HEADER HYDROLASE 17-NOV-25 9T9N TITLE CRYSTAL STRUCTURE OF AP4A HYDROLASE (APAH) FROM PSEUDOMONAS AERUGINOSA TITLE 2 IN COMPLEX WITH MG IONS COMPND MOL_ID: 1; COMPND 2 MOLECULE: BIS(5'-NUCLEOSYL)-TETRAPHOSPHATASE, SYMMETRICAL; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: AP4A HYDROLASE,DIADENOSINE 5',5'''-P1,P4-TETRAPHOSPHATE COMPND 5 PYROPHOSPHOHYDROLASE,DIADENOSINE TETRAPHOSPHATASE; COMPND 6 EC: 3.6.1.41; COMPND 7 ENGINEERED: YES; COMPND 8 OTHER_DETAILS: THE FIRST 3 N-TERMINUS RESIDUE (GSH) BELONG TO CLEAVED COMPND 9 HIS-TAG. PROTEIN NUMBERING STARTS WITH THE FIRST MET RESIDUE. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 GENE: APAH, PA0590; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET28B KEYWDS AP4A, GP4G, NP4N, AP3A, AP5A, TETRAPHOSPHATASE, VIRULENCE, SECOND KEYWDS 2 MESSENGER, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR G.PISTOIA,F.IMPERI,A.DI MATTEO,G.GIARDINA REVDAT 1 02-SEP-26 9T9N 0 JRNL AUTH G.PISTOIA,M.CERVONI,F.CATALANO,F.TROILO,F.GUIDI,E.COMPARINI, JRNL AUTH 2 G.MIGNOGNA,C.TRAVAGLINI-ALLOCATELLI,A.GIUFFRE,A.COLUCCIA, JRNL AUTH 3 F.IMPERI,A.DI MATTEO,G.GIARDINA JRNL TITL STRUCTURAL AND FUNCTIONAL INSIGHTS INTO PSEUDOMONAS JRNL TITL 2 AERUGINOSA APAH, A DIADENOSINE TETRAPHOSPHATASE CRUCIAL FOR JRNL TITL 3 BACTERIAL VIRULENCE. JRNL REF PROTEIN SCI. V. 35 70781 2026 JRNL REFN ESSN 1469-896X JRNL PMID 42640267 JRNL DOI 10.1002/PRO.70781 REMARK 2 REMARK 2 RESOLUTION. 1.89 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.19.2_4158: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.89 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 61.55 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 48730 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.780 REMARK 3 FREE R VALUE TEST SET COUNT : 2330 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 61.5500 - 4.8600 0.99 2914 130 0.1696 0.1978 REMARK 3 2 4.8600 - 3.8600 1.00 2786 148 0.1473 0.1738 REMARK 3 3 3.8600 - 3.3700 1.00 2752 148 0.1861 0.2277 REMARK 3 4 3.3700 - 3.0600 1.00 2753 138 0.2255 0.2593 REMARK 3 5 3.0600 - 2.8500 1.00 2726 141 0.2440 0.2775 REMARK 3 6 2.8400 - 2.6800 1.00 2774 117 0.2349 0.2451 REMARK 3 7 2.6800 - 2.5400 1.00 2712 132 0.2268 0.2968 REMARK 3 8 2.5400 - 2.4300 1.00 2695 168 0.2259 0.2582 REMARK 3 9 2.4300 - 2.3400 1.00 2707 145 0.2274 0.3098 REMARK 3 10 2.3400 - 2.2600 1.00 2691 134 0.2342 0.2999 REMARK 3 11 2.2600 - 2.1900 1.00 2713 131 0.2482 0.3031 REMARK 3 12 2.1900 - 2.1200 1.00 2705 135 0.2446 0.3025 REMARK 3 13 2.1200 - 2.0700 1.00 2693 134 0.2499 0.3086 REMARK 3 14 2.0700 - 2.0200 1.00 2719 112 0.2642 0.2509 REMARK 3 15 2.0200 - 1.9700 1.00 2678 145 0.2858 0.3452 REMARK 3 16 1.9700 - 1.9300 1.00 2728 120 0.3333 0.3629 REMARK 3 17 1.9300 - 1.8900 0.98 2654 152 0.3563 0.4034 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.130 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 4295 REMARK 3 ANGLE : 1.020 5838 REMARK 3 CHIRALITY : 0.058 640 REMARK 3 PLANARITY : 0.009 759 REMARK 3 DIHEDRAL : 5.564 589 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -2 THROUGH 119 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.7537 -4.4887 -13.0532 REMARK 3 T TENSOR REMARK 3 T11: 0.3006 T22: 0.3150 REMARK 3 T33: 0.2580 T12: -0.0136 REMARK 3 T13: -0.0700 T23: 0.0492 REMARK 3 L TENSOR REMARK 3 L11: 1.6726 L22: 1.9364 REMARK 3 L33: 2.2380 L12: 0.0526 REMARK 3 L13: 0.0662 L23: -2.0786 REMARK 3 S TENSOR REMARK 3 S11: 0.1302 S12: -0.1490 S13: 0.0002 REMARK 3 S21: -0.0723 S22: 0.2609 S23: 0.1623 REMARK 3 S31: 0.2101 S32: -0.1657 S33: 0.3310 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 120 THROUGH 183 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.0505 5.5075 -19.3902 REMARK 3 T TENSOR REMARK 3 T11: 0.2678 T22: 0.3618 REMARK 3 T33: 0.3971 T12: 0.0275 REMARK 3 T13: -0.0187 T23: -0.0119 REMARK 3 L TENSOR REMARK 3 L11: 0.1636 L22: 0.3570 REMARK 3 L33: 0.6522 L12: -0.1355 REMARK 3 L13: 0.0297 L23: -0.2071 REMARK 3 S TENSOR REMARK 3 S11: 0.0680 S12: 0.0973 S13: 0.1709 REMARK 3 S21: -0.1173 S22: -0.0589 S23: -0.4295 REMARK 3 S31: -0.0073 S32: 0.2196 S33: 0.0022 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 184 THROUGH 205 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.6531 15.1642 -28.6777 REMARK 3 T TENSOR REMARK 3 T11: 0.3874 T22: 0.3435 REMARK 3 T33: 0.3858 T12: 0.0378 REMARK 3 T13: 0.0655 T23: 0.0613 REMARK 3 L TENSOR REMARK 3 L11: 0.1432 L22: 0.1948 REMARK 3 L33: 0.0877 L12: 0.0181 REMARK 3 L13: 0.1352 L23: 0.0094 REMARK 3 S TENSOR REMARK 3 S11: 0.0010 S12: -0.0749 S13: 0.6861 REMARK 3 S21: -0.2354 S22: 0.4138 S23: -0.1155 REMARK 3 S31: -0.3421 S32: -0.1712 S33: 0.0050 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 206 THROUGH 270 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.8931 2.2117 -29.7114 REMARK 3 T TENSOR REMARK 3 T11: 0.4322 T22: 0.3484 REMARK 3 T33: 0.2685 T12: -0.0313 REMARK 3 T13: -0.1290 T23: 0.0854 REMARK 3 L TENSOR REMARK 3 L11: 1.2806 L22: 1.1379 REMARK 3 L33: 1.3985 L12: -0.7952 REMARK 3 L13: 0.1578 L23: -0.4216 REMARK 3 S TENSOR REMARK 3 S11: 0.1430 S12: 0.1561 S13: 0.1479 REMARK 3 S21: -0.7666 S22: 0.2942 S23: 0.4240 REMARK 3 S31: 0.3893 S32: -0.3294 S33: 0.5170 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 119 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.7894 -42.6656 -10.0256 REMARK 3 T TENSOR REMARK 3 T11: 0.3741 T22: 0.3343 REMARK 3 T33: 0.3891 T12: -0.1040 REMARK 3 T13: 0.0413 T23: -0.0703 REMARK 3 L TENSOR REMARK 3 L11: 0.9459 L22: 3.3638 REMARK 3 L33: 1.6097 L12: -0.6905 REMARK 3 L13: 0.7893 L23: 1.4133 REMARK 3 S TENSOR REMARK 3 S11: -0.0050 S12: 0.1089 S13: -0.0677 REMARK 3 S21: -0.6910 S22: 0.4323 S23: -0.4854 REMARK 3 S31: 0.0182 S32: 0.1446 S33: 0.4516 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 120 THROUGH 183 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.8210 -32.2016 -1.4526 REMARK 3 T TENSOR REMARK 3 T11: 0.2582 T22: 0.3403 REMARK 3 T33: 0.4239 T12: -0.0714 REMARK 3 T13: -0.0679 T23: 0.0754 REMARK 3 L TENSOR REMARK 3 L11: 0.6516 L22: 1.2558 REMARK 3 L33: 0.4132 L12: 0.2053 REMARK 3 L13: 0.0859 L23: 0.4646 REMARK 3 S TENSOR REMARK 3 S11: -0.1635 S12: -0.0112 S13: 0.2169 REMARK 3 S21: -0.1541 S22: 0.2167 S23: 0.4953 REMARK 3 S31: -0.0979 S32: -0.0482 S33: 0.0192 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 184 THROUGH 213 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.3583 -23.1123 7.6533 REMARK 3 T TENSOR REMARK 3 T11: 0.4395 T22: 0.3151 REMARK 3 T33: 0.3600 T12: -0.0062 REMARK 3 T13: -0.0650 T23: -0.0294 REMARK 3 L TENSOR REMARK 3 L11: 0.0298 L22: 0.3426 REMARK 3 L33: 0.1669 L12: 0.1274 REMARK 3 L13: 0.0440 L23: -0.1084 REMARK 3 S TENSOR REMARK 3 S11: -0.1804 S12: -0.0205 S13: 0.0995 REMARK 3 S21: 0.6985 S22: 0.4477 S23: 0.0323 REMARK 3 S31: -0.5223 S32: -0.0901 S33: 0.0146 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 214 THROUGH 247 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.6220 -34.4098 9.1188 REMARK 3 T TENSOR REMARK 3 T11: 0.4521 T22: 0.3441 REMARK 3 T33: 0.5429 T12: -0.0551 REMARK 3 T13: -0.3390 T23: -0.2671 REMARK 3 L TENSOR REMARK 3 L11: 0.9658 L22: 1.5393 REMARK 3 L33: 0.7863 L12: -0.0324 REMARK 3 L13: -0.7521 L23: -0.2463 REMARK 3 S TENSOR REMARK 3 S11: 0.2844 S12: 0.1034 S13: 0.5435 REMARK 3 S21: 1.7708 S22: 0.6853 S23: -1.6373 REMARK 3 S31: -0.0823 S32: 0.1901 S33: 0.3623 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 248 THROUGH 269 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.0122 -41.1654 -0.2469 REMARK 3 T TENSOR REMARK 3 T11: -0.6991 T22: 0.5220 REMARK 3 T33: 1.1000 T12: -0.1904 REMARK 3 T13: -0.5859 T23: -0.4724 REMARK 3 L TENSOR REMARK 3 L11: 1.2154 L22: 1.6357 REMARK 3 L33: 2.3005 L12: 0.5213 REMARK 3 L13: -0.2963 L23: -0.3783 REMARK 3 S TENSOR REMARK 3 S11: 0.9613 S12: -0.0910 S13: 0.6243 REMARK 3 S21: -0.3213 S22: 1.5267 S23: -1.8652 REMARK 3 S31: -0.0275 S32: 0.8254 S33: 1.9878 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9T9N COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-NOV-25. REMARK 100 THE DEPOSITION ID IS D_1292149084. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-JUL-24 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.87313 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.15 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48803 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.890 REMARK 200 RESOLUTION RANGE LOW (A) : 76.930 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.89 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.93 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 6.90 REMARK 200 R MERGE FOR SHELL (I) : 1.94500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: ORTHORHOMBIC CRYSTALS OF 300X200 UM REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BISTRIS PH 5.5; 0.2M MGCL2; 30% REMARK 280 PEG3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 38.16650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.30750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.46300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.30750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 38.16650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.46300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 201 REMARK 465 ASP A 202 REMARK 465 GLU A 271 REMARK 465 GLN A 272 REMARK 465 ARG A 273 REMARK 465 ALA A 274 REMARK 465 PRO A 275 REMARK 465 ALA A 276 REMARK 465 ARG A 277 REMARK 465 PRO A 278 REMARK 465 ALA A 279 REMARK 465 ALA A 280 REMARK 465 THR A 281 REMARK 465 PRO A 282 REMARK 465 ALA A 283 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 SER B 197 REMARK 465 LYS B 198 REMARK 465 GLU B 199 REMARK 465 GLY B 200 REMARK 465 LEU B 201 REMARK 465 ASP B 202 REMARK 465 ALA B 270 REMARK 465 GLU B 271 REMARK 465 GLN B 272 REMARK 465 ARG B 273 REMARK 465 ALA B 274 REMARK 465 PRO B 275 REMARK 465 ALA B 276 REMARK 465 ARG B 277 REMARK 465 PRO B 278 REMARK 465 ALA B 279 REMARK 465 ALA B 280 REMARK 465 THR B 281 REMARK 465 PRO B 282 REMARK 465 ALA B 283 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 41 NE CZ NH1 NH2 REMARK 470 GLU A 57 CG CD OE1 OE2 REMARK 470 LYS A 76 CE NZ REMARK 470 ARG A 79 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 82 CG CD CE NZ REMARK 470 ARG A 87 NE CZ NH1 NH2 REMARK 470 GLU A 130 CG CD OE1 OE2 REMARK 470 LYS A 166 CD CE NZ REMARK 470 LYS A 167 CG CD CE NZ REMARK 470 LYS A 196 CD CE NZ REMARK 470 LYS A 198 CD CE NZ REMARK 470 GLU A 263 CG CD OE1 OE2 REMARK 470 ARG B 41 NE CZ NH1 NH2 REMARK 470 LYS B 76 CD CE NZ REMARK 470 ARG B 79 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 82 CG CD CE NZ REMARK 470 ARG B 87 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 113 CG CD OE1 NE2 REMARK 470 LYS B 131 CG CD CE NZ REMARK 470 LYS B 166 CG CD CE NZ REMARK 470 LYS B 167 CG CD CE NZ REMARK 470 LYS B 196 CG CD CE NZ REMARK 470 THR B 203 OG1 CG2 REMARK 470 LYS B 223 CG CD CE NZ REMARK 470 GLU B 263 CG CD OE1 OE2 REMARK 470 ASP B 268 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 403 O HOH A 453 2.01 REMARK 500 O HOH A 403 O HOH A 499 2.05 REMARK 500 NZ LYS A 81 O HOH A 401 2.08 REMARK 500 O HOH B 461 O HOH B 473 2.12 REMARK 500 OD1 ASP B 190 O HOH B 401 2.15 REMARK 500 OE2 GLU A 189 O HOH A 402 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 1 79.26 -116.22 REMARK 500 LYS A 29 -35.13 -131.24 REMARK 500 ASN A 40 132.63 85.93 REMARK 500 ARG A 41 -40.93 89.55 REMARK 500 ARG A 185 -74.11 -128.36 REMARK 500 GLU A 199 -161.20 -103.79 REMARK 500 HIS A 228 -55.86 68.83 REMARK 500 ALA A 252 -107.13 -82.25 REMARK 500 ASN B 40 139.31 85.55 REMARK 500 ARG B 41 -32.17 76.90 REMARK 500 THR B 85 57.10 -118.89 REMARK 500 ARG B 185 -74.64 -129.61 REMARK 500 HIS B 228 -53.23 72.40 REMARK 500 CYS B 236 93.74 -163.35 REMARK 500 ASP B 237 37.24 -78.65 REMARK 500 ALA B 252 -102.70 -79.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 8 OD2 REMARK 620 2 GLN A 10 OE1 102.5 REMARK 620 3 ASP A 37 OD2 93.3 97.3 REMARK 620 4 HOH A 403 O 89.8 146.7 50.7 REMARK 620 5 HOH A 430 O 83.7 88.1 174.3 124.2 REMARK 620 6 HOH A 453 O 95.9 157.9 93.6 43.7 81.9 REMARK 620 7 HOH A 472 O 169.5 83.2 94.8 90.0 87.7 76.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 303 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 26 OD2 REMARK 620 2 HOH A 414 O 89.5 REMARK 620 3 ASP B 154 O 169.5 89.7 REMARK 620 4 ASP B 154 OD1 91.3 178.2 89.2 REMARK 620 5 HOH B 405 O 94.4 97.6 96.1 84.0 REMARK 620 6 HOH B 434 O 84.9 87.0 84.7 91.4 175.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 154 O REMARK 620 2 ASP A 154 OD1 82.7 REMARK 620 3 HOH A 431 O 38.6 53.5 REMARK 620 4 HOH A 443 O 36.9 53.0 2.9 REMARK 620 5 ASP B 26 OD2 38.7 52.3 1.4 2.1 REMARK 620 6 HOH B 420 O 36.7 54.5 1.9 2.0 2.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 8 OD2 REMARK 620 2 GLN B 10 NE2 104.3 REMARK 620 3 ASP B 37 OD2 96.5 102.1 REMARK 620 4 HOH B 418 O 93.3 159.8 85.6 REMARK 620 5 HOH B 419 O 169.4 77.5 93.3 83.5 REMARK 620 6 HOH B 431 O 88.9 85.8 168.9 84.4 80.8 REMARK 620 N 1 2 3 4 5 DBREF 9T9N A 1 283 UNP Q9I5U7 APAH_PSEAE 1 283 DBREF 9T9N B 1 283 UNP Q9I5U7 APAH_PSEAE 1 283 SEQADV 9T9N GLY A -2 UNP Q9I5U7 EXPRESSION TAG SEQADV 9T9N SER A -1 UNP Q9I5U7 EXPRESSION TAG SEQADV 9T9N HIS A 0 UNP Q9I5U7 EXPRESSION TAG SEQADV 9T9N GLY B -2 UNP Q9I5U7 EXPRESSION TAG SEQADV 9T9N SER B -1 UNP Q9I5U7 EXPRESSION TAG SEQADV 9T9N HIS B 0 UNP Q9I5U7 EXPRESSION TAG SEQRES 1 A 286 GLY SER HIS MET ALA VAL TYR ALA VAL GLY ASP LEU GLN SEQRES 2 A 286 GLY CYS LEU ASP PRO LEU LYS CYS LEU LEU GLU ARG VAL SEQRES 3 A 286 ALA PHE ASP PRO ALA LYS ASP ARG LEU TRP LEU VAL GLY SEQRES 4 A 286 ASP LEU VAL ASN ARG GLY PRO GLN SER LEU GLU THR LEU SEQRES 5 A 286 ARG PHE LEU TYR ALA MET ARG GLU SER VAL VAL SER VAL SEQRES 6 A 286 LEU GLY ASN HIS ASP LEU HIS LEU LEU ALA VAL ALA HIS SEQRES 7 A 286 LYS SER GLU ARG LEU LYS LYS SER ASP THR LEU ARG GLU SEQRES 8 A 286 ILE LEU GLU ALA PRO ASP ARG GLU PRO LEU LEU ASP TRP SEQRES 9 A 286 LEU ARG ARG LEU PRO LEU LEU HIS TYR ASP GLU GLN ARG SEQRES 10 A 286 LYS VAL ALA LEU VAL HIS ALA GLY ILE PRO PRO GLN TRP SEQRES 11 A 286 SER LEU GLU LYS ALA ARG LEU ARG ALA ALA GLU VAL GLU SEQRES 12 A 286 GLN ALA LEU ARG ASP ASP GLN ARG LEU PRO LEU PHE LEU SEQRES 13 A 286 ASP GLY MET TYR GLY ASN GLU PRO ALA LYS TRP ASP LYS SEQRES 14 A 286 LYS LEU HIS GLY ILE ASP ARG LEU ARG VAL ILE THR ASN SEQRES 15 A 286 TYR PHE THR ARG MET ARG PHE CYS THR GLU ASP GLY LYS SEQRES 16 A 286 LEU ASP LEU LYS SER LYS GLU GLY LEU ASP THR ALA PRO SEQRES 17 A 286 PRO GLY TYR ALA PRO TRP PHE SER PHE PRO SER ARG LYS SEQRES 18 A 286 THR ARG GLY GLU LYS ILE ILE PHE GLY HIS TRP ALA ALA SEQRES 19 A 286 LEU GLU GLY HIS CYS ASP GLU PRO GLY LEU PHE ALA LEU SEQRES 20 A 286 ASP THR GLY CYS VAL TRP GLY ALA ARG MET THR LEU LEU SEQRES 21 A 286 ASN VAL ASP SER GLY GLU ARG LEU SER CYS ASP CYS ALA SEQRES 22 A 286 GLU GLN ARG ALA PRO ALA ARG PRO ALA ALA THR PRO ALA SEQRES 1 B 286 GLY SER HIS MET ALA VAL TYR ALA VAL GLY ASP LEU GLN SEQRES 2 B 286 GLY CYS LEU ASP PRO LEU LYS CYS LEU LEU GLU ARG VAL SEQRES 3 B 286 ALA PHE ASP PRO ALA LYS ASP ARG LEU TRP LEU VAL GLY SEQRES 4 B 286 ASP LEU VAL ASN ARG GLY PRO GLN SER LEU GLU THR LEU SEQRES 5 B 286 ARG PHE LEU TYR ALA MET ARG GLU SER VAL VAL SER VAL SEQRES 6 B 286 LEU GLY ASN HIS ASP LEU HIS LEU LEU ALA VAL ALA HIS SEQRES 7 B 286 LYS SER GLU ARG LEU LYS LYS SER ASP THR LEU ARG GLU SEQRES 8 B 286 ILE LEU GLU ALA PRO ASP ARG GLU PRO LEU LEU ASP TRP SEQRES 9 B 286 LEU ARG ARG LEU PRO LEU LEU HIS TYR ASP GLU GLN ARG SEQRES 10 B 286 LYS VAL ALA LEU VAL HIS ALA GLY ILE PRO PRO GLN TRP SEQRES 11 B 286 SER LEU GLU LYS ALA ARG LEU ARG ALA ALA GLU VAL GLU SEQRES 12 B 286 GLN ALA LEU ARG ASP ASP GLN ARG LEU PRO LEU PHE LEU SEQRES 13 B 286 ASP GLY MET TYR GLY ASN GLU PRO ALA LYS TRP ASP LYS SEQRES 14 B 286 LYS LEU HIS GLY ILE ASP ARG LEU ARG VAL ILE THR ASN SEQRES 15 B 286 TYR PHE THR ARG MET ARG PHE CYS THR GLU ASP GLY LYS SEQRES 16 B 286 LEU ASP LEU LYS SER LYS GLU GLY LEU ASP THR ALA PRO SEQRES 17 B 286 PRO GLY TYR ALA PRO TRP PHE SER PHE PRO SER ARG LYS SEQRES 18 B 286 THR ARG GLY GLU LYS ILE ILE PHE GLY HIS TRP ALA ALA SEQRES 19 B 286 LEU GLU GLY HIS CYS ASP GLU PRO GLY LEU PHE ALA LEU SEQRES 20 B 286 ASP THR GLY CYS VAL TRP GLY ALA ARG MET THR LEU LEU SEQRES 21 B 286 ASN VAL ASP SER GLY GLU ARG LEU SER CYS ASP CYS ALA SEQRES 22 B 286 GLU GLN ARG ALA PRO ALA ARG PRO ALA ALA THR PRO ALA HET MG A 301 1 HET MG B 301 1 HET MG B 302 1 HET MG B 303 1 HETNAM MG MAGNESIUM ION FORMUL 3 MG 4(MG 2+) FORMUL 7 HOH *237(H2 O) HELIX 1 AA1 CYS A 12 VAL A 23 1 12 HELIX 2 AA2 GLN A 44 MET A 55 1 12 HELIX 3 AA3 GLY A 64 HIS A 75 1 12 HELIX 4 AA4 LEU A 86 ALA A 92 1 7 HELIX 5 AA5 ASP A 94 ARG A 104 1 11 HELIX 6 AA6 SER A 128 ARG A 144 1 17 HELIX 7 AA7 GLN A 147 MET A 156 1 10 HELIX 8 AA8 HIS A 169 MET A 184 1 16 HELIX 9 AA9 PHE A 212 PHE A 214 5 3 HELIX 10 AB1 TRP A 229 GLU A 233 5 5 HELIX 11 AB2 GLY A 247 GLY A 251 5 5 HELIX 12 AB3 CYS B 12 ALA B 24 1 13 HELIX 13 AB4 GLN B 44 MET B 55 1 12 HELIX 14 AB5 GLY B 64 HIS B 75 1 12 HELIX 15 AB6 LEU B 86 GLU B 91 1 6 HELIX 16 AB7 ASP B 94 ARG B 104 1 11 HELIX 17 AB8 SER B 128 ARG B 144 1 17 HELIX 18 AB9 ARG B 148 MET B 156 1 9 HELIX 19 AC1 HIS B 169 MET B 184 1 16 HELIX 20 AC2 PHE B 212 PHE B 214 5 3 HELIX 21 AC3 TRP B 229 GLU B 233 5 5 HELIX 22 AC4 GLY B 247 GLY B 251 5 5 SHEET 1 AA1 5 VAL A 59 SER A 61 0 SHEET 2 AA1 5 ARG A 31 LEU A 34 1 N LEU A 32 O VAL A 60 SHEET 3 AA1 5 VAL A 3 VAL A 6 1 N TYR A 4 O TRP A 33 SHEET 4 AA1 5 ARG A 253 ASN A 258 -1 O LEU A 257 N ALA A 5 SHEET 5 AA1 5 ARG A 264 ASP A 268 -1 O LEU A 265 N LEU A 256 SHEET 1 AA2 4 LEU A 108 ASP A 111 0 SHEET 2 AA2 4 VAL A 116 VAL A 119 -1 O LEU A 118 N HIS A 109 SHEET 3 AA2 4 LYS A 223 PHE A 226 1 O ILE A 225 N ALA A 117 SHEET 4 AA2 4 LEU A 241 ALA A 243 1 O PHE A 242 N PHE A 226 SHEET 1 AA3 2 PHE A 186 CYS A 187 0 SHEET 2 AA3 2 ALA A 209 PRO A 210 -1 O ALA A 209 N CYS A 187 SHEET 1 AA4 5 VAL B 59 SER B 61 0 SHEET 2 AA4 5 ARG B 31 LEU B 34 1 N LEU B 32 O VAL B 60 SHEET 3 AA4 5 VAL B 3 VAL B 6 1 N TYR B 4 O TRP B 33 SHEET 4 AA4 5 ARG B 253 ASN B 258 -1 O LEU B 257 N ALA B 5 SHEET 5 AA4 5 ARG B 264 ASP B 268 -1 O LEU B 265 N LEU B 256 SHEET 1 AA5 4 LEU B 108 ASP B 111 0 SHEET 2 AA5 4 VAL B 116 VAL B 119 -1 O VAL B 116 N ASP B 111 SHEET 3 AA5 4 LYS B 223 PHE B 226 1 O ILE B 225 N ALA B 117 SHEET 4 AA5 4 LEU B 241 ALA B 243 1 O PHE B 242 N PHE B 226 SHEET 1 AA6 2 PHE B 186 CYS B 187 0 SHEET 2 AA6 2 ALA B 209 PRO B 210 -1 O ALA B 209 N CYS B 187 SSBOND 1 CYS A 18 CYS A 267 1555 1555 2.05 SSBOND 2 CYS A 248 CYS A 269 1555 1555 2.04 SSBOND 3 CYS B 18 CYS B 267 1555 1555 2.05 SSBOND 4 CYS B 248 CYS B 269 1555 1555 2.04 LINK OD2 ASP A 8 MG MG A 301 1555 1555 2.05 LINK OE1 GLN A 10 MG MG A 301 1555 1555 2.13 LINK OD2 ASP A 26 MG MG B 303 1555 1555 2.12 LINK OD2 ASP A 37 MG MG A 301 1555 1555 2.00 LINK O ASP A 154 MG MG B 302 1555 1565 2.11 LINK OD1 ASP A 154 MG MG B 302 1555 1565 2.06 LINK MG MG A 301 O HOH A 403 1555 1555 2.90 LINK MG MG A 301 O HOH A 430 1555 1555 2.17 LINK MG MG A 301 O HOH A 453 1555 1555 2.05 LINK MG MG A 301 O HOH A 472 1555 1555 2.12 LINK O HOH A 414 MG MG B 303 1555 1555 2.06 LINK O HOH A 431 MG MG B 302 1545 1555 2.03 LINK O HOH A 443 MG MG B 302 1545 1555 2.10 LINK OD2 ASP B 8 MG MG B 301 1555 1555 2.12 LINK NE2 GLN B 10 MG MG B 301 1555 1555 2.01 LINK OD2 ASP B 26 MG MG B 302 1555 1555 2.07 LINK OD2 ASP B 37 MG MG B 301 1555 1555 1.98 LINK O ASP B 154 MG MG B 303 1555 1555 2.04 LINK OD1 ASP B 154 MG MG B 303 1555 1555 2.18 LINK MG MG B 301 O HOH B 418 1555 1555 2.33 LINK MG MG B 301 O HOH B 419 1555 1555 2.23 LINK MG MG B 301 O HOH B 431 1555 1555 2.25 LINK MG MG B 302 O HOH B 420 1555 1555 2.03 LINK MG MG B 303 O HOH B 405 1555 1555 2.03 LINK MG MG B 303 O HOH B 434 1555 1555 2.04 CISPEP 1 GLU A 160 PRO A 161 0 0.18 CISPEP 2 GLU B 160 PRO B 161 0 -2.03 CRYST1 76.333 76.926 102.615 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013100 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013000 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009745 0.00000 CONECT 76 4194 CONECT 92 4194 CONECT 149 2103 CONECT 216 4197 CONECT 305 4194 CONECT 1962 2117 CONECT 2103 149 CONECT 2117 1962 CONECT 2179 4195 CONECT 2196 4195 CONECT 2252 4181 CONECT 2319 4196 CONECT 2408 4195 CONECT 3339 4197 CONECT 3342 4197 CONECT 4040 4192 CONECT 4181 2252 CONECT 4192 4040 CONECT 4194 76 92 305 4200 CONECT 4194 4227 4250 4269 CONECT 4195 2179 2196 2408 4361 CONECT 4195 4362 4374 CONECT 4196 2319 4363 CONECT 4197 216 3339 3342 4211 CONECT 4197 4348 4377 CONECT 4200 4194 CONECT 4211 4197 CONECT 4227 4194 CONECT 4250 4194 CONECT 4269 4194 CONECT 4348 4197 CONECT 4361 4195 CONECT 4362 4195 CONECT 4363 4196 CONECT 4374 4195 CONECT 4377 4197 MASTER 519 0 4 22 22 0 0 6 4415 2 36 44 END