HEADER IMMUNE SYSTEM 15-DEC-25 9TML TITLE STRUCTURE OF TCR-B TARGETING GPC3 [FLAELAYDL] PEPTIDE BOUND TO HLA- TITLE 2 A*02:01 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MHC CLASS I ANTIGEN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: THERE IS A NON-NATIVE GLYCINE RESIDUE IN POSITION 2. COMPND 6 THIS NON-NATIVE RESIDUE IS A PRODUCT OF THE CLONING PROCEDURES.; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: BETA-2-MICROGLOBULIN; COMPND 9 CHAIN: B; COMPND 10 ENGINEERED: YES; COMPND 11 OTHER_DETAILS: THERE IS A NON-NATIVE GLYCINE RESIDUE IN POSITION 2. COMPND 12 THIS NON-NATIVE RESIDUE IS A PRODUCT OF THE CLONING PROCEDURES.; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: TCR-B ALPHA CHAIN; COMPND 15 CHAIN: C; COMPND 16 ENGINEERED: YES; COMPND 17 OTHER_DETAILS: THERE IS A T TO C MUTATION AT POSITION 160. THIS NON- COMPND 18 NATIVE CYSTEINE PROMOTES COVALENT DIMERIZATION OF THE TWO TCR CHAINS COMPND 19 THROUGH THE FORMATION OF AN INTER-CHAIN DISULFIDE BOND. IN ADDITION, COMPND 20 N TO Q MUTATIONS AT POSITIONS 145, 179 AND 190 WERE INTRODUCED TO COMPND 21 PREVENT N-GLYCOSYLATION IN THE CONSTANT REGION OF THE TCR.; COMPND 22 MOL_ID: 4; COMPND 23 MOLECULE: TCR-B BETA CHAIN; COMPND 24 CHAIN: D; COMPND 25 ENGINEERED: YES; COMPND 26 OTHER_DETAILS: THERE IS A T TO C MUTATION AT POSITION 171. THIS NON- COMPND 27 NATIVE CYSTEINE PROMOTES COVALENT DIMERIZATION OF THE TWO TCR CHAINS COMPND 28 THROUGH THE FORMATION OF AN INTER-CHAIN DISULFIDE BOND. IN ADDITION, COMPND 29 N TO Q MUTATION AT POSITION 184 WAS INTRODUCED TO PREVENT N- COMPND 30 GLYCOSYLATION IN THE CONSTANT REGION OF THE TCR.; COMPND 31 MOL_ID: 5; COMPND 32 MOLECULE: GLYPICAN-3 BETA SUBUNIT; COMPND 33 CHAIN: P; COMPND 34 ENGINEERED: YES; COMPND 35 OTHER_DETAILS: THIS IS A PEPTIDE DERIVED FROM HUMAN GLIPICAN 3 THAT COMPND 36 HAS BEEN SYNTHESIZED CHEMICALLY. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HLA-A; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: B2M, CDABP0092, HDCMA22P; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 17 ORGANISM_TAXID: 9606; SOURCE 18 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 19 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 20 MOL_ID: 4; SOURCE 21 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 22 ORGANISM_TAXID: 9606; SOURCE 23 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 24 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 25 MOL_ID: 5; SOURCE 26 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 27 ORGANISM_COMMON: HUMAN; SOURCE 28 ORGANISM_TAXID: 9606; SOURCE 29 GENE: GPC3, OCI5; SOURCE 30 EXPRESSION_SYSTEM: SYNTHETIC CONSTRUCT; SOURCE 31 EXPRESSION_SYSTEM_TAXID: 32630 KEYWDS MHC; HLA; TCR; TUMOR; ANTIGEN; STRUCTURE; HEPATOCARCINOMA; X-RAY, KEYWDS 2 IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR L.OYON-OLEA,J.LOPEZ-SAGASETA REVDAT 1 04-NOV-26 9TML 0 JRNL AUTH J.LOPEZ-SAGASETA,L.OYON-OLEA JRNL TITL STRUCTURE-FUNCTION PROFILING IDENTIFIES DETERMINANTS OF JRNL TITL 2 TCR-T CELL THERAPEUTIC EFFICACY JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.20 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.010 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.2 REMARK 3 NUMBER OF REFLECTIONS : 71652 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.265 REMARK 3 R VALUE (WORKING SET) : 0.263 REMARK 3 FREE R VALUE : 0.294 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 6826 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.2000 - 6.0500 0.92 4119 302 0.2339 0.2760 REMARK 3 2 6.0500 - 4.8100 0.93 4272 170 0.2197 0.2190 REMARK 3 3 4.8000 - 4.2000 0.93 4312 179 0.1813 0.2243 REMARK 3 4 4.2000 - 3.8200 0.96 4372 237 0.1942 0.2442 REMARK 3 5 3.8200 - 3.5400 0.96 4371 250 0.1941 0.2395 REMARK 3 6 3.5400 - 3.3300 0.93 4257 219 0.2108 0.2339 REMARK 3 7 3.3300 - 3.1700 0.96 4330 269 0.2196 0.2857 REMARK 3 8 3.1700 - 3.0300 0.95 4376 236 0.2214 0.2469 REMARK 3 9 3.0300 - 2.9100 0.95 4263 273 0.2500 0.2557 REMARK 3 10 2.9100 - 2.8100 0.95 4383 226 0.2691 0.3035 REMARK 3 11 2.8100 - 2.7200 0.95 4290 268 0.2898 0.3478 REMARK 3 12 2.7200 - 2.6500 0.95 4294 231 0.3029 0.3559 REMARK 3 13 2.6500 - 2.5800 0.94 4291 239 0.3123 0.3730 REMARK 3 14 2.5800 - 2.5100 0.94 4291 244 0.3178 0.3450 REMARK 3 15 2.5100 - 2.4600 0.94 4272 254 0.3326 0.3392 REMARK 3 16 2.4600 - 2.4000 0.94 4296 222 0.3199 0.3273 REMARK 3 17 2.4000 - 2.3600 0.93 4274 171 0.3189 0.3384 REMARK 3 18 2.3600 - 2.3100 0.90 4134 224 0.3139 0.3673 REMARK 3 19 2.3100 - 2.2700 0.91 4133 214 0.3240 0.3307 REMARK 3 20 2.2700 - 2.2300 0.92 4183 220 0.3353 0.3166 REMARK 3 21 2.2300 - 2.2000 0.93 4284 235 0.3585 0.3527 REMARK 3 22 2.2000 - 2.1600 0.92 4191 233 0.3639 0.4099 REMARK 3 23 2.1600 - 2.1300 0.93 4296 194 0.3577 0.3966 REMARK 3 24 2.1300 - 2.1000 0.93 4236 216 0.3591 0.3899 REMARK 3 25 2.1000 - 2.0700 0.92 4180 242 0.3682 0.3651 REMARK 3 26 2.0700 - 2.0500 0.92 4277 176 0.3545 0.3340 REMARK 3 27 2.0500 - 2.0200 0.91 4129 243 0.3714 0.3820 REMARK 3 28 2.0200 - 2.0000 0.91 4160 215 0.3758 0.4157 REMARK 3 29 2.0000 - 1.9700 0.91 4224 199 0.3861 0.4105 REMARK 3 30 1.9700 - 1.9500 0.91 4085 225 0.3683 0.3762 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.327 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.985 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.14 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.44 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 5727 REMARK 3 ANGLE : 0.663 7818 REMARK 3 CHIRALITY : 0.047 859 REMARK 3 PLANARITY : 0.006 1016 REMARK 3 DIHEDRAL : 7.924 839 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -31.6593 -17.4700 46.9009 REMARK 3 T TENSOR REMARK 3 T11: 0.1564 T22: 0.2053 REMARK 3 T33: 0.2176 T12: 0.0029 REMARK 3 T13: -0.0279 T23: -0.0414 REMARK 3 L TENSOR REMARK 3 L11: 0.8461 L22: 0.4323 REMARK 3 L33: 1.1052 L12: 0.1287 REMARK 3 L13: -0.5037 L23: -0.0710 REMARK 3 S TENSOR REMARK 3 S11: 0.0090 S12: 0.1515 S13: 0.0086 REMARK 3 S21: 0.0083 S22: -0.0621 S23: 0.1683 REMARK 3 S31: -0.0736 S32: -0.3864 S33: 0.0138 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9TML COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-OCT-26. REMARK 100 THE DEPOSITION ID IS D_1292152600. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-NOV-24 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALBA REMARK 200 BEAMLINE : XALOC REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : M REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS BUILT=20250119 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 1.13.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 72498 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 45.140 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.15600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.99 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 1.07900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.3 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.84 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.55 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M NACL 0.1 M MES PH 6.0 20% PEG REMARK 280 6000, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 69.18850 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.89000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 69.18850 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 40.89000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 PRO A 277 REMARK 465 SER A 278 REMARK 465 SER A 279 REMARK 465 MET B -1 REMARK 465 GLY B 0 REMARK 465 ASP C 126 REMARK 465 SER C 127 REMARK 465 LYS C 128 REMARK 465 SER C 129 REMARK 465 SER C 130 REMARK 465 ASP C 131 REMARK 465 LYS C 132 REMARK 465 SER C 133 REMARK 465 SER C 142 REMARK 465 GLN C 143 REMARK 465 THR C 144 REMARK 465 GLN C 145 REMARK 465 VAL C 146 REMARK 465 SER C 147 REMARK 465 GLN C 148 REMARK 465 SER C 149 REMARK 465 LYS C 150 REMARK 465 ASP C 163 REMARK 465 MET C 164 REMARK 465 ARG C 165 REMARK 465 SER C 166 REMARK 465 MET C 167 REMARK 465 ASP C 168 REMARK 465 PHE C 169 REMARK 465 SER C 178 REMARK 465 GLN C 179 REMARK 465 LYS C 180 REMARK 465 SER C 181 REMARK 465 ASP C 182 REMARK 465 PHE C 183 REMARK 465 ALA C 184 REMARK 465 THR C 198 REMARK 465 PHE C 199 REMARK 465 PHE C 200 REMARK 465 PRO C 201 REMARK 465 SER C 202 REMARK 465 PRO C 203 REMARK 465 GLU C 204 REMARK 465 SER C 205 REMARK 465 SER C 206 REMARK 465 ALA C 207 REMARK 465 HIS C 208 REMARK 465 HIS C 209 REMARK 465 HIS C 210 REMARK 465 HIS C 211 REMARK 465 HIS C 212 REMARK 465 HIS C 213 REMARK 465 VAL D 1 REMARK 465 LEU D 117 REMARK 465 LYS D 118 REMARK 465 TRP D 160 REMARK 465 VAL D 161 REMARK 465 ASN D 162 REMARK 465 GLY D 163 REMARK 465 LYS D 164 REMARK 465 GLU D 165 REMARK 465 VAL D 166 REMARK 465 ALA D 182 REMARK 465 LEU D 183 REMARK 465 GLN D 184 REMARK 465 SER D 197 REMARK 465 ALA D 198 REMARK 465 THR D 199 REMARK 465 PHE D 200 REMARK 465 TRP D 201 REMARK 465 GLN D 202 REMARK 465 ASN D 203 REMARK 465 PRO D 204 REMARK 465 ARG D 205 REMARK 465 ASN D 206 REMARK 465 HIS D 207 REMARK 465 PHE D 208 REMARK 465 ARG D 209 REMARK 465 GLU D 222 REMARK 465 TRP D 223 REMARK 465 THR D 224 REMARK 465 GLN D 225 REMARK 465 ASP D 226 REMARK 465 ARG D 227 REMARK 465 ALA D 228 REMARK 465 LYS D 229 REMARK 465 PRO D 230 REMARK 465 GLU D 238 REMARK 465 ALA D 239 REMARK 465 TRP D 240 REMARK 465 GLY D 241 REMARK 465 ARG D 242 REMARK 465 ALA D 243 REMARK 465 ASP D 244 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 59 CG CD OE1 OE2 REMARK 470 SER A 89 OG REMARK 470 GLU A 90 CG CD OE1 OE2 REMARK 470 ALA A 91 CB REMARK 470 LYS A 122 CG CD CE NZ REMARK 470 ARG A 132 CG CD NE CZ NH1 NH2 REMARK 470 HIS A 146 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 155 CG CD OE1 OE2 REMARK 470 LYS A 177 CG CD CE NZ REMARK 470 GLU A 178 CG CD OE1 OE2 REMARK 470 VAL A 195 CG1 CG2 REMARK 470 ASP A 197 CG OD1 OD2 REMARK 470 HIS A 198 CG ND1 CD2 CE1 NE2 REMARK 470 THR A 226 OG1 CG2 REMARK 470 GLN A 227 CG CD OE1 NE2 REMARK 470 ASP A 228 CG OD1 OD2 REMARK 470 SER A 252 OG REMARK 470 GLN A 256 CG CD OE1 NE2 REMARK 470 LYS A 269 CG CD CE NZ REMARK 470 ILE B 1 CG1 CG2 CD1 REMARK 470 LYS B 19 CG CD CE NZ REMARK 470 ASP B 34 CG OD1 OD2 REMARK 470 GLU B 36 CG CD OE1 OE2 REMARK 470 GLU B 44 CG CD OE1 OE2 REMARK 470 GLU B 47 CG CD OE1 OE2 REMARK 470 LYS B 48 CG CD CE NZ REMARK 470 LYS B 58 CG CD CE NZ REMARK 470 GLU B 69 CG CD OE1 OE2 REMARK 470 GLU B 74 CG CD OE1 OE2 REMARK 470 LYS B 75 CB CG CD CE NZ REMARK 470 GLU B 77 CG CD OE1 OE2 REMARK 470 GLN B 89 CG CD OE1 NE2 REMARK 470 LYS B 94 CG CD CE NZ REMARK 470 ASP B 98 CG OD1 OD2 REMARK 470 MET B 99 CG SD CE REMARK 470 ARG C 10 CG CD NE CZ NH1 NH2 REMARK 470 SER C 14 OG REMARK 470 ARG C 41 CG CD NE CZ NH1 NH2 REMARK 470 ARG C 77 CG CD NE CZ NH1 NH2 REMARK 470 HIS C 82 CG ND1 CD2 CE1 NE2 REMARK 470 TRP C 83 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP C 83 CZ3 CH2 REMARK 470 ARG C 107 CG CD NE CZ NH1 NH2 REMARK 470 PHE C 111 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASN C 113 CG OD1 ND2 REMARK 470 ILE C 114 CG1 CG2 CD1 REMARK 470 GLN C 115 CG CD OE1 NE2 REMARK 470 ASN C 116 CG OD1 ND2 REMARK 470 ASP C 118 CG OD1 OD2 REMARK 470 VAL C 121 CG1 CG2 REMARK 470 TYR C 122 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLN C 123 CG CD OE1 NE2 REMARK 470 LEU C 124 CG CD1 CD2 REMARK 470 ARG C 125 CG CD NE CZ NH1 NH2 REMARK 470 VAL C 134 CG1 CG2 REMARK 470 LEU C 136 CG CD1 CD2 REMARK 470 THR C 138 OG1 CG2 REMARK 470 ASP C 139 CG OD1 OD2 REMARK 470 ASP C 141 CG OD1 OD2 REMARK 470 ASP C 151 CG OD1 OD2 REMARK 470 SER C 152 OG REMARK 470 ASP C 153 CG OD1 OD2 REMARK 470 VAL C 154 CG1 CG2 REMARK 470 TYR C 155 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS C 159 CG CD CE NZ REMARK 470 VAL C 161 CG1 CG2 REMARK 470 LYS C 170 CG CD CE NZ REMARK 470 SER C 171 OG REMARK 470 SER C 173 OG REMARK 470 VAL C 175 CG1 CG2 REMARK 470 CYS C 185 SG REMARK 470 ASN C 187 CG OD1 ND2 REMARK 470 GLN C 190 CG CD OE1 NE2 REMARK 470 ASN C 191 CG OD1 ND2 REMARK 470 SER C 192 OG REMARK 470 ILE C 193 CG1 CG2 CD1 REMARK 470 ILE C 194 CG1 CG2 CD1 REMARK 470 GLU C 196 CG CD OE1 OE2 REMARK 470 GLU D 5 CG CD OE1 OE2 REMARK 470 ASN D 7 CG OD1 ND2 REMARK 470 ARG D 11 CG CD NE CZ NH1 NH2 REMARK 470 LEU D 12 CG CD1 CD2 REMARK 470 VAL D 13 CG1 CG2 REMARK 470 PRO D 14 CG CD REMARK 470 ARG D 15 CG CD NE CZ NH1 NH2 REMARK 470 GLN D 17 CG CD OE1 NE2 REMARK 470 VAL D 19 CG1 CG2 REMARK 470 ARG D 22 CG CD NE CZ NH1 NH2 REMARK 470 ILE D 24 CG1 CG2 CD1 REMARK 470 LYS D 26 CG CD CE NZ REMARK 470 SER D 28 OG REMARK 470 LEU D 40 CG CD1 CD2 REMARK 470 GLN D 41 CG CD OE1 NE2 REMARK 470 LYS D 42 CG CD CE NZ REMARK 470 GLN D 43 CG CD OE1 NE2 REMARK 470 ASP D 55 CG OD1 OD2 REMARK 470 LYS D 56 CG CD CE NZ REMARK 470 GLU D 57 CG CD OE1 OE2 REMARK 470 LYS D 59 CG CD CE NZ REMARK 470 SER D 60 OG REMARK 470 LEU D 61 CG CD1 CD2 REMARK 470 ASP D 65 CG OD1 OD2 REMARK 470 ASP D 73 CG OD1 OD2 REMARK 470 SER D 84 OG REMARK 470 GLN D 85 CG CD OE1 NE2 REMARK 470 ARG D 110 CG CD NE CZ NH1 NH2 REMARK 470 VAL D 113 CG1 CG2 REMARK 470 LEU D 114 CG CD1 CD2 REMARK 470 GLU D 115 CG CD OE1 OE2 REMARK 470 ASP D 116 CG OD1 OD2 REMARK 470 ASN D 119 CG OD1 ND2 REMARK 470 VAL D 120 CG1 CG2 REMARK 470 PHE D 121 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU D 124 CG CD OE1 OE2 REMARK 470 VAL D 125 CG1 CG2 REMARK 470 VAL D 127 CG1 CG2 REMARK 470 GLU D 129 CG CD OE1 OE2 REMARK 470 SER D 131 OG REMARK 470 GLU D 132 CG CD OE1 OE2 REMARK 470 GLU D 134 CG CD OE1 OE2 REMARK 470 ILE D 135 CG1 CG2 CD1 REMARK 470 SER D 136 OG REMARK 470 HIS D 137 CG ND1 CD2 CE1 NE2 REMARK 470 THR D 138 OG1 CG2 REMARK 470 GLN D 139 CG CD OE1 NE2 REMARK 470 LYS D 140 CG CD CE NZ REMARK 470 THR D 142 OG1 CG2 REMARK 470 LEU D 143 CG CD1 CD2 REMARK 470 LEU D 146 CG CD1 CD2 REMARK 470 THR D 148 OG1 CG2 REMARK 470 HIS D 154 CG ND1 CD2 CE1 NE2 REMARK 470 VAL D 155 CG1 CG2 REMARK 470 GLU D 156 CG CD OE1 OE2 REMARK 470 LEU D 157 CG CD1 CD2 REMARK 470 SER D 158 OG REMARK 470 TRP D 159 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP D 159 CZ3 CH2 REMARK 470 HIS D 167 CG ND1 CD2 CE1 NE2 REMARK 470 VAL D 170 CG1 CG2 REMARK 470 GLN D 175 CG CD OE1 NE2 REMARK 470 LEU D 177 CG CD1 CD2 REMARK 470 LYS D 178 CG CD CE NZ REMARK 470 GLN D 180 CG CD OE1 NE2 REMARK 470 ASP D 185 CG OD1 OD2 REMARK 470 ARG D 187 CG CD NE CZ NH1 NH2 REMARK 470 LEU D 194 CG CD1 CD2 REMARK 470 GLN D 211 CG CD OE1 NE2 REMARK 470 VAL D 212 CG1 CG2 REMARK 470 GLN D 213 CG CD OE1 NE2 REMARK 470 LEU D 217 CG CD1 CD2 REMARK 470 SER D 218 OG REMARK 470 GLU D 219 CG CD OE1 OE2 REMARK 470 ASN D 220 CG OD1 ND2 REMARK 470 ASP D 221 CG OD1 OD2 REMARK 470 VAL D 231 CG1 CG2 REMARK 470 THR D 232 OG1 CG2 REMARK 470 GLN D 233 CG CD OE1 NE2 REMARK 470 ILE D 234 CG1 CG2 CD1 REMARK 470 VAL D 235 CG1 CG2 REMARK 470 SER D 236 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PRO C 112 CD PRO C 112 N -0.142 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 30 -127.68 58.21 REMARK 500 HIS A 115 107.99 -160.48 REMARK 500 GLN A 181 52.46 -93.37 REMARK 500 PRO D 123 -169.41 -79.81 REMARK 500 GLN D 139 -1.79 68.66 REMARK 500 PRO D 152 -159.88 -78.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 303 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 95 O REMARK 620 2 GLN A 97 OE1 143.4 REMARK 620 3 ALA A 118 O 80.6 114.8 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 304 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 164 OG1 REMARK 620 2 HOH A 466 O 73.5 REMARK 620 3 HOH A 472 O 100.2 92.7 REMARK 620 4 HOH A 497 O 70.8 133.1 65.3 REMARK 620 5 HOH C 430 O 140.7 134.9 103.8 91.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 305 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 219 O REMARK 620 2 ARG A 257 O 70.5 REMARK 620 3 THR A 259 OG1 80.5 127.3 REMARK 620 4 HOH A 479 O 141.5 73.1 113.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 306 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 222 O REMARK 620 2 HOH A 463 O 104.9 REMARK 620 3 HOH C 428 O 80.4 116.1 REMARK 620 4 HOH C 442 O 103.0 104.7 136.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 102 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 427 O REMARK 620 2 SER B 57 OG 92.9 REMARK 620 3 SER B 61 OG 80.3 94.4 REMARK 620 4 PHE B 62 O 138.6 127.8 101.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 103 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 427 O REMARK 620 2 ASP B 59 OD2 109.2 REMARK 620 3 HOH B 215 O 62.9 57.0 REMARK 620 4 HOH B 236 O 157.6 87.0 139.0 REMARK 620 5 HOH B 237 O 95.9 152.3 150.0 65.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA C 302 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER C 52 O REMARK 620 2 HOH C 420 O 57.1 REMARK 620 3 HOH C 442 O 99.5 77.9 REMARK 620 N 1 2 DBREF 9TML A 2 279 UNP A5I8L1 A5I8L1_HUMAN 9 286 DBREF 9TML B 1 99 UNP P61769 B2MG_HUMAN 21 119 DBREF 9TML C 1 213 PDB 9TML 9TML 1 213 DBREF 9TML D 1 244 PDB 9TML 9TML 1 244 DBREF 9TML P 1 9 UNP P51654 GPC3_HUMAN 522 530 SEQADV 9TML MET A 0 UNP A5I8L1 INITIATING METHIONINE SEQADV 9TML GLY A 1 UNP A5I8L1 EXPRESSION TAG SEQADV 9TML MET B -1 UNP P61769 INITIATING METHIONINE SEQADV 9TML GLY B 0 UNP P61769 EXPRESSION TAG SEQRES 1 A 280 MET GLY GLY SER HIS SER MET ARG TYR PHE PHE THR SER SEQRES 2 A 280 VAL SER ARG PRO GLY ARG GLY GLU PRO ARG PHE ILE ALA SEQRES 3 A 280 VAL GLY TYR VAL ASP ASP THR GLN PHE VAL ARG PHE ASP SEQRES 4 A 280 SER ASP ALA ALA SER GLN ARG MET GLU PRO ARG ALA PRO SEQRES 5 A 280 TRP ILE GLU GLN GLU GLY PRO GLU TYR TRP ASP GLY GLU SEQRES 6 A 280 THR ARG LYS VAL LYS ALA HIS SER GLN THR HIS ARG VAL SEQRES 7 A 280 ASP LEU GLY THR LEU ARG GLY TYR TYR ASN GLN SER GLU SEQRES 8 A 280 ALA GLY SER HIS THR VAL GLN ARG MET TYR GLY CYS ASP SEQRES 9 A 280 VAL GLY SER ASP TRP ARG PHE LEU ARG GLY TYR HIS GLN SEQRES 10 A 280 TYR ALA TYR ASP GLY LYS ASP TYR ILE ALA LEU LYS GLU SEQRES 11 A 280 ASP LEU ARG SER TRP THR ALA ALA ASP MET ALA ALA GLN SEQRES 12 A 280 THR THR LYS HIS LYS TRP GLU ALA ALA HIS VAL ALA GLU SEQRES 13 A 280 GLN LEU ARG ALA TYR LEU GLU GLY THR CYS VAL GLU TRP SEQRES 14 A 280 LEU ARG ARG TYR LEU GLU ASN GLY LYS GLU THR LEU GLN SEQRES 15 A 280 ARG THR ASP ALA PRO LYS THR HIS MET THR HIS HIS ALA SEQRES 16 A 280 VAL SER ASP HIS GLU ALA THR LEU ARG CYS TRP ALA LEU SEQRES 17 A 280 SER PHE TYR PRO ALA GLU ILE THR LEU THR TRP GLN ARG SEQRES 18 A 280 ASP GLY GLU ASP GLN THR GLN ASP THR GLU LEU VAL GLU SEQRES 19 A 280 THR ARG PRO ALA GLY ASP GLY THR PHE GLN LYS TRP ALA SEQRES 20 A 280 ALA VAL VAL VAL PRO SER GLY GLN GLU GLN ARG TYR THR SEQRES 21 A 280 CYS HIS VAL GLN HIS GLU GLY LEU PRO LYS PRO LEU THR SEQRES 22 A 280 LEU ARG TRP GLU PRO SER SER SEQRES 1 B 101 MET GLY ILE GLN ARG THR PRO LYS ILE GLN VAL TYR SER SEQRES 2 B 101 ARG HIS PRO ALA GLU ASN GLY LYS SER ASN PHE LEU ASN SEQRES 3 B 101 CYS TYR VAL SER GLY PHE HIS PRO SER ASP ILE GLU VAL SEQRES 4 B 101 ASP LEU LEU LYS ASN GLY GLU ARG ILE GLU LYS VAL GLU SEQRES 5 B 101 HIS SER ASP LEU SER PHE SER LYS ASP TRP SER PHE TYR SEQRES 6 B 101 LEU LEU TYR TYR THR GLU PHE THR PRO THR GLU LYS ASP SEQRES 7 B 101 GLU TYR ALA CYS ARG VAL ASN HIS VAL THR LEU SER GLN SEQRES 8 B 101 PRO LYS ILE VAL LYS TRP ASP ARG ASP MET SEQRES 1 C 213 ALA GLN SER VAL THR GLN PRO ASP ALA ARG VAL THR VAL SEQRES 2 C 213 SER GLU GLY ALA SER LEU GLN LEU ARG CYS LYS TYR SER SEQRES 3 C 213 TYR SER GLY THR PRO TYR LEU PHE TRP TYR VAL GLN TYR SEQRES 4 C 213 PRO ARG GLN GLY LEU GLN LEU LEU LEU LYS TYR TYR SER SEQRES 5 C 213 GLY ASP PRO VAL VAL GLN GLY VAL ASN GLY PHE GLU ALA SEQRES 6 C 213 GLU PHE SER LYS SER ASN SER SER PHE HIS LEU ARG LYS SEQRES 7 C 213 ALA SER VAL HIS TRP SER ASP SER ALA VAL TYR PHE CYS SEQRES 8 C 213 VAL LEU SER ALA LEU ALA GLN GLY LEU THR PHE GLY LEU SEQRES 9 C 213 GLY THR ARG VAL SER VAL PHE PRO ASN ILE GLN ASN PRO SEQRES 10 C 213 ASP PRO ALA VAL TYR GLN LEU ARG ASP SER LYS SER SER SEQRES 11 C 213 ASP LYS SER VAL CYS LEU PHE THR ASP PHE ASP SER GLN SEQRES 12 C 213 THR GLN VAL SER GLN SER LYS ASP SER ASP VAL TYR ILE SEQRES 13 C 213 THR ASP LYS CYS VAL LEU ASP MET ARG SER MET ASP PHE SEQRES 14 C 213 LYS SER ASN SER ALA VAL ALA TRP SER GLN LYS SER ASP SEQRES 15 C 213 PHE ALA CYS ALA ASN ALA PHE GLN ASN SER ILE ILE PRO SEQRES 16 C 213 GLU ASP THR PHE PHE PRO SER PRO GLU SER SER ALA HIS SEQRES 17 C 213 HIS HIS HIS HIS HIS SEQRES 1 D 244 VAL THR LEU LEU GLU GLN ASN PRO ARG TRP ARG LEU VAL SEQRES 2 D 244 PRO ARG GLY GLN ALA VAL ASN LEU ARG CYS ILE LEU LYS SEQRES 3 D 244 ASN SER GLN TYR PRO TRP MET SER TRP TYR GLN GLN ASP SEQRES 4 D 244 LEU GLN LYS GLN LEU GLN TRP LEU PHE THR LEU ARG SER SEQRES 5 D 244 PRO GLY ASP LYS GLU VAL LYS SER LEU PRO GLY ALA ASP SEQRES 6 D 244 TYR LEU ALA THR ARG VAL THR ASP THR GLU LEU ARG LEU SEQRES 7 D 244 GLN VAL ALA ASN MET SER GLN GLY ARG THR LEU TYR CYS SEQRES 8 D 244 THR CYS SER ALA GLY THR GLY GLY GLY ALA GLU GLN PHE SEQRES 9 D 244 PHE GLY PRO GLY THR ARG LEU THR VAL LEU GLU ASP LEU SEQRES 10 D 244 LYS ASN VAL PHE PRO PRO GLU VAL ALA VAL PHE GLU PRO SEQRES 11 D 244 SER GLU ALA GLU ILE SER HIS THR GLN LYS ALA THR LEU SEQRES 12 D 244 VAL CYS LEU ALA THR GLY PHE TYR PRO ASP HIS VAL GLU SEQRES 13 D 244 LEU SER TRP TRP VAL ASN GLY LYS GLU VAL HIS SER GLY SEQRES 14 D 244 VAL CYS THR ASP PRO GLN PRO LEU LYS GLU GLN PRO ALA SEQRES 15 D 244 LEU GLN ASP SER ARG TYR ALA LEU SER SER ARG LEU ARG SEQRES 16 D 244 VAL SER ALA THR PHE TRP GLN ASN PRO ARG ASN HIS PHE SEQRES 17 D 244 ARG CYS GLN VAL GLN PHE TYR GLY LEU SER GLU ASN ASP SEQRES 18 D 244 GLU TRP THR GLN ASP ARG ALA LYS PRO VAL THR GLN ILE SEQRES 19 D 244 VAL SER ALA GLU ALA TRP GLY ARG ALA ASP SEQRES 1 P 9 PHE LEU ALA GLU LEU ALA TYR ASP LEU HET GOL A 301 6 HET GOL A 302 6 HET NA A 303 1 HET NA A 304 1 HET NA A 305 1 HET NA A 306 1 HET GOL A 307 6 HET MES B 101 12 HET NA B 102 1 HET NA B 103 1 HET NAG C 301 14 HET NA C 302 1 HET GOL C 303 6 HET GOL C 304 6 HETNAM GOL GLYCEROL HETNAM NA SODIUM ION HETNAM MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 6 GOL 5(C3 H8 O3) FORMUL 8 NA 7(NA 1+) FORMUL 13 MES C6 H13 N O4 S FORMUL 16 NAG C8 H15 N O6 FORMUL 20 HOH *237(H2 O) HELIX 1 AA1 ALA A 50 GLU A 54 5 5 HELIX 2 AA2 GLY A 57 ASN A 87 1 31 HELIX 3 AA3 ASP A 138 HIS A 152 1 15 HELIX 4 AA4 HIS A 152 GLY A 163 1 12 HELIX 5 AA5 GLY A 163 GLY A 176 1 14 HELIX 6 AA6 GLY A 176 GLN A 181 1 6 HELIX 7 AA7 GLN A 254 GLN A 256 5 3 HELIX 8 AA8 HIS C 82 SER C 86 5 5 HELIX 9 AA9 SER D 131 THR D 138 1 8 SHEET 1 AA1 8 GLU A 47 PRO A 48 0 SHEET 2 AA1 8 THR A 32 ASP A 38 -1 N ARG A 36 O GLU A 47 SHEET 3 AA1 8 ARG A 22 VAL A 29 -1 N VAL A 29 O THR A 32 SHEET 4 AA1 8 HIS A 4 VAL A 13 -1 N ARG A 7 O TYR A 28 SHEET 5 AA1 8 THR A 95 VAL A 104 -1 O ARG A 98 N PHE A 10 SHEET 6 AA1 8 PHE A 110 TYR A 119 -1 O LEU A 111 N ASP A 103 SHEET 7 AA1 8 LYS A 122 LEU A 127 -1 O LEU A 127 N HIS A 115 SHEET 8 AA1 8 TRP A 134 ALA A 136 -1 O THR A 135 N ALA A 126 SHEET 1 AA2 4 LYS A 187 ALA A 194 0 SHEET 2 AA2 4 GLU A 199 PHE A 209 -1 O LEU A 207 N LYS A 187 SHEET 3 AA2 4 PHE A 242 PRO A 251 -1 O ALA A 246 N CYS A 204 SHEET 4 AA2 4 THR A 229 LEU A 231 -1 N GLU A 230 O ALA A 247 SHEET 1 AA3 4 LYS A 187 ALA A 194 0 SHEET 2 AA3 4 GLU A 199 PHE A 209 -1 O LEU A 207 N LYS A 187 SHEET 3 AA3 4 PHE A 242 PRO A 251 -1 O ALA A 246 N CYS A 204 SHEET 4 AA3 4 ARG A 235 PRO A 236 -1 N ARG A 235 O GLN A 243 SHEET 1 AA4 4 GLU A 223 ASP A 224 0 SHEET 2 AA4 4 THR A 215 ARG A 220 -1 N ARG A 220 O GLU A 223 SHEET 3 AA4 4 TYR A 258 GLN A 263 -1 O HIS A 261 N THR A 217 SHEET 4 AA4 4 LEU A 271 ARG A 274 -1 O LEU A 273 N CYS A 260 SHEET 1 AA5 4 LYS B 6 SER B 11 0 SHEET 2 AA5 4 ASN B 21 PHE B 30 -1 O ASN B 24 N TYR B 10 SHEET 3 AA5 4 PHE B 62 PHE B 70 -1 O TYR B 66 N CYS B 25 SHEET 4 AA5 4 GLU B 50 HIS B 51 -1 N GLU B 50 O TYR B 67 SHEET 1 AA6 4 LYS B 6 SER B 11 0 SHEET 2 AA6 4 ASN B 21 PHE B 30 -1 O ASN B 24 N TYR B 10 SHEET 3 AA6 4 PHE B 62 PHE B 70 -1 O TYR B 66 N CYS B 25 SHEET 4 AA6 4 SER B 55 PHE B 56 -1 N SER B 55 O TYR B 63 SHEET 1 AA7 4 GLU B 44 ARG B 45 0 SHEET 2 AA7 4 GLU B 36 LYS B 41 -1 N LYS B 41 O GLU B 44 SHEET 3 AA7 4 TYR B 78 ASN B 83 -1 O ARG B 81 N ASP B 38 SHEET 4 AA7 4 LYS B 91 LYS B 94 -1 O VAL B 93 N CYS B 80 SHEET 1 AA8 2 SER C 3 THR C 5 0 SHEET 2 AA8 2 LYS C 24 SER C 26 -1 O LYS C 24 N THR C 5 SHEET 1 AA9 5 ARG C 10 SER C 14 0 SHEET 2 AA9 5 THR C 106 PHE C 111 1 O SER C 109 N VAL C 11 SHEET 3 AA9 5 ALA C 87 SER C 94 -1 N ALA C 87 O VAL C 108 SHEET 4 AA9 5 LEU C 33 GLN C 38 -1 N TYR C 36 O PHE C 90 SHEET 5 AA9 5 GLN C 45 TYR C 50 -1 O LEU C 47 N TRP C 35 SHEET 1 AB1 4 ARG C 10 SER C 14 0 SHEET 2 AB1 4 THR C 106 PHE C 111 1 O SER C 109 N VAL C 11 SHEET 3 AB1 4 ALA C 87 SER C 94 -1 N ALA C 87 O VAL C 108 SHEET 4 AB1 4 LEU C 100 PHE C 102 -1 O THR C 101 N LEU C 93 SHEET 1 AB2 4 LEU C 19 LEU C 21 0 SHEET 2 AB2 4 SER C 73 LYS C 78 -1 O LEU C 76 N LEU C 21 SHEET 3 AB2 4 GLU C 64 SER C 68 -1 N GLU C 64 O ARG C 77 SHEET 4 AB2 4 VAL C 56 GLN C 58 -1 N VAL C 57 O ALA C 65 SHEET 1 AB3 4 ALA C 120 GLN C 123 0 SHEET 2 AB3 4 CYS C 135 PHE C 140 -1 O LEU C 136 N TYR C 122 SHEET 3 AB3 4 ASN C 172 TRP C 177 -1 O ALA C 174 N PHE C 137 SHEET 4 AB3 4 TYR C 155 ILE C 156 -1 N TYR C 155 O TRP C 177 SHEET 1 AB4 4 ALA C 120 GLN C 123 0 SHEET 2 AB4 4 CYS C 135 PHE C 140 -1 O LEU C 136 N TYR C 122 SHEET 3 AB4 4 ASN C 172 TRP C 177 -1 O ALA C 174 N PHE C 137 SHEET 4 AB4 4 CYS C 160 VAL C 161 -1 N CYS C 160 O SER C 173 SHEET 1 AB5 5 LEU D 4 ASN D 7 0 SHEET 2 AB5 5 ALA D 18 LEU D 25 -1 O ILE D 24 N GLU D 5 SHEET 3 AB5 5 GLU D 75 ALA D 81 -1 O LEU D 76 N CYS D 23 SHEET 4 AB5 5 ALA D 64 ARG D 70 -1 N LEU D 67 O GLN D 79 SHEET 5 AB5 5 LYS D 56 LEU D 61 -1 N LYS D 59 O TYR D 66 SHEET 1 AB6 5 TRP D 10 PRO D 14 0 SHEET 2 AB6 5 THR D 109 LEU D 114 1 O THR D 112 N VAL D 13 SHEET 3 AB6 5 ARG D 87 SER D 94 -1 N ARG D 87 O LEU D 111 SHEET 4 AB6 5 TRP D 32 GLN D 38 -1 N TYR D 36 O TYR D 90 SHEET 5 AB6 5 LEU D 44 LEU D 50 -1 O GLN D 45 N GLN D 37 SHEET 1 AB7 4 TRP D 10 PRO D 14 0 SHEET 2 AB7 4 THR D 109 LEU D 114 1 O THR D 112 N VAL D 13 SHEET 3 AB7 4 ARG D 87 SER D 94 -1 N ARG D 87 O LEU D 111 SHEET 4 AB7 4 PHE D 104 PHE D 105 -1 O PHE D 104 N CYS D 93 SHEET 1 AB8 2 THR D 97 GLY D 98 0 SHEET 2 AB8 2 LEU P 5 ALA P 6 -1 O ALA P 6 N THR D 97 SHEET 1 AB9 4 ALA D 126 PHE D 128 0 SHEET 2 AB9 4 ALA D 141 PHE D 150 -1 O VAL D 144 N PHE D 128 SHEET 3 AB9 4 TYR D 188 VAL D 196 -1 O LEU D 194 N LEU D 143 SHEET 4 AB9 4 VAL D 170 THR D 172 -1 N CYS D 171 O ARG D 193 SHEET 1 AC1 4 ALA D 126 PHE D 128 0 SHEET 2 AC1 4 ALA D 141 PHE D 150 -1 O VAL D 144 N PHE D 128 SHEET 3 AC1 4 TYR D 188 VAL D 196 -1 O LEU D 194 N LEU D 143 SHEET 4 AC1 4 LEU D 177 LYS D 178 -1 N LEU D 177 O ALA D 189 SHEET 1 AC2 3 VAL D 155 SER D 158 0 SHEET 2 AC2 3 GLN D 211 PHE D 214 -1 O GLN D 211 N SER D 158 SHEET 3 AC2 3 GLN D 233 SER D 236 -1 O GLN D 233 N PHE D 214 SSBOND 1 CYS A 102 CYS A 165 1555 1555 2.03 SSBOND 2 CYS A 204 CYS A 260 1555 1555 2.03 SSBOND 3 CYS B 25 CYS B 80 1555 1555 2.03 SSBOND 4 CYS C 23 CYS C 91 1555 1555 2.03 SSBOND 5 CYS C 160 CYS D 171 1555 1555 2.03 SSBOND 6 CYS D 23 CYS D 91 1555 1555 2.03 SSBOND 7 CYS D 145 CYS D 210 1555 1555 2.03 LINK ND2 ASN C 71 C1 NAG C 301 1555 1555 1.44 LINK O THR A 95 NA NA A 303 1555 1555 2.65 LINK OE1 GLN A 97 NA NA A 303 1555 1555 2.91 LINK O ALA A 118 NA NA A 303 1555 1555 3.10 LINK OG1 THR A 164 NA NA A 304 1555 1555 3.19 LINK O GLN A 219 NA NA A 305 1555 1555 3.12 LINK O GLY A 222 NA NA A 306 1555 1555 2.71 LINK O ARG A 257 NA NA A 305 1555 1555 3.09 LINK OG1 THR A 259 NA NA A 305 1555 1555 2.57 LINK NA NA A 304 O HOH A 466 1555 1555 2.87 LINK NA NA A 304 O HOH A 472 1555 1555 2.39 LINK NA NA A 304 O HOH A 497 1555 1555 2.57 LINK NA NA A 304 O HOH C 430 1555 1555 2.79 LINK NA NA A 305 O HOH A 479 1555 1555 2.85 LINK NA NA A 306 O HOH A 463 1555 1555 2.68 LINK NA NA A 306 O HOH C 428 1555 2556 3.03 LINK NA NA A 306 O HOH C 442 1555 2556 3.04 LINK O HOH A 427 NA NA B 102 1555 1555 2.98 LINK O HOH A 427 NA NA B 103 1555 1555 2.47 LINK OG SER B 57 NA NA B 102 1555 1555 3.02 LINK OD2 ASP B 59 NA NA B 103 1555 1555 2.79 LINK OG SER B 61 NA NA B 102 1555 1555 2.54 LINK O PHE B 62 NA NA B 102 1555 1555 3.16 LINK NA NA B 103 O HOH B 215 1555 1555 2.92 LINK NA NA B 103 O HOH B 236 1555 1555 2.70 LINK NA NA B 103 O HOH B 237 1555 1555 2.76 LINK O SER C 52 NA NA C 302 1555 1555 2.93 LINK NA NA C 302 O HOH C 420 1555 1555 3.11 LINK NA NA C 302 O HOH C 442 1555 1555 2.74 CISPEP 1 TYR A 210 PRO A 211 0 0.32 CISPEP 2 HIS B 31 PRO B 32 0 3.98 CISPEP 3 ASN D 7 PRO D 8 0 2.70 CISPEP 4 TYR D 151 PRO D 152 0 0.91 CRYST1 138.377 81.780 91.312 90.00 98.63 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007227 0.000000 0.001097 0.00000 SCALE2 0.000000 0.012228 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011077 0.00000 CONECT 760 5553 CONECT 778 5553 CONECT 820 1317 CONECT 959 5553 CONECT 1310 5554 CONECT 1317 820 CONECT 1623 2065 CONECT 1754 5555 CONECT 1782 5556 CONECT 2033 5555 CONECT 2058 5555 CONECT 2065 1623 CONECT 2395 2818 CONECT 2633 5575 CONECT 2646 5576 CONECT 2666 5575 CONECT 2670 5575 CONECT 2818 2395 CONECT 3127 3663 CONECT 3378 5591 CONECT 3519 5577 CONECT 3663 3127 CONECT 3982 5196 CONECT 4269 4779 CONECT 4779 4269 CONECT 5083 5354 CONECT 5196 3982 CONECT 5354 5083 CONECT 5541 5542 5543 CONECT 5542 5541 CONECT 5543 5541 5544 5545 CONECT 5544 5543 CONECT 5545 5543 5546 CONECT 5546 5545 CONECT 5547 5548 5549 CONECT 5548 5547 CONECT 5549 5547 5550 5551 CONECT 5550 5549 CONECT 5551 5549 5552 CONECT 5552 5551 CONECT 5553 760 778 959 CONECT 5554 1310 5669 5675 5700 CONECT 5554 5809 CONECT 5555 1754 2033 2058 5682 CONECT 5556 1782 5666 CONECT 5557 5558 5559 CONECT 5558 5557 CONECT 5559 5557 5560 5561 CONECT 5560 5559 CONECT 5561 5559 5562 CONECT 5562 5561 CONECT 5563 5564 5568 CONECT 5564 5563 5565 CONECT 5565 5564 5566 CONECT 5566 5565 5567 5569 CONECT 5567 5566 5568 CONECT 5568 5563 5567 CONECT 5569 5566 5570 CONECT 5570 5569 5571 CONECT 5571 5570 5572 5573 5574 CONECT 5572 5571 CONECT 5573 5571 CONECT 5574 5571 CONECT 5575 2633 2666 2670 5630 CONECT 5576 2646 5630 5752 5773 CONECT 5576 5774 CONECT 5577 3519 5578 5588 CONECT 5578 5577 5579 5585 CONECT 5579 5578 5580 5586 CONECT 5580 5579 5581 5587 CONECT 5581 5580 5582 5588 CONECT 5582 5581 5589 CONECT 5583 5584 5585 5590 CONECT 5584 5583 CONECT 5585 5578 5583 CONECT 5586 5579 CONECT 5587 5580 CONECT 5588 5577 5581 CONECT 5589 5582 CONECT 5590 5583 CONECT 5591 3378 5799 5821 CONECT 5592 5593 5594 CONECT 5593 5592 CONECT 5594 5592 5595 5596 CONECT 5595 5594 CONECT 5596 5594 5597 CONECT 5597 5596 CONECT 5598 5599 5600 CONECT 5599 5598 CONECT 5600 5598 5601 5602 CONECT 5601 5600 CONECT 5602 5600 5603 CONECT 5603 5602 CONECT 5630 5575 5576 CONECT 5666 5556 CONECT 5669 5554 CONECT 5675 5554 CONECT 5682 5555 CONECT 5700 5554 CONECT 5752 5576 CONECT 5773 5576 CONECT 5774 5576 CONECT 5799 5591 CONECT 5809 5554 CONECT 5821 5591 MASTER 608 0 14 9 82 0 0 6 5814 5 105 67 END