC C5 C6 doub N N 180 DC C5 H5 sing N N 181 DC C6 H6 sing N N 182 DG OP3 P sing N N 183 DG OP3 HOP3 sing N N 184 DG P OP1 doub N N 185 DG P OP2 sing N N 186 DG P "O5'" sing N N 187 DG OP2 HOP2 sing N N 188 DG "O5'" "C5'" sing N N 189 DG "C5'" "C4'" sing N N 190 DG "C5'" "H5'" sing N N 191 DG "C5'" "H5''" sing N N 192 DG "C4'" "O4'" sing N N 193 DG "C4'" "C3'" sing N N 194 DG "C4'" "H4'" sing N N 195 DG "O4'" "C1'" sing N N 196 DG "C3'" "O3'" sing N N 197 DG "C3'" "C2'" sing N N 198 DG "C3'" "H3'" sing N N 199 DG "O3'" "HO3'" sing N N 200 DG "C2'" "C1'" sing N N 201 DG "C2'" "H2'" sing N N 202 DG "C2'" "H2''" sing N N 203 DG "C1'" N9 sing N N 204 DG "C1'" "H1'" sing N N 205 DG N9 C8 sing Y N 206 DG N9 C4 sing Y N 207 DG C8 N7 doub Y N 208 DG C8 H8 sing N N 209 DG N7 C5 sing Y N 210 DG C5 C6 sing N N 211 DG C5 C4 doub Y N 212 DG C6 O6 doub N N 213 DG C6 N1 sing N N 214 DG N1 C2 sing N N 215 DG N1 H1 sing N N 216 DG C2 N2 sing N N 217 DG C2 N3 doub N N 218 DG N2 H21 sing N N 219 DG N2 H22 sing N N 220 DG N3 C4 sing N N 221 DT OP3 P sing N N 222 DT OP3 HOP3 sing N N 223 DT P OP1 doub N N 224 DT P OP2 sing N N 225 DT P "O5'" sing N N 226 DT OP2 HOP2 sing N N 227 DT "O5'" "C5'" sing N N 228 DT "C5'" "C4'" sing N N 229 DT "C5'" "H5'" sing N N 230 DT "C5'" "H5''" sing N N 231 DT "C4'" "O4'" sing N N 232 DT "C4'" "C3'" sing N N 233 DT "C4'" "H4'" sing N N 234 DT "O4'" "C1'" sing N N 235 DT "C3'" "O3'" sing N N 236 DT "C3'" "C2'" sing N N 237 DT "C3'" "H3'" sing N N 238 DT "O3'" "HO3'" sing N N 239 DT "C2'" "C1'" sing N N 240 DT "C2'" "H2'" sing N N 241 DT "C2'" "H2''" sing N N 242 DT "C1'" N1 sing N N 243 DT "C1'" "H1'" sing N N 244 DT N1 C2 sing N N 245 DT N1 C6 sing N N 246 DT C2 O2 doub N N 247 DT C2 N3 sing N N 248 DT N3 C4 sing N N 249 DT N3 H3 sing N N 250 DT C4 O4 doub N N 251 DT C4 C5 sing N N 252 DT C5 C7 sing N N 253 DT C5 C6 doub N N 254 DT C7 H71 sing N N 255 DT C7 H72 sing N N 256 DT C7 H73 sing N N 257 DT C6 H6 sing N N 258 HOH O H1 sing N N 259 HOH O H2 sing N N 260 SPM N1 C2 sing N N 261 SPM N1 HN11 sing N N 262 SPM N1 HN12 sing N N 263 SPM C2 C3 sing N N 264 SPM C2 H21 sing N N 265 SPM C2 H22 sing N N 266 SPM C3 C4 sing N N 267 SPM C3 H31 sing N N 268 SPM C3 H32 sing N N 269 SPM C4 N5 sing N N 270 SPM C4 H41 sing N N 271 SPM C4 H42 sing N N 272 SPM N5 C6 sing N N 273 SPM N5 HN5 sing N N 274 SPM C6 C7 sing N N 275 SPM C6 H61 sing N N 276 SPM C6 H62 sing N N 277 SPM C7 C8 sing N N 278 SPM C7 H71 sing N N 279 SPM C7 H72 sing N N 280 SPM C8 C9 sing N N 281 SPM C8 H81 sing N N 282 SPM C8 H82 sing N N 283 SPM C9 N10 sing N N 284 SPM C9 H91 sing N N 285 SPM C9 H92 sing N N 286 SPM N10 C11 sing N N 287 SPM N10 HN0 sing N N 288 SPM C11 C12 sing N N 289 SPM C11 H111 sing N N 290 SPM C11 H112 sing N N 291 SPM C12 C13 sing N N 292 SPM C12 H121 sing N N 293 SPM C12 H122 sing N N 294 SPM C13 N14 sing N N 295 SPM C13 H131 sing N N 296 SPM C13 H132 sing N N 297 SPM N14 HN41 sing N N 298 SPM N14 HN42 sing N N 299 # _ndb_struct_conf_na.entry_id 9T8E _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B DG 10 1_555 0.330 -0.064 0.399 -13.507 -4.438 -3.064 1 A_DC1:DG10_B A 1 ? B 10 ? 19 1 1 A DG 2 1_555 B DC 9 1_555 -0.270 -0.227 -0.497 -21.238 -25.760 2.583 2 A_DG2:DC9_B A 2 ? B 9 ? 19 1 1 A DA 3 1_555 B DT 8 1_555 -0.215 -0.070 -0.350 -10.103 -11.536 2.268 3 A_DA3:DT8_B A 3 ? B 8 ? 20 1 1 A DT 4 1_555 B DA 7 1_555 0.099 -0.087 -0.325 -5.190 -11.537 1.761 4 A_DT4:DA7_B A 4 ? B 7 ? 20 1 1 A DG 5 1_555 B DC 6 1_555 0.028 -0.190 -0.370 -3.153 -4.241 -2.400 5 A_DG5:DC6_B A 5 ? B 6 ? 19 1 1 A DC 6 1_555 B DG 5 1_555 0.386 -0.258 0.034 -3.520 -8.046 0.571 6 A_DC6:DG5_B A 6 ? B 5 ? 19 1 1 A DA 7 1_555 B DT 4 1_555 0.042 -0.146 -0.494 2.391 -18.171 1.244 7 A_DA7:DT4_B A 7 ? B 4 ? 20 1 1 A DT 8 1_555 B DA 3 1_555 0.168 -0.232 -0.725 11.951 -16.924 -1.364 8 A_DT8:DA3_B A 8 ? B 3 ? 20 1 1 A DC 9 1_555 B DG 2 1_555 0.328 -0.338 -0.417 10.597 -11.646 -2.147 9 A_DC9:DG2_B A 9 ? B 2 ? 19 1 1 A DG 10 1_555 B DC 1 1_555 0.023 -0.278 0.262 7.244 -7.123 -3.206 10 A_DG10:DC1_B A 10 ? B 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B DG 10 1_555 A DG 2 1_555 B DC 9 1_555 0.855 -0.490 3.529 7.266 13.560 32.920 -2.848 -0.271 3.202 22.464 -12.037 36.247 1 AA_DC1DG2:DC9DG10_BB A 1 ? B 10 ? A 2 ? B 9 ? 1 A DG 2 1_555 B DC 9 1_555 A DA 3 1_555 B DT 8 1_555 -0.107 0.508 3.030 -3.450 6.384 34.678 -0.050 -0.303 3.069 10.568 5.711 35.406 2 AA_DG2DA3:DT8DC9_BB A 2 ? B 9 ? A 3 ? B 8 ? 1 A DA 3 1_555 B DT 8 1_555 A DT 4 1_555 B DA 7 1_555 -0.114 -0.710 3.197 0.821 1.061 30.919 -1.529 0.368 3.167 1.989 -1.540 30.947 3 AA_DA3DT4:DA7DT8_BB A 3 ? B 8 ? A 4 ? B 7 ? 1 A DT 4 1_555 B DA 7 1_555 A DG 5 1_555 B DC 6 1_555 0.341 0.038 3.431 0.203 10.968 31.093 -1.905 -0.565 3.259 19.709 -0.365 32.927 4 AA_DT4DG5:DC6DA7_BB A 4 ? B 7 ? A 5 ? B 6 ? 1 A DG 5 1_555 B DC 6 1_555 A DC 6 1_555 B DG 5 1_555 -1.017 0.087 3.282 -4.733 -0.696 38.504 0.218 0.941 3.377 -1.050 7.143 38.789 5 AA_DG5DC6:DG5DC6_BB A 5 ? B 6 ? A 6 ? B 5 ? 1 A DC 6 1_555 B DG 5 1_555 A DA 7 1_555 B DT 4 1_555 0.178 0.382 3.349 4.473 13.695 28.287 -1.974 0.548 3.185 25.998 -8.492 31.678 6 AA_DC6DA7:DT4DG5_BB A 6 ? B 5 ? A 7 ? B 4 ? 1 A DA 7 1_555 B DT 4 1_555 A DT 8 1_555 B DA 3 1_555 -0.068 -0.489 2.966 0.997 -0.195 32.903 -0.832 0.274 2.966 -0.344 -1.760 32.918 7 AA_DA7DT8:DA3DT4_BB A 7 ? B 4 ? A 8 ? B 3 ? 1 A DT 8 1_555 B DA 3 1_555 A DC 9 1_555 B DG 2 1_555 0.646 1.265 3.463 5.490 7.112 35.307 0.926 -0.185 3.696 11.497 -8.876 36.397 8 AA_DT8DC9:DG2DA3_BB A 8 ? B 3 ? A 9 ? B 2 ? 1 A DC 9 1_555 B DG 2 1_555 A DG 10 1_555 B DC 1 1_555 -1.078 1.172 3.483 -5.736 6.440 34.748 0.865 0.826 3.758 10.582 9.425 35.770 9 AA_DC9DG10:DC1DG2_BB A 9 ? B 2 ? A 10 ? B 1 ? # _pdbx_audit_support.funding_organization 'Other private' _pdbx_audit_support.country Spain _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'in silico model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.details 'ideal B-DNA' # _atom_sites.entry_id 9T8E _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.008911 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008911 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008911 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.pdbx_scat_Z _atom_type.pdbx_N_electrons _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c C 6 6 2.3103 20.8439 1.0201 10.2075 1.5888 0.5687 0.8651 51.6512 0.2156 H 1 1 0.4930 10.5109 0.3229 26.1257 0.1402 3.1424 0.0408 57.7997 0.0030 K 19 19 8.2190 12.7949 7.4402 0.7748 1.0520 213.1870 0.8659 41.6841 1.6926 N 7 7 12.2220 0.0057 3.1346 9.8933 2.0141 28.9975 1.1672 0.5826 -11.5379 O 8 8 3.0487 13.2771 2.2870 5.7011 1.5464 0.3239 0.8671 32.9089 0.2508 P 15 15 6.4348 1.9067 4.1793 27.1570 1.7801 0.5260 1.4909 68.1645 1.2679 S 16 16 6.9054 1.4679 5.2035 22.2151 1.4379 0.2536 1.5863 56.1720 1.0495 # loop_ #