data_9U48 # _entry.id 9U48 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.404 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9U48 pdb_00009u48 10.2210/pdb9u48/pdb WWPDB D_1300057454 ? ? EMDB EMD-63834 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2025-08-06 ? 2 'EM metadata' 1 0 2025-08-06 ? 3 FSC 1 0 2025-08-06 ? 4 'Half map' 1 0 2025-08-06 1 5 'Half map' 1 0 2025-08-06 2 6 Image 1 0 2025-08-06 ? 7 Mask 1 0 2025-08-06 1 8 'Primary map' 1 0 2025-08-06 ? 9 'Structure model' 1 1 2025-09-24 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? 3 3 FSC repository 'Initial release' ? ? 4 4 'Half map' repository 'Initial release' ? ? 5 5 'Half map' repository 'Initial release' ? ? 6 6 Image repository 'Initial release' ? ? 7 7 Mask repository 'Initial release' ? ? 8 8 'Primary map' repository 'Initial release' ? ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 9 'Structure model' 'Data collection' 2 9 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 9 'Structure model' citation 2 9 'Structure model' em_admin # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 9 'Structure model' '_citation.country' 2 9 'Structure model' '_citation.journal_abbrev' 3 9 'Structure model' '_citation.journal_id_CSD' 4 9 'Structure model' '_citation.journal_id_ISSN' 5 9 'Structure model' '_citation.journal_volume' 6 9 'Structure model' '_citation.page_first' 7 9 'Structure model' '_citation.page_last' 8 9 'Structure model' '_citation.pdbx_database_id_DOI' 9 9 'Structure model' '_citation.pdbx_database_id_PubMed' 10 9 'Structure model' '_citation.title' 11 9 'Structure model' '_citation.year' 12 9 'Structure model' '_em_admin.last_update' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9U48 _pdbx_database_status.recvd_initial_deposition_date 2025-03-19 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB 'Same citation' 9M86 unspecified EMDB 'Cryo-EM structure of SpMETTL16 in complex with U6 snRNA and SAM' EMD-63834 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email kozo-tomita@edu.k.u-tokyo.ac.jp _pdbx_contact_author.name_first Kozo _pdbx_contact_author.name_last Tomita _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-7374-3898 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Ju, J.' 1 0000-0003-3660-3375 'Tomita, K.' 2 0000-0002-7374-3898 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 16 _citation.language ? _citation.page_first 7708 _citation.page_last 7708 _citation.title 'Structures and mechanisms of U6 snRNA m 6 A modification by METTL16.' _citation.year 2025 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-025-63021-0 _citation.pdbx_database_id_PubMed 40841561 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ju, J.' 1 0000-0003-3660-3375 primary 'Tomita, K.' 2 0000-0002-7374-3898 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase' 48442.223 1 2.1.1.346 ? ? ;Residues MET A -22 to SER A 0 are expression tags. MET A 1 to PHE A 23 are part of the protein sequence, based on publication (DOI: 10.1038/s41467-021-23457-6). ; 2 polymer syn 'U6 small nuclear RNA' 31863.982 1 ? ? ? ? 3 non-polymer syn S-ADENOSYLMETHIONINE 398.437 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MGSSHHHHHHSSGLVPRGSHMASMTDKTDIINFDSLARDYPDLRSFVKNGRIDFWNEDAIRTLGKAILDRDYSLRVEFPE NRLCPMVPNRATYIRYIHDLLSSTSGQKDKKRIIGLDIGTGASCIYPLLGCRMYSYDFVGTEIDKFSFETAKSNILQNNM ESQIKIVLRSKQDCLLPDTEGMEEFTFVMCNPPFYEHEEDFINFKQNPPSGVCTGVYHEMVTEGGEVGFANKILTESKKR KGIQWYTCMFGKKSSVPAVVDKLREQNISNYGIYELALGKTKRWIICWSFQAMRPHNELIRPSSTSLSKYFPHKVLQNWT LDPELCAQIDDILQKFLDDNKIPWSKKGSVLEISTKSITWSRKARRISKSQTSVSSLEGQMKCELNVIDNQLQCKWIEGY DYNVYESFCSALARALRDNKK ; ;MGSSHHHHHHSSGLVPRGSHMASMTDKTDIINFDSLARDYPDLRSFVKNGRIDFWNEDAIRTLGKAILDRDYSLRVEFPE NRLCPMVPNRATYIRYIHDLLSSTSGQKDKKRIIGLDIGTGASCIYPLLGCRMYSYDFVGTEIDKFSFETAKSNILQNNM ESQIKIVLRSKQDCLLPDTEGMEEFTFVMCNPPFYEHEEDFINFKQNPPSGVCTGVYHEMVTEGGEVGFANKILTESKKR KGIQWYTCMFGKKSSVPAVVDKLREQNISNYGIYELALGKTKRWIICWSFQAMRPHNELIRPSSTSLSKYFPHKVLQNWT LDPELCAQIDDILQKFLDDNKIPWSKKGSVLEISTKSITWSRKARRISKSQTSVSSLEGQMKCELNVIDNQLQCKWIEGY DYNVYESFCSALARALRDNKK ; A ? 2 polyribonucleotide no no ;GAUCUUCGGAUCACUUUGGUCAAAUUGAAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCACAAGGAUGACACUGCGACA UUGAGAGAAAACCCAUUUU ; ;GAUCUUCGGAUCACUUUGGUCAAAUUGAAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCACAAGGAUGACACUGCGACA UUGAGAGAAAACCCAUUUU ; B ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name S-ADENOSYLMETHIONINE _pdbx_entity_nonpoly.comp_id SAM # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 LEU n 1 15 VAL n 1 16 PRO n 1 17 ARG n 1 18 GLY n 1 19 SER n 1 20 HIS n 1 21 MET n 1 22 ALA n 1 23 SER n 1 24 MET n 1 25 THR n 1 26 ASP n 1 27 LYS n 1 28 THR n 1 29 ASP n 1 30 ILE n 1 31 ILE n 1 32 ASN n 1 33 PHE n 1 34 ASP n 1 35 SER n 1 36 LEU n 1 37 ALA n 1 38 ARG n 1 39 ASP n 1 40 TYR n 1 41 PRO n 1 42 ASP n 1 43 LEU n 1 44 ARG n 1 45 SER n 1 46 PHE n 1 47 VAL n 1 48 LYS n 1 49 ASN n 1 50 GLY n 1 51 ARG n 1 52 ILE n 1 53 ASP n 1 54 PHE n 1 55 TRP n 1 56 ASN n 1 57 GLU n 1 58 ASP n 1 59 ALA n 1 60 ILE n 1 61 ARG n 1 62 THR n 1 63 LEU n 1 64 GLY n 1 65 LYS n 1 66 ALA n 1 67 ILE n 1 68 LEU n 1 69 ASP n 1 70 ARG n 1 71 ASP n 1 72 TYR n 1 73 SER n 1 74 LEU n 1 75 ARG n 1 76 VAL n 1 77 GLU n 1 78 PHE n 1 79 PRO n 1 80 GLU n 1 81 ASN n 1 82 ARG n 1 83 LEU n 1 84 CYS n 1 85 PRO n 1 86 MET n 1 87 VAL n 1 88 PRO n 1 89 ASN n 1 90 ARG n 1 91 ALA n 1 92 THR n 1 93 TYR n 1 94 ILE n 1 95 ARG n 1 96 TYR n 1 97 ILE n 1 98 HIS n 1 99 ASP n 1 100 LEU n 1 101 LEU n 1 102 SER n 1 103 SER n 1 104 THR n 1 105 SER n 1 106 GLY n 1 107 GLN n 1 108 LYS n 1 109 ASP n 1 110 LYS n 1 111 LYS n 1 112 ARG n 1 113 ILE n 1 114 ILE n 1 115 GLY n 1 116 LEU n 1 117 ASP n 1 118 ILE n 1 119 GLY n 1 120 THR n 1 121 GLY n 1 122 ALA n 1 123 SER n 1 124 CYS n 1 125 ILE n 1 126 TYR n 1 127 PRO n 1 128 LEU n 1 129 LEU n 1 130 GLY n 1 131 CYS n 1 132 ARG n 1 133 MET n 1 134 TYR n 1 135 SER n 1 136 TYR n 1 137 ASP n 1 138 PHE n 1 139 VAL n 1 140 GLY n 1 141 THR n 1 142 GLU n 1 143 ILE n 1 144 ASP n 1 145 LYS n 1 146 PHE n 1 147 SER n 1 148 PHE n 1 149 GLU n 1 150 THR n 1 151 ALA n 1 152 LYS n 1 153 SER n 1 154 ASN n 1 155 ILE n 1 156 LEU n 1 157 GLN n 1 158 ASN n 1 159 ASN n 1 160 MET n 1 161 GLU n 1 162 SER n 1 163 GLN n 1 164 ILE n 1 165 LYS n 1 166 ILE n 1 167 VAL n 1 168 LEU n 1 169 ARG n 1 170 SER n 1 171 LYS n 1 172 GLN n 1 173 ASP n 1 174 CYS n 1 175 LEU n 1 176 LEU n 1 177 PRO n 1 178 ASP n 1 179 THR n 1 180 GLU n 1 181 GLY n 1 182 MET n 1 183 GLU n 1 184 GLU n 1 185 PHE n 1 186 THR n 1 187 PHE n 1 188 VAL n 1 189 MET n 1 190 CYS n 1 191 ASN n 1 192 PRO n 1 193 PRO n 1 194 PHE n 1 195 TYR n 1 196 GLU n 1 197 HIS n 1 198 GLU n 1 199 GLU n 1 200 ASP n 1 201 PHE n 1 202 ILE n 1 203 ASN n 1 204 PHE n 1 205 LYS n 1 206 GLN n 1 207 ASN n 1 208 PRO n 1 209 PRO n 1 210 SER n 1 211 GLY n 1 212 VAL n 1 213 CYS n 1 214 THR n 1 215 GLY n 1 216 VAL n 1 217 TYR n 1 218 HIS n 1 219 GLU n 1 220 MET n 1 221 VAL n 1 222 THR n 1 223 GLU n 1 224 GLY n 1 225 GLY n 1 226 GLU n 1 227 VAL n 1 228 GLY n 1 229 PHE n 1 230 ALA n 1 231 ASN n 1 232 LYS n 1 233 ILE n 1 234 LEU n 1 235 THR n 1 236 GLU n 1 237 SER n 1 238 LYS n 1 239 LYS n 1 240 ARG n 1 241 LYS n 1 242 GLY n 1 243 ILE n 1 244 GLN n 1 245 TRP n 1 246 TYR n 1 247 THR n 1 248 CYS n 1 249 MET n 1 250 PHE n 1 251 GLY n 1 252 LYS n 1 253 LYS n 1 254 SER n 1 255 SER n 1 256 VAL n 1 257 PRO n 1 258 ALA n 1 259 VAL n 1 260 VAL n 1 261 ASP n 1 262 LYS n 1 263 LEU n 1 264 ARG n 1 265 GLU n 1 266 GLN n 1 267 ASN n 1 268 ILE n 1 269 SER n 1 270 ASN n 1 271 TYR n 1 272 GLY n 1 273 ILE n 1 274 TYR n 1 275 GLU n 1 276 LEU n 1 277 ALA n 1 278 LEU n 1 279 GLY n 1 280 LYS n 1 281 THR n 1 282 LYS n 1 283 ARG n 1 284 TRP n 1 285 ILE n 1 286 ILE n 1 287 CYS n 1 288 TRP n 1 289 SER n 1 290 PHE n 1 291 GLN n 1 292 ALA n 1 293 MET n 1 294 ARG n 1 295 PRO n 1 296 HIS n 1 297 ASN n 1 298 GLU n 1 299 LEU n 1 300 ILE n 1 301 ARG n 1 302 PRO n 1 303 SER n 1 304 SER n 1 305 THR n 1 306 SER n 1 307 LEU n 1 308 SER n 1 309 LYS n 1 310 TYR n 1 311 PHE n 1 312 PRO n 1 313 HIS n 1 314 LYS n 1 315 VAL n 1 316 LEU n 1 317 GLN n 1 318 ASN n 1 319 TRP n 1 320 THR n 1 321 LEU n 1 322 ASP n 1 323 PRO n 1 324 GLU n 1 325 LEU n 1 326 CYS n 1 327 ALA n 1 328 GLN n 1 329 ILE n 1 330 ASP n 1 331 ASP n 1 332 ILE n 1 333 LEU n 1 334 GLN n 1 335 LYS n 1 336 PHE n 1 337 LEU n 1 338 ASP n 1 339 ASP n 1 340 ASN n 1 341 LYS n 1 342 ILE n 1 343 PRO n 1 344 TRP n 1 345 SER n 1 346 LYS n 1 347 LYS n 1 348 GLY n 1 349 SER n 1 350 VAL n 1 351 LEU n 1 352 GLU n 1 353 ILE n 1 354 SER n 1 355 THR n 1 356 LYS n 1 357 SER n 1 358 ILE n 1 359 THR n 1 360 TRP n 1 361 SER n 1 362 ARG n 1 363 LYS n 1 364 ALA n 1 365 ARG n 1 366 ARG n 1 367 ILE n 1 368 SER n 1 369 LYS n 1 370 SER n 1 371 GLN n 1 372 THR n 1 373 SER n 1 374 VAL n 1 375 SER n 1 376 SER n 1 377 LEU n 1 378 GLU n 1 379 GLY n 1 380 GLN n 1 381 MET n 1 382 LYS n 1 383 CYS n 1 384 GLU n 1 385 LEU n 1 386 ASN n 1 387 VAL n 1 388 ILE n 1 389 ASP n 1 390 ASN n 1 391 GLN n 1 392 LEU n 1 393 GLN n 1 394 CYS n 1 395 LYS n 1 396 TRP n 1 397 ILE n 1 398 GLU n 1 399 GLY n 1 400 TYR n 1 401 ASP n 1 402 TYR n 1 403 ASN n 1 404 VAL n 1 405 TYR n 1 406 GLU n 1 407 SER n 1 408 PHE n 1 409 CYS n 1 410 SER n 1 411 ALA n 1 412 LEU n 1 413 ALA n 1 414 ARG n 1 415 ALA n 1 416 LEU n 1 417 ARG n 1 418 ASP n 1 419 ASN n 1 420 LYS n 1 421 LYS n 2 1 G n 2 2 A n 2 3 U n 2 4 C n 2 5 U n 2 6 U n 2 7 C n 2 8 G n 2 9 G n 2 10 A n 2 11 U n 2 12 C n 2 13 A n 2 14 C n 2 15 U n 2 16 U n 2 17 U n 2 18 G n 2 19 G n 2 20 U n 2 21 C n 2 22 A n 2 23 A n 2 24 A n 2 25 U n 2 26 U n 2 27 G n 2 28 A n 2 29 A n 2 30 A n 2 31 C n 2 32 G n 2 33 A n 2 34 U n 2 35 A n 2 36 C n 2 37 A n 2 38 G n 2 39 A n 2 40 G n 2 41 A n 2 42 A n 2 43 G n 2 44 A n 2 45 U n 2 46 U n 2 47 A n 2 48 G n 2 49 C n 2 50 A n 2 51 U n 2 52 G n 2 53 G n 2 54 C n 2 55 C n 2 56 C n 2 57 C n 2 58 U n 2 59 G n 2 60 C n 2 61 A n 2 62 C n 2 63 A n 2 64 A n 2 65 G n 2 66 G n 2 67 A n 2 68 U n 2 69 G n 2 70 A n 2 71 C n 2 72 A n 2 73 C n 2 74 U n 2 75 G n 2 76 C n 2 77 G n 2 78 A n 2 79 C n 2 80 A n 2 81 U n 2 82 U n 2 83 G n 2 84 A n 2 85 G n 2 86 A n 2 87 G n 2 88 A n 2 89 A n 2 90 A n 2 91 A n 2 92 C n 2 93 C n 2 94 C n 2 95 A n 2 96 U n 2 97 U n 2 98 U n 2 99 U n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 46 'fission yeast' ? SPAC27D7.08c ? ED668 ? ? ? ? 'Schizosaccharomyces pombe' 4896 ? ? ? ? ? ? ? ? 'Escherichia coli BL21(DE3)' 469008 ? ? ? ? ? ? Rosetta2 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 1 2 sample 'Biological sequence' 47 421 'fission yeast' ? SPAC27D7.08c ? ED668 ? ? ? ? 'Schizosaccharomyces pombe' 4896 ? ? ? ? ? ? ? ? 'Escherichia coli BL21(DE3)' 469008 ? ? ? ? ? ? Rosetta2 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 99 _pdbx_entity_src_syn.organism_scientific 'Schizosaccharomyces pombe' _pdbx_entity_src_syn.organism_common_name 'fission yeast' _pdbx_entity_src_syn.ncbi_taxonomy_id 4896 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SAM non-polymer . S-ADENOSYLMETHIONINE ? 'C15 H22 N6 O5 S' 398.437 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -22 ? ? ? A . n A 1 2 GLY 2 -21 ? ? ? A . n A 1 3 SER 3 -20 ? ? ? A . n A 1 4 SER 4 -19 ? ? ? A . n A 1 5 HIS 5 -18 ? ? ? A . n A 1 6 HIS 6 -17 ? ? ? A . n A 1 7 HIS 7 -16 ? ? ? A . n A 1 8 HIS 8 -15 ? ? ? A . n A 1 9 HIS 9 -14 ? ? ? A . n A 1 10 HIS 10 -13 ? ? ? A . n A 1 11 SER 11 -12 ? ? ? A . n A 1 12 SER 12 -11 ? ? ? A . n A 1 13 GLY 13 -10 ? ? ? A . n A 1 14 LEU 14 -9 ? ? ? A . n A 1 15 VAL 15 -8 ? ? ? A . n A 1 16 PRO 16 -7 ? ? ? A . n A 1 17 ARG 17 -6 ? ? ? A . n A 1 18 GLY 18 -5 ? ? ? A . n A 1 19 SER 19 -4 ? ? ? A . n A 1 20 HIS 20 -3 ? ? ? A . n A 1 21 MET 21 -2 ? ? ? A . n A 1 22 ALA 22 -1 ? ? ? A . n A 1 23 SER 23 0 ? ? ? A . n A 1 24 MET 24 1 ? ? ? A . n A 1 25 THR 25 2 ? ? ? A . n A 1 26 ASP 26 3 ? ? ? A . n A 1 27 LYS 27 4 ? ? ? A . n A 1 28 THR 28 5 ? ? ? A . n A 1 29 ASP 29 6 ? ? ? A . n A 1 30 ILE 30 7 ? ? ? A . n A 1 31 ILE 31 8 ? ? ? A . n A 1 32 ASN 32 9 ? ? ? A . n A 1 33 PHE 33 10 ? ? ? A . n A 1 34 ASP 34 11 ? ? ? A . n A 1 35 SER 35 12 ? ? ? A . n A 1 36 LEU 36 13 ? ? ? A . n A 1 37 ALA 37 14 ? ? ? A . n A 1 38 ARG 38 15 ? ? ? A . n A 1 39 ASP 39 16 ? ? ? A . n A 1 40 TYR 40 17 ? ? ? A . n A 1 41 PRO 41 18 ? ? ? A . n A 1 42 ASP 42 19 ? ? ? A . n A 1 43 LEU 43 20 ? ? ? A . n A 1 44 ARG 44 21 ? ? ? A . n A 1 45 SER 45 22 ? ? ? A . n A 1 46 PHE 46 23 ? ? ? A . n A 1 47 VAL 47 24 ? ? ? A . n A 1 48 LYS 48 25 ? ? ? A . n A 1 49 ASN 49 26 ? ? ? A . n A 1 50 GLY 50 27 ? ? ? A . n A 1 51 ARG 51 28 ? ? ? A . n A 1 52 ILE 52 29 ? ? ? A . n A 1 53 ASP 53 30 ? ? ? A . n A 1 54 PHE 54 31 ? ? ? A . n A 1 55 TRP 55 32 ? ? ? A . n A 1 56 ASN 56 33 ? ? ? A . n A 1 57 GLU 57 34 ? ? ? A . n A 1 58 ASP 58 35 ? ? ? A . n A 1 59 ALA 59 36 ? ? ? A . n A 1 60 ILE 60 37 ? ? ? A . n A 1 61 ARG 61 38 ? ? ? A . n A 1 62 THR 62 39 ? ? ? A . n A 1 63 LEU 63 40 ? ? ? A . n A 1 64 GLY 64 41 ? ? ? A . n A 1 65 LYS 65 42 ? ? ? A . n A 1 66 ALA 66 43 ? ? ? A . n A 1 67 ILE 67 44 ? ? ? A . n A 1 68 LEU 68 45 ? ? ? A . n A 1 69 ASP 69 46 ? ? ? A . n A 1 70 ARG 70 47 ? ? ? A . n A 1 71 ASP 71 48 ? ? ? A . n A 1 72 TYR 72 49 ? ? ? A . n A 1 73 SER 73 50 ? ? ? A . n A 1 74 LEU 74 51 ? ? ? A . n A 1 75 ARG 75 52 ? ? ? A . n A 1 76 VAL 76 53 ? ? ? A . n A 1 77 GLU 77 54 ? ? ? A . n A 1 78 PHE 78 55 ? ? ? A . n A 1 79 PRO 79 56 56 PRO PRO A . n A 1 80 GLU 80 57 57 GLU GLU A . n A 1 81 ASN 81 58 58 ASN ASN A . n A 1 82 ARG 82 59 59 ARG ARG A . n A 1 83 LEU 83 60 60 LEU LEU A . n A 1 84 CYS 84 61 61 CYS CYS A . n A 1 85 PRO 85 62 62 PRO PRO A . n A 1 86 MET 86 63 63 MET MET A . n A 1 87 VAL 87 64 64 VAL VAL A . n A 1 88 PRO 88 65 65 PRO PRO A . n A 1 89 ASN 89 66 66 ASN ASN A . n A 1 90 ARG 90 67 67 ARG ARG A . n A 1 91 ALA 91 68 68 ALA ALA A . n A 1 92 THR 92 69 69 THR THR A . n A 1 93 TYR 93 70 70 TYR TYR A . n A 1 94 ILE 94 71 71 ILE ILE A . n A 1 95 ARG 95 72 72 ARG ARG A . n A 1 96 TYR 96 73 73 TYR TYR A . n A 1 97 ILE 97 74 74 ILE ILE A . n A 1 98 HIS 98 75 75 HIS HIS A . n A 1 99 ASP 99 76 76 ASP ASP A . n A 1 100 LEU 100 77 77 LEU LEU A . n A 1 101 LEU 101 78 78 LEU LEU A . n A 1 102 SER 102 79 79 SER SER A . n A 1 103 SER 103 80 80 SER SER A . n A 1 104 THR 104 81 81 THR THR A . n A 1 105 SER 105 82 82 SER SER A . n A 1 106 GLY 106 83 83 GLY GLY A . n A 1 107 GLN 107 84 84 GLN GLN A . n A 1 108 LYS 108 85 85 LYS LYS A . n A 1 109 ASP 109 86 86 ASP ASP A . n A 1 110 LYS 110 87 87 LYS LYS A . n A 1 111 LYS 111 88 88 LYS LYS A . n A 1 112 ARG 112 89 89 ARG ARG A . n A 1 113 ILE 113 90 90 ILE ILE A . n A 1 114 ILE 114 91 91 ILE ILE A . n A 1 115 GLY 115 92 92 GLY GLY A . n A 1 116 LEU 116 93 93 LEU LEU A . n A 1 117 ASP 117 94 94 ASP ASP A . n A 1 118 ILE 118 95 95 ILE ILE A . n A 1 119 GLY 119 96 96 GLY GLY A . n A 1 120 THR 120 97 97 THR THR A . n A 1 121 GLY 121 98 98 GLY GLY A . n A 1 122 ALA 122 99 99 ALA ALA A . n A 1 123 SER 123 100 100 SER SER A . n A 1 124 CYS 124 101 101 CYS CYS A . n A 1 125 ILE 125 102 102 ILE ILE A . n A 1 126 TYR 126 103 103 TYR TYR A . n A 1 127 PRO 127 104 104 PRO PRO A . n A 1 128 LEU 128 105 105 LEU LEU A . n A 1 129 LEU 129 106 106 LEU LEU A . n A 1 130 GLY 130 107 107 GLY GLY A . n A 1 131 CYS 131 108 108 CYS CYS A . n A 1 132 ARG 132 109 109 ARG ARG A . n A 1 133 MET 133 110 110 MET MET A . n A 1 134 TYR 134 111 111 TYR TYR A . n A 1 135 SER 135 112 112 SER SER A . n A 1 136 TYR 136 113 113 TYR TYR A . n A 1 137 ASP 137 114 114 ASP ASP A . n A 1 138 PHE 138 115 115 PHE PHE A . n A 1 139 VAL 139 116 116 VAL VAL A . n A 1 140 GLY 140 117 117 GLY GLY A . n A 1 141 THR 141 118 118 THR THR A . n A 1 142 GLU 142 119 119 GLU GLU A . n A 1 143 ILE 143 120 120 ILE ILE A . n A 1 144 ASP 144 121 121 ASP ASP A . n A 1 145 LYS 145 122 122 LYS LYS A . n A 1 146 PHE 146 123 123 PHE PHE A . n A 1 147 SER 147 124 124 SER SER A . n A 1 148 PHE 148 125 125 PHE PHE A . n A 1 149 GLU 149 126 126 GLU GLU A . n A 1 150 THR 150 127 127 THR THR A . n A 1 151 ALA 151 128 128 ALA ALA A . n A 1 152 LYS 152 129 129 LYS LYS A . n A 1 153 SER 153 130 130 SER SER A . n A 1 154 ASN 154 131 131 ASN ASN A . n A 1 155 ILE 155 132 132 ILE ILE A . n A 1 156 LEU 156 133 133 LEU LEU A . n A 1 157 GLN 157 134 134 GLN GLN A . n A 1 158 ASN 158 135 135 ASN ASN A . n A 1 159 ASN 159 136 136 ASN ASN A . n A 1 160 MET 160 137 137 MET MET A . n A 1 161 GLU 161 138 138 GLU GLU A . n A 1 162 SER 162 139 139 SER SER A . n A 1 163 GLN 163 140 140 GLN GLN A . n A 1 164 ILE 164 141 141 ILE ILE A . n A 1 165 LYS 165 142 142 LYS LYS A . n A 1 166 ILE 166 143 143 ILE ILE A . n A 1 167 VAL 167 144 144 VAL VAL A . n A 1 168 LEU 168 145 145 LEU LEU A . n A 1 169 ARG 169 146 146 ARG ARG A . n A 1 170 SER 170 147 147 SER SER A . n A 1 171 LYS 171 148 148 LYS LYS A . n A 1 172 GLN 172 149 149 GLN GLN A . n A 1 173 ASP 173 150 150 ASP ASP A . n A 1 174 CYS 174 151 151 CYS CYS A . n A 1 175 LEU 175 152 152 LEU LEU A . n A 1 176 LEU 176 153 153 LEU LEU A . n A 1 177 PRO 177 154 154 PRO PRO A . n A 1 178 ASP 178 155 155 ASP ASP A . n A 1 179 THR 179 156 156 THR THR A . n A 1 180 GLU 180 157 157 GLU GLU A . n A 1 181 GLY 181 158 158 GLY GLY A . n A 1 182 MET 182 159 159 MET MET A . n A 1 183 GLU 183 160 160 GLU GLU A . n A 1 184 GLU 184 161 161 GLU GLU A . n A 1 185 PHE 185 162 162 PHE PHE A . n A 1 186 THR 186 163 163 THR THR A . n A 1 187 PHE 187 164 164 PHE PHE A . n A 1 188 VAL 188 165 165 VAL VAL A . n A 1 189 MET 189 166 166 MET MET A . n A 1 190 CYS 190 167 167 CYS CYS A . n A 1 191 ASN 191 168 168 ASN ASN A . n A 1 192 PRO 192 169 169 PRO PRO A . n A 1 193 PRO 193 170 170 PRO PRO A . n A 1 194 PHE 194 171 171 PHE PHE A . n A 1 195 TYR 195 172 172 TYR TYR A . n A 1 196 GLU 196 173 173 GLU GLU A . n A 1 197 HIS 197 174 174 HIS HIS A . n A 1 198 GLU 198 175 175 GLU GLU A . n A 1 199 GLU 199 176 176 GLU GLU A . n A 1 200 ASP 200 177 177 ASP ASP A . n A 1 201 PHE 201 178 178 PHE PHE A . n A 1 202 ILE 202 179 179 ILE ILE A . n A 1 203 ASN 203 180 180 ASN ASN A . n A 1 204 PHE 204 181 181 PHE PHE A . n A 1 205 LYS 205 182 182 LYS LYS A . n A 1 206 GLN 206 183 183 GLN GLN A . n A 1 207 ASN 207 184 184 ASN ASN A . n A 1 208 PRO 208 185 185 PRO PRO A . n A 1 209 PRO 209 186 186 PRO PRO A . n A 1 210 SER 210 187 ? ? ? A . n A 1 211 GLY 211 188 ? ? ? A . n A 1 212 VAL 212 189 ? ? ? A . n A 1 213 CYS 213 190 ? ? ? A . n A 1 214 THR 214 191 ? ? ? A . n A 1 215 GLY 215 192 ? ? ? A . n A 1 216 VAL 216 193 ? ? ? A . n A 1 217 TYR 217 194 ? ? ? A . n A 1 218 HIS 218 195 195 HIS HIS A . n A 1 219 GLU 219 196 196 GLU GLU A . n A 1 220 MET 220 197 197 MET MET A . n A 1 221 VAL 221 198 198 VAL VAL A . n A 1 222 THR 222 199 199 THR THR A . n A 1 223 GLU 223 200 200 GLU GLU A . n A 1 224 GLY 224 201 201 GLY GLY A . n A 1 225 GLY 225 202 202 GLY GLY A . n A 1 226 GLU 226 203 203 GLU GLU A . n A 1 227 VAL 227 204 204 VAL VAL A . n A 1 228 GLY 228 205 205 GLY GLY A . n A 1 229 PHE 229 206 206 PHE PHE A . n A 1 230 ALA 230 207 207 ALA ALA A . n A 1 231 ASN 231 208 208 ASN ASN A . n A 1 232 LYS 232 209 209 LYS LYS A . n A 1 233 ILE 233 210 210 ILE ILE A . n A 1 234 LEU 234 211 211 LEU LEU A . n A 1 235 THR 235 212 212 THR THR A . n A 1 236 GLU 236 213 213 GLU GLU A . n A 1 237 SER 237 214 214 SER SER A . n A 1 238 LYS 238 215 215 LYS LYS A . n A 1 239 LYS 239 216 216 LYS LYS A . n A 1 240 ARG 240 217 217 ARG ARG A . n A 1 241 LYS 241 218 218 LYS LYS A . n A 1 242 GLY 242 219 219 GLY GLY A . n A 1 243 ILE 243 220 220 ILE ILE A . n A 1 244 GLN 244 221 221 GLN GLN A . n A 1 245 TRP 245 222 222 TRP TRP A . n A 1 246 TYR 246 223 223 TYR TYR A . n A 1 247 THR 247 224 224 THR THR A . n A 1 248 CYS 248 225 225 CYS CYS A . n A 1 249 MET 249 226 226 MET MET A . n A 1 250 PHE 250 227 227 PHE PHE A . n A 1 251 GLY 251 228 228 GLY GLY A . n A 1 252 LYS 252 229 229 LYS LYS A . n A 1 253 LYS 253 230 230 LYS LYS A . n A 1 254 SER 254 231 231 SER SER A . n A 1 255 SER 255 232 232 SER SER A . n A 1 256 VAL 256 233 233 VAL VAL A . n A 1 257 PRO 257 234 234 PRO PRO A . n A 1 258 ALA 258 235 235 ALA ALA A . n A 1 259 VAL 259 236 236 VAL VAL A . n A 1 260 VAL 260 237 237 VAL VAL A . n A 1 261 ASP 261 238 238 ASP ASP A . n A 1 262 LYS 262 239 239 LYS LYS A . n A 1 263 LEU 263 240 240 LEU LEU A . n A 1 264 ARG 264 241 241 ARG ARG A . n A 1 265 GLU 265 242 242 GLU GLU A . n A 1 266 GLN 266 243 243 GLN GLN A . n A 1 267 ASN 267 244 244 ASN ASN A . n A 1 268 ILE 268 245 245 ILE ILE A . n A 1 269 SER 269 246 246 SER SER A . n A 1 270 ASN 270 247 247 ASN ASN A . n A 1 271 TYR 271 248 248 TYR TYR A . n A 1 272 GLY 272 249 249 GLY GLY A . n A 1 273 ILE 273 250 250 ILE ILE A . n A 1 274 TYR 274 251 251 TYR TYR A . n A 1 275 GLU 275 252 252 GLU GLU A . n A 1 276 LEU 276 253 253 LEU LEU A . n A 1 277 ALA 277 254 254 ALA ALA A . n A 1 278 LEU 278 255 255 LEU LEU A . n A 1 279 GLY 279 256 256 GLY GLY A . n A 1 280 LYS 280 257 257 LYS LYS A . n A 1 281 THR 281 258 258 THR THR A . n A 1 282 LYS 282 259 259 LYS LYS A . n A 1 283 ARG 283 260 260 ARG ARG A . n A 1 284 TRP 284 261 261 TRP TRP A . n A 1 285 ILE 285 262 262 ILE ILE A . n A 1 286 ILE 286 263 263 ILE ILE A . n A 1 287 CYS 287 264 264 CYS CYS A . n A 1 288 TRP 288 265 265 TRP TRP A . n A 1 289 SER 289 266 266 SER SER A . n A 1 290 PHE 290 267 267 PHE PHE A . n A 1 291 GLN 291 268 268 GLN GLN A . n A 1 292 ALA 292 269 269 ALA ALA A . n A 1 293 MET 293 270 270 MET MET A . n A 1 294 ARG 294 271 271 ARG ARG A . n A 1 295 PRO 295 272 272 PRO PRO A . n A 1 296 HIS 296 273 273 HIS HIS A . n A 1 297 ASN 297 274 274 ASN ASN A . n A 1 298 GLU 298 275 275 GLU GLU A . n A 1 299 LEU 299 276 276 LEU LEU A . n A 1 300 ILE 300 277 277 ILE ILE A . n A 1 301 ARG 301 278 278 ARG ARG A . n A 1 302 PRO 302 279 279 PRO PRO A . n A 1 303 SER 303 280 280 SER SER A . n A 1 304 SER 304 281 281 SER SER A . n A 1 305 THR 305 282 282 THR THR A . n A 1 306 SER 306 283 283 SER SER A . n A 1 307 LEU 307 284 284 LEU LEU A . n A 1 308 SER 308 285 285 SER SER A . n A 1 309 LYS 309 286 286 LYS LYS A . n A 1 310 TYR 310 287 287 TYR TYR A . n A 1 311 PHE 311 288 288 PHE PHE A . n A 1 312 PRO 312 289 289 PRO PRO A . n A 1 313 HIS 313 290 290 HIS HIS A . n A 1 314 LYS 314 291 291 LYS LYS A . n A 1 315 VAL 315 292 292 VAL VAL A . n A 1 316 LEU 316 293 293 LEU LEU A . n A 1 317 GLN 317 294 294 GLN GLN A . n A 1 318 ASN 318 295 295 ASN ASN A . n A 1 319 TRP 319 296 296 TRP TRP A . n A 1 320 THR 320 297 297 THR THR A . n A 1 321 LEU 321 298 298 LEU LEU A . n A 1 322 ASP 322 299 299 ASP ASP A . n A 1 323 PRO 323 300 300 PRO PRO A . n A 1 324 GLU 324 301 301 GLU GLU A . n A 1 325 LEU 325 302 302 LEU LEU A . n A 1 326 CYS 326 303 303 CYS CYS A . n A 1 327 ALA 327 304 304 ALA ALA A . n A 1 328 GLN 328 305 305 GLN GLN A . n A 1 329 ILE 329 306 306 ILE ILE A . n A 1 330 ASP 330 307 307 ASP ASP A . n A 1 331 ASP 331 308 308 ASP ASP A . n A 1 332 ILE 332 309 309 ILE ILE A . n A 1 333 LEU 333 310 310 LEU LEU A . n A 1 334 GLN 334 311 311 GLN GLN A . n A 1 335 LYS 335 312 312 LYS LYS A . n A 1 336 PHE 336 313 313 PHE PHE A . n A 1 337 LEU 337 314 314 LEU LEU A . n A 1 338 ASP 338 315 315 ASP ASP A . n A 1 339 ASP 339 316 316 ASP ASP A . n A 1 340 ASN 340 317 317 ASN ASN A . n A 1 341 LYS 341 318 318 LYS LYS A . n A 1 342 ILE 342 319 319 ILE ILE A . n A 1 343 PRO 343 320 320 PRO PRO A . n A 1 344 TRP 344 321 321 TRP TRP A . n A 1 345 SER 345 322 322 SER SER A . n A 1 346 LYS 346 323 323 LYS LYS A . n A 1 347 LYS 347 324 324 LYS LYS A . n A 1 348 GLY 348 325 325 GLY GLY A . n A 1 349 SER 349 326 326 SER SER A . n A 1 350 VAL 350 327 327 VAL VAL A . n A 1 351 LEU 351 328 328 LEU LEU A . n A 1 352 GLU 352 329 329 GLU GLU A . n A 1 353 ILE 353 330 330 ILE ILE A . n A 1 354 SER 354 331 331 SER SER A . n A 1 355 THR 355 332 332 THR THR A . n A 1 356 LYS 356 333 333 LYS LYS A . n A 1 357 SER 357 334 334 SER SER A . n A 1 358 ILE 358 335 335 ILE ILE A . n A 1 359 THR 359 336 336 THR THR A . n A 1 360 TRP 360 337 337 TRP TRP A . n A 1 361 SER 361 338 338 SER SER A . n A 1 362 ARG 362 339 339 ARG ARG A . n A 1 363 LYS 363 340 340 LYS LYS A . n A 1 364 ALA 364 341 341 ALA ALA A . n A 1 365 ARG 365 342 342 ARG ARG A . n A 1 366 ARG 366 343 343 ARG ARG A . n A 1 367 ILE 367 344 344 ILE ILE A . n A 1 368 SER 368 345 345 SER SER A . n A 1 369 LYS 369 346 346 LYS LYS A . n A 1 370 SER 370 347 347 SER SER A . n A 1 371 GLN 371 348 348 GLN GLN A . n A 1 372 THR 372 349 349 THR THR A . n A 1 373 SER 373 350 350 SER SER A . n A 1 374 VAL 374 351 351 VAL VAL A . n A 1 375 SER 375 352 352 SER SER A . n A 1 376 SER 376 353 353 SER SER A . n A 1 377 LEU 377 354 354 LEU LEU A . n A 1 378 GLU 378 355 355 GLU GLU A . n A 1 379 GLY 379 356 356 GLY GLY A . n A 1 380 GLN 380 357 357 GLN GLN A . n A 1 381 MET 381 358 358 MET MET A . n A 1 382 LYS 382 359 359 LYS LYS A . n A 1 383 CYS 383 360 360 CYS CYS A . n A 1 384 GLU 384 361 361 GLU GLU A . n A 1 385 LEU 385 362 362 LEU LEU A . n A 1 386 ASN 386 363 363 ASN ASN A . n A 1 387 VAL 387 364 364 VAL VAL A . n A 1 388 ILE 388 365 365 ILE ILE A . n A 1 389 ASP 389 366 366 ASP ASP A . n A 1 390 ASN 390 367 367 ASN ASN A . n A 1 391 GLN 391 368 368 GLN GLN A . n A 1 392 LEU 392 369 369 LEU LEU A . n A 1 393 GLN 393 370 370 GLN GLN A . n A 1 394 CYS 394 371 371 CYS CYS A . n A 1 395 LYS 395 372 372 LYS LYS A . n A 1 396 TRP 396 373 373 TRP TRP A . n A 1 397 ILE 397 374 374 ILE ILE A . n A 1 398 GLU 398 375 375 GLU GLU A . n A 1 399 GLY 399 376 376 GLY GLY A . n A 1 400 TYR 400 377 377 TYR TYR A . n A 1 401 ASP 401 378 378 ASP ASP A . n A 1 402 TYR 402 379 379 TYR TYR A . n A 1 403 ASN 403 380 380 ASN ASN A . n A 1 404 VAL 404 381 381 VAL VAL A . n A 1 405 TYR 405 382 382 TYR TYR A . n A 1 406 GLU 406 383 383 GLU GLU A . n A 1 407 SER 407 384 384 SER SER A . n A 1 408 PHE 408 385 385 PHE PHE A . n A 1 409 CYS 409 386 386 CYS CYS A . n A 1 410 SER 410 387 387 SER SER A . n A 1 411 ALA 411 388 388 ALA ALA A . n A 1 412 LEU 412 389 389 LEU LEU A . n A 1 413 ALA 413 390 390 ALA ALA A . n A 1 414 ARG 414 391 391 ARG ARG A . n A 1 415 ALA 415 392 392 ALA ALA A . n A 1 416 LEU 416 393 393 LEU LEU A . n A 1 417 ARG 417 394 394 ARG ARG A . n A 1 418 ASP 418 395 395 ASP ASP A . n A 1 419 ASN 419 396 396 ASN ASN A . n A 1 420 LYS 420 397 397 LYS LYS A . n A 1 421 LYS 421 398 398 LYS LYS A . n B 2 1 G 1 1 ? ? ? B . n B 2 2 A 2 2 ? ? ? B . n B 2 3 U 3 3 ? ? ? B . n B 2 4 C 4 4 ? ? ? B . n B 2 5 U 5 5 ? ? ? B . n B 2 6 U 6 6 ? ? ? B . n B 2 7 C 7 7 ? ? ? B . n B 2 8 G 8 8 ? ? ? B . n B 2 9 G 9 9 ? ? ? B . n B 2 10 A 10 10 ? ? ? B . n B 2 11 U 11 11 ? ? ? B . n B 2 12 C 12 12 ? ? ? B . n B 2 13 A 13 13 ? ? ? B . n B 2 14 C 14 14 ? ? ? B . n B 2 15 U 15 15 ? ? ? B . n B 2 16 U 16 16 ? ? ? B . n B 2 17 U 17 17 ? ? ? B . n B 2 18 G 18 18 ? ? ? B . n B 2 19 G 19 19 ? ? ? B . n B 2 20 U 20 20 ? ? ? B . n B 2 21 C 21 21 ? ? ? B . n B 2 22 A 22 22 ? ? ? B . n B 2 23 A 23 23 ? ? ? B . n B 2 24 A 24 24 ? ? ? B . n B 2 25 U 25 25 ? ? ? B . n B 2 26 U 26 26 ? ? ? B . n B 2 27 G 27 27 ? ? ? B . n B 2 28 A 28 28 ? ? ? B . n B 2 29 A 29 29 ? ? ? B . n B 2 30 A 30 30 ? ? ? B . n B 2 31 C 31 31 ? ? ? B . n B 2 32 G 32 32 ? ? ? B . n B 2 33 A 33 33 ? ? ? B . n B 2 34 U 34 34 ? ? ? B . n B 2 35 A 35 35 35 A A B . n B 2 36 C 36 36 36 C C B . n B 2 37 A 37 37 37 A A B . n B 2 38 G 38 38 38 G G B . n B 2 39 A 39 39 39 A A B . n B 2 40 G 40 40 40 G G B . n B 2 41 A 41 41 41 A A B . n B 2 42 A 42 42 42 A A B . n B 2 43 G 43 43 43 G G B . n B 2 44 A 44 44 44 A A B . n B 2 45 U 45 45 45 U U B . n B 2 46 U 46 46 46 U U B . n B 2 47 A 47 47 47 A A B . n B 2 48 G 48 48 48 G G B . n B 2 49 C 49 49 49 C C B . n B 2 50 A 50 50 50 A A B . n B 2 51 U 51 51 51 U U B . n B 2 52 G 52 52 52 G G B . n B 2 53 G 53 53 53 G G B . n B 2 54 C 54 54 54 C C B . n B 2 55 C 55 55 55 C C B . n B 2 56 C 56 56 56 C C B . n B 2 57 C 57 57 57 C C B . n B 2 58 U 58 58 58 U U B . n B 2 59 G 59 59 59 G G B . n B 2 60 C 60 60 60 C C B . n B 2 61 A 61 61 61 A A B . n B 2 62 C 62 62 62 C C B . n B 2 63 A 63 63 63 A A B . n B 2 64 A 64 64 64 A A B . n B 2 65 G 65 65 65 G G B . n B 2 66 G 66 66 66 G G B . n B 2 67 A 67 67 67 A A B . n B 2 68 U 68 68 68 U U B . n B 2 69 G 69 69 69 G G B . n B 2 70 A 70 70 70 A A B . n B 2 71 C 71 71 71 C C B . n B 2 72 A 72 72 72 A A B . n B 2 73 C 73 73 73 C C B . n B 2 74 U 74 74 74 U U B . n B 2 75 G 75 75 75 G G B . n B 2 76 C 76 76 76 C C B . n B 2 77 G 77 77 77 G G B . n B 2 78 A 78 78 78 A A B . n B 2 79 C 79 79 79 C C B . n B 2 80 A 80 80 80 A A B . n B 2 81 U 81 81 81 U U B . n B 2 82 U 82 82 82 U U B . n B 2 83 G 83 83 83 G G B . n B 2 84 A 84 84 ? ? ? B . n B 2 85 G 85 85 ? ? ? B . n B 2 86 A 86 86 ? ? ? B . n B 2 87 G 87 87 ? ? ? B . n B 2 88 A 88 88 ? ? ? B . n B 2 89 A 89 89 ? ? ? B . n B 2 90 A 90 90 ? ? ? B . n B 2 91 A 91 91 ? ? ? B . n B 2 92 C 92 92 ? ? ? B . n B 2 93 C 93 93 ? ? ? B . n B 2 94 C 94 94 ? ? ? B . n B 2 95 A 95 95 ? ? ? B . n B 2 96 U 96 96 ? ? ? B . n B 2 97 U 97 97 ? ? ? B . n B 2 98 U 98 98 ? ? ? B . n B 2 99 U 99 99 ? ? ? B . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id SAM _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id SAM _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_nonpoly_scheme.asym_id C _pdbx_nonpoly_scheme.entity_id 3 _pdbx_nonpoly_scheme.mon_id SAM _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 401 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id SAM _pdbx_nonpoly_scheme.auth_mon_id SAM _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9U48 _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9U48 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9U48 _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 72.78 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9U48 _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high . _refine.ls_d_res_low ? _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work ? _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method NONE _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_Zscore _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.0075 ? 3977 ? f_bond_d ? ? ? 'ELECTRON MICROSCOPY' ? 0.8112 ? 5609 ? f_angle_d ? ? ? 'ELECTRON MICROSCOPY' ? 0.0884 ? 652 ? f_chiral_restr ? ? ? 'ELECTRON MICROSCOPY' ? 0.0046 ? 527 ? f_plane_restr ? ? ? 'ELECTRON MICROSCOPY' ? 19.4669 ? 1655 ? f_dihedral_angle_d ? ? ? # _struct.entry_id 9U48 _struct.title 'Cryo-EM structure of spMETTL16 in complex with U6 snRNA and SAM' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9U48 _struct_keywords.text 'm6A methyltransferase, U6 snRNA, protein-RNA complex, splicing, TRANSFERASE, TRANSFERASE-RNA complex' _struct_keywords.pdbx_keywords TRANSFERASE/RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 9U48 9U48 ? 1 ? 1 2 UNP MTL16_SCHPO O42662 ? 1 ;VKNGRIDFWNEDAIRTLGKAILDRDYSLRVEFPENRLCPMVPNRATYIRYIHDLLSSTSGQKDKKRIIGLDIGTGASCIY PLLGCRMYSYDFVGTEIDKFSFETAKSNILQNNMESQIKIVLRSKQDCLLPDTEGMEEFTFVMCNPPFYEHEEDFINFKQ NPPSGVCTGVYHEMVTEGGEVGFANKILTESKKRKGIQWYTCMFGKKSSVPAVVDKLREQNISNYGIYELALGKTKRWII CWSFQAMRPHNELIRPSSTSLSKYFPHKVLQNWTLDPELCAQIDDILQKFLDDNKIPWSKKGSVLEISTKSITWSRKARR ISKSQTSVSSLEGQMKCELNVIDNQLQCKWIEGYDYNVYESFCSALARALRDNKK ; 11 3 GB 3JB9_N 929984519 ? 2 ;AUCUUCGGAUCACUUUGGUCAAAUUGAAACGAUACAGAGAAGAUUAGCAUGGCCCCUGCACAAGGAUGACACUGCGACAU UGAGAGAAAACCCAUUUU ; 2 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9U48 A 1 ? 46 ? 9U48 -22 ? 23 ? -22 23 2 2 9U48 A 47 ? 421 ? O42662 11 ? 385 ? 24 398 3 3 9U48 B 2 ? 99 ? 929984519 2 ? 99 ? 2 99 # _struct_ref_seq_dif.align_id 3 _struct_ref_seq_dif.pdbx_pdb_id_code 9U48 _struct_ref_seq_dif.mon_id G _struct_ref_seq_dif.pdbx_pdb_strand_id B _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name GB _struct_ref_seq_dif.pdbx_seq_db_accession_code 929984519 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 1 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 88 ? SER A 102 ? PRO A 65 SER A 79 1 ? 15 HELX_P HELX_P2 2 ILE A 125 ? TYR A 134 ? ILE A 102 TYR A 111 1 ? 10 HELX_P HELX_P3 3 PHE A 146 ? ASN A 158 ? PHE A 123 ASN A 135 1 ? 13 HELX_P HELX_P4 4 GLU A 198 ? PHE A 204 ? GLU A 175 PHE A 181 1 ? 7 HELX_P HELX_P5 5 GLY A 225 ? LYS A 238 ? GLY A 202 LYS A 215 1 ? 14 HELX_P HELX_P6 6 LYS A 253 ? GLN A 266 ? LYS A 230 GLN A 243 1 ? 14 HELX_P HELX_P7 7 ASN A 297 ? ILE A 300 ? ASN A 274 ILE A 277 1 ? 4 HELX_P HELX_P8 8 SER A 308 ? TYR A 310 ? SER A 285 TYR A 287 1 ? 3 HELX_P HELX_P9 9 PRO A 323 ? ASN A 340 ? PRO A 300 ASN A 317 1 ? 18 HELX_P HELX_P10 10 ARG A 362 ? LYS A 369 ? ARG A 339 LYS A 346 1 ? 8 HELX_P HELX_P11 11 TYR A 402 ? LYS A 420 ? TYR A 379 LYS A 397 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? B A 41 N7 ? ? ? 1_555 B G 83 N2 ? ? B A 41 B G 83 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog2 hydrog ? ? B G 43 O6 ? ? ? 1_555 B U 82 N3 ? ? B G 43 B U 82 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog3 hydrog ? ? B A 44 N1 ? ? ? 1_555 B U 81 N3 ? ? B A 44 B U 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B A 44 N6 ? ? ? 1_555 B U 81 O4 ? ? B A 44 B U 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B U 45 N3 ? ? ? 1_555 B A 80 N1 ? ? B U 45 B A 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B U 45 O4 ? ? ? 1_555 B A 80 N6 ? ? B U 45 B A 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B U 46 O2 ? ? ? 1_555 B C 79 N4 ? ? B U 46 B C 79 1_555 ? ? ? ? ? ? 'U-C MISPAIR' ? ? ? hydrog8 hydrog ? ? B A 47 N6 ? ? ? 1_555 B G 77 N3 ? ? B A 47 B G 77 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog9 hydrog ? ? B A 47 N7 ? ? ? 1_555 B G 77 N2 ? ? B A 47 B G 77 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog10 hydrog ? ? B G 48 N1 ? ? ? 1_555 B C 76 N3 ? ? B G 48 B C 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B G 48 N2 ? ? ? 1_555 B C 76 O2 ? ? B G 48 B C 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B G 48 O6 ? ? ? 1_555 B C 76 N4 ? ? B G 48 B C 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B C 49 N3 ? ? ? 1_555 B G 75 N1 ? ? B C 49 B G 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B C 49 N4 ? ? ? 1_555 B G 75 O6 ? ? B C 49 B G 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B C 49 O2 ? ? ? 1_555 B G 75 N2 ? ? B C 49 B G 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B A 50 N1 ? ? ? 1_555 B U 74 N3 ? ? B A 50 B U 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B A 50 N6 ? ? ? 1_555 B U 74 O4 ? ? B A 50 B U 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B U 51 N3 ? ? ? 1_555 B A 72 N1 ? ? B U 51 B A 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B U 51 O4 ? ? ? 1_555 B A 72 N6 ? ? B U 51 B A 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B G 52 N1 ? ? ? 1_555 B C 71 N3 ? ? B G 52 B C 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B G 52 N2 ? ? ? 1_555 B C 71 O2 ? ? B G 52 B C 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B G 52 O6 ? ? ? 1_555 B C 71 N4 ? ? B G 52 B C 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B G 53 N1 ? ? ? 1_555 B A 70 N1 ? ? B G 53 B A 70 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog24 hydrog ? ? B G 53 O6 ? ? ? 1_555 B A 70 N6 ? ? B G 53 B A 70 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog25 hydrog ? ? B C 54 N3 ? ? ? 1_555 B G 69 N1 ? ? B C 54 B G 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B C 54 N4 ? ? ? 1_555 B G 69 O6 ? ? B C 54 B G 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B C 54 O2 ? ? ? 1_555 B G 69 N2 ? ? B C 54 B G 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B C 55 N4 ? ? ? 1_555 B A 67 N1 ? ? B C 55 B A 67 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog29 hydrog ? ? B C 56 N3 ? ? ? 1_555 B G 66 N1 ? ? B C 56 B G 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B C 56 N4 ? ? ? 1_555 B G 66 O6 ? ? B C 56 B G 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B C 56 O2 ? ? ? 1_555 B G 66 N2 ? ? B C 56 B G 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B C 57 N3 ? ? ? 1_555 B G 65 N1 ? ? B C 57 B G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B C 57 N4 ? ? ? 1_555 B G 65 O6 ? ? B C 57 B G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? B C 57 O2 ? ? ? 1_555 B G 65 N2 ? ? B C 57 B G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? B U 58 N3 ? ? ? 1_555 B A 64 N1 ? ? B U 58 B A 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? B U 58 O4 ? ? ? 1_555 B A 64 N6 ? ? B U 58 B A 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? B G 59 N2 ? ? ? 1_555 B A 63 N7 ? ? B G 59 B A 63 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog38 hydrog ? ? B G 59 N3 ? ? ? 1_555 B A 63 N6 ? ? B G 59 B A 63 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details 1 ? 1 ? 2 ? 1 ? 3 ? 1 ? 4 ? 1 ? 5 ? 1 ? 6 ? 1 ? 7 ? 1 ? 8 ? 1 ? 9 ? 1 ? 10 ? 1 ? 11 ? 1 ? 12 ? 1 ? # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id 1 1 ILE A 114 ? ILE A 118 ? ILE A 91 ILE A 95 2 1 ASP A 137 ? GLU A 142 ? ASP A 114 GLU A 119 3 1 ILE A 164 ? LEU A 168 ? ILE A 141 LEU A 145 4 1 PHE A 187 ? CYS A 190 ? PHE A 164 CYS A 167 5 1 TRP A 245 ? PHE A 250 ? TRP A 222 PHE A 227 6 1 ASN A 270 ? LEU A 278 ? ASN A 247 LEU A 255 7 1 THR A 281 ? SER A 289 ? THR A 258 SER A 266 8 1 LEU A 316 ? THR A 320 ? LEU A 293 THR A 297 9 1 TRP A 344 ? LYS A 346 ? TRP A 321 LYS A 323 10 1 LEU A 351 ? THR A 355 ? LEU A 328 THR A 332 11 1 MET A 381 ? ILE A 388 ? MET A 358 ILE A 365 12 1 GLN A 391 ? GLY A 399 ? GLN A 368 GLY A 376 # _pdbx_entry_details.entry_id 9U48 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 60 ? ? 51.23 17.89 2 1 MET A 159 ? ? -79.89 -169.10 3 1 ASN A 168 ? ? -153.17 80.60 4 1 GLN A 183 ? ? -102.79 66.52 5 1 LEU A 284 ? ? -99.38 37.23 6 1 SER A 334 ? ? -172.25 139.87 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9U48 _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # loop_ _em_3d_fitting_list.id _em_3d_fitting_list.3d_fitting_id _em_3d_fitting_list.pdb_entry_id _em_3d_fitting_list.pdb_chain_id _em_3d_fitting_list.pdb_chain_residue_range _em_3d_fitting_list.details _em_3d_fitting_list.chain_id _em_3d_fitting_list.chain_residue_range _em_3d_fitting_list.source_name _em_3d_fitting_list.type _em_3d_fitting_list.accession_code _em_3d_fitting_list.initial_refinement_model_id 1 1 . . . ? ? ? AlphaFold 'in silico model' ? ? 2 1 . . . ? ? ? ? ? ? ? # _em_3d_reconstruction.entry_id 9U48 _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 2.99 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 425927 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.0 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source 'MULTIPLE SOURCES' _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'Schizosaccharomyces pombe N6-methyladenosine methyltransferase METTL16 in complex with U6 snRNA and SAM' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list '1, 2' # _em_image_scans.entry_id 9U48 _em_image_scans.id 1 _em_image_scans.number_digital_images ? _em_image_scans.details ? _em_image_scans.scanner_model ? _em_image_scans.sampling_size ? _em_image_scans.od_range ? _em_image_scans.quant_bit_size ? _em_image_scans.citation_id ? _em_image_scans.dimension_height 5760 _em_image_scans.dimension_width 4092 _em_image_scans.frames_per_image ? _em_image_scans.image_recording_id 1 _em_image_scans.used_frames_per_image ? # _em_imaging.entry_id 9U48 _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 2.7 _em_imaging.nominal_defocus_min 800 _em_imaging.nominal_defocus_max 1800 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification 105000 _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen NITROGEN _em_imaging.objective_aperture ? _em_imaging.microscope_serial_number ? _em_imaging.microscope_version ? # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material GOLD _em_sample_support.grid_mesh_size 300 _em_sample_support.grid_type 'UltrAuFoil R1.2/1.3' _em_sample_support.details ? _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 9U48 _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity 100 _em_vitrification.temp ? _em_vitrification.chamber_temperature 277 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 9U48 _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 9U48 _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry C1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -22 ? A MET 1 2 1 Y 1 A GLY -21 ? A GLY 2 3 1 Y 1 A SER -20 ? A SER 3 4 1 Y 1 A SER -19 ? A SER 4 5 1 Y 1 A HIS -18 ? A HIS 5 6 1 Y 1 A HIS -17 ? A HIS 6 7 1 Y 1 A HIS -16 ? A HIS 7 8 1 Y 1 A HIS -15 ? A HIS 8 9 1 Y 1 A HIS -14 ? A HIS 9 10 1 Y 1 A HIS -13 ? A HIS 10 11 1 Y 1 A SER -12 ? A SER 11 12 1 Y 1 A SER -11 ? A SER 12 13 1 Y 1 A GLY -10 ? A GLY 13 14 1 Y 1 A LEU -9 ? A LEU 14 15 1 Y 1 A VAL -8 ? A VAL 15 16 1 Y 1 A PRO -7 ? A PRO 16 17 1 Y 1 A ARG -6 ? A ARG 17 18 1 Y 1 A GLY -5 ? A GLY 18 19 1 Y 1 A SER -4 ? A SER 19 20 1 Y 1 A HIS -3 ? A HIS 20 21 1 Y 1 A MET -2 ? A MET 21 22 1 Y 1 A ALA -1 ? A ALA 22 23 1 Y 1 A SER 0 ? A SER 23 24 1 Y 1 A MET 1 ? A MET 24 25 1 Y 1 A THR 2 ? A THR 25 26 1 Y 1 A ASP 3 ? A ASP 26 27 1 Y 1 A LYS 4 ? A LYS 27 28 1 Y 1 A THR 5 ? A THR 28 29 1 Y 1 A ASP 6 ? A ASP 29 30 1 Y 1 A ILE 7 ? A ILE 30 31 1 Y 1 A ILE 8 ? A ILE 31 32 1 Y 1 A ASN 9 ? A ASN 32 33 1 Y 1 A PHE 10 ? A PHE 33 34 1 Y 1 A ASP 11 ? A ASP 34 35 1 Y 1 A SER 12 ? A SER 35 36 1 Y 1 A LEU 13 ? A LEU 36 37 1 Y 1 A ALA 14 ? A ALA 37 38 1 Y 1 A ARG 15 ? A ARG 38 39 1 Y 1 A ASP 16 ? A ASP 39 40 1 Y 1 A TYR 17 ? A TYR 40 41 1 Y 1 A PRO 18 ? A PRO 41 42 1 Y 1 A ASP 19 ? A ASP 42 43 1 Y 1 A LEU 20 ? A LEU 43 44 1 Y 1 A ARG 21 ? A ARG 44 45 1 Y 1 A SER 22 ? A SER 45 46 1 Y 1 A PHE 23 ? A PHE 46 47 1 Y 1 A VAL 24 ? A VAL 47 48 1 Y 1 A LYS 25 ? A LYS 48 49 1 Y 1 A ASN 26 ? A ASN 49 50 1 Y 1 A GLY 27 ? A GLY 50 51 1 Y 1 A ARG 28 ? A ARG 51 52 1 Y 1 A ILE 29 ? A ILE 52 53 1 Y 1 A ASP 30 ? A ASP 53 54 1 Y 1 A PHE 31 ? A PHE 54 55 1 Y 1 A TRP 32 ? A TRP 55 56 1 Y 1 A ASN 33 ? A ASN 56 57 1 Y 1 A GLU 34 ? A GLU 57 58 1 Y 1 A ASP 35 ? A ASP 58 59 1 Y 1 A ALA 36 ? A ALA 59 60 1 Y 1 A ILE 37 ? A ILE 60 61 1 Y 1 A ARG 38 ? A ARG 61 62 1 Y 1 A THR 39 ? A THR 62 63 1 Y 1 A LEU 40 ? A LEU 63 64 1 Y 1 A GLY 41 ? A GLY 64 65 1 Y 1 A LYS 42 ? A LYS 65 66 1 Y 1 A ALA 43 ? A ALA 66 67 1 Y 1 A ILE 44 ? A ILE 67 68 1 Y 1 A LEU 45 ? A LEU 68 69 1 Y 1 A ASP 46 ? A ASP 69 70 1 Y 1 A ARG 47 ? A ARG 70 71 1 Y 1 A ASP 48 ? A ASP 71 72 1 Y 1 A TYR 49 ? A TYR 72 73 1 Y 1 A SER 50 ? A SER 73 74 1 Y 1 A LEU 51 ? A LEU 74 75 1 Y 1 A ARG 52 ? A ARG 75 76 1 Y 1 A VAL 53 ? A VAL 76 77 1 Y 1 A GLU 54 ? A GLU 77 78 1 Y 1 A PHE 55 ? A PHE 78 79 1 Y 1 A SER 187 ? A SER 210 80 1 Y 1 A GLY 188 ? A GLY 211 81 1 Y 1 A VAL 189 ? A VAL 212 82 1 Y 1 A CYS 190 ? A CYS 213 83 1 Y 1 A THR 191 ? A THR 214 84 1 Y 1 A GLY 192 ? A GLY 215 85 1 Y 1 A VAL 193 ? A VAL 216 86 1 Y 1 A TYR 194 ? A TYR 217 87 1 Y 1 B G 1 ? B G 1 88 1 Y 1 B A 2 ? B A 2 89 1 Y 1 B U 3 ? B U 3 90 1 Y 1 B C 4 ? B C 4 91 1 Y 1 B U 5 ? B U 5 92 1 Y 1 B U 6 ? B U 6 93 1 Y 1 B C 7 ? B C 7 94 1 Y 1 B G 8 ? B G 8 95 1 Y 1 B G 9 ? B G 9 96 1 Y 1 B A 10 ? B A 10 97 1 Y 1 B U 11 ? B U 11 98 1 Y 1 B C 12 ? B C 12 99 1 Y 1 B A 13 ? B A 13 100 1 Y 1 B C 14 ? B C 14 101 1 Y 1 B U 15 ? B U 15 102 1 Y 1 B U 16 ? B U 16 103 1 Y 1 B U 17 ? B U 17 104 1 Y 1 B G 18 ? B G 18 105 1 Y 1 B G 19 ? B G 19 106 1 Y 1 B U 20 ? B U 20 107 1 Y 1 B C 21 ? B C 21 108 1 Y 1 B A 22 ? B A 22 109 1 Y 1 B A 23 ? B A 23 110 1 Y 1 B A 24 ? B A 24 111 1 Y 1 B U 25 ? B U 25 112 1 Y 1 B U 26 ? B U 26 113 1 Y 1 B G 27 ? B G 27 114 1 Y 1 B A 28 ? B A 28 115 1 Y 1 B A 29 ? B A 29 116 1 Y 1 B A 30 ? B A 30 117 1 Y 1 B C 31 ? B C 31 118 1 Y 1 B G 32 ? B G 32 119 1 Y 1 B A 33 ? B A 33 120 1 Y 1 B U 34 ? B U 34 121 1 Y 1 B A 84 ? B A 84 122 1 Y 1 B G 85 ? B G 85 123 1 Y 1 B A 86 ? B A 86 124 1 Y 1 B G 87 ? B G 87 125 1 Y 1 B A 88 ? B A 88 126 1 Y 1 B A 89 ? B A 89 127 1 Y 1 B A 90 ? B A 90 128 1 Y 1 B A 91 ? B A 91 129 1 Y 1 B C 92 ? B C 92 130 1 Y 1 B C 93 ? B C 93 131 1 Y 1 B C 94 ? B C 94 132 1 Y 1 B A 95 ? B A 95 133 1 Y 1 B U 96 ? B U 96 134 1 Y 1 B U 97 ? B U 97 135 1 Y 1 B U 98 ? B U 98 136 1 Y 1 B U 99 ? B U 99 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 CYS N N N N 146 CYS CA C N R 147 CYS C C N N 148 CYS O O N N 149 CYS CB C N N 150 CYS SG S N N 151 CYS OXT O N N 152 CYS H H N N 153 CYS H2 H N N 154 CYS HA H N N 155 CYS HB2 H N N 156 CYS HB3 H N N 157 CYS HG H N N 158 CYS HXT H N N 159 G OP3 O N N 160 G P P N N 161 G OP1 O N N 162 G OP2 O N N 163 G "O5'" O N N 164 G "C5'" C N N 165 G "C4'" C N R 166 G "O4'" O N N 167 G "C3'" C N S 168 G "O3'" O N N 169 G "C2'" C N R 170 G "O2'" O N N 171 G "C1'" C N R 172 G N9 N Y N 173 G C8 C Y N 174 G N7 N Y N 175 G C5 C Y N 176 G C6 C N N 177 G O6 O N N 178 G N1 N N N 179 G C2 C N N 180 G N2 N N N 181 G N3 N N N 182 G C4 C Y N 183 G HOP3 H N N 184 G HOP2 H N N 185 G "H5'" H N N 186 G "H5''" H N N 187 G "H4'" H N N 188 G "H3'" H N N 189 G "HO3'" H N N 190 G "H2'" H N N 191 G "HO2'" H N N 192 G "H1'" H N N 193 G H8 H N N 194 G H1 H N N 195 G H21 H N N 196 G H22 H N N 197 GLN N N N N 198 GLN CA C N S 199 GLN C C N N 200 GLN O O N N 201 GLN CB C N N 202 GLN CG C N N 203 GLN CD C N N 204 GLN OE1 O N N 205 GLN NE2 N N N 206 GLN OXT O N N 207 GLN H H N N 208 GLN H2 H N N 209 GLN HA H N N 210 GLN HB2 H N N 211 GLN HB3 H N N 212 GLN HG2 H N N 213 GLN HG3 H N N 214 GLN HE21 H N N 215 GLN HE22 H N N 216 GLN HXT H N N 217 GLU N N N N 218 GLU CA C N S 219 GLU C C N N 220 GLU O O N N 221 GLU CB C N N 222 GLU CG C N N 223 GLU CD C N N 224 GLU OE1 O N N 225 GLU OE2 O N N 226 GLU OXT O N N 227 GLU H H N N 228 GLU H2 H N N 229 GLU HA H N N 230 GLU HB2 H N N 231 GLU HB3 H N N 232 GLU HG2 H N N 233 GLU HG3 H N N 234 GLU HE2 H N N 235 GLU HXT H N N 236 GLY N N N N 237 GLY CA C N N 238 GLY C C N N 239 GLY O O N N 240 GLY OXT O N N 241 GLY H H N N 242 GLY H2 H N N 243 GLY HA2 H N N 244 GLY HA3 H N N 245 GLY HXT H N N 246 HIS N N N N 247 HIS CA C N S 248 HIS C C N N 249 HIS O O N N 250 HIS CB C N N 251 HIS CG C Y N 252 HIS ND1 N Y N 253 HIS CD2 C Y N 254 HIS CE1 C Y N 255 HIS NE2 N Y N 256 HIS OXT O N N 257 HIS H H N N 258 HIS H2 H N N 259 HIS HA H N N 260 HIS HB2 H N N 261 HIS HB3 H N N 262 HIS HD1 H N N 263 HIS HD2 H N N 264 HIS HE1 H N N 265 HIS HE2 H N N 266 HIS HXT H N N 267 ILE N N N N 268 ILE CA C N S 269 ILE C C N N 270 ILE O O N N 271 ILE CB C N S 272 ILE CG1 C N N 273 ILE CG2 C N N 274 ILE CD1 C N N 275 ILE OXT O N N 276 ILE H H N N 277 ILE H2 H N N 278 ILE HA H N N 279 ILE HB H N N 280 ILE HG12 H N N 281 ILE HG13 H N N 282 ILE HG21 H N N 283 ILE HG22 H N N 284 ILE HG23 H N N 285 ILE HD11 H N N 286 ILE HD12 H N N 287 ILE HD13 H N N 288 ILE HXT H N N 289 LEU N N N N 290 LEU CA C N S 291 LEU C C N N 292 LEU O O N N 293 LEU CB C N N 294 LEU CG C N N 295 LEU CD1 C N N 296 LEU CD2 C N N 297 LEU OXT O N N 298 LEU H H N N 299 LEU H2 H N N 300 LEU HA H N N 301 LEU HB2 H N N 302 LEU HB3 H N N 303 LEU HG H N N 304 LEU HD11 H N N 305 LEU HD12 H N N 306 LEU HD13 H N N 307 LEU HD21 H N N 308 LEU HD22 H N N 309 LEU HD23 H N N 310 LEU HXT H N N 311 LYS N N N N 312 LYS CA C N S 313 LYS C C N N 314 LYS O O N N 315 LYS CB C N N 316 LYS CG C N N 317 LYS CD C N N 318 LYS CE C N N 319 LYS NZ N N N 320 LYS OXT O N N 321 LYS H H N N 322 LYS H2 H N N 323 LYS HA H N N 324 LYS HB2 H N N 325 LYS HB3 H N N 326 LYS HG2 H N N 327 LYS HG3 H N N 328 LYS HD2 H N N 329 LYS HD3 H N N 330 LYS HE2 H N N 331 LYS HE3 H N N 332 LYS HZ1 H N N 333 LYS HZ2 H N N 334 LYS HZ3 H N N 335 LYS HXT H N N 336 MET N N N N 337 MET CA C N S 338 MET C C N N 339 MET O O N N 340 MET CB C N N 341 MET CG C N N 342 MET SD S N N 343 MET CE C N N 344 MET OXT O N N 345 MET H H N N 346 MET H2 H N N 347 MET HA H N N 348 MET HB2 H N N 349 MET HB3 H N N 350 MET HG2 H N N 351 MET HG3 H N N 352 MET HE1 H N N 353 MET HE2 H N N 354 MET HE3 H N N 355 MET HXT H N N 356 PHE N N N N 357 PHE CA C N S 358 PHE C C N N 359 PHE O O N N 360 PHE CB C N N 361 PHE CG C Y N 362 PHE CD1 C Y N 363 PHE CD2 C Y N 364 PHE CE1 C Y N 365 PHE CE2 C Y N 366 PHE CZ C Y N 367 PHE OXT O N N 368 PHE H H N N 369 PHE H2 H N N 370 PHE HA H N N 371 PHE HB2 H N N 372 PHE HB3 H N N 373 PHE HD1 H N N 374 PHE HD2 H N N 375 PHE HE1 H N N 376 PHE HE2 H N N 377 PHE HZ H N N 378 PHE HXT H N N 379 PRO N N N N 380 PRO CA C N S 381 PRO C C N N 382 PRO O O N N 383 PRO CB C N N 384 PRO CG C N N 385 PRO CD C N N 386 PRO OXT O N N 387 PRO H H N N 388 PRO HA H N N 389 PRO HB2 H N N 390 PRO HB3 H N N 391 PRO HG2 H N N 392 PRO HG3 H N N 393 PRO HD2 H N N 394 PRO HD3 H N N 395 PRO HXT H N N 396 SAM N N N N 397 SAM CA C N S 398 SAM C C N N 399 SAM O O N N 400 SAM OXT O N N 401 SAM CB C N N 402 SAM CG C N N 403 SAM SD S N S 404 SAM CE C N N 405 SAM "C5'" C N N 406 SAM "C4'" C N S 407 SAM "O4'" O N N 408 SAM "C3'" C N S 409 SAM "O3'" O N N 410 SAM "C2'" C N R 411 SAM "O2'" O N N 412 SAM "C1'" C N R 413 SAM N9 N Y N 414 SAM C8 C Y N 415 SAM N7 N Y N 416 SAM C5 C Y N 417 SAM C6 C Y N 418 SAM N6 N N N 419 SAM N1 N Y N 420 SAM C2 C Y N 421 SAM N3 N Y N 422 SAM C4 C Y N 423 SAM HN1 H N N 424 SAM HN2 H N N 425 SAM HA H N N 426 SAM HB1 H N N 427 SAM HB2 H N N 428 SAM HG1 H N N 429 SAM HG2 H N N 430 SAM HE1 H N N 431 SAM HE2 H N N 432 SAM HE3 H N N 433 SAM "H5'1" H N N 434 SAM "H5'2" H N N 435 SAM "H4'" H N N 436 SAM "H3'" H N N 437 SAM "HO3'" H N N 438 SAM "H2'" H N N 439 SAM "HO2'" H N N 440 SAM "H1'" H N N 441 SAM H8 H N N 442 SAM HN61 H N N 443 SAM HN62 H N N 444 SAM H2 H N N 445 SER N N N N 446 SER CA C N S 447 SER C C N N 448 SER O O N N 449 SER CB C N N 450 SER OG O N N 451 SER OXT O N N 452 SER H H N N 453 SER H2 H N N 454 SER HA H N N 455 SER HB2 H N N 456 SER HB3 H N N 457 SER HG H N N 458 SER HXT H N N 459 THR N N N N 460 THR CA C N S 461 THR C C N N 462 THR O O N N 463 THR CB C N R 464 THR OG1 O N N 465 THR CG2 C N N 466 THR OXT O N N 467 THR H H N N 468 THR H2 H N N 469 THR HA H N N 470 THR HB H N N 471 THR HG1 H N N 472 THR HG21 H N N 473 THR HG22 H N N 474 THR HG23 H N N 475 THR HXT H N N 476 TRP N N N N 477 TRP CA C N S 478 TRP C C N N 479 TRP O O N N 480 TRP CB C N N 481 TRP CG C Y N 482 TRP CD1 C Y N 483 TRP CD2 C Y N 484 TRP NE1 N Y N 485 TRP CE2 C Y N 486 TRP CE3 C Y N 487 TRP CZ2 C Y N 488 TRP CZ3 C Y N 489 TRP CH2 C Y N 490 TRP OXT O N N 491 TRP H H N N 492 TRP H2 H N N 493 TRP HA H N N 494 TRP HB2 H N N 495 TRP HB3 H N N 496 TRP HD1 H N N 497 TRP HE1 H N N 498 TRP HE3 H N N 499 TRP HZ2 H N N 500 TRP HZ3 H N N 501 TRP HH2 H N N 502 TRP HXT H N N 503 TYR N N N N 504 TYR CA C N S 505 TYR C C N N 506 TYR O O N N 507 TYR CB C N N 508 TYR CG C Y N 509 TYR CD1 C Y N 510 TYR CD2 C Y N 511 TYR CE1 C Y N 512 TYR CE2 C Y N 513 TYR CZ C Y N 514 TYR OH O N N 515 TYR OXT O N N 516 TYR H H N N 517 TYR H2 H N N 518 TYR HA H N N 519 TYR HB2 H N N 520 TYR HB3 H N N 521 TYR HD1 H N N 522 TYR HD2 H N N 523 TYR HE1 H N N 524 TYR HE2 H N N 525 TYR HH H N N 526 TYR HXT H N N 527 U OP3 O N N 528 U P P N N 529 U OP1 O N N 530 U OP2 O N N 531 U "O5'" O N N 532 U "C5'" C N N 533 U "C4'" C N R 534 U "O4'" O N N 535 U "C3'" C N S 536 U "O3'" O N N 537 U "C2'" C N R 538 U "O2'" O N N 539 U "C1'" C N R 540 U N1 N N N 541 U C2 C N N 542 U O2 O N N 543 U N3 N N N 544 U C4 C N N 545 U O4 O N N 546 U C5 C N N 547 U C6 C N N 548 U HOP3 H N N 549 U HOP2 H N N 550 U "H5'" H N N 551 U "H5''" H N N 552 U "H4'" H N N 553 U "H3'" H N N 554 U "HO3'" H N N 555 U "H2'" H N N 556 U "HO2'" H N N 557 U "H1'" H N N 558 U H3 H N N 559 U H5 H N N 560 U H6 H N N 561 VAL N N N N 562 VAL CA C N S 563 VAL C C N N 564 VAL O O N N 565 VAL CB C N N 566 VAL CG1 C N N 567 VAL CG2 C N N 568 VAL OXT O N N 569 VAL H H N N 570 VAL H2 H N N 571 VAL HA H N N 572 VAL HB H N N 573 VAL HG11 H N N 574 VAL HG12 H N N 575 VAL HG13 H N N 576 VAL HG21 H N N 577 VAL HG22 H N N 578 VAL HG23 H N N 579 VAL HXT H N N 580 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 CYS N CA sing N N 145 CYS N H sing N N 146 CYS N H2 sing N N 147 CYS CA C sing N N 148 CYS CA CB sing N N 149 CYS CA HA sing N N 150 CYS C O doub N N 151 CYS C OXT sing N N 152 CYS CB SG sing N N 153 CYS CB HB2 sing N N 154 CYS CB HB3 sing N N 155 CYS SG HG sing N N 156 CYS OXT HXT sing N N 157 G OP3 P sing N N 158 G OP3 HOP3 sing N N 159 G P OP1 doub N N 160 G P OP2 sing N N 161 G P "O5'" sing N N 162 G OP2 HOP2 sing N N 163 G "O5'" "C5'" sing N N 164 G "C5'" "C4'" sing N N 165 G "C5'" "H5'" sing N N 166 G "C5'" "H5''" sing N N 167 G "C4'" "O4'" sing N N 168 G "C4'" "C3'" sing N N 169 G "C4'" "H4'" sing N N 170 G "O4'" "C1'" sing N N 171 G "C3'" "O3'" sing N N 172 G "C3'" "C2'" sing N N 173 G "C3'" "H3'" sing N N 174 G "O3'" "HO3'" sing N N 175 G "C2'" "O2'" sing N N 176 G "C2'" "C1'" sing N N 177 G "C2'" "H2'" sing N N 178 G "O2'" "HO2'" sing N N 179 G "C1'" N9 sing N N 180 G "C1'" "H1'" sing N N 181 G N9 C8 sing Y N 182 G N9 C4 sing Y N 183 G C8 N7 doub Y N 184 G C8 H8 sing N N 185 G N7 C5 sing Y N 186 G C5 C6 sing N N 187 G C5 C4 doub Y N 188 G C6 O6 doub N N 189 G C6 N1 sing N N 190 G N1 C2 sing N N 191 G N1 H1 sing N N 192 G C2 N2 sing N N 193 G C2 N3 doub N N 194 G N2 H21 sing N N 195 G N2 H22 sing N N 196 G N3 C4 sing N N 197 GLN N CA sing N N 198 GLN N H sing N N 199 GLN N H2 sing N N 200 GLN CA C sing N N 201 GLN CA CB sing N N 202 GLN CA HA sing N N 203 GLN C O doub N N 204 GLN C OXT sing N N 205 GLN CB CG sing N N 206 GLN CB HB2 sing N N 207 GLN CB HB3 sing N N 208 GLN CG CD sing N N 209 GLN CG HG2 sing N N 210 GLN CG HG3 sing N N 211 GLN CD OE1 doub N N 212 GLN CD NE2 sing N N 213 GLN NE2 HE21 sing N N 214 GLN NE2 HE22 sing N N 215 GLN OXT HXT sing N N 216 GLU N CA sing N N 217 GLU N H sing N N 218 GLU N H2 sing N N 219 GLU CA C sing N N 220 GLU CA CB sing N N 221 GLU CA HA sing N N 222 GLU C O doub N N 223 GLU C OXT sing N N 224 GLU CB CG sing N N 225 GLU CB HB2 sing N N 226 GLU CB HB3 sing N N 227 GLU CG CD sing N N 228 GLU CG HG2 sing N N 229 GLU CG HG3 sing N N 230 GLU CD OE1 doub N N 231 GLU CD OE2 sing N N 232 GLU OE2 HE2 sing N N 233 GLU OXT HXT sing N N 234 GLY N CA sing N N 235 GLY N H sing N N 236 GLY N H2 sing N N 237 GLY CA C sing N N 238 GLY CA HA2 sing N N 239 GLY CA HA3 sing N N 240 GLY C O doub N N 241 GLY C OXT sing N N 242 GLY OXT HXT sing N N 243 HIS N CA sing N N 244 HIS N H sing N N 245 HIS N H2 sing N N 246 HIS CA C sing N N 247 HIS CA CB sing N N 248 HIS CA HA sing N N 249 HIS C O doub N N 250 HIS C OXT sing N N 251 HIS CB CG sing N N 252 HIS CB HB2 sing N N 253 HIS CB HB3 sing N N 254 HIS CG ND1 sing Y N 255 HIS CG CD2 doub Y N 256 HIS ND1 CE1 doub Y N 257 HIS ND1 HD1 sing N N 258 HIS CD2 NE2 sing Y N 259 HIS CD2 HD2 sing N N 260 HIS CE1 NE2 sing Y N 261 HIS CE1 HE1 sing N N 262 HIS NE2 HE2 sing N N 263 HIS OXT HXT sing N N 264 ILE N CA sing N N 265 ILE N H sing N N 266 ILE N H2 sing N N 267 ILE CA C sing N N 268 ILE CA CB sing N N 269 ILE CA HA sing N N 270 ILE C O doub N N 271 ILE C OXT sing N N 272 ILE CB CG1 sing N N 273 ILE CB CG2 sing N N 274 ILE CB HB sing N N 275 ILE CG1 CD1 sing N N 276 ILE CG1 HG12 sing N N 277 ILE CG1 HG13 sing N N 278 ILE CG2 HG21 sing N N 279 ILE CG2 HG22 sing N N 280 ILE CG2 HG23 sing N N 281 ILE CD1 HD11 sing N N 282 ILE CD1 HD12 sing N N 283 ILE CD1 HD13 sing N N 284 ILE OXT HXT sing N N 285 LEU N CA sing N N 286 LEU N H sing N N 287 LEU N H2 sing N N 288 LEU CA C sing N N 289 LEU CA CB sing N N 290 LEU CA HA sing N N 291 LEU C O doub N N 292 LEU C OXT sing N N 293 LEU CB CG sing N N 294 LEU CB HB2 sing N N 295 LEU CB HB3 sing N N 296 LEU CG CD1 sing N N 297 LEU CG CD2 sing N N 298 LEU CG HG sing N N 299 LEU CD1 HD11 sing N N 300 LEU CD1 HD12 sing N N 301 LEU CD1 HD13 sing N N 302 LEU CD2 HD21 sing N N 303 LEU CD2 HD22 sing N N 304 LEU CD2 HD23 sing N N 305 LEU OXT HXT sing N N 306 LYS N CA sing N N 307 LYS N H sing N N 308 LYS N H2 sing N N 309 LYS CA C sing N N 310 LYS CA CB sing N N 311 LYS CA HA sing N N 312 LYS C O doub N N 313 LYS C OXT sing N N 314 LYS CB CG sing N N 315 LYS CB HB2 sing N N 316 LYS CB HB3 sing N N 317 LYS CG CD sing N N 318 LYS CG HG2 sing N N 319 LYS CG HG3 sing N N 320 LYS CD CE sing N N 321 LYS CD HD2 sing N N 322 LYS CD HD3 sing N N 323 LYS CE NZ sing N N 324 LYS CE HE2 sing N N 325 LYS CE HE3 sing N N 326 LYS NZ HZ1 sing N N 327 LYS NZ HZ2 sing N N 328 LYS NZ HZ3 sing N N 329 LYS OXT HXT sing N N 330 MET N CA sing N N 331 MET N H sing N N 332 MET N H2 sing N N 333 MET CA C sing N N 334 MET CA CB sing N N 335 MET CA HA sing N N 336 MET C O doub N N 337 MET C OXT sing N N 338 MET CB CG sing N N 339 MET CB HB2 sing N N 340 MET CB HB3 sing N N 341 MET CG SD sing N N 342 MET CG HG2 sing N N 343 MET CG HG3 sing N N 344 MET SD CE sing N N 345 MET CE HE1 sing N N 346 MET CE HE2 sing N N 347 MET CE HE3 sing N N 348 MET OXT HXT sing N N 349 PHE N CA sing N N 350 PHE N H sing N N 351 PHE N H2 sing N N 352 PHE CA C sing N N 353 PHE CA CB sing N N 354 PHE CA HA sing N N 355 PHE C O doub N N 356 PHE C OXT sing N N 357 PHE CB CG sing N N 358 PHE CB HB2 sing N N 359 PHE CB HB3 sing N N 360 PHE CG CD1 doub Y N 361 PHE CG CD2 sing Y N 362 PHE CD1 CE1 sing Y N 363 PHE CD1 HD1 sing N N 364 PHE CD2 CE2 doub Y N 365 PHE CD2 HD2 sing N N 366 PHE CE1 CZ doub Y N 367 PHE CE1 HE1 sing N N 368 PHE CE2 CZ sing Y N 369 PHE CE2 HE2 sing N N 370 PHE CZ HZ sing N N 371 PHE OXT HXT sing N N 372 PRO N CA sing N N 373 PRO N CD sing N N 374 PRO N H sing N N 375 PRO CA C sing N N 376 PRO CA CB sing N N 377 PRO CA HA sing N N 378 PRO C O doub N N 379 PRO C OXT sing N N 380 PRO CB CG sing N N 381 PRO CB HB2 sing N N 382 PRO CB HB3 sing N N 383 PRO CG CD sing N N 384 PRO CG HG2 sing N N 385 PRO CG HG3 sing N N 386 PRO CD HD2 sing N N 387 PRO CD HD3 sing N N 388 PRO OXT HXT sing N N 389 SAM N CA sing N N 390 SAM N HN1 sing N N 391 SAM N HN2 sing N N 392 SAM CA C sing N N 393 SAM CA CB sing N N 394 SAM CA HA sing N N 395 SAM C O doub N N 396 SAM C OXT sing N N 397 SAM CB CG sing N N 398 SAM CB HB1 sing N N 399 SAM CB HB2 sing N N 400 SAM CG SD sing N N 401 SAM CG HG1 sing N N 402 SAM CG HG2 sing N N 403 SAM SD CE sing N N 404 SAM SD "C5'" sing N N 405 SAM CE HE1 sing N N 406 SAM CE HE2 sing N N 407 SAM CE HE3 sing N N 408 SAM "C5'" "C4'" sing N N 409 SAM "C5'" "H5'1" sing N N 410 SAM "C5'" "H5'2" sing N N 411 SAM "C4'" "O4'" sing N N 412 SAM "C4'" "C3'" sing N N 413 SAM "C4'" "H4'" sing N N 414 SAM "O4'" "C1'" sing N N 415 SAM "C3'" "O3'" sing N N 416 SAM "C3'" "C2'" sing N N 417 SAM "C3'" "H3'" sing N N 418 SAM "O3'" "HO3'" sing N N 419 SAM "C2'" "O2'" sing N N 420 SAM "C2'" "C1'" sing N N 421 SAM "C2'" "H2'" sing N N 422 SAM "O2'" "HO2'" sing N N 423 SAM "C1'" N9 sing N N 424 SAM "C1'" "H1'" sing N N 425 SAM N9 C8 sing Y N 426 SAM N9 C4 sing Y N 427 SAM C8 N7 doub Y N 428 SAM C8 H8 sing N N 429 SAM N7 C5 sing Y N 430 SAM C5 C6 sing Y N 431 SAM C5 C4 doub Y N 432 SAM C6 N6 sing N N 433 SAM C6 N1 doub Y N 434 SAM N6 HN61 sing N N 435 SAM N6 HN62 sing N N 436 SAM N1 C2 sing Y N 437 SAM C2 N3 doub Y N 438 SAM C2 H2 sing N N 439 SAM N3 C4 sing Y N 440 SER N CA sing N N 441 SER N H sing N N 442 SER N H2 sing N N 443 SER CA C sing N N 444 SER CA CB sing N N 445 SER CA HA sing N N 446 SER C O doub N N 447 SER C OXT sing N N 448 SER CB OG sing N N 449 SER CB HB2 sing N N 450 SER CB HB3 sing N N 451 SER OG HG sing N N 452 SER OXT HXT sing N N 453 THR N CA sing N N 454 THR N H sing N N 455 THR N H2 sing N N 456 THR CA C sing N N 457 THR CA CB sing N N 458 THR CA HA sing N N 459 THR C O doub N N 460 THR C OXT sing N N 461 THR CB OG1 sing N N 462 THR CB CG2 sing N N 463 THR CB HB sing N N 464 THR OG1 HG1 sing N N 465 THR CG2 HG21 sing N N 466 THR CG2 HG22 sing N N 467 THR CG2 HG23 sing N N 468 THR OXT HXT sing N N 469 TRP N CA sing N N 470 TRP N H sing N N 471 TRP N H2 sing N N 472 TRP CA C sing N N 473 TRP CA CB sing N N 474 TRP CA HA sing N N 475 TRP C O doub N N 476 TRP C OXT sing N N 477 TRP CB CG sing N N 478 TRP CB HB2 sing N N 479 TRP CB HB3 sing N N 480 TRP CG CD1 doub Y N 481 TRP CG CD2 sing Y N 482 TRP CD1 NE1 sing Y N 483 TRP CD1 HD1 sing N N 484 TRP CD2 CE2 doub Y N 485 TRP CD2 CE3 sing Y N 486 TRP NE1 CE2 sing Y N 487 TRP NE1 HE1 sing N N 488 TRP CE2 CZ2 sing Y N 489 TRP CE3 CZ3 doub Y N 490 TRP CE3 HE3 sing N N 491 TRP CZ2 CH2 doub Y N 492 TRP CZ2 HZ2 sing N N 493 TRP CZ3 CH2 sing Y N 494 TRP CZ3 HZ3 sing N N 495 TRP CH2 HH2 sing N N 496 TRP OXT HXT sing N N 497 TYR N CA sing N N 498 TYR N H sing N N 499 TYR N H2 sing N N 500 TYR CA C sing N N 501 TYR CA CB sing N N 502 TYR CA HA sing N N 503 TYR C O doub N N 504 TYR C OXT sing N N 505 TYR CB CG sing N N 506 TYR CB HB2 sing N N 507 TYR CB HB3 sing N N 508 TYR CG CD1 doub Y N 509 TYR CG CD2 sing Y N 510 TYR CD1 CE1 sing Y N 511 TYR CD1 HD1 sing N N 512 TYR CD2 CE2 doub Y N 513 TYR CD2 HD2 sing N N 514 TYR CE1 CZ doub Y N 515 TYR CE1 HE1 sing N N 516 TYR CE2 CZ sing Y N 517 TYR CE2 HE2 sing N N 518 TYR CZ OH sing N N 519 TYR OH HH sing N N 520 TYR OXT HXT sing N N 521 U OP3 P sing N N 522 U OP3 HOP3 sing N N 523 U P OP1 doub N N 524 U P OP2 sing N N 525 U P "O5'" sing N N 526 U OP2 HOP2 sing N N 527 U "O5'" "C5'" sing N N 528 U "C5'" "C4'" sing N N 529 U "C5'" "H5'" sing N N 530 U "C5'" "H5''" sing N N 531 U "C4'" "O4'" sing N N 532 U "C4'" "C3'" sing N N 533 U "C4'" "H4'" sing N N 534 U "O4'" "C1'" sing N N 535 U "C3'" "O3'" sing N N 536 U "C3'" "C2'" sing N N 537 U "C3'" "H3'" sing N N 538 U "O3'" "HO3'" sing N N 539 U "C2'" "O2'" sing N N 540 U "C2'" "C1'" sing N N 541 U "C2'" "H2'" sing N N 542 U "O2'" "HO2'" sing N N 543 U "C1'" N1 sing N N 544 U "C1'" "H1'" sing N N 545 U N1 C2 sing N N 546 U N1 C6 sing N N 547 U C2 O2 doub N N 548 U C2 N3 sing N N 549 U N3 C4 sing N N 550 U N3 H3 sing N N 551 U C4 O4 doub N N 552 U C4 C5 sing N N 553 U C5 C6 doub N N 554 U C5 H5 sing N N 555 U C6 H6 sing N N 556 VAL N CA sing N N 557 VAL N H sing N N 558 VAL N H2 sing N N 559 VAL CA C sing N N 560 VAL CA CB sing N N 561 VAL CA HA sing N N 562 VAL C O doub N N 563 VAL C OXT sing N N 564 VAL CB CG1 sing N N 565 VAL CB CG2 sing N N 566 VAL CB HB sing N N 567 VAL CG1 HG11 sing N N 568 VAL CG1 HG12 sing N N 569 VAL CG1 HG13 sing N N 570 VAL CG2 HG21 sing N N 571 VAL CG2 HG22 sing N N 572 VAL CG2 HG23 sing N N 573 VAL OXT HXT sing N N 574 # _em_admin.current_status REL _em_admin.deposition_date 2025-03-19 _em_admin.deposition_site PDBJ _em_admin.entry_id 9U48 _em_admin.last_update 2025-09-24 _em_admin.map_release_date 2025-08-06 _em_admin.title 'Cryo-EM structure of spMETTL16 in complex with U6 snRNA and SAM' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units ? _em_entity_assembly_molwt.value ? # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 1 _em_entity_assembly_naturalsource.ncbi_tax_id 4896 _em_entity_assembly_naturalsource.organism 'Schizosaccharomyces pombe' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 1 _em_entity_assembly_recombinant.ncbi_tax_id 469008 _em_entity_assembly_recombinant.organism 'Escherichia coli BL21(DE3)' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain Rosetta2 # _em_entity_assembly_synthetic.cell ? _em_entity_assembly_synthetic.cellular_location ? _em_entity_assembly_synthetic.entity_assembly_id 1 _em_entity_assembly_synthetic.id 1 _em_entity_assembly_synthetic.ncbi_tax_id 4896 _em_entity_assembly_synthetic.organ ? _em_entity_assembly_synthetic.organelle ? _em_entity_assembly_synthetic.organism 'Schizosaccharomyces pombe' _em_entity_assembly_synthetic.strain ? _em_entity_assembly_synthetic.tissue ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time 1 _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 50 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 BIOQUANTUM (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged 1 _em_image_recording.num_real_images 8497 # _em_particle_selection.details ? _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.method ? _em_particle_selection.num_particles_selected 5415176 _em_particle_selection.reference_model ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version _em_software.reference_DOI 'PARTICLE SELECTION' ? 1 1 ? ? cryoSPARC 4.6.0 ? 'IMAGE ACQUISITION' ? 2 ? ? 1 EPU ? ? MASKING ? 3 ? ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? cryoSPARC 4.6.0 ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? ? 'MODEL FITTING' ? 7 ? 1 ? 'UCSF ChimeraX' 1.8 ? OTHER ? 8 ? ? ? ? ? ? 'MODEL REFINEMENT' ? 9 ? 1 ? PHENIX 1.18.2_3874 ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? cryoSPARC 4.6.0 ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? cryoSPARC 4.6.0 ? CLASSIFICATION ? 12 1 ? ? ? ? ? RECONSTRUCTION ? 13 1 ? ? cryoSPARC 4.6.0 ? 'VOLUME SELECTION' ? 14 1 1 1 ? ? ? 'SERIES ALIGNMENT' ? 15 1 1 1 ? ? ? 'MOLECULAR REPLACEMENT' ? 16 1 1 1 ? ? ? 'LATTICE DISTORTION CORRECTION' ? 17 1 1 1 ? ? ? 'SYMMETRY DETERMINATION' ? 18 1 1 1 ? ? ? 'CRYSTALLOGRAPHY MERGING' ? 19 1 1 1 ? ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 9U48 'double helix' 9U48 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B A 41 1_555 B G 83 1_555 -7.042 -1.669 -1.335 -55.777 24.649 -99.390 1 B_A41:G83_B B 41 ? B 83 ? ? ? 1 B G 43 1_555 B U 82 1_555 -1.087 -0.087 0.582 -5.272 -18.286 -41.776 2 B_G43:U82_B B 43 ? B 82 ? ? ? 1 B A 44 1_555 B U 81 1_555 -0.149 0.409 0.034 -0.097 -0.256 -19.427 3 B_A44:U81_B B 44 ? B 81 ? 20 1 1 B U 45 1_555 B A 80 1_555 -0.078 -0.100 0.119 -2.927 -4.558 -2.214 4 B_U45:A80_B B 45 ? B 80 ? 20 1 1 B U 46 1_555 B C 79 1_555 3.040 -2.189 0.027 0.147 -1.917 -4.454 5 B_U46:C79_B B 46 ? B 79 ? ? 1 1 B A 47 1_555 B G 77 1_555 -6.746 -3.422 0.154 0.063 1.562 -13.512 6 B_A47:G77_B B 47 ? B 77 ? 11 10 1 B G 48 1_555 B C 76 1_555 -0.184 -0.093 -0.110 1.480 1.867 -0.716 7 B_G48:C76_B B 48 ? B 76 ? 19 1 1 B C 49 1_555 B G 75 1_555 0.167 -0.150 0.042 1.616 -3.577 -3.597 8 B_C49:G75_B B 49 ? B 75 ? 19 1 1 B A 50 1_555 B U 74 1_555 0.095 -0.091 -0.344 0.311 -2.900 1.691 9 B_A50:U74_B B 50 ? B 74 ? 20 1 1 B U 51 1_555 B A 72 1_555 -0.050 -0.181 -0.313 -1.384 -4.613 1.247 10 B_U51:A72_B B 51 ? B 72 ? 20 1 1 B G 52 1_555 B C 71 1_555 -0.150 -0.149 -0.256 -0.126 -4.749 -1.344 11 B_G52:C71_B B 52 ? B 71 ? 19 1 1 B G 53 1_555 B A 70 1_555 -0.689 1.425 -0.251 4.885 -4.653 -15.057 12 B_G53:A70_B B 53 ? B 70 ? 8 1 1 B C 54 1_555 B G 69 1_555 0.132 -0.112 -0.274 -2.325 -4.475 2.836 13 B_C54:G69_B B 54 ? B 69 ? 19 1 1 B C 55 1_555 B A 67 1_555 -2.124 0.784 0.033 2.898 -5.868 -8.831 14 B_C55:A67_B B 55 ? B 67 ? ? ? 1 B C 56 1_555 B G 66 1_555 0.179 -0.056 -0.003 1.452 -3.031 -0.403 15 B_C56:G66_B B 56 ? B 66 ? 19 1 1 B C 57 1_555 B G 65 1_555 0.131 -0.055 -0.004 5.360 1.479 0.997 16 B_C57:G65_B B 57 ? B 65 ? 19 1 1 B U 58 1_555 B A 64 1_555 0.005 -0.036 -0.464 5.968 3.994 0.562 17 B_U58:A64_B B 58 ? B 64 ? 20 1 1 B G 59 1_555 B A 63 1_555 6.522 -2.714 0.706 7.075 -0.014 -12.824 18 B_G59:A63_B B 59 ? B 63 ? 11 9 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B A 41 1_555 B G 83 1_555 B G 43 1_555 B U 82 1_555 5.001 -0.336 3.045 1.153 -26.034 37.318 1.881 -6.398 2.841 -35.844 -1.587 45.249 1 BB_A41G43:U82G83_BB B 41 ? B 83 ? B 43 ? B 82 ? 1 B G 43 1_555 B U 82 1_555 B A 44 1_555 B U 81 1_555 1.161 -1.380 3.659 1.752 -9.595 30.928 -0.457 -1.712 3.958 -17.456 -3.188 32.393 2 BB_G43A44:U81U82_BB B 43 ? B 82 ? B 44 ? B 81 ? 1 B A 44 1_555 B U 81 1_555 B U 45 1_555 B A 80 1_555 0.643 -0.787 3.797 -1.158 16.866 31.892 -3.930 -1.223 2.997 28.344 1.946 35.993 3 BB_A44U45:A80U81_BB B 44 ? B 81 ? B 45 ? B 80 ? 1 B U 45 1_555 B A 80 1_555 B U 46 1_555 B C 79 1_555 0.316 -0.378 3.473 -1.459 2.328 50.511 -0.617 -0.479 3.443 2.726 1.708 50.581 4 BB_U45U46:C79A80_BB B 45 ? B 80 ? B 46 ? B 79 ? 1 B U 46 1_555 B C 79 1_555 B A 47 1_555 B G 77 1_555 1.689 -0.988 3.077 8.743 5.275 17.148 -5.381 -0.689 3.126 15.979 -26.487 19.939 5 BB_U46A47:G77C79_BB B 46 ? B 79 ? B 47 ? B 77 ? 1 B A 47 1_555 B G 77 1_555 B G 48 1_555 B C 76 1_555 2.042 -1.328 3.329 -5.121 18.323 49.526 -2.592 -2.601 2.518 21.000 5.869 52.838 6 BB_A47G48:C76G77_BB B 47 ? B 77 ? B 48 ? B 76 ? 1 B G 48 1_555 B C 76 1_555 B C 49 1_555 B G 75 1_555 -0.335 -1.527 3.192 -4.021 17.213 39.448 -3.595 0.102 2.378 24.088 5.628 43.083 7 BB_G48C49:G75C76_BB B 48 ? B 76 ? B 49 ? B 75 ? 1 B C 49 1_555 B G 75 1_555 B A 50 1_555 B U 74 1_555 0.293 -2.403 3.226 -2.934 2.737 23.937 -6.529 -1.568 2.881 6.539 7.011 24.267 8 BB_C49A50:U74G75_BB B 49 ? B 75 ? B 50 ? B 74 ? 1 B A 50 1_555 B U 74 1_555 B U 51 1_555 B A 72 1_555 1.663 -1.798 3.266 -2.208 -0.042 52.606 -2.025 -2.017 3.200 -0.047 2.490 52.649 9 BB_A50U51:A72U74_BB B 50 ? B 74 ? B 51 ? B 72 ? 1 B U 51 1_555 B A 72 1_555 B G 52 1_555 B C 71 1_555 -0.011 -1.662 3.332 -6.509 9.324 33.846 -4.007 -0.885 2.748 15.482 10.809 35.653 10 BB_U51G52:C71A72_BB B 51 ? B 72 ? B 52 ? B 71 ? 1 B G 52 1_555 B C 71 1_555 B G 53 1_555 B A 70 1_555 -1.313 -2.419 3.158 -2.888 4.018 20.801 -8.035 2.452 2.800 10.929 7.855 21.375 11 BB_G52G53:A70C71_BB B 52 ? B 71 ? B 53 ? B 70 ? 1 B G 53 1_555 B A 70 1_555 B C 54 1_555 B G 69 1_555 1.542 -1.136 3.319 6.372 -3.926 43.860 -1.116 -1.412 3.582 -5.210 -8.457 44.463 12 BB_G53C54:G69A70_BB B 53 ? B 70 ? B 54 ? B 69 ? 1 B C 54 1_555 B G 69 1_555 B C 55 1_555 B A 67 1_555 0.799 -1.945 4.297 -24.178 21.174 36.526 -4.247 -3.112 2.082 28.059 32.040 48.287 13 BB_C54C55:A67G69_BB B 54 ? B 69 ? B 55 ? B 67 ? 1 B C 55 1_555 B A 67 1_555 B C 56 1_555 B G 66 1_555 0.461 -1.852 3.025 -0.355 4.763 40.461 -3.131 -0.697 2.795 6.858 0.512 40.730 14 BB_C55C56:G66A67_BB B 55 ? B 67 ? B 56 ? B 66 ? 1 B C 56 1_555 B G 66 1_555 B C 57 1_555 B G 65 1_555 0.223 -1.666 2.854 -0.884 7.112 30.884 -4.121 -0.542 2.413 13.135 1.632 31.685 15 BB_C56C57:G65G66_BB B 56 ? B 66 ? B 57 ? B 65 ? 1 B C 57 1_555 B G 65 1_555 B U 58 1_555 B A 64 1_555 -0.063 -2.258 3.218 -1.028 17.015 23.335 -7.451 -0.050 1.303 36.473 2.204 28.828 16 BB_C57U58:A64G65_BB B 57 ? B 65 ? B 58 ? B 64 ? 1 B U 58 1_555 B A 64 1_555 B G 59 1_555 B A 63 1_555 -0.691 -1.103 3.528 5.544 16.736 53.644 -2.145 1.056 3.010 18.005 -5.964 56.262 17 BB_U58G59:A63A64_BB B 58 ? B 64 ? B 59 ? B 63 ? # _pdbx_audit_support.funding_organization 'Japan Society for the Promotion of Science (JSPS)' _pdbx_audit_support.country Japan _pdbx_audit_support.grant_number 23H00368 _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'in silico model' _pdbx_initial_refinement_model.source_name AlphaFold _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 9U48 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P S # loop_ # loop_ #