data_9U02 # _entry.id 9U02 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.412 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9U02 pdb_00009u02 10.2210/pdb9u02/pdb WWPDB D_1292153534 ? ? EMDB EMD-56480 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2026-04-08 ? 2 'EM metadata' 1 0 2026-04-08 ? 3 FSC 1 0 2026-04-08 ? 4 'Half map' 1 0 2026-04-08 1 5 'Half map' 1 0 2026-04-08 2 6 Image 1 0 2026-04-08 ? 7 'Primary map' 1 0 2026-04-08 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? 3 3 FSC repository 'Initial release' ? ? 4 4 'Half map' repository 'Initial release' ? ? 5 5 'Half map' repository 'Initial release' ? ? 6 6 Image repository 'Initial release' ? ? 7 7 'Primary map' repository 'Initial release' ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9U02 _pdbx_database_status.recvd_initial_deposition_date 2026-01-26 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type EMDB 'Population B fibril generated from the Heterotypic interaction of Abeta40 and Medin.' EMD-54006 'consensus EM volume' EMDB 'Population A fibril generated from the Heterotypic interaction of Abeta40 and Medin.' EMD-54007 'consensus EM volume' EMDB 'Medin fibril generated from the heterotypic interaction of Abeta40 and Medin.' EMD-56480 'associated EM volume' # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 3 frederic.rousseau@kuleuven.be Frederic Rousseau ? 'principal investigator/group leader' 0000-0002-9189-7399 4 joost.schymkowitz@kuleuven.be Joost Schymkowitz ? 'principal investigator/group leader' 0000-0003-2020-0168 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Pradhan, B.' 1 0000-0001-5732-6675 'Kumar, S.T.' 2 0000-0002-4322-3963 'Wagner, J.' 3 0009-0004-8585-6998 'Gallardo, R.' 4 0000-0003-1584-3564 'Zorzini, V.' 5 0000-0002-8727-309X 'Orlando, G.' 6 0000-0002-5935-5258 'Vleeschouwer, M.D.' 7 0000-0001-6889-1928 'Madine, J.' 8 0000-0001-9963-5871 'Louros, N.' 9 0000-0002-4030-1022 'Neher, J.' 10 0000-0003-1346-8924 'Schymkowitz, J.' 11 0000-0003-2020-0168 'Rousseau, F.' 12 0000-0002-9189-7399 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Medin drives Abeta40 to adopt Abeta42-like fibril polymorphs in vitro' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Pradhan, B.' 1 0000-0001-5732-6675 primary 'Kumar, S.T.' 2 0000-0002-4322-3963 primary 'Wagner, J.' 3 0009-0004-8585-6998 primary 'Gallardo, R.' 4 0000-0003-1584-3564 primary 'Zorzini, V.' 5 0000-0002-8727-309X primary 'Orlando, G.' 6 0000-0002-5935-5258 primary 'Vleeschouwer, M.D.' 7 0000-0001-6889-1928 primary 'Madine, J.' 8 0000-0001-9963-5871 primary 'Louros, N.' 9 0000-0002-4030-1022 primary 'Neher, J.' 10 0000-0003-1346-8924 primary 'Schymkowitz, J.' 11 0000-0003-2020-0168 primary 'Rousseau, F.' 12 0000-0002-9189-7399 # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description Lactadherin _entity.formula_weight 5434.945 _entity.pdbx_number_of_molecules 10 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Breast epithelial antigen BA46,HMFG,MFGM,Milk fat globule-EGF factor 8,MFG-E8,SED1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code RLDKQGNFNAWVAGSYGNDQWLQVDLGSSKEVTGIITQGARNFGSVQFVA _entity_poly.pdbx_seq_one_letter_code_can RLDKQGNFNAWVAGSYGNDQWLQVDLGSSKEVTGIITQGARNFGSVQFVA _entity_poly.pdbx_strand_id A,B,F,G,C,H,D,I,E,J _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ARG n 1 2 LEU n 1 3 ASP n 1 4 LYS n 1 5 GLN n 1 6 GLY n 1 7 ASN n 1 8 PHE n 1 9 ASN n 1 10 ALA n 1 11 TRP n 1 12 VAL n 1 13 ALA n 1 14 GLY n 1 15 SER n 1 16 TYR n 1 17 GLY n 1 18 ASN n 1 19 ASP n 1 20 GLN n 1 21 TRP n 1 22 LEU n 1 23 GLN n 1 24 VAL n 1 25 ASP n 1 26 LEU n 1 27 GLY n 1 28 SER n 1 29 SER n 1 30 LYS n 1 31 GLU n 1 32 VAL n 1 33 THR n 1 34 GLY n 1 35 ILE n 1 36 ILE n 1 37 THR n 1 38 GLN n 1 39 GLY n 1 40 ALA n 1 41 ARG n 1 42 ASN n 1 43 PHE n 1 44 GLY n 1 45 SER n 1 46 VAL n 1 47 GLN n 1 48 PHE n 1 49 VAL n 1 50 ALA n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 50 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name human _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details MFGE8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ARG 1 1 1 ARG ARG A . n A 1 2 LEU 2 2 2 LEU LEU A . n A 1 3 ASP 3 3 3 ASP ASP A . n A 1 4 LYS 4 4 4 LYS LYS A . n A 1 5 GLN 5 5 5 GLN GLN A . n A 1 6 GLY 6 6 6 GLY GLY A . n A 1 7 ASN 7 7 7 ASN ASN A . n A 1 8 PHE 8 8 8 PHE PHE A . n A 1 9 ASN 9 9 9 ASN ASN A . n A 1 10 ALA 10 10 10 ALA ALA A . n A 1 11 TRP 11 11 11 TRP TRP A . n A 1 12 VAL 12 12 12 VAL VAL A . n A 1 13 ALA 13 13 13 ALA ALA A . n A 1 14 GLY 14 14 14 GLY GLY A . n A 1 15 SER 15 15 15 SER SER A . n A 1 16 TYR 16 16 16 TYR TYR A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 ASN 18 18 18 ASN ASN A . n A 1 19 ASP 19 19 19 ASP ASP A . n A 1 20 GLN 20 20 20 GLN GLN A . n A 1 21 TRP 21 21 21 TRP TRP A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 GLN 23 23 23 GLN GLN A . n A 1 24 VAL 24 24 24 VAL VAL A . n A 1 25 ASP 25 25 25 ASP ASP A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 SER 28 28 28 SER SER A . n A 1 29 SER 29 29 29 SER SER A . n A 1 30 LYS 30 30 30 LYS LYS A . n A 1 31 GLU 31 31 31 GLU GLU A . n A 1 32 VAL 32 32 32 VAL VAL A . n A 1 33 THR 33 33 33 THR THR A . n A 1 34 GLY 34 34 34 GLY GLY A . n A 1 35 ILE 35 35 35 ILE ILE A . n A 1 36 ILE 36 36 36 ILE ILE A . n A 1 37 THR 37 37 37 THR THR A . n A 1 38 GLN 38 38 38 GLN GLN A . n A 1 39 GLY 39 39 39 GLY GLY A . n A 1 40 ALA 40 40 40 ALA ALA A . n A 1 41 ARG 41 41 41 ARG ARG A . n A 1 42 ASN 42 42 42 ASN ASN A . n A 1 43 PHE 43 43 43 PHE PHE A . n A 1 44 GLY 44 44 44 GLY GLY A . n A 1 45 SER 45 45 45 SER SER A . n A 1 46 VAL 46 46 46 VAL VAL A . n A 1 47 GLN 47 47 47 GLN GLN A . n A 1 48 PHE 48 48 48 PHE PHE A . n A 1 49 VAL 49 49 49 VAL VAL A . n A 1 50 ALA 50 50 50 ALA ALA A . n B 1 1 ARG 1 1 1 ARG ARG B . n B 1 2 LEU 2 2 2 LEU LEU B . n B 1 3 ASP 3 3 3 ASP ASP B . n B 1 4 LYS 4 4 4 LYS LYS B . n B 1 5 GLN 5 5 5 GLN GLN B . n B 1 6 GLY 6 6 6 GLY GLY B . n B 1 7 ASN 7 7 7 ASN ASN B . n B 1 8 PHE 8 8 8 PHE PHE B . n B 1 9 ASN 9 9 9 ASN ASN B . n B 1 10 ALA 10 10 10 ALA ALA B . n B 1 11 TRP 11 11 11 TRP TRP B . n B 1 12 VAL 12 12 12 VAL VAL B . n B 1 13 ALA 13 13 13 ALA ALA B . n B 1 14 GLY 14 14 14 GLY GLY B . n B 1 15 SER 15 15 15 SER SER B . n B 1 16 TYR 16 16 16 TYR TYR B . n B 1 17 GLY 17 17 17 GLY GLY B . n B 1 18 ASN 18 18 18 ASN ASN B . n B 1 19 ASP 19 19 19 ASP ASP B . n B 1 20 GLN 20 20 20 GLN GLN B . n B 1 21 TRP 21 21 21 TRP TRP B . n B 1 22 LEU 22 22 22 LEU LEU B . n B 1 23 GLN 23 23 23 GLN GLN B . n B 1 24 VAL 24 24 24 VAL VAL B . n B 1 25 ASP 25 25 25 ASP ASP B . n B 1 26 LEU 26 26 26 LEU LEU B . n B 1 27 GLY 27 27 27 GLY GLY B . n B 1 28 SER 28 28 28 SER SER B . n B 1 29 SER 29 29 29 SER SER B . n B 1 30 LYS 30 30 30 LYS LYS B . n B 1 31 GLU 31 31 31 GLU GLU B . n B 1 32 VAL 32 32 32 VAL VAL B . n B 1 33 THR 33 33 33 THR THR B . n B 1 34 GLY 34 34 34 GLY GLY B . n B 1 35 ILE 35 35 35 ILE ILE B . n B 1 36 ILE 36 36 36 ILE ILE B . n B 1 37 THR 37 37 37 THR THR B . n B 1 38 GLN 38 38 38 GLN GLN B . n B 1 39 GLY 39 39 39 GLY GLY B . n B 1 40 ALA 40 40 40 ALA ALA B . n B 1 41 ARG 41 41 41 ARG ARG B . n B 1 42 ASN 42 42 42 ASN ASN B . n B 1 43 PHE 43 43 43 PHE PHE B . n B 1 44 GLY 44 44 44 GLY GLY B . n B 1 45 SER 45 45 45 SER SER B . n B 1 46 VAL 46 46 46 VAL VAL B . n B 1 47 GLN 47 47 47 GLN GLN B . n B 1 48 PHE 48 48 48 PHE PHE B . n B 1 49 VAL 49 49 49 VAL VAL B . n B 1 50 ALA 50 50 50 ALA ALA B . n C 1 1 ARG 1 1 1 ARG ARG F . n C 1 2 LEU 2 2 2 LEU LEU F . n C 1 3 ASP 3 3 3 ASP ASP F . n C 1 4 LYS 4 4 4 LYS LYS F . n C 1 5 GLN 5 5 5 GLN GLN F . n C 1 6 GLY 6 6 6 GLY GLY F . n C 1 7 ASN 7 7 7 ASN ASN F . n C 1 8 PHE 8 8 8 PHE PHE F . n C 1 9 ASN 9 9 9 ASN ASN F . n C 1 10 ALA 10 10 10 ALA ALA F . n C 1 11 TRP 11 11 11 TRP TRP F . n C 1 12 VAL 12 12 12 VAL VAL F . n C 1 13 ALA 13 13 13 ALA ALA F . n C 1 14 GLY 14 14 14 GLY GLY F . n C 1 15 SER 15 15 15 SER SER F . n C 1 16 TYR 16 16 16 TYR TYR F . n C 1 17 GLY 17 17 17 GLY GLY F . n C 1 18 ASN 18 18 18 ASN ASN F . n C 1 19 ASP 19 19 19 ASP ASP F . n C 1 20 GLN 20 20 20 GLN GLN F . n C 1 21 TRP 21 21 21 TRP TRP F . n C 1 22 LEU 22 22 22 LEU LEU F . n C 1 23 GLN 23 23 23 GLN GLN F . n C 1 24 VAL 24 24 24 VAL VAL F . n C 1 25 ASP 25 25 25 ASP ASP F . n C 1 26 LEU 26 26 26 LEU LEU F . n C 1 27 GLY 27 27 27 GLY GLY F . n C 1 28 SER 28 28 28 SER SER F . n C 1 29 SER 29 29 29 SER SER F . n C 1 30 LYS 30 30 30 LYS LYS F . n C 1 31 GLU 31 31 31 GLU GLU F . n C 1 32 VAL 32 32 32 VAL VAL F . n C 1 33 THR 33 33 33 THR THR F . n C 1 34 GLY 34 34 34 GLY GLY F . n C 1 35 ILE 35 35 35 ILE ILE F . n C 1 36 ILE 36 36 36 ILE ILE F . n C 1 37 THR 37 37 37 THR THR F . n C 1 38 GLN 38 38 38 GLN GLN F . n C 1 39 GLY 39 39 39 GLY GLY F . n C 1 40 ALA 40 40 40 ALA ALA F . n C 1 41 ARG 41 41 41 ARG ARG F . n C 1 42 ASN 42 42 42 ASN ASN F . n C 1 43 PHE 43 43 43 PHE PHE F . n C 1 44 GLY 44 44 44 GLY GLY F . n C 1 45 SER 45 45 45 SER SER F . n C 1 46 VAL 46 46 46 VAL VAL F . n C 1 47 GLN 47 47 47 GLN GLN F . n C 1 48 PHE 48 48 48 PHE PHE F . n C 1 49 VAL 49 49 49 VAL VAL F . n C 1 50 ALA 50 50 50 ALA ALA F . n D 1 1 ARG 1 1 1 ARG ARG G . n D 1 2 LEU 2 2 2 LEU LEU G . n D 1 3 ASP 3 3 3 ASP ASP G . n D 1 4 LYS 4 4 4 LYS LYS G . n D 1 5 GLN 5 5 5 GLN GLN G . n D 1 6 GLY 6 6 6 GLY GLY G . n D 1 7 ASN 7 7 7 ASN ASN G . n D 1 8 PHE 8 8 8 PHE PHE G . n D 1 9 ASN 9 9 9 ASN ASN G . n D 1 10 ALA 10 10 10 ALA ALA G . n D 1 11 TRP 11 11 11 TRP TRP G . n D 1 12 VAL 12 12 12 VAL VAL G . n D 1 13 ALA 13 13 13 ALA ALA G . n D 1 14 GLY 14 14 14 GLY GLY G . n D 1 15 SER 15 15 15 SER SER G . n D 1 16 TYR 16 16 16 TYR TYR G . n D 1 17 GLY 17 17 17 GLY GLY G . n D 1 18 ASN 18 18 18 ASN ASN G . n D 1 19 ASP 19 19 19 ASP ASP G . n D 1 20 GLN 20 20 20 GLN GLN G . n D 1 21 TRP 21 21 21 TRP TRP G . n D 1 22 LEU 22 22 22 LEU LEU G . n D 1 23 GLN 23 23 23 GLN GLN G . n D 1 24 VAL 24 24 24 VAL VAL G . n D 1 25 ASP 25 25 25 ASP ASP G . n D 1 26 LEU 26 26 26 LEU LEU G . n D 1 27 GLY 27 27 27 GLY GLY G . n D 1 28 SER 28 28 28 SER SER G . n D 1 29 SER 29 29 29 SER SER G . n D 1 30 LYS 30 30 30 LYS LYS G . n D 1 31 GLU 31 31 31 GLU GLU G . n D 1 32 VAL 32 32 32 VAL VAL G . n D 1 33 THR 33 33 33 THR THR G . n D 1 34 GLY 34 34 34 GLY GLY G . n D 1 35 ILE 35 35 35 ILE ILE G . n D 1 36 ILE 36 36 36 ILE ILE G . n D 1 37 THR 37 37 37 THR THR G . n D 1 38 GLN 38 38 38 GLN GLN G . n D 1 39 GLY 39 39 39 GLY GLY G . n D 1 40 ALA 40 40 40 ALA ALA G . n D 1 41 ARG 41 41 41 ARG ARG G . n D 1 42 ASN 42 42 42 ASN ASN G . n D 1 43 PHE 43 43 43 PHE PHE G . n D 1 44 GLY 44 44 44 GLY GLY G . n D 1 45 SER 45 45 45 SER SER G . n D 1 46 VAL 46 46 46 VAL VAL G . n D 1 47 GLN 47 47 47 GLN GLN G . n D 1 48 PHE 48 48 48 PHE PHE G . n D 1 49 VAL 49 49 49 VAL VAL G . n D 1 50 ALA 50 50 50 ALA ALA G . n E 1 1 ARG 1 1 1 ARG ARG C . n E 1 2 LEU 2 2 2 LEU LEU C . n E 1 3 ASP 3 3 3 ASP ASP C . n E 1 4 LYS 4 4 4 LYS LYS C . n E 1 5 GLN 5 5 5 GLN GLN C . n E 1 6 GLY 6 6 6 GLY GLY C . n E 1 7 ASN 7 7 7 ASN ASN C . n E 1 8 PHE 8 8 8 PHE PHE C . n E 1 9 ASN 9 9 9 ASN ASN C . n E 1 10 ALA 10 10 10 ALA ALA C . n E 1 11 TRP 11 11 11 TRP TRP C . n E 1 12 VAL 12 12 12 VAL VAL C . n E 1 13 ALA 13 13 13 ALA ALA C . n E 1 14 GLY 14 14 14 GLY GLY C . n E 1 15 SER 15 15 15 SER SER C . n E 1 16 TYR 16 16 16 TYR TYR C . n E 1 17 GLY 17 17 17 GLY GLY C . n E 1 18 ASN 18 18 18 ASN ASN C . n E 1 19 ASP 19 19 19 ASP ASP C . n E 1 20 GLN 20 20 20 GLN GLN C . n E 1 21 TRP 21 21 21 TRP TRP C . n E 1 22 LEU 22 22 22 LEU LEU C . n E 1 23 GLN 23 23 23 GLN GLN C . n E 1 24 VAL 24 24 24 VAL VAL C . n E 1 25 ASP 25 25 25 ASP ASP C . n E 1 26 LEU 26 26 26 LEU LEU C . n E 1 27 GLY 27 27 27 GLY GLY C . n E 1 28 SER 28 28 28 SER SER C . n E 1 29 SER 29 29 29 SER SER C . n E 1 30 LYS 30 30 30 LYS LYS C . n E 1 31 GLU 31 31 31 GLU GLU C . n E 1 32 VAL 32 32 32 VAL VAL C . n E 1 33 THR 33 33 33 THR THR C . n E 1 34 GLY 34 34 34 GLY GLY C . n E 1 35 ILE 35 35 35 ILE ILE C . n E 1 36 ILE 36 36 36 ILE ILE C . n E 1 37 THR 37 37 37 THR THR C . n E 1 38 GLN 38 38 38 GLN GLN C . n E 1 39 GLY 39 39 39 GLY GLY C . n E 1 40 ALA 40 40 40 ALA ALA C . n E 1 41 ARG 41 41 41 ARG ARG C . n E 1 42 ASN 42 42 42 ASN ASN C . n E 1 43 PHE 43 43 43 PHE PHE C . n E 1 44 GLY 44 44 44 GLY GLY C . n E 1 45 SER 45 45 45 SER SER C . n E 1 46 VAL 46 46 46 VAL VAL C . n E 1 47 GLN 47 47 47 GLN GLN C . n E 1 48 PHE 48 48 48 PHE PHE C . n E 1 49 VAL 49 49 49 VAL VAL C . n E 1 50 ALA 50 50 50 ALA ALA C . n F 1 1 ARG 1 1 1 ARG ARG H . n F 1 2 LEU 2 2 2 LEU LEU H . n F 1 3 ASP 3 3 3 ASP ASP H . n F 1 4 LYS 4 4 4 LYS LYS H . n F 1 5 GLN 5 5 5 GLN GLN H . n F 1 6 GLY 6 6 6 GLY GLY H . n F 1 7 ASN 7 7 7 ASN ASN H . n F 1 8 PHE 8 8 8 PHE PHE H . n F 1 9 ASN 9 9 9 ASN ASN H . n F 1 10 ALA 10 10 10 ALA ALA H . n F 1 11 TRP 11 11 11 TRP TRP H . n F 1 12 VAL 12 12 12 VAL VAL H . n F 1 13 ALA 13 13 13 ALA ALA H . n F 1 14 GLY 14 14 14 GLY GLY H . n F 1 15 SER 15 15 15 SER SER H . n F 1 16 TYR 16 16 16 TYR TYR H . n F 1 17 GLY 17 17 17 GLY GLY H . n F 1 18 ASN 18 18 18 ASN ASN H . n F 1 19 ASP 19 19 19 ASP ASP H . n F 1 20 GLN 20 20 20 GLN GLN H . n F 1 21 TRP 21 21 21 TRP TRP H . n F 1 22 LEU 22 22 22 LEU LEU H . n F 1 23 GLN 23 23 23 GLN GLN H . n F 1 24 VAL 24 24 24 VAL VAL H . n F 1 25 ASP 25 25 25 ASP ASP H . n F 1 26 LEU 26 26 26 LEU LEU H . n F 1 27 GLY 27 27 27 GLY GLY H . n F 1 28 SER 28 28 28 SER SER H . n F 1 29 SER 29 29 29 SER SER H . n F 1 30 LYS 30 30 30 LYS LYS H . n F 1 31 GLU 31 31 31 GLU GLU H . n F 1 32 VAL 32 32 32 VAL VAL H . n F 1 33 THR 33 33 33 THR THR H . n F 1 34 GLY 34 34 34 GLY GLY H . n F 1 35 ILE 35 35 35 ILE ILE H . n F 1 36 ILE 36 36 36 ILE ILE H . n F 1 37 THR 37 37 37 THR THR H . n F 1 38 GLN 38 38 38 GLN GLN H . n F 1 39 GLY 39 39 39 GLY GLY H . n F 1 40 ALA 40 40 40 ALA ALA H . n F 1 41 ARG 41 41 41 ARG ARG H . n F 1 42 ASN 42 42 42 ASN ASN H . n F 1 43 PHE 43 43 43 PHE PHE H . n F 1 44 GLY 44 44 44 GLY GLY H . n F 1 45 SER 45 45 45 SER SER H . n F 1 46 VAL 46 46 46 VAL VAL H . n F 1 47 GLN 47 47 47 GLN GLN H . n F 1 48 PHE 48 48 48 PHE PHE H . n F 1 49 VAL 49 49 49 VAL VAL H . n F 1 50 ALA 50 50 50 ALA ALA H . n G 1 1 ARG 1 1 1 ARG ARG D . n G 1 2 LEU 2 2 2 LEU LEU D . n G 1 3 ASP 3 3 3 ASP ASP D . n G 1 4 LYS 4 4 4 LYS LYS D . n G 1 5 GLN 5 5 5 GLN GLN D . n G 1 6 GLY 6 6 6 GLY GLY D . n G 1 7 ASN 7 7 7 ASN ASN D . n G 1 8 PHE 8 8 8 PHE PHE D . n G 1 9 ASN 9 9 9 ASN ASN D . n G 1 10 ALA 10 10 10 ALA ALA D . n G 1 11 TRP 11 11 11 TRP TRP D . n G 1 12 VAL 12 12 12 VAL VAL D . n G 1 13 ALA 13 13 13 ALA ALA D . n G 1 14 GLY 14 14 14 GLY GLY D . n G 1 15 SER 15 15 15 SER SER D . n G 1 16 TYR 16 16 16 TYR TYR D . n G 1 17 GLY 17 17 17 GLY GLY D . n G 1 18 ASN 18 18 18 ASN ASN D . n G 1 19 ASP 19 19 19 ASP ASP D . n G 1 20 GLN 20 20 20 GLN GLN D . n G 1 21 TRP 21 21 21 TRP TRP D . n G 1 22 LEU 22 22 22 LEU LEU D . n G 1 23 GLN 23 23 23 GLN GLN D . n G 1 24 VAL 24 24 24 VAL VAL D . n G 1 25 ASP 25 25 25 ASP ASP D . n G 1 26 LEU 26 26 26 LEU LEU D . n G 1 27 GLY 27 27 27 GLY GLY D . n G 1 28 SER 28 28 28 SER SER D . n G 1 29 SER 29 29 29 SER SER D . n G 1 30 LYS 30 30 30 LYS LYS D . n G 1 31 GLU 31 31 31 GLU GLU D . n G 1 32 VAL 32 32 32 VAL VAL D . n G 1 33 THR 33 33 33 THR THR D . n G 1 34 GLY 34 34 34 GLY GLY D . n G 1 35 ILE 35 35 35 ILE ILE D . n G 1 36 ILE 36 36 36 ILE ILE D . n G 1 37 THR 37 37 37 THR THR D . n G 1 38 GLN 38 38 38 GLN GLN D . n G 1 39 GLY 39 39 39 GLY GLY D . n G 1 40 ALA 40 40 40 ALA ALA D . n G 1 41 ARG 41 41 41 ARG ARG D . n G 1 42 ASN 42 42 42 ASN ASN D . n G 1 43 PHE 43 43 43 PHE PHE D . n G 1 44 GLY 44 44 44 GLY GLY D . n G 1 45 SER 45 45 45 SER SER D . n G 1 46 VAL 46 46 46 VAL VAL D . n G 1 47 GLN 47 47 47 GLN GLN D . n G 1 48 PHE 48 48 48 PHE PHE D . n G 1 49 VAL 49 49 49 VAL VAL D . n G 1 50 ALA 50 50 50 ALA ALA D . n H 1 1 ARG 1 1 1 ARG ARG I . n H 1 2 LEU 2 2 2 LEU LEU I . n H 1 3 ASP 3 3 3 ASP ASP I . n H 1 4 LYS 4 4 4 LYS LYS I . n H 1 5 GLN 5 5 5 GLN GLN I . n H 1 6 GLY 6 6 6 GLY GLY I . n H 1 7 ASN 7 7 7 ASN ASN I . n H 1 8 PHE 8 8 8 PHE PHE I . n H 1 9 ASN 9 9 9 ASN ASN I . n H 1 10 ALA 10 10 10 ALA ALA I . n H 1 11 TRP 11 11 11 TRP TRP I . n H 1 12 VAL 12 12 12 VAL VAL I . n H 1 13 ALA 13 13 13 ALA ALA I . n H 1 14 GLY 14 14 14 GLY GLY I . n H 1 15 SER 15 15 15 SER SER I . n H 1 16 TYR 16 16 16 TYR TYR I . n H 1 17 GLY 17 17 17 GLY GLY I . n H 1 18 ASN 18 18 18 ASN ASN I . n H 1 19 ASP 19 19 19 ASP ASP I . n H 1 20 GLN 20 20 20 GLN GLN I . n H 1 21 TRP 21 21 21 TRP TRP I . n H 1 22 LEU 22 22 22 LEU LEU I . n H 1 23 GLN 23 23 23 GLN GLN I . n H 1 24 VAL 24 24 24 VAL VAL I . n H 1 25 ASP 25 25 25 ASP ASP I . n H 1 26 LEU 26 26 26 LEU LEU I . n H 1 27 GLY 27 27 27 GLY GLY I . n H 1 28 SER 28 28 28 SER SER I . n H 1 29 SER 29 29 29 SER SER I . n H 1 30 LYS 30 30 30 LYS LYS I . n H 1 31 GLU 31 31 31 GLU GLU I . n H 1 32 VAL 32 32 32 VAL VAL I . n H 1 33 THR 33 33 33 THR THR I . n H 1 34 GLY 34 34 34 GLY GLY I . n H 1 35 ILE 35 35 35 ILE ILE I . n H 1 36 ILE 36 36 36 ILE ILE I . n H 1 37 THR 37 37 37 THR THR I . n H 1 38 GLN 38 38 38 GLN GLN I . n H 1 39 GLY 39 39 39 GLY GLY I . n H 1 40 ALA 40 40 40 ALA ALA I . n H 1 41 ARG 41 41 41 ARG ARG I . n H 1 42 ASN 42 42 42 ASN ASN I . n H 1 43 PHE 43 43 43 PHE PHE I . n H 1 44 GLY 44 44 44 GLY GLY I . n H 1 45 SER 45 45 45 SER SER I . n H 1 46 VAL 46 46 46 VAL VAL I . n H 1 47 GLN 47 47 47 GLN GLN I . n H 1 48 PHE 48 48 48 PHE PHE I . n H 1 49 VAL 49 49 49 VAL VAL I . n H 1 50 ALA 50 50 50 ALA ALA I . n I 1 1 ARG 1 1 1 ARG ARG E . n I 1 2 LEU 2 2 2 LEU LEU E . n I 1 3 ASP 3 3 3 ASP ASP E . n I 1 4 LYS 4 4 4 LYS LYS E . n I 1 5 GLN 5 5 5 GLN GLN E . n I 1 6 GLY 6 6 6 GLY GLY E . n I 1 7 ASN 7 7 7 ASN ASN E . n I 1 8 PHE 8 8 8 PHE PHE E . n I 1 9 ASN 9 9 9 ASN ASN E . n I 1 10 ALA 10 10 10 ALA ALA E . n I 1 11 TRP 11 11 11 TRP TRP E . n I 1 12 VAL 12 12 12 VAL VAL E . n I 1 13 ALA 13 13 13 ALA ALA E . n I 1 14 GLY 14 14 14 GLY GLY E . n I 1 15 SER 15 15 15 SER SER E . n I 1 16 TYR 16 16 16 TYR TYR E . n I 1 17 GLY 17 17 17 GLY GLY E . n I 1 18 ASN 18 18 18 ASN ASN E . n I 1 19 ASP 19 19 19 ASP ASP E . n I 1 20 GLN 20 20 20 GLN GLN E . n I 1 21 TRP 21 21 21 TRP TRP E . n I 1 22 LEU 22 22 22 LEU LEU E . n I 1 23 GLN 23 23 23 GLN GLN E . n I 1 24 VAL 24 24 24 VAL VAL E . n I 1 25 ASP 25 25 25 ASP ASP E . n I 1 26 LEU 26 26 26 LEU LEU E . n I 1 27 GLY 27 27 27 GLY GLY E . n I 1 28 SER 28 28 28 SER SER E . n I 1 29 SER 29 29 29 SER SER E . n I 1 30 LYS 30 30 30 LYS LYS E . n I 1 31 GLU 31 31 31 GLU GLU E . n I 1 32 VAL 32 32 32 VAL VAL E . n I 1 33 THR 33 33 33 THR THR E . n I 1 34 GLY 34 34 34 GLY GLY E . n I 1 35 ILE 35 35 35 ILE ILE E . n I 1 36 ILE 36 36 36 ILE ILE E . n I 1 37 THR 37 37 37 THR THR E . n I 1 38 GLN 38 38 38 GLN GLN E . n I 1 39 GLY 39 39 39 GLY GLY E . n I 1 40 ALA 40 40 40 ALA ALA E . n I 1 41 ARG 41 41 41 ARG ARG E . n I 1 42 ASN 42 42 42 ASN ASN E . n I 1 43 PHE 43 43 43 PHE PHE E . n I 1 44 GLY 44 44 44 GLY GLY E . n I 1 45 SER 45 45 45 SER SER E . n I 1 46 VAL 46 46 46 VAL VAL E . n I 1 47 GLN 47 47 47 GLN GLN E . n I 1 48 PHE 48 48 48 PHE PHE E . n I 1 49 VAL 49 49 49 VAL VAL E . n I 1 50 ALA 50 50 50 ALA ALA E . n J 1 1 ARG 1 1 1 ARG ARG J . n J 1 2 LEU 2 2 2 LEU LEU J . n J 1 3 ASP 3 3 3 ASP ASP J . n J 1 4 LYS 4 4 4 LYS LYS J . n J 1 5 GLN 5 5 5 GLN GLN J . n J 1 6 GLY 6 6 6 GLY GLY J . n J 1 7 ASN 7 7 7 ASN ASN J . n J 1 8 PHE 8 8 8 PHE PHE J . n J 1 9 ASN 9 9 9 ASN ASN J . n J 1 10 ALA 10 10 10 ALA ALA J . n J 1 11 TRP 11 11 11 TRP TRP J . n J 1 12 VAL 12 12 12 VAL VAL J . n J 1 13 ALA 13 13 13 ALA ALA J . n J 1 14 GLY 14 14 14 GLY GLY J . n J 1 15 SER 15 15 15 SER SER J . n J 1 16 TYR 16 16 16 TYR TYR J . n J 1 17 GLY 17 17 17 GLY GLY J . n J 1 18 ASN 18 18 18 ASN ASN J . n J 1 19 ASP 19 19 19 ASP ASP J . n J 1 20 GLN 20 20 20 GLN GLN J . n J 1 21 TRP 21 21 21 TRP TRP J . n J 1 22 LEU 22 22 22 LEU LEU J . n J 1 23 GLN 23 23 23 GLN GLN J . n J 1 24 VAL 24 24 24 VAL VAL J . n J 1 25 ASP 25 25 25 ASP ASP J . n J 1 26 LEU 26 26 26 LEU LEU J . n J 1 27 GLY 27 27 27 GLY GLY J . n J 1 28 SER 28 28 28 SER SER J . n J 1 29 SER 29 29 29 SER SER J . n J 1 30 LYS 30 30 30 LYS LYS J . n J 1 31 GLU 31 31 31 GLU GLU J . n J 1 32 VAL 32 32 32 VAL VAL J . n J 1 33 THR 33 33 33 THR THR J . n J 1 34 GLY 34 34 34 GLY GLY J . n J 1 35 ILE 35 35 35 ILE ILE J . n J 1 36 ILE 36 36 36 ILE ILE J . n J 1 37 THR 37 37 37 THR THR J . n J 1 38 GLN 38 38 38 GLN GLN J . n J 1 39 GLY 39 39 39 GLY GLY J . n J 1 40 ALA 40 40 40 ALA ALA J . n J 1 41 ARG 41 41 41 ARG ARG J . n J 1 42 ASN 42 42 42 ASN ASN J . n J 1 43 PHE 43 43 43 PHE PHE J . n J 1 44 GLY 44 44 44 GLY GLY J . n J 1 45 SER 45 45 45 SER SER J . n J 1 46 VAL 46 46 46 VAL VAL J . n J 1 47 GLN 47 47 47 GLN GLN J . n J 1 48 PHE 48 48 48 PHE PHE J . n J 1 49 VAL 49 49 49 VAL VAL J . n J 1 50 ALA 50 50 50 ALA ALA J . n # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9U02 _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9U02 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9U02 _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9U02 _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.70 _refine.ls_d_res_low ? _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work ? _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'REAL-SPACE (WEIGHTED MAP SUM AT ATOM CENTERS)' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_Zscore _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.003 ? 3910 ? f_bond_d ? ? ? 'ELECTRON MICROSCOPY' ? 0.453 ? 5280 ? f_angle_d ? ? ? 'ELECTRON MICROSCOPY' ? 4.229 ? 520 ? f_dihedral_angle_d ? ? ? 'ELECTRON MICROSCOPY' ? 0.066 ? 550 ? f_chiral_restr ? ? ? 'ELECTRON MICROSCOPY' ? 0.002 ? 700 ? f_plane_restr ? ? ? # _struct.entry_id 9U02 _struct.title 'Medin fibril generated from the heterotypic interaction of Abeta40 and Medin.' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9U02 _struct_keywords.text 'Medin, Amyloid, Aggregation, MFGE8, Neurodegeneration, PROTEIN FIBRIL' _struct_keywords.pdbx_keywords 'PROTEIN FIBRIL' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 1 ? F N N 1 ? G N N 1 ? H N N 1 ? I N N 1 ? J N N 1 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code MFGM_HUMAN _struct_ref.pdbx_db_accession Q08431 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code RLDKQGNFNAWVAGSYGNDQWLQVDLGSSKEVTGIITQGARNFGSVQFVA _struct_ref.pdbx_align_begin 268 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9U02 A 1 ? 50 ? Q08431 268 ? 317 ? 1 50 2 1 9U02 B 1 ? 50 ? Q08431 268 ? 317 ? 1 50 3 1 9U02 F 1 ? 50 ? Q08431 268 ? 317 ? 1 50 4 1 9U02 G 1 ? 50 ? Q08431 268 ? 317 ? 1 50 5 1 9U02 C 1 ? 50 ? Q08431 268 ? 317 ? 1 50 6 1 9U02 H 1 ? 50 ? Q08431 268 ? 317 ? 1 50 7 1 9U02 D 1 ? 50 ? Q08431 268 ? 317 ? 1 50 8 1 9U02 I 1 ? 50 ? Q08431 268 ? 317 ? 1 50 9 1 9U02 E 1 ? 50 ? Q08431 268 ? 317 ? 1 50 10 1 9U02 J 1 ? 50 ? Q08431 268 ? 317 ? 1 50 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details decameric _pdbx_struct_assembly.oligomeric_count 10 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'point symmetry operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 0.99939 _pdbx_struct_oper_list.matrix[1][2] 0.03505 _pdbx_struct_oper_list.matrix[1][3] 0.0 _pdbx_struct_oper_list.vector[1] 0.0 _pdbx_struct_oper_list.matrix[2][1] -0.03505 _pdbx_struct_oper_list.matrix[2][2] 0.99939 _pdbx_struct_oper_list.matrix[2][3] 0.0 _pdbx_struct_oper_list.vector[2] 0.0 _pdbx_struct_oper_list.matrix[3][1] 0.0 _pdbx_struct_oper_list.matrix[3][2] 0.0 _pdbx_struct_oper_list.matrix[3][3] 1.0 _pdbx_struct_oper_list.vector[3] 4.8 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 5 ? AA3 ? 5 ? AA4 ? 5 ? AA5 ? 5 ? AA6 ? 5 ? AA7 ? 5 ? AA8 ? 5 ? AA9 ? 5 ? AB1 ? 5 ? AB2 ? 5 ? AB3 ? 5 ? AB4 ? 5 ? AB5 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA2 1 2 ? parallel AA2 2 3 ? parallel AA2 3 4 ? parallel AA2 4 5 ? parallel AA3 1 2 ? parallel AA3 2 3 ? parallel AA3 3 4 ? parallel AA3 4 5 ? parallel AA4 1 2 ? parallel AA4 2 3 ? parallel AA4 3 4 ? parallel AA4 4 5 ? parallel AA5 1 2 ? parallel AA5 2 3 ? parallel AA5 3 4 ? parallel AA5 4 5 ? parallel AA6 1 2 ? parallel AA6 2 3 ? parallel AA6 3 4 ? parallel AA6 4 5 ? parallel AA7 1 2 ? parallel AA7 2 3 ? parallel AA7 3 4 ? parallel AA7 4 5 ? parallel AA8 1 2 ? parallel AA8 2 3 ? parallel AA8 3 4 ? parallel AA8 4 5 ? parallel AA9 1 2 ? parallel AA9 2 3 ? parallel AA9 3 4 ? parallel AA9 4 5 ? parallel AB1 1 2 ? parallel AB1 2 3 ? parallel AB1 3 4 ? parallel AB1 4 5 ? parallel AB2 1 2 ? parallel AB2 2 3 ? parallel AB2 3 4 ? parallel AB2 4 5 ? parallel AB3 1 2 ? parallel AB3 2 3 ? parallel AB3 3 4 ? parallel AB3 4 5 ? parallel AB4 1 2 ? parallel AB4 2 3 ? parallel AB4 3 4 ? parallel AB4 4 5 ? parallel AB5 1 2 ? parallel AB5 2 3 ? parallel AB5 3 4 ? parallel AB5 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LEU A 2 ? ASP A 3 ? LEU A 2 ASP A 3 AA1 2 LEU B 2 ? ASP B 3 ? LEU B 2 ASP B 3 AA1 3 LEU E 2 ? ASP E 3 ? LEU C 2 ASP C 3 AA1 4 LEU G 2 ? ASP G 3 ? LEU D 2 ASP D 3 AA1 5 LEU I 2 ? ASP I 3 ? LEU E 2 ASP E 3 AA2 1 ASN A 7 ? ASN A 9 ? ASN A 7 ASN A 9 AA2 2 ASN B 7 ? ASN B 9 ? ASN B 7 ASN B 9 AA2 3 ASN E 7 ? ASN E 9 ? ASN C 7 ASN C 9 AA2 4 ASN G 7 ? ASN G 9 ? ASN D 7 ASN D 9 AA2 5 ASN I 7 ? ASN I 9 ? ASN E 7 ASN E 9 AA3 1 VAL A 12 ? ALA A 13 ? VAL A 12 ALA A 13 AA3 2 VAL B 12 ? ALA B 13 ? VAL B 12 ALA B 13 AA3 3 VAL E 12 ? ALA E 13 ? VAL C 12 ALA C 13 AA3 4 VAL G 12 ? ALA G 13 ? VAL D 12 ALA D 13 AA3 5 VAL I 12 ? ALA I 13 ? VAL E 12 ALA E 13 AA4 1 GLN A 20 ? ASP A 25 ? GLN A 20 ASP A 25 AA4 2 GLN B 20 ? ASP B 25 ? GLN B 20 ASP B 25 AA4 3 GLN E 20 ? ASP E 25 ? GLN C 20 ASP C 25 AA4 4 GLN G 20 ? ASP G 25 ? GLN D 20 ASP D 25 AA4 5 GLN I 20 ? ASP I 25 ? GLN E 20 ASP E 25 AA5 1 LYS A 30 ? THR A 37 ? LYS A 30 THR A 37 AA5 2 LYS B 30 ? THR B 37 ? LYS B 30 THR B 37 AA5 3 LYS E 30 ? THR E 37 ? LYS C 30 THR C 37 AA5 4 LYS G 30 ? THR G 37 ? LYS D 30 THR D 37 AA5 5 LYS I 30 ? THR I 37 ? LYS E 30 THR E 37 AA6 1 ARG A 41 ? PHE A 43 ? ARG A 41 PHE A 43 AA6 2 ARG B 41 ? PHE B 43 ? ARG B 41 PHE B 43 AA6 3 ARG E 41 ? PHE E 43 ? ARG C 41 PHE C 43 AA6 4 ARG G 41 ? PHE G 43 ? ARG D 41 PHE D 43 AA6 5 ARG I 41 ? PHE I 43 ? ARG E 41 PHE E 43 AA7 1 VAL A 46 ? VAL A 49 ? VAL A 46 VAL A 49 AA7 2 VAL B 46 ? VAL B 49 ? VAL B 46 VAL B 49 AA7 3 VAL E 46 ? VAL E 49 ? VAL C 46 VAL C 49 AA7 4 VAL G 46 ? VAL G 49 ? VAL D 46 VAL D 49 AA7 5 VAL I 46 ? VAL I 49 ? VAL E 46 VAL E 49 AA8 1 LEU C 2 ? ASP C 3 ? LEU F 2 ASP F 3 AA8 2 LEU D 2 ? ASP D 3 ? LEU G 2 ASP G 3 AA8 3 LEU F 2 ? ASP F 3 ? LEU H 2 ASP H 3 AA8 4 LEU H 2 ? ASP H 3 ? LEU I 2 ASP I 3 AA8 5 LEU J 2 ? ASP J 3 ? LEU J 2 ASP J 3 AA9 1 ASN C 7 ? ASN C 9 ? ASN F 7 ASN F 9 AA9 2 ASN D 7 ? ASN D 9 ? ASN G 7 ASN G 9 AA9 3 ASN F 7 ? ASN F 9 ? ASN H 7 ASN H 9 AA9 4 ASN H 7 ? ASN H 9 ? ASN I 7 ASN I 9 AA9 5 ASN J 7 ? ASN J 9 ? ASN J 7 ASN J 9 AB1 1 VAL C 12 ? ALA C 13 ? VAL F 12 ALA F 13 AB1 2 VAL D 12 ? ALA D 13 ? VAL G 12 ALA G 13 AB1 3 VAL F 12 ? ALA F 13 ? VAL H 12 ALA H 13 AB1 4 VAL H 12 ? ALA H 13 ? VAL I 12 ALA I 13 AB1 5 VAL J 12 ? ALA J 13 ? VAL J 12 ALA J 13 AB2 1 GLN C 20 ? ASP C 25 ? GLN F 20 ASP F 25 AB2 2 GLN D 20 ? ASP D 25 ? GLN G 20 ASP G 25 AB2 3 GLN F 20 ? ASP F 25 ? GLN H 20 ASP H 25 AB2 4 GLN H 20 ? ASP H 25 ? GLN I 20 ASP I 25 AB2 5 GLN J 20 ? ASP J 25 ? GLN J 20 ASP J 25 AB3 1 LYS C 30 ? THR C 37 ? LYS F 30 THR F 37 AB3 2 LYS D 30 ? THR D 37 ? LYS G 30 THR G 37 AB3 3 LYS F 30 ? THR F 37 ? LYS H 30 THR H 37 AB3 4 LYS H 30 ? THR H 37 ? LYS I 30 THR I 37 AB3 5 LYS J 30 ? THR J 37 ? LYS J 30 THR J 37 AB4 1 ARG C 41 ? PHE C 43 ? ARG F 41 PHE F 43 AB4 2 ARG D 41 ? PHE D 43 ? ARG G 41 PHE G 43 AB4 3 ARG F 41 ? PHE F 43 ? ARG H 41 PHE H 43 AB4 4 ARG H 41 ? PHE H 43 ? ARG I 41 PHE I 43 AB4 5 ARG J 41 ? PHE J 43 ? ARG J 41 PHE J 43 AB5 1 VAL C 46 ? VAL C 49 ? VAL F 46 VAL F 49 AB5 2 VAL D 46 ? VAL D 49 ? VAL G 46 VAL G 49 AB5 3 VAL F 46 ? VAL F 49 ? VAL H 46 VAL H 49 AB5 4 VAL H 46 ? VAL H 49 ? VAL I 46 VAL I 49 AB5 5 VAL J 46 ? VAL J 49 ? VAL J 46 VAL J 49 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ASP A 3 ? N ASP A 3 O LEU B 2 ? O LEU B 2 AA1 2 3 N ASP B 3 ? N ASP B 3 O LEU E 2 ? O LEU C 2 AA1 3 4 N ASP E 3 ? N ASP C 3 O LEU G 2 ? O LEU D 2 AA1 4 5 N ASP G 3 ? N ASP D 3 O LEU I 2 ? O LEU E 2 AA2 1 2 N PHE A 8 ? N PHE A 8 O ASN B 7 ? O ASN B 7 AA2 2 3 N PHE B 8 ? N PHE B 8 O ASN E 7 ? O ASN C 7 AA2 3 4 N PHE E 8 ? N PHE C 8 O ASN G 7 ? O ASN D 7 AA2 4 5 N PHE G 8 ? N PHE D 8 O ASN I 7 ? O ASN E 7 AA3 1 2 N VAL A 12 ? N VAL A 12 O ALA B 13 ? O ALA B 13 AA3 2 3 N VAL B 12 ? N VAL B 12 O ALA E 13 ? O ALA C 13 AA3 3 4 N VAL E 12 ? N VAL C 12 O ALA G 13 ? O ALA D 13 AA3 4 5 N VAL G 12 ? N VAL D 12 O ALA I 13 ? O ALA E 13 AA4 1 2 N TRP A 21 ? N TRP A 21 O GLN B 20 ? O GLN B 20 AA4 2 3 N GLN B 23 ? N GLN B 23 O VAL E 24 ? O VAL C 24 AA4 3 4 N TRP E 21 ? N TRP C 21 O GLN G 20 ? O GLN D 20 AA4 4 5 N GLN G 23 ? N GLN D 23 O VAL I 24 ? O VAL E 24 AA5 1 2 N ILE A 35 ? N ILE A 35 O ILE B 36 ? O ILE B 36 AA5 2 3 N ILE B 35 ? N ILE B 35 O ILE E 36 ? O ILE C 36 AA5 3 4 N ILE E 35 ? N ILE C 35 O ILE G 36 ? O ILE D 36 AA5 4 5 N ILE G 35 ? N ILE D 35 O ILE I 36 ? O ILE E 36 AA6 1 2 N ASN A 42 ? N ASN A 42 O ARG B 41 ? O ARG B 41 AA6 2 3 N ASN B 42 ? N ASN B 42 O ARG E 41 ? O ARG C 41 AA6 3 4 N ASN E 42 ? N ASN C 42 O ARG G 41 ? O ARG D 41 AA6 4 5 N ASN G 42 ? N ASN D 42 O ARG I 41 ? O ARG E 41 AA7 1 2 N VAL A 49 ? N VAL A 49 O PHE B 48 ? O PHE B 48 AA7 2 3 N VAL B 49 ? N VAL B 49 O PHE E 48 ? O PHE C 48 AA7 3 4 N VAL E 49 ? N VAL C 49 O PHE G 48 ? O PHE D 48 AA7 4 5 N VAL G 49 ? N VAL D 49 O PHE I 48 ? O PHE E 48 AA8 1 2 N ASP C 3 ? N ASP F 3 O LEU D 2 ? O LEU G 2 AA8 2 3 N ASP D 3 ? N ASP G 3 O LEU F 2 ? O LEU H 2 AA8 3 4 N ASP F 3 ? N ASP H 3 O LEU H 2 ? O LEU I 2 AA8 4 5 N ASP H 3 ? N ASP I 3 O LEU J 2 ? O LEU J 2 AA9 1 2 N PHE C 8 ? N PHE F 8 O ASN D 7 ? O ASN G 7 AA9 2 3 N PHE D 8 ? N PHE G 8 O ASN F 7 ? O ASN H 7 AA9 3 4 N PHE F 8 ? N PHE H 8 O ASN H 7 ? O ASN I 7 AA9 4 5 N PHE H 8 ? N PHE I 8 O ASN J 7 ? O ASN J 7 AB1 1 2 N VAL C 12 ? N VAL F 12 O ALA D 13 ? O ALA G 13 AB1 2 3 N VAL D 12 ? N VAL G 12 O ALA F 13 ? O ALA H 13 AB1 3 4 N VAL F 12 ? N VAL H 12 O ALA H 13 ? O ALA I 13 AB1 4 5 N VAL H 12 ? N VAL I 12 O ALA J 13 ? O ALA J 13 AB2 1 2 N TRP C 21 ? N TRP F 21 O GLN D 20 ? O GLN G 20 AB2 2 3 N TRP D 21 ? N TRP G 21 O GLN F 20 ? O GLN H 20 AB2 3 4 N GLN F 23 ? N GLN H 23 O VAL H 24 ? O VAL I 24 AB2 4 5 N TRP H 21 ? N TRP I 21 O GLN J 20 ? O GLN J 20 AB3 1 2 N ILE C 35 ? N ILE F 35 O ILE D 36 ? O ILE G 36 AB3 2 3 N ILE D 35 ? N ILE G 35 O ILE F 36 ? O ILE H 36 AB3 3 4 N ILE F 35 ? N ILE H 35 O ILE H 36 ? O ILE I 36 AB3 4 5 N ILE H 35 ? N ILE I 35 O ILE J 36 ? O ILE J 36 AB4 1 2 N ASN C 42 ? N ASN F 42 O ARG D 41 ? O ARG G 41 AB4 2 3 N ASN D 42 ? N ASN G 42 O ARG F 41 ? O ARG H 41 AB4 3 4 N ASN F 42 ? N ASN H 42 O ARG H 41 ? O ARG I 41 AB4 4 5 N ASN H 42 ? N ASN I 42 O ARG J 41 ? O ARG J 41 AB5 1 2 N VAL C 49 ? N VAL F 49 O PHE D 48 ? O PHE G 48 AB5 2 3 N VAL D 49 ? N VAL G 49 O PHE F 48 ? O PHE H 48 AB5 3 4 N VAL F 49 ? N VAL H 49 O PHE H 48 ? O PHE I 48 AB5 4 5 N VAL H 49 ? N VAL I 49 O PHE J 48 ? O PHE J 48 # _pdbx_entry_details.entry_id 9U02 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 5 ? ? -66.01 96.89 2 1 TYR A 16 ? ? 62.51 174.15 3 1 GLN B 5 ? ? -66.11 97.02 4 1 TYR B 16 ? ? 62.52 174.13 5 1 GLN F 5 ? ? -66.15 96.97 6 1 TYR F 16 ? ? 62.45 174.18 7 1 GLN G 5 ? ? -66.15 96.99 8 1 TYR G 16 ? ? 62.47 174.20 9 1 GLN C 5 ? ? -66.08 96.98 10 1 TYR C 16 ? ? 62.45 174.20 11 1 GLN H 5 ? ? -66.08 97.01 12 1 TYR H 16 ? ? 62.48 174.20 13 1 GLN D 5 ? ? -66.07 96.96 14 1 TYR D 16 ? ? 62.58 174.16 15 1 GLN I 5 ? ? -66.06 96.94 16 1 TYR I 16 ? ? 62.44 174.16 17 1 GLN E 5 ? ? -66.09 97.02 18 1 TYR E 16 ? ? 62.50 174.15 19 1 GLN J 5 ? ? -66.09 97.01 20 1 TYR J 16 ? ? 62.52 174.17 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9U02 _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space REAL _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 9U02 _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 2.70 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 47541 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type HELICAL # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.5 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.name ;In vitro assembled Medin, resulting from the co-aggregation of recombinantly purified Amyloid Beta 40 peptide with synthetically produced Medin. ; _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_imaging.entry_id 9U02 _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER' _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 2.7 _em_imaging.nominal_defocus_min 700 _em_imaging.nominal_defocus_max 1800 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification 165000 _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter 50.0 _em_imaging.specimen_id 1 _em_imaging.cryogen NITROGEN _em_imaging.objective_aperture ? _em_imaging.microscope_serial_number ? _em_imaging.microscope_version ? # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material COPPER _em_sample_support.grid_mesh_size 300 _em_sample_support.grid_type 'Quantifoil R1.2/1.3' _em_sample_support.details ? _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 9U02 _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity 98 _em_vitrification.temp ? _em_vitrification.chamber_temperature 298 _em_vitrification.instrument 'FEI VITROBOT MARK II' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 9U02 _em_experiment.id 1 _em_experiment.reconstruction_method HELICAL _em_experiment.aggregation_state FILAMENT _em_experiment.entity_assembly_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 ILE N N N N 123 ILE CA C N S 124 ILE C C N N 125 ILE O O N N 126 ILE CB C N S 127 ILE CG1 C N N 128 ILE CG2 C N N 129 ILE CD1 C N N 130 ILE OXT O N N 131 ILE H H N N 132 ILE H2 H N N 133 ILE HA H N N 134 ILE HB H N N 135 ILE HG12 H N N 136 ILE HG13 H N N 137 ILE HG21 H N N 138 ILE HG22 H N N 139 ILE HG23 H N N 140 ILE HD11 H N N 141 ILE HD12 H N N 142 ILE HD13 H N N 143 ILE HXT H N N 144 LEU N N N N 145 LEU CA C N S 146 LEU C C N N 147 LEU O O N N 148 LEU CB C N N 149 LEU CG C N N 150 LEU CD1 C N N 151 LEU CD2 C N N 152 LEU OXT O N N 153 LEU H H N N 154 LEU H2 H N N 155 LEU HA H N N 156 LEU HB2 H N N 157 LEU HB3 H N N 158 LEU HG H N N 159 LEU HD11 H N N 160 LEU HD12 H N N 161 LEU HD13 H N N 162 LEU HD21 H N N 163 LEU HD22 H N N 164 LEU HD23 H N N 165 LEU HXT H N N 166 LYS N N N N 167 LYS CA C N S 168 LYS C C N N 169 LYS O O N N 170 LYS CB C N N 171 LYS CG C N N 172 LYS CD C N N 173 LYS CE C N N 174 LYS NZ N N N 175 LYS OXT O N N 176 LYS H H N N 177 LYS H2 H N N 178 LYS HA H N N 179 LYS HB2 H N N 180 LYS HB3 H N N 181 LYS HG2 H N N 182 LYS HG3 H N N 183 LYS HD2 H N N 184 LYS HD3 H N N 185 LYS HE2 H N N 186 LYS HE3 H N N 187 LYS HZ1 H N N 188 LYS HZ2 H N N 189 LYS HZ3 H N N 190 LYS HXT H N N 191 PHE N N N N 192 PHE CA C N S 193 PHE C C N N 194 PHE O O N N 195 PHE CB C N N 196 PHE CG C Y N 197 PHE CD1 C Y N 198 PHE CD2 C Y N 199 PHE CE1 C Y N 200 PHE CE2 C Y N 201 PHE CZ C Y N 202 PHE OXT O N N 203 PHE H H N N 204 PHE H2 H N N 205 PHE HA H N N 206 PHE HB2 H N N 207 PHE HB3 H N N 208 PHE HD1 H N N 209 PHE HD2 H N N 210 PHE HE1 H N N 211 PHE HE2 H N N 212 PHE HZ H N N 213 PHE HXT H N N 214 SER N N N N 215 SER CA C N S 216 SER C C N N 217 SER O O N N 218 SER CB C N N 219 SER OG O N N 220 SER OXT O N N 221 SER H H N N 222 SER H2 H N N 223 SER HA H N N 224 SER HB2 H N N 225 SER HB3 H N N 226 SER HG H N N 227 SER HXT H N N 228 THR N N N N 229 THR CA C N S 230 THR C C N N 231 THR O O N N 232 THR CB C N R 233 THR OG1 O N N 234 THR CG2 C N N 235 THR OXT O N N 236 THR H H N N 237 THR H2 H N N 238 THR HA H N N 239 THR HB H N N 240 THR HG1 H N N 241 THR HG21 H N N 242 THR HG22 H N N 243 THR HG23 H N N 244 THR HXT H N N 245 TRP N N N N 246 TRP CA C N S 247 TRP C C N N 248 TRP O O N N 249 TRP CB C N N 250 TRP CG C Y N 251 TRP CD1 C Y N 252 TRP CD2 C Y N 253 TRP NE1 N Y N 254 TRP CE2 C Y N 255 TRP CE3 C Y N 256 TRP CZ2 C Y N 257 TRP CZ3 C Y N 258 TRP CH2 C Y N 259 TRP OXT O N N 260 TRP H H N N 261 TRP H2 H N N 262 TRP HA H N N 263 TRP HB2 H N N 264 TRP HB3 H N N 265 TRP HD1 H N N 266 TRP HE1 H N N 267 TRP HE3 H N N 268 TRP HZ2 H N N 269 TRP HZ3 H N N 270 TRP HH2 H N N 271 TRP HXT H N N 272 TYR N N N N 273 TYR CA C N S 274 TYR C C N N 275 TYR O O N N 276 TYR CB C N N 277 TYR CG C Y N 278 TYR CD1 C Y N 279 TYR CD2 C Y N 280 TYR CE1 C Y N 281 TYR CE2 C Y N 282 TYR CZ C Y N 283 TYR OH O N N 284 TYR OXT O N N 285 TYR H H N N 286 TYR H2 H N N 287 TYR HA H N N 288 TYR HB2 H N N 289 TYR HB3 H N N 290 TYR HD1 H N N 291 TYR HD2 H N N 292 TYR HE1 H N N 293 TYR HE2 H N N 294 TYR HH H N N 295 TYR HXT H N N 296 VAL N N N N 297 VAL CA C N S 298 VAL C C N N 299 VAL O O N N 300 VAL CB C N N 301 VAL CG1 C N N 302 VAL CG2 C N N 303 VAL OXT O N N 304 VAL H H N N 305 VAL H2 H N N 306 VAL HA H N N 307 VAL HB H N N 308 VAL HG11 H N N 309 VAL HG12 H N N 310 VAL HG13 H N N 311 VAL HG21 H N N 312 VAL HG22 H N N 313 VAL HG23 H N N 314 VAL HXT H N N 315 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 ILE N CA sing N N 116 ILE N H sing N N 117 ILE N H2 sing N N 118 ILE CA C sing N N 119 ILE CA CB sing N N 120 ILE CA HA sing N N 121 ILE C O doub N N 122 ILE C OXT sing N N 123 ILE CB CG1 sing N N 124 ILE CB CG2 sing N N 125 ILE CB HB sing N N 126 ILE CG1 CD1 sing N N 127 ILE CG1 HG12 sing N N 128 ILE CG1 HG13 sing N N 129 ILE CG2 HG21 sing N N 130 ILE CG2 HG22 sing N N 131 ILE CG2 HG23 sing N N 132 ILE CD1 HD11 sing N N 133 ILE CD1 HD12 sing N N 134 ILE CD1 HD13 sing N N 135 ILE OXT HXT sing N N 136 LEU N CA sing N N 137 LEU N H sing N N 138 LEU N H2 sing N N 139 LEU CA C sing N N 140 LEU CA CB sing N N 141 LEU CA HA sing N N 142 LEU C O doub N N 143 LEU C OXT sing N N 144 LEU CB CG sing N N 145 LEU CB HB2 sing N N 146 LEU CB HB3 sing N N 147 LEU CG CD1 sing N N 148 LEU CG CD2 sing N N 149 LEU CG HG sing N N 150 LEU CD1 HD11 sing N N 151 LEU CD1 HD12 sing N N 152 LEU CD1 HD13 sing N N 153 LEU CD2 HD21 sing N N 154 LEU CD2 HD22 sing N N 155 LEU CD2 HD23 sing N N 156 LEU OXT HXT sing N N 157 LYS N CA sing N N 158 LYS N H sing N N 159 LYS N H2 sing N N 160 LYS CA C sing N N 161 LYS CA CB sing N N 162 LYS CA HA sing N N 163 LYS C O doub N N 164 LYS C OXT sing N N 165 LYS CB CG sing N N 166 LYS CB HB2 sing N N 167 LYS CB HB3 sing N N 168 LYS CG CD sing N N 169 LYS CG HG2 sing N N 170 LYS CG HG3 sing N N 171 LYS CD CE sing N N 172 LYS CD HD2 sing N N 173 LYS CD HD3 sing N N 174 LYS CE NZ sing N N 175 LYS CE HE2 sing N N 176 LYS CE HE3 sing N N 177 LYS NZ HZ1 sing N N 178 LYS NZ HZ2 sing N N 179 LYS NZ HZ3 sing N N 180 LYS OXT HXT sing N N 181 PHE N CA sing N N 182 PHE N H sing N N 183 PHE N H2 sing N N 184 PHE CA C sing N N 185 PHE CA CB sing N N 186 PHE CA HA sing N N 187 PHE C O doub N N 188 PHE C OXT sing N N 189 PHE CB CG sing N N 190 PHE CB HB2 sing N N 191 PHE CB HB3 sing N N 192 PHE CG CD1 doub Y N 193 PHE CG CD2 sing Y N 194 PHE CD1 CE1 sing Y N 195 PHE CD1 HD1 sing N N 196 PHE CD2 CE2 doub Y N 197 PHE CD2 HD2 sing N N 198 PHE CE1 CZ doub Y N 199 PHE CE1 HE1 sing N N 200 PHE CE2 CZ sing Y N 201 PHE CE2 HE2 sing N N 202 PHE CZ HZ sing N N 203 PHE OXT HXT sing N N 204 SER N CA sing N N 205 SER N H sing N N 206 SER N H2 sing N N 207 SER CA C sing N N 208 SER CA CB sing N N 209 SER CA HA sing N N 210 SER C O doub N N 211 SER C OXT sing N N 212 SER CB OG sing N N 213 SER CB HB2 sing N N 214 SER CB HB3 sing N N 215 SER OG HG sing N N 216 SER OXT HXT sing N N 217 THR N CA sing N N 218 THR N H sing N N 219 THR N H2 sing N N 220 THR CA C sing N N 221 THR CA CB sing N N 222 THR CA HA sing N N 223 THR C O doub N N 224 THR C OXT sing N N 225 THR CB OG1 sing N N 226 THR CB CG2 sing N N 227 THR CB HB sing N N 228 THR OG1 HG1 sing N N 229 THR CG2 HG21 sing N N 230 THR CG2 HG22 sing N N 231 THR CG2 HG23 sing N N 232 THR OXT HXT sing N N 233 TRP N CA sing N N 234 TRP N H sing N N 235 TRP N H2 sing N N 236 TRP CA C sing N N 237 TRP CA CB sing N N 238 TRP CA HA sing N N 239 TRP C O doub N N 240 TRP C OXT sing N N 241 TRP CB CG sing N N 242 TRP CB HB2 sing N N 243 TRP CB HB3 sing N N 244 TRP CG CD1 doub Y N 245 TRP CG CD2 sing Y N 246 TRP CD1 NE1 sing Y N 247 TRP CD1 HD1 sing N N 248 TRP CD2 CE2 doub Y N 249 TRP CD2 CE3 sing Y N 250 TRP NE1 CE2 sing Y N 251 TRP NE1 HE1 sing N N 252 TRP CE2 CZ2 sing Y N 253 TRP CE3 CZ3 doub Y N 254 TRP CE3 HE3 sing N N 255 TRP CZ2 CH2 doub Y N 256 TRP CZ2 HZ2 sing N N 257 TRP CZ3 CH2 sing Y N 258 TRP CZ3 HZ3 sing N N 259 TRP CH2 HH2 sing N N 260 TRP OXT HXT sing N N 261 TYR N CA sing N N 262 TYR N H sing N N 263 TYR N H2 sing N N 264 TYR CA C sing N N 265 TYR CA CB sing N N 266 TYR CA HA sing N N 267 TYR C O doub N N 268 TYR C OXT sing N N 269 TYR CB CG sing N N 270 TYR CB HB2 sing N N 271 TYR CB HB3 sing N N 272 TYR CG CD1 doub Y N 273 TYR CG CD2 sing Y N 274 TYR CD1 CE1 sing Y N 275 TYR CD1 HD1 sing N N 276 TYR CD2 CE2 doub Y N 277 TYR CD2 HD2 sing N N 278 TYR CE1 CZ doub Y N 279 TYR CE1 HE1 sing N N 280 TYR CE2 CZ sing Y N 281 TYR CE2 HE2 sing N N 282 TYR CZ OH sing N N 283 TYR OH HH sing N N 284 TYR OXT HXT sing N N 285 VAL N CA sing N N 286 VAL N H sing N N 287 VAL N H2 sing N N 288 VAL CA C sing N N 289 VAL CA CB sing N N 290 VAL CA HA sing N N 291 VAL C O doub N N 292 VAL C OXT sing N N 293 VAL CB CG1 sing N N 294 VAL CB CG2 sing N N 295 VAL CB HB sing N N 296 VAL CG1 HG11 sing N N 297 VAL CG1 HG12 sing N N 298 VAL CG1 HG13 sing N N 299 VAL CG2 HG21 sing N N 300 VAL CG2 HG22 sing N N 301 VAL CG2 HG23 sing N N 302 VAL OXT HXT sing N N 303 # _em_admin.current_status REL _em_admin.deposition_date 2026-01-26 _em_admin.deposition_site PDBE _em_admin.entry_id 9U02 _em_admin.last_update 2026-04-08 _em_admin.map_release_date 2026-04-08 _em_admin.title 'Medin fibril generated from the heterotypic interaction of Abeta40 and Medin.' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units ? _em_entity_assembly_molwt.value ? # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 9606 _em_entity_assembly_naturalsource.organism 'Homo sapiens' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 562 _em_entity_assembly_recombinant.organism 'Escherichia coli' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_helical_entity.id 1 _em_helical_entity.image_processing_id 1 _em_helical_entity.details ? _em_helical_entity.axial_symmetry C1 _em_helical_entity.angular_rotation_per_subunit -2.008 _em_helical_entity.axial_rise_per_subunit 4.804 # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time 2.67 _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 1.313326186 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'FEI FALCON IV (4k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version _em_software.reference_DOI 'PARTICLE SELECTION' ? 1 1 ? ? cryoSPARC 4.7 ? 'IMAGE ACQUISITION' ? 2 ? ? 1 EPU ? ? MASKING ? 3 ? ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? cryoSPARC 4.7 ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? ? 'MODEL FITTING' ? 7 ? 1 ? Coot ? ? OTHER ? 8 ? ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 9 1 ? ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? ? CLASSIFICATION ? 11 1 ? ? ? ? ? RECONSTRUCTION ? 12 1 ? ? cryoSPARC 4.7.1 ? 'MODEL REFINEMENT' ? 13 ? 1 ? PHENIX 1.21.2_5419 ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Research Foundation - Flanders (FWO)' Belgium G0C3522N 1 'Research Foundation - Flanders (FWO)' Belgium 12AWB24N 2 'National Institutes of Health/National Institute on Aging (NIH/NIA)' 'United States' R01AG079234 3 # _atom_sites.entry_id 9U02 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O # loop_ #