HEADER TRANSPORT PROTEIN 19-DEC-25 9TQB TITLE OCTAMERIC C. ELEGANS BORC, CONTAINING BORCS5, BORCS6, BORCS7, BORCS8, TITLE 2 KXD1 AND THE SHARED BORC AND BLOC-1 SUBUNITS, BLOC1S1, BLOC1S2 AND TITLE 3 SNAPIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: BIOGENESIS OF LYSOSOME-RELATED ORGANELLES COMPLEX 1 SUBUNIT COMPND 3 1; COMPND 4 CHAIN: G; COMPND 5 SYNONYM: BLOC-1 SUBUNIT 1; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: BIOGENESIS OF LYSOSOME-RELATED ORGANELLES COMPLEX 1 SUBUNIT COMPND 9 2; COMPND 10 CHAIN: H; COMPND 11 SYNONYM: BLOC-1 SUBUNIT 2; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: SNAPIN PROTEIN HOMOLOG; COMPND 15 CHAIN: F; COMPND 16 SYNONYM: BIOGENESIS OF LYSOSOME-RELATED ORGANELLES COMPLEX 1 SUBUNIT COMPND 17 7,BLOC-1 SUBUNIT 7; COMPND 18 ENGINEERED: YES; COMPND 19 OTHER_DETAILS: COMPND 20 MSSTAGGEVSINSGDLLLGTLSTSITKLEQQIRATQLSQKKLNSDCETMAEYLRDLSEYKQPVDLLPYV COMPND 21 GKLNDSTIRVNNTHQKLDDLLERLTKLQRQIARETYKKKNSIKEQEPPVQPEN; COMPND 22 MOL_ID: 4; COMPND 23 MOLECULE: KXDL DOMAIN-CONTAINING PROTEIN; COMPND 24 CHAIN: E; COMPND 25 ENGINEERED: YES; COMPND 26 MOL_ID: 5; COMPND 27 MOLECULE: BLOC-1-RELATED COMPLEX SUBUNIT 5; COMPND 28 CHAIN: A; COMPND 29 ENGINEERED: YES; COMPND 30 MOL_ID: 6; COMPND 31 MOLECULE: BLOC-1-RELATED COMPLEX SUBUNIT 6 C-TERMINAL HELIX DOMAIN- COMPND 32 CONTAINING PROTEIN; COMPND 33 CHAIN: B; COMPND 34 ENGINEERED: YES; COMPND 35 OTHER_DETAILS: COMPND 36 MSTSTESPDTPTTSQPLLSNKQTSFVVDDLEERIRESARISSPKRAAAAGLPDPKILVDLETHTKEIVN COMPND 37 NMDTMLRDMRGSLHGMSDLTLESLQCYNSGVEKACDEADANVKSTYAMLAKVEEVNQSMGNVQKLAGQI COMPND 38 KEMRRLVELFETLFHGSLKENLYFQ; COMPND 39 MOL_ID: 7; COMPND 40 MOLECULE: BLOC-1-RELATED COMPLEX SUBUNIT 7; COMPND 41 CHAIN: C; COMPND 42 ENGINEERED: YES; COMPND 43 MOL_ID: 8; COMPND 44 MOLECULE: BLOC-1-RELATED COMPLEX SUBUNIT 8 HOMOLOG; COMPND 45 CHAIN: D; COMPND 46 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAENORHABDITIS ELEGANS; SOURCE 3 ORGANISM_TAXID: 6239; SOURCE 4 GENE: BLOS-1, T20G5.10; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: CAENORHABDITIS ELEGANS; SOURCE 9 ORGANISM_TAXID: 6239; SOURCE 10 GENE: BLOS-2, Y73B6BL.30; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 13 MOL_ID: 3; SOURCE 14 ORGANISM_SCIENTIFIC: CAENORHABDITIS ELEGANS; SOURCE 15 ORGANISM_TAXID: 6239; SOURCE 16 GENE: SNPN-1, C02B10.2; SOURCE 17 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 18 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 19 MOL_ID: 4; SOURCE 20 ORGANISM_SCIENTIFIC: CAENORHABDITIS; SOURCE 21 ORGANISM_TAXID: 6237; SOURCE 22 GENE: KXD-1, C13F10.2, CELE_C13F10.2; SOURCE 23 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 24 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 25 MOL_ID: 5; SOURCE 26 ORGANISM_SCIENTIFIC: CAENORHABDITIS ELEGANS; SOURCE 27 ORGANISM_TAXID: 6239; SOURCE 28 GENE: SAM-4, CELE_F59E12.11, F59E12.11; SOURCE 29 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 30 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 31 MOL_ID: 6; SOURCE 32 ORGANISM_SCIENTIFIC: CAENORHABDITIS ELEGANS; SOURCE 33 ORGANISM_TAXID: 6239; SOURCE 34 GENE: BLOS-7, CELE_Y37E11B.3, Y37E11B.3; SOURCE 35 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 36 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 37 MOL_ID: 7; SOURCE 38 ORGANISM_SCIENTIFIC: CAENORHABDITIS ELEGANS; SOURCE 39 ORGANISM_TAXID: 6239; SOURCE 40 GENE: BLOS-8, CELE_R03A10.1, R03A10.1; SOURCE 41 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 42 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 43 MOL_ID: 8; SOURCE 44 ORGANISM_SCIENTIFIC: CAENORHABDITIS ELEGANS; SOURCE 45 ORGANISM_TAXID: 6239; SOURCE 46 GENE: BLOS-9, K11B4.2; SOURCE 47 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 48 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BORC, BLOC-1, LYSOSOME, RECYCLING ENDOSOME, EARP, TRANSPORT PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR S.J.AMANN,M.E.G.DE ARAUJO,I.GRISHKOVSKAYA,L.A.HUBER,D.HASELBACH REVDAT 1 21-JAN-26 9TQB 0 JRNL AUTH M.E.G.DE ARAUJO,S.J.AMANN,T.STASYK,A.SCHLEIFFER,E.RAUCH, JRNL AUTH 2 P.FLUEMANN,I.SINGER,L.KREMSER,V.DOSTAL,T.LAOPANUPONG, JRNL AUTH 3 N.OBOJES,M.H.WALLNOEFER,F.S.GRADL,R.KURZBAUER,C.KREBIEHL, JRNL AUTH 4 S.KOFLER,I.GRISHKOVSKAYA,G.F.VOGEL,M.W.HESS,B.SARG, JRNL AUTH 5 T.CLAUSEN,D.HASELBACH,L.A.HUBER JRNL TITL BORC ASSEMBLIES INTEGRATE BLOC-1 SUBUNITS TO DIVERSIFY JRNL TITL 2 ENDOSOMAL TRAFFICKING FUNCTIONS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 7.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CRYOSPARC, CRYOSPARC, PHENIX REMARK 3 RECONSTRUCTION SCHEMA : FOURIER SPACE REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : FLEXIBLE FIT REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 7.800 REMARK 3 NUMBER OF PARTICLES : 201956 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9TQB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-DEC-25. REMARK 100 THE DEPOSITION ID IS D_1292153145. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : BORC REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 (6K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 3000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, H, F, E, A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET G 1 REMARK 465 LEU G 2 REMARK 465 LYS G 3 REMARK 465 GLU G 4 REMARK 465 HIS G 5 REMARK 465 SER G 6 REMARK 465 LEU G 108 REMARK 465 ARG G 109 REMARK 465 ARG G 110 REMARK 465 ALA G 111 REMARK 465 TYR G 112 REMARK 465 GLU G 113 REMARK 465 ALA G 114 REMARK 465 LYS G 115 REMARK 465 ASN G 116 REMARK 465 PRO G 117 REMARK 465 PRO G 118 REMARK 465 LEU G 119 REMARK 465 PRO G 120 REMARK 465 PRO G 121 REMARK 465 ASN G 122 REMARK 465 GLN G 123 REMARK 465 ALA G 124 REMARK 465 ASN G 125 REMARK 465 PRO G 126 REMARK 465 ALA G 127 REMARK 465 SER G 128 REMARK 465 HIS G 129 REMARK 465 MET H 1 REMARK 465 ALA H 2 REMARK 465 GLU H 3 REMARK 465 ILE H 4 REMARK 465 ASN H 5 REMARK 465 GLU H 6 REMARK 465 ARG H 7 REMARK 465 ALA H 8 REMARK 465 SER H 9 REMARK 465 THR H 10 REMARK 465 SER H 11 REMARK 465 SER H 12 REMARK 465 PRO H 13 REMARK 465 GLN H 130 REMARK 465 SER H 131 REMARK 465 GLN H 132 REMARK 465 SER F 57 REMARK 465 GLU F 58 REMARK 465 TYR F 59 REMARK 465 LYS F 60 REMARK 465 GLN F 61 REMARK 465 PRO F 62 REMARK 465 VAL F 63 REMARK 465 ASP F 64 REMARK 465 LEU F 65 REMARK 465 LEU F 66 REMARK 465 PRO F 67 REMARK 465 TYR F 68 REMARK 465 VAL F 69 REMARK 465 GLY F 70 REMARK 465 LYS F 71 REMARK 465 LEU F 72 REMARK 465 ASN F 73 REMARK 465 ASP F 74 REMARK 465 SER F 75 REMARK 465 THR F 76 REMARK 465 ILE F 77 REMARK 465 ARG F 78 REMARK 465 VAL F 79 REMARK 465 ASN F 80 REMARK 465 ASN F 81 REMARK 465 THR F 82 REMARK 465 HIS F 83 REMARK 465 GLN F 84 REMARK 465 LYS F 85 REMARK 465 LEU F 86 REMARK 465 ASP F 87 REMARK 465 ASP F 88 REMARK 465 LEU F 89 REMARK 465 LEU F 90 REMARK 465 GLU F 91 REMARK 465 ARG F 92 REMARK 465 LEU F 93 REMARK 465 THR F 94 REMARK 465 LYS F 95 REMARK 465 LEU F 96 REMARK 465 GLN F 97 REMARK 465 ARG F 98 REMARK 465 GLN F 99 REMARK 465 ILE F 100 REMARK 465 ALA F 101 REMARK 465 ARG F 102 REMARK 465 GLU F 103 REMARK 465 THR F 104 REMARK 465 TYR F 105 REMARK 465 LYS F 106 REMARK 465 LYS F 107 REMARK 465 LYS F 108 REMARK 465 ASN F 109 REMARK 465 SER F 110 REMARK 465 ILE F 111 REMARK 465 LYS F 112 REMARK 465 GLU F 113 REMARK 465 GLN F 114 REMARK 465 GLU F 115 REMARK 465 PRO F 116 REMARK 465 PRO F 117 REMARK 465 VAL F 118 REMARK 465 GLN F 119 REMARK 465 PRO F 120 REMARK 465 GLU F 121 REMARK 465 ASN F 122 REMARK 465 MET E 1 REMARK 465 ALA E 2 REMARK 465 GLU E 3 REMARK 465 LYS E 4 REMARK 465 ASN E 5 REMARK 465 HIS E 6 REMARK 465 GLN E 7 REMARK 465 GLN E 8 REMARK 465 GLN E 9 REMARK 465 GLU E 10 REMARK 465 ARG E 11 REMARK 465 LEU E 12 REMARK 465 PRO E 13 REMARK 465 GLY E 14 REMARK 465 ASN E 15 REMARK 465 PRO E 16 REMARK 465 PHE E 17 REMARK 465 PHE E 18 REMARK 465 PRO E 19 REMARK 465 SER E 20 REMARK 465 ARG E 21 REMARK 465 SER E 22 REMARK 465 ASN E 23 REMARK 465 ALA E 24 REMARK 465 GLY E 25 REMARK 465 SER E 26 REMARK 465 SER E 27 REMARK 465 PHE E 28 REMARK 465 ASP E 29 REMARK 465 MET E 30 REMARK 465 PRO E 31 REMARK 465 ILE E 81 REMARK 465 GLU E 82 REMARK 465 LYS E 83 REMARK 465 ALA E 84 REMARK 465 LYS E 85 REMARK 465 ARG E 86 REMARK 465 ASP E 87 REMARK 465 SER E 88 REMARK 465 VAL E 89 REMARK 465 GLY E 90 REMARK 465 HIS E 91 REMARK 465 LYS E 92 REMARK 465 GLU E 93 REMARK 465 THR E 94 REMARK 465 ILE E 95 REMARK 465 LEU E 96 REMARK 465 GLN E 97 REMARK 465 MET E 98 REMARK 465 LYS E 99 REMARK 465 THR E 100 REMARK 465 ASP E 101 REMARK 465 LEU E 102 REMARK 465 GLU E 103 REMARK 465 PHE E 104 REMARK 465 ILE E 105 REMARK 465 PHE E 106 REMARK 465 LYS E 107 REMARK 465 LYS E 108 REMARK 465 ILE E 109 REMARK 465 ARG E 110 REMARK 465 MET E 111 REMARK 465 PHE E 112 REMARK 465 LYS E 113 REMARK 465 THR E 114 REMARK 465 VAL E 115 REMARK 465 LEU E 116 REMARK 465 SER E 117 REMARK 465 SER E 118 REMARK 465 LYS E 119 REMARK 465 TYR E 120 REMARK 465 PRO E 121 REMARK 465 GLU E 122 REMARK 465 VAL E 123 REMARK 465 TYR E 124 REMARK 465 ALA E 125 REMARK 465 GLU E 126 REMARK 465 VAL E 127 REMARK 465 SER E 128 REMARK 465 ALA E 129 REMARK 465 GLU E 130 REMARK 465 LEU E 131 REMARK 465 THR E 132 REMARK 465 PRO E 133 REMARK 465 LYS E 134 REMARK 465 ARG E 135 REMARK 465 SER E 136 REMARK 465 GLU E 137 REMARK 465 GLU E 138 REMARK 465 ASP E 139 REMARK 465 GLU E 140 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ASN A 3 REMARK 465 GLU A 4 REMARK 465 GLN A 5 REMARK 465 SER A 6 REMARK 465 SER A 7 REMARK 465 SER A 8 REMARK 465 THR A 9 REMARK 465 ALA A 10 REMARK 465 GLY A 11 REMARK 465 THR A 12 REMARK 465 SER A 13 REMARK 465 SER A 14 REMARK 465 ASN A 15 REMARK 465 PRO A 16 REMARK 465 GLN A 17 REMARK 465 ASN A 18 REMARK 465 GLN A 19 REMARK 465 GLN A 20 REMARK 465 SER A 21 REMARK 465 SER A 22 REMARK 465 PHE A 23 REMARK 465 SER A 24 REMARK 465 PHE A 25 REMARK 465 LEU A 26 REMARK 465 THR A 27 REMARK 465 ARG A 28 REMARK 465 ALA A 29 REMARK 465 SER A 30 REMARK 465 THR A 31 REMARK 465 LYS A 32 REMARK 465 ARG A 33 REMARK 465 SER A 34 REMARK 465 LYS A 35 REMARK 465 GLY A 36 REMARK 465 ILE A 37 REMARK 465 ILE A 38 REMARK 465 THR A 39 REMARK 465 VAL A 40 REMARK 465 LYS A 41 REMARK 465 ASP A 42 REMARK 465 GLY A 43 REMARK 465 ASN A 44 REMARK 465 ILE A 45 REMARK 465 PRO A 46 REMARK 465 GLN A 47 REMARK 465 GLU A 48 REMARK 465 LYS A 49 REMARK 465 LEU A 50 REMARK 465 GLU A 51 REMARK 465 ASP A 52 REMARK 465 ASP A 53 REMARK 465 GLU A 54 REMARK 465 ILE A 55 REMARK 465 TYR A 56 REMARK 465 LYS A 57 REMARK 465 ARG A 58 REMARK 465 PHE A 59 REMARK 465 THR A 60 REMARK 465 GLU A 61 REMARK 465 ILE A 62 REMARK 465 PRO A 63 REMARK 465 ARG A 64 REMARK 465 PHE A 65 REMARK 465 LEU A 66 REMARK 465 PRO A 67 REMARK 465 VAL A 68 REMARK 465 LEU A 193 REMARK 465 ASN A 194 REMARK 465 LEU A 195 REMARK 465 GLY A 196 REMARK 465 SER A 197 REMARK 465 VAL A 198 REMARK 465 LEU A 199 REMARK 465 ASP A 200 REMARK 465 ARG A 201 REMARK 465 SER A 202 REMARK 465 PRO A 203 REMARK 465 VAL A 204 REMARK 465 PRO A 205 REMARK 465 SER A 206 REMARK 465 SER A 207 REMARK 465 ASP A 208 REMARK 465 SER A 209 REMARK 465 SER A 210 REMARK 465 LEU A 211 REMARK 465 GLN A 212 REMARK 465 SER A 213 REMARK 465 THR A 214 REMARK 465 PRO A 215 REMARK 465 ARG A 216 REMARK 465 HIS A 217 REMARK 465 ASN A 218 REMARK 465 GLN A 219 REMARK 465 ASN A 220 REMARK 465 ILE A 221 REMARK 465 GLY A 222 REMARK 465 HIS A 223 REMARK 465 ILE A 224 REMARK 465 ASP A 225 REMARK 465 GLN A 226 REMARK 465 ILE A 227 REMARK 465 GLU A 228 REMARK 465 PRO A 229 REMARK 465 ILE A 230 REMARK 465 GLU A 231 REMARK 465 GLU A 232 REMARK 465 ILE A 233 REMARK 465 ARG A 234 REMARK 465 VAL A 235 REMARK 465 VAL A 236 REMARK 465 ASP A 237 REMARK 465 LEU A 238 REMARK 465 PRO A 239 REMARK 465 LYS A 240 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 THR B 3 REMARK 465 SER B 4 REMARK 465 THR B 5 REMARK 465 GLU B 6 REMARK 465 SER B 7 REMARK 465 PRO B 8 REMARK 465 ASP B 9 REMARK 465 THR B 10 REMARK 465 PRO B 11 REMARK 465 THR B 12 REMARK 465 THR B 13 REMARK 465 SER B 14 REMARK 465 GLN B 15 REMARK 465 PRO B 16 REMARK 465 LEU B 17 REMARK 465 LEU B 18 REMARK 465 SER B 19 REMARK 465 ASN B 20 REMARK 465 LYS B 21 REMARK 465 GLN B 22 REMARK 465 THR B 23 REMARK 465 SER B 24 REMARK 465 PHE B 25 REMARK 465 VAL B 26 REMARK 465 VAL B 27 REMARK 465 ASP B 28 REMARK 465 ASP B 29 REMARK 465 LEU B 30 REMARK 465 GLU B 31 REMARK 465 GLU B 32 REMARK 465 ARG B 33 REMARK 465 ILE B 34 REMARK 465 ARG B 35 REMARK 465 GLU B 36 REMARK 465 SER B 37 REMARK 465 ALA B 38 REMARK 465 ARG B 39 REMARK 465 ILE B 40 REMARK 465 SER B 41 REMARK 465 SER B 42 REMARK 465 PRO B 43 REMARK 465 LYS B 44 REMARK 465 ARG B 45 REMARK 465 ALA B 46 REMARK 465 ALA B 47 REMARK 465 ALA B 48 REMARK 465 ALA B 49 REMARK 465 GLY B 50 REMARK 465 LEU B 51 REMARK 465 PRO B 52 REMARK 465 ASP B 53 REMARK 465 GLU B 146 REMARK 465 LEU B 147 REMARK 465 PHE B 148 REMARK 465 GLU B 149 REMARK 465 THR B 150 REMARK 465 LEU B 151 REMARK 465 PHE B 152 REMARK 465 HIS B 153 REMARK 465 GLY B 154 REMARK 465 SER B 155 REMARK 465 LEU B 156 REMARK 465 LYS B 157 REMARK 465 GLU B 158 REMARK 465 ASN B 159 REMARK 465 LEU B 160 REMARK 465 TYR B 161 REMARK 465 PHE B 162 REMARK 465 GLN B 163 REMARK 465 PHE C 107 REMARK 465 SER C 108 REMARK 465 ALA C 109 REMARK 465 ASP C 110 REMARK 465 SER C 111 REMARK 465 PHE C 112 REMARK 465 SER C 113 REMARK 465 SER C 114 REMARK 465 SER C 115 REMARK 465 VAL C 116 REMARK 465 ALA C 117 REMARK 465 GLY C 118 REMARK 465 GLU C 119 REMARK 465 ARG C 120 REMARK 465 PRO C 121 REMARK 465 ASN C 122 REMARK 465 PRO C 123 REMARK 465 PRO C 124 REMARK 465 ASN C 125 REMARK 465 ASN C 126 REMARK 465 MET D 1 REMARK 465 PRO D 2 REMARK 465 GLN D 108 REMARK 465 LEU D 109 REMARK 465 ASP D 110 REMARK 465 PHE D 111 REMARK 465 ASP D 112 REMARK 465 SER D 113 REMARK 465 THR D 114 REMARK 465 ARG D 115 REMARK 465 LYS D 116 REMARK 465 ALA D 117 REMARK 465 THR D 118 REMARK 465 SER D 119 REMARK 465 SER D 120 REMARK 465 ALA D 121 REMARK 465 GLU D 122 REMARK 465 SER D 123 REMARK 465 SER D 124 REMARK 465 THR D 125 REMARK 465 VAL D 126 REMARK 465 LYS D 127 REMARK 465 GLY D 128 REMARK 465 ARG D 129 REMARK 465 SER D 130 REMARK 465 LYS D 131 REMARK 465 SER D 132 REMARK 465 LEU D 133 REMARK 465 HIS D 134 REMARK 465 ASN D 135 REMARK 465 VAL D 136 REMARK 465 ALA D 137 REMARK 465 THR D 138 REMARK 465 ARG D 139 REMARK 465 VAL D 140 REMARK 465 HIS D 141 REMARK 465 SER D 142 REMARK 465 THR D 143 REMARK 465 GLU D 144 REMARK 465 ALA D 145 REMARK 465 SER D 146 REMARK 465 THR D 147 REMARK 465 SER D 148 REMARK 465 ASN D 149 REMARK 465 ASP D 150 REMARK 465 ALA D 151 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLY H 46 H GLU H 50 1.50 REMARK 500 O VAL A 114 H GLN A 118 1.54 REMARK 500 OD2 ASP E 45 HG1 THR E 48 1.56 REMARK 500 O SER E 39 HH21 ARG B 79 1.56 REMARK 500 OG SER D 6 HH21 ARG D 10 1.57 REMARK 500 HE22 GLN E 43 O LEU B 75 1.59 REMARK 500 O LYS B 55 H ASP B 59 1.60 REMARK 500 O LEU F 18 OG SER F 22 1.91 REMARK 500 O LEU G 74 OG1 THR G 77 1.97 REMARK 500 O GLN H 119 OG SER H 122 1.99 REMARK 500 O LEU D 79 OG1 THR D 82 2.00 REMARK 500 O SER F 22 OG1 THR F 26 2.02 REMARK 500 O GLN D 86 OG1 THR D 89 2.05 REMARK 500 O GLU G 60 OG SER G 63 2.06 REMARK 500 OD2 ASP E 45 OG1 THR E 48 2.08 REMARK 500 O THR D 81 OG SER D 84 2.08 REMARK 500 O ASN D 77 OG SER D 80 2.13 REMARK 500 O THR D 62 OG SER D 65 2.14 REMARK 500 O THR E 55 ND2 ASN B 97 2.15 REMARK 500 O TYR D 41 OE1 GLU D 45 2.17 REMARK 500 O GLU A 138 ND1 HIS A 142 2.19 REMARK 500 OH TYR B 96 O THR D 47 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL H 15 56.37 38.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ARG C 96 GLN C 97 -148.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-56129 RELATED DB: EMDB REMARK 900 C. ELEGANS BORC DBREF 9TQB G 1 129 UNP Q22616 BL1S1_CAEEL 1 129 DBREF 9TQB H 1 132 UNP Q95XD3 BL1S2_CAEEL 1 132 DBREF 9TQB F 1 122 UNP O44445 SNAPN_CAEEL 1 122 DBREF 9TQB E 1 140 UNP O01488 O01488_CAEEL 1 140 DBREF 9TQB A 1 240 UNP O01902 O01902_CAEEL 1 240 DBREF 9TQB B 1 157 UNP Q9TYN4 Q9TYN4_CAEEL 1 157 DBREF 9TQB C 1 126 UNP Q21655 Q21655_CAEEL 1 126 DBREF 9TQB D 1 151 UNP O45685 BORC8_CAEEL 1 151 SEQADV 9TQB ALA A 2 UNP O01902 GLY 2 ENGINEERED MUTATION SEQADV 9TQB GLU A 161 UNP O01902 ASP 161 ENGINEERED MUTATION SEQADV 9TQB GLU B 158 UNP Q9TYN4 EXPRESSION TAG SEQADV 9TQB ASN B 159 UNP Q9TYN4 EXPRESSION TAG SEQADV 9TQB LEU B 160 UNP Q9TYN4 EXPRESSION TAG SEQADV 9TQB TYR B 161 UNP Q9TYN4 EXPRESSION TAG SEQADV 9TQB PHE B 162 UNP Q9TYN4 EXPRESSION TAG SEQADV 9TQB GLN B 163 UNP Q9TYN4 EXPRESSION TAG SEQRES 1 G 129 MET LEU LYS GLU HIS SER LYS LYS GLN HIS LEU ARG ARG SEQRES 2 G 129 GLU VAL GLN GLU LYS LEU LYS ASN GLU ALA ILE VAL ALA SEQRES 3 G 129 ALA GLN THR LEU SER THR ALA VAL VAL ASP HIS LEU ASN SEQRES 4 G 129 ALA LYS VAL ALA GLN ALA TYR GLY ASN GLN LYS ARG LEU SEQRES 5 G 129 ASP VAL GLU ALA LYS ARG PHE GLU ASN ASN SER ALA ALA SEQRES 6 G 129 LEU ALA LYS GLN THR GLU GLN TRP LEU PHE ILE THR GLU SEQRES 7 G 129 GLY LEU ASN TYR ALA LEU LYS GLU ILE GLY ASP VAL GLU SEQRES 8 G 129 ASN TRP SER LYS THR ILE GLU ASN ASP MET LYS ILE ILE SEQRES 9 G 129 THR GLU THR LEU ARG ARG ALA TYR GLU ALA LYS ASN PRO SEQRES 10 G 129 PRO LEU PRO PRO ASN GLN ALA ASN PRO ALA SER HIS SEQRES 1 H 132 MET ALA GLU ILE ASN GLU ARG ALA SER THR SER SER PRO SEQRES 2 H 132 PRO VAL PRO SER THR PRO ALA PRO VAL PRO HIS ILE ARG SEQRES 3 H 132 GLN LEU ALA ASP ASN MET THR ASP LYS VAL GLY GLN PHE SEQRES 4 H 132 PHE GLN HIS GLN LEU GLU GLY SER ILE GLU GLU TYR LYS SEQRES 5 H 132 LEU LEU GLU THR MET ASN ASN THR THR ALA GLN ARG TYR SEQRES 6 H 132 VAL ASP MET LYS VAL VAL ALA GLU LYS VAL ALA GLY LYS SEQRES 7 H 132 LEU ASP ASN LEU ASN GLN LYS TYR GLU ASN LEU ARG PRO SEQRES 8 H 132 TYR LEU SER GLN ILE ASP ALA MET ASP GLU SER THR ARG SEQRES 9 H 132 ARG LEU GLU GLU ALA THR ALA VAL LEU GLU ASN TYR VAL SEQRES 10 H 132 THR GLN LEU GLU SER LYS LEU THR ASN ILE GLN GLN GLN SEQRES 11 H 132 SER GLN SEQRES 1 F 122 MET SER SER THR ALA GLY GLY GLU VAL SER ILE ASN SER SEQRES 2 F 122 GLY ASP LEU LEU LEU GLY THR LEU SER THR SER ILE THR SEQRES 3 F 122 LYS LEU GLU GLN GLN ILE ARG ALA THR GLN LEU SER GLN SEQRES 4 F 122 LYS LYS LEU ASN SER ASP CYS GLU THR MET ALA GLU TYR SEQRES 5 F 122 LEU ARG ASP LEU SER GLU TYR LYS GLN PRO VAL ASP LEU SEQRES 6 F 122 LEU PRO TYR VAL GLY LYS LEU ASN ASP SER THR ILE ARG SEQRES 7 F 122 VAL ASN ASN THR HIS GLN LYS LEU ASP ASP LEU LEU GLU SEQRES 8 F 122 ARG LEU THR LYS LEU GLN ARG GLN ILE ALA ARG GLU THR SEQRES 9 F 122 TYR LYS LYS LYS ASN SER ILE LYS GLU GLN GLU PRO PRO SEQRES 10 F 122 VAL GLN PRO GLU ASN SEQRES 1 E 140 MET ALA GLU LYS ASN HIS GLN GLN GLN GLU ARG LEU PRO SEQRES 2 E 140 GLY ASN PRO PHE PHE PRO SER ARG SER ASN ALA GLY SER SEQRES 3 E 140 SER PHE ASP MET PRO GLU THR PRO HIS LEU ILE ASP SER SEQRES 4 E 140 LEU THR SER GLN ILE ASP GLU PHE THR ILE GLN SER ILE SEQRES 5 E 140 ILE ASP THR GLN ARG GLN SER LEU LYS ARG PHE GLU LYS SEQRES 6 E 140 THR ASN GLU MET LEU MET ASN CYS ALA GLN LEU GLY ASP SEQRES 7 E 140 ARG ARG ILE GLU LYS ALA LYS ARG ASP SER VAL GLY HIS SEQRES 8 E 140 LYS GLU THR ILE LEU GLN MET LYS THR ASP LEU GLU PHE SEQRES 9 E 140 ILE PHE LYS LYS ILE ARG MET PHE LYS THR VAL LEU SER SEQRES 10 E 140 SER LYS TYR PRO GLU VAL TYR ALA GLU VAL SER ALA GLU SEQRES 11 E 140 LEU THR PRO LYS ARG SER GLU GLU ASP GLU SEQRES 1 A 240 MET ALA ASN GLU GLN SER SER SER THR ALA GLY THR SER SEQRES 2 A 240 SER ASN PRO GLN ASN GLN GLN SER SER PHE SER PHE LEU SEQRES 3 A 240 THR ARG ALA SER THR LYS ARG SER LYS GLY ILE ILE THR SEQRES 4 A 240 VAL LYS ASP GLY ASN ILE PRO GLN GLU LYS LEU GLU ASP SEQRES 5 A 240 ASP GLU ILE TYR LYS ARG PHE THR GLU ILE PRO ARG PHE SEQRES 6 A 240 LEU PRO VAL ILE PRO ALA VAL ILE GLY LYS ARG ASP PRO SEQRES 7 A 240 GLN THR ASN GLN GLY ALA SER TYR THR HIS GLN LYS ILE SEQRES 8 A 240 SER SER ARG PRO PHE PHE ARG LEU ALA THR ARG LEU GLN SEQRES 9 A 240 GLU HIS PHE ALA VAL ASN ALA LYS ALA VAL ALA ALA ASP SEQRES 10 A 240 GLN ALA LYS ILE PRO ALA THR CYS LYS SER VAL GLU ALA SEQRES 11 A 240 LYS MET ILE ARG LEU ILE GLU GLU THR ARG ALA HIS LYS SEQRES 12 A 240 GLU GLN HIS ASP GLY PHE MET ALA ALA LEU SER GLY LEU SEQRES 13 A 240 ASN GLN LEU HIS GLU ASP ILE CYS SER ILE GLN ILE ILE SEQRES 14 A 240 LEU GLU ASP ILE VAL PRO MET VAL GLU THR LEU ASN GLU SEQRES 15 A 240 ILE LEU THR PRO ASP GLU ARG LEU PRO PRO LEU ASN LEU SEQRES 16 A 240 GLY SER VAL LEU ASP ARG SER PRO VAL PRO SER SER ASP SEQRES 17 A 240 SER SER LEU GLN SER THR PRO ARG HIS ASN GLN ASN ILE SEQRES 18 A 240 GLY HIS ILE ASP GLN ILE GLU PRO ILE GLU GLU ILE ARG SEQRES 19 A 240 VAL VAL ASP LEU PRO LYS SEQRES 1 B 163 MET SER THR SER THR GLU SER PRO ASP THR PRO THR THR SEQRES 2 B 163 SER GLN PRO LEU LEU SER ASN LYS GLN THR SER PHE VAL SEQRES 3 B 163 VAL ASP ASP LEU GLU GLU ARG ILE ARG GLU SER ALA ARG SEQRES 4 B 163 ILE SER SER PRO LYS ARG ALA ALA ALA ALA GLY LEU PRO SEQRES 5 B 163 ASP PRO LYS ILE LEU VAL ASP LEU GLU THR HIS THR LYS SEQRES 6 B 163 GLU ILE VAL ASN ASN MET ASP THR MET LEU ARG ASP MET SEQRES 7 B 163 ARG GLY SER LEU HIS GLY MET SER ASP LEU THR LEU GLU SEQRES 8 B 163 SER LEU GLN CYS TYR ASN SER GLY VAL GLU LYS ALA CYS SEQRES 9 B 163 ASP GLU ALA ASP ALA ASN VAL LYS SER THR TYR ALA MET SEQRES 10 B 163 LEU ALA LYS VAL GLU GLU VAL ASN GLN SER MET GLY ASN SEQRES 11 B 163 VAL GLN LYS LEU ALA GLY GLN ILE LYS GLU MET ARG ARG SEQRES 12 B 163 LEU VAL GLU LEU PHE GLU THR LEU PHE HIS GLY SER LEU SEQRES 13 B 163 LYS GLU ASN LEU TYR PHE GLN SEQRES 1 C 126 MET SER ILE SER LEU GLU SER LYS THR LYS LEU PRO GLN SEQRES 2 C 126 LYS ILE LEU GLU ILE ILE THR ASP GLY SER ALA LEU LEU SEQRES 3 C 126 SER ILE PRO MET SER SER SER GLN ALA SER GLU THR LEU SEQRES 4 C 126 LEU THR SER ALA LYS GLN PHE SER HIS VAL GLU GLN VAL SEQRES 5 C 126 ILE ASP ASN THR ASP LYS LEU LEU ARG GLU ILE GLU GLN SEQRES 6 C 126 MET VAL ASP GLY VAL THR LYS ASN ALA GLU ASP MET GLU SEQRES 7 C 126 LYS GLY LEU ASP ILE VAL CYS ASP VAL GLN GLU CYS LEU SEQRES 8 C 126 GLN LYS VAL GLU ARG GLN ASN TYR TYR SER ALA VAL PRO SEQRES 9 C 126 LYS SER PHE SER ALA ASP SER PHE SER SER SER VAL ALA SEQRES 10 C 126 GLY GLU ARG PRO ASN PRO PRO ASN ASN SEQRES 1 D 151 MET PRO ASP PRO SER SER THR PRO ASN ARG THR ARG GLU SEQRES 2 D 151 ILE GLU SER ARG SER ARG ILE ILE SER GLU ARG ILE CYS SEQRES 3 D 151 GLU SER VAL ARG LEU LEU ASP ASN GLU PRO SER LEU ALA SEQRES 4 D 151 LEU TYR ARG LEU GLN GLU HIS THR VAL ARG SER LEU PRO SEQRES 5 D 151 GLY LEU VAL ASN ARG ARG ILE MET LEU THR GLN GLN SER SEQRES 6 D 151 ALA THR LEU SER GLY ALA GLN PHE ASP LEU GLU ASN THR SEQRES 7 D 151 LEU SER THR THR THR SER MET GLN ASN ALA THR SER ALA SEQRES 8 D 151 PHE ASP ASN CYS ILE GLU LEU LEU ARG ASN CYS MET PHE SEQRES 9 D 151 TYR LYS GLN GLN LEU ASP PHE ASP SER THR ARG LYS ALA SEQRES 10 D 151 THR SER SER ALA GLU SER SER THR VAL LYS GLY ARG SER SEQRES 11 D 151 LYS SER LEU HIS ASN VAL ALA THR ARG VAL HIS SER THR SEQRES 12 D 151 GLU ALA SER THR SER ASN ASP ALA HELIX 1 AA1 LYS G 7 GLY G 88 1 82 HELIX 2 AA2 VAL G 90 THR G 107 1 18 HELIX 3 AA3 ALA H 20 GLN H 129 1 110 HELIX 4 AA4 ASN F 12 LEU F 56 1 45 HELIX 5 AA5 HIS E 35 GLN E 43 1 9 HELIX 6 AA6 ASP E 45 ARG E 80 1 36 HELIX 7 AA7 PRO A 70 GLY A 74 1 5 HELIX 8 AA8 ASP A 77 GLN A 82 1 6 HELIX 9 AA9 SER A 93 ILE A 183 1 91 HELIX 10 AB1 THR A 185 LEU A 190 1 6 HELIX 11 AB2 LYS B 55 VAL B 145 1 91 HELIX 12 AB3 SER C 2 GLN C 34 1 33 HELIX 13 AB4 GLN C 34 GLN C 97 1 64 HELIX 14 AB5 SER D 5 GLN D 107 1 103 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MASTER 621 0 0 14 0 0 0 6 5896 8 0 96 END