HEADER MEMBRANE PROTEIN 06-APR-25 9UD5 TITLE CRYO-EM STRUCTURE OF NA+-TRANSLOCATING NADH-UBIQUINONE OXIDOREDUCTASE TITLE 2 FROM VIBRIO CHOLERAE REDUCED BY NADH, WITH BOUND KORORMICIN A COMPND MOL_ID: 1; COMPND 2 MOLECULE: NA(+)-TRANSLOCATING NADH-QUINONE REDUCTASE SUBUNIT A; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: NA(+)-NQR SUBUNIT A,NA(+)-TRANSLOCATING NQR SUBUNIT A,NQR COMPND 5 COMPLEX SUBUNIT A,NQR-1 SUBUNIT A; COMPND 6 EC: 7.2.1.1; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: NA(+)-TRANSLOCATING NADH-QUINONE REDUCTASE SUBUNIT B; COMPND 10 CHAIN: B; COMPND 11 SYNONYM: NA(+)-NQR SUBUNIT B,NA(+)-TRANSLOCATING NQR SUBUNIT B,NQR COMPND 12 COMPLEX SUBUNIT B,NQR-1 SUBUNIT B; COMPND 13 EC: 7.2.1.1; COMPND 14 ENGINEERED: YES; COMPND 15 MOL_ID: 3; COMPND 16 MOLECULE: NA(+)-TRANSLOCATING NADH-QUINONE REDUCTASE SUBUNIT C; COMPND 17 CHAIN: C; COMPND 18 SYNONYM: NA(+)-NQR SUBUNIT C,NA(+)-TRANSLOCATING NQR SUBUNIT C,NQR COMPND 19 COMPLEX SUBUNIT C,NQR-1 SUBUNIT C; COMPND 20 EC: 7.2.1.1; COMPND 21 ENGINEERED: YES; COMPND 22 MOL_ID: 4; COMPND 23 MOLECULE: NA(+)-TRANSLOCATING NADH-QUINONE REDUCTASE SUBUNIT D; COMPND 24 CHAIN: D; COMPND 25 SYNONYM: NA(+)-NQR SUBUNIT D,NA(+)-TRANSLOCATING NQR SUBUNIT D,NQR COMPND 26 COMPLEX SUBUNIT D,NQR-1 SUBUNIT D; COMPND 27 EC: 7.2.1.1; COMPND 28 ENGINEERED: YES; COMPND 29 MOL_ID: 5; COMPND 30 MOLECULE: NA(+)-TRANSLOCATING NADH-QUINONE REDUCTASE SUBUNIT E; COMPND 31 CHAIN: E; COMPND 32 SYNONYM: NA(+)-NQR SUBUNIT E,NA(+)-TRANSLOCATING NQR SUBUNIT E,NQR COMPND 33 COMPLEX SUBUNIT E,NQR-1 SUBUNIT E; COMPND 34 EC: 7.2.1.1; COMPND 35 ENGINEERED: YES; COMPND 36 MOL_ID: 6; COMPND 37 MOLECULE: NA(+)-TRANSLOCATING NADH-QUINONE REDUCTASE SUBUNIT F; COMPND 38 CHAIN: F; COMPND 39 SYNONYM: NA(+)-NQR SUBUNIT F,NA(+)-TRANSLOCATING NQR SUBUNIT F,NQR COMPND 40 COMPLEX SUBUNIT F,NQR-1 SUBUNIT F; COMPND 41 EC: 7.2.1.1; COMPND 42 ENGINEERED: YES; COMPND 43 OTHER_DETAILS: C-TERMINAL INCLUDES HIS-TAG SEQUENCE AS A PURIFICATION COMPND 44 TAG. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE O395; SOURCE 3 ORGANISM_TAXID: 345073; SOURCE 4 ATCC: 39541; SOURCE 5 GENE: NQRA, VC0395_A1884, VC395_2411; SOURCE 6 EXPRESSION_SYSTEM: VIBRIO CHOLERAE; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 666; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE O395; SOURCE 10 ORGANISM_TAXID: 345073; SOURCE 11 ATCC: 39541; SOURCE 12 GENE: NQRB, VC0395_A1883, VC395_2410; SOURCE 13 EXPRESSION_SYSTEM: VIBRIO CHOLERAE; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 666; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE O395; SOURCE 17 ORGANISM_TAXID: 345073; SOURCE 18 ATCC: 39541; SOURCE 19 GENE: NQRC, VC0395_A1882, VC395_2409; SOURCE 20 EXPRESSION_SYSTEM: VIBRIO CHOLERAE; SOURCE 21 EXPRESSION_SYSTEM_TAXID: 666; SOURCE 22 MOL_ID: 4; SOURCE 23 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE O395; SOURCE 24 ORGANISM_TAXID: 345073; SOURCE 25 ATCC: 39541; SOURCE 26 GENE: NQRD, VC0395_A1881, VC395_2408; SOURCE 27 EXPRESSION_SYSTEM: VIBRIO CHOLERAE; SOURCE 28 EXPRESSION_SYSTEM_TAXID: 666; SOURCE 29 MOL_ID: 5; SOURCE 30 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE O395; SOURCE 31 ORGANISM_TAXID: 345073; SOURCE 32 ATCC: 39541; SOURCE 33 GENE: NQRE, VC0395_A1880, VC395_2407; SOURCE 34 EXPRESSION_SYSTEM: VIBRIO CHOLERAE; SOURCE 35 EXPRESSION_SYSTEM_TAXID: 666; SOURCE 36 MOL_ID: 6; SOURCE 37 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE O395; SOURCE 38 ORGANISM_TAXID: 345073; SOURCE 39 ATCC: 39541; SOURCE 40 GENE: NQRF, VC0395_A1879, VC395_2406; SOURCE 41 EXPRESSION_SYSTEM: VIBRIO CHOLERAE; SOURCE 42 EXPRESSION_SYSTEM_TAXID: 666 KEYWDS NA+-NQR, NA+ PUMP, OXIDOREDUCTASE, INHIBITOR, MEMBRANE PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR M.ISHIKAWA-FUKUDA,J.KISHIKAWA,T.KATO,M.MURAI REVDAT 1 25-JUN-25 9UD5 0 JRNL AUTH M.ISHIKAWA-FUKUDA,T.SEKI,J.I.KISHIKAWA,M.TAKAHIRO, JRNL AUTH 2 K.I.OKAZAKI,T.KATO,B.BARQUERA,H.MIYOSHI,M.MURAI JRNL TITL THE NA + -PUMPING MECHANISM DRIVEN BY REDOX REACTIONS IN THE JRNL TITL 2 NADH-QUINONE OXIDOREDUCTASE FROM VIBRIO CHOLERAE RELIES ON JRNL TITL 3 DYNAMIC CONFORMATIONAL CHANGES. JRNL REF BIORXIV 2025 JRNL REFN ISSN 2692-8205 JRNL PMID 40501732 JRNL DOI 10.1101/2025.06.01.656757 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CRYOSPARC, SERIALEM, CRYOSPARC, COOT, REMARK 3 CRYOSPARC, CRYOSPARC, CRYOSPARC, REMARK 3 CRYOSPARC, PHENIX REMARK 3 RECONSTRUCTION SCHEMA : FOURIER SPACE REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 7XK7 REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : FLEXIBLE FIT REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.900 REMARK 3 NUMBER OF PARTICLES : 285018 REMARK 3 CTF CORRECTION METHOD : NONE REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9UD5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-APR-25. REMARK 100 THE DEPOSITION ID IS D_1300057826. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : NA(+)-TRANSLOCATING NADH REMARK 245 -QUINONE REDUCTASE REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 10.00 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 8.00 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 BIOQUANTUM (6K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 800.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 1800.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 0.11 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 6500.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 81000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 1 REMARK 465 LYS B 414 REMARK 465 GLN B 415 REMARK 465 MET C 1 REMARK 465 ALA C 2 REMARK 465 SER C 3 REMARK 465 ASN C 4 REMARK 465 ASN C 5 REMARK 465 ASN C 257 REMARK 465 MET D 1 REMARK 465 SER D 2 REMARK 465 SER D 3 REMARK 465 ALA D 4 REMARK 465 HIS F 409 REMARK 465 HIS F 410 REMARK 465 HIS F 411 REMARK 465 HIS F 412 REMARK 465 HIS F 413 REMARK 465 HIS F 414 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET E 1 CG SD CE REMARK 470 GLU E 2 CG CD OE1 OE2 REMARK 470 HIS E 3 CG ND1 CD2 CE1 NE2 REMARK 470 TYR E 4 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ILE E 5 CG1 CG2 CD1 REMARK 470 SER E 6 OG REMARK 470 LEU E 7 CG CD1 CD2 REMARK 470 LEU E 8 CG CD1 CD2 REMARK 470 VAL E 9 CG1 CG2 REMARK 470 LYS E 10 CG CD CE NZ REMARK 470 SER E 11 OG REMARK 470 ILE E 12 CG1 CG2 CD1 REMARK 470 PHE E 13 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ILE E 14 CG1 CG2 CD1 REMARK 470 GLU E 15 CG CD OE1 OE2 REMARK 470 ASN E 16 CG OD1 ND2 REMARK 470 MET E 17 CG SD CE REMARK 470 LEU E 19 CG CD1 CD2 REMARK 470 SER E 20 OG REMARK 470 PHE E 21 CG CD1 CD2 CE1 CE2 CZ REMARK 470 PHE E 22 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LEU E 23 CG CD1 CD2 REMARK 470 THR E 27 OG1 CG2 REMARK 470 PHE E 28 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LEU E 29 CG CD1 CD2 REMARK 470 VAL E 31 CG1 CG2 REMARK 470 SER E 32 OG REMARK 470 LYS E 33 CG CD CE NZ REMARK 470 LYS E 34 CG CD CE NZ REMARK 470 VAL E 35 CG1 CG2 REMARK 470 LYS E 36 CG CD CE NZ REMARK 470 THR E 37 OG1 CG2 REMARK 470 SER E 38 OG REMARK 470 PHE E 39 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LEU E 41 CG CD1 CD2 REMARK 470 ILE E 43 CG1 CG2 CD1 REMARK 470 VAL E 45 CG1 CG2 REMARK 470 ILE E 46 CG1 CG2 CD1 REMARK 470 VAL E 47 CG1 CG2 REMARK 470 VAL E 48 CG1 CG2 REMARK 470 LEU E 49 CG CD1 CD2 REMARK 470 THR E 50 OG1 CG2 REMARK 470 ILE E 51 CG1 CG2 CD1 REMARK 470 SER E 52 OG REMARK 470 VAL E 53 CG1 CG2 REMARK 470 PRO E 54 CG CD REMARK 470 VAL E 55 CG1 CG2 REMARK 470 ASN E 56 CG OD1 ND2 REMARK 470 ASN E 57 CG OD1 ND2 REMARK 470 LEU E 58 CG CD1 CD2 REMARK 470 VAL E 59 CG1 CG2 REMARK 470 TYR E 60 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASN E 61 CG OD1 ND2 REMARK 470 LEU E 62 CG CD1 CD2 REMARK 470 VAL E 63 CG1 CG2 REMARK 470 LEU E 64 CG CD1 CD2 REMARK 470 LYS E 65 CG CD CE NZ REMARK 470 PRO E 66 CG CD REMARK 470 ASP E 67 CG OD1 OD2 REMARK 470 LEU E 69 CG CD1 CD2 REMARK 470 VAL E 70 CG1 CG2 REMARK 470 GLU E 71 CG CD OE1 OE2 REMARK 470 VAL E 73 CG1 CG2 REMARK 470 ASP E 74 CG OD1 OD2 REMARK 470 LEU E 75 CG CD1 CD2 REMARK 470 SER E 76 OG REMARK 470 PHE E 77 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LEU E 78 CG CD1 CD2 REMARK 470 ASN E 79 CG OD1 ND2 REMARK 470 PHE E 80 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ILE E 81 CG1 CG2 CD1 REMARK 470 THR E 82 OG1 CG2 REMARK 470 PHE E 83 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ILE E 84 CG1 CG2 CD1 REMARK 470 VAL E 86 CG1 CG2 REMARK 470 ILE E 87 CG1 CG2 CD1 REMARK 470 LEU E 90 CG CD1 CD2 REMARK 470 VAL E 91 CG1 CG2 REMARK 470 GLN E 92 CG CD OE1 NE2 REMARK 470 ILE E 93 CG1 CG2 CD1 REMARK 470 LEU E 94 CG CD1 CD2 REMARK 470 GLU E 95 CG CD OE1 OE2 REMARK 470 MET E 96 CG SD CE REMARK 470 ILE E 97 CG1 CG2 CD1 REMARK 470 LEU E 98 CG CD1 CD2 REMARK 470 ASP E 99 CG OD1 OD2 REMARK 470 ARG E 100 CG CD NE CZ NH1 NH2 REMARK 470 PHE E 101 CG CD1 CD2 CE1 CE2 CZ REMARK 470 PHE E 102 CG CD1 CD2 CE1 CE2 CZ REMARK 470 PRO E 103 CG CD REMARK 470 PRO E 104 CG CD REMARK 470 LEU E 105 CG CD1 CD2 REMARK 470 TYR E 106 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASN E 107 CG OD1 ND2 REMARK 470 LEU E 109 CG CD1 CD2 REMARK 470 ILE E 111 CG1 CG2 CD1 REMARK 470 PHE E 112 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LEU E 113 CG CD1 CD2 REMARK 470 PRO E 114 CG CD REMARK 470 LEU E 115 CG CD1 CD2 REMARK 470 ILE E 116 CG1 CG2 CD1 REMARK 470 THR E 117 OG1 CG2 REMARK 470 VAL E 118 CG1 CG2 REMARK 470 ASN E 119 CG OD1 ND2 REMARK 470 CYS E 120 SG REMARK 470 ILE E 122 CG1 CG2 CD1 REMARK 470 PHE E 123 CG CD1 CD2 CE1 CE2 CZ REMARK 470 VAL E 126 CG1 CG2 REMARK 470 SER E 127 OG REMARK 470 PHE E 128 CG CD1 CD2 CE1 CE2 CZ REMARK 470 MET E 129 CG SD CE REMARK 470 VAL E 130 CG1 CG2 REMARK 470 GLN E 131 CG CD OE1 NE2 REMARK 470 ARG E 132 CG CD NE CZ NH1 NH2 REMARK 470 ASP E 133 CG OD1 OD2 REMARK 470 TYR E 134 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 SER E 135 OG REMARK 470 PHE E 136 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU E 138 CG CD OE1 OE2 REMARK 470 SER E 139 OG REMARK 470 VAL E 140 CG1 CG2 REMARK 470 VAL E 141 CG1 CG2 REMARK 470 TYR E 142 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 PHE E 144 CG CD1 CD2 CE1 CE2 CZ REMARK 470 SER E 146 OG REMARK 470 VAL E 148 CG1 CG2 REMARK 470 TRP E 150 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP E 150 CZ3 CH2 REMARK 470 MET E 151 CG SD CE REMARK 470 LEU E 152 CG CD1 CD2 REMARK 470 ILE E 154 CG1 CG2 CD1 REMARK 470 VAL E 155 CG1 CG2 REMARK 470 LEU E 157 CG CD1 CD2 REMARK 470 ILE E 160 CG1 CG2 CD1 REMARK 470 ARG E 161 CG CD NE CZ NH1 NH2 REMARK 470 GLU E 162 CG CD OE1 OE2 REMARK 470 LYS E 163 CG CD CE NZ REMARK 470 MET E 164 CG SD CE REMARK 470 LYS E 165 CG CD CE NZ REMARK 470 TYR E 166 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 SER E 167 OG REMARK 470 ASP E 168 CG OD1 OD2 REMARK 470 VAL E 169 CG1 CG2 REMARK 470 PRO E 170 CG CD REMARK 470 PRO E 171 CG CD REMARK 470 LEU E 173 CG CD1 CD2 REMARK 470 ARG E 174 CG CD NE CZ NH1 NH2 REMARK 470 LEU E 176 CG CD1 CD2 REMARK 470 ILE E 178 CG1 CG2 CD1 REMARK 470 THR E 179 OG1 CG2 REMARK 470 PHE E 180 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ILE E 181 CG1 CG2 CD1 REMARK 470 THR E 182 OG1 CG2 REMARK 470 LEU E 185 CG CD1 CD2 REMARK 470 MET E 186 CG SD CE REMARK 470 LEU E 188 CG CD1 CD2 REMARK 470 PHE E 190 CG CD1 CD2 CE1 CE2 CZ REMARK 470 MET E 191 CG SD CE REMARK 470 SER E 192 OG REMARK 470 PHE E 193 CG CD1 CD2 CE1 CE2 CZ REMARK 470 SER E 194 OG REMARK 470 VAL E 196 CG1 CG2 REMARK 470 GLN E 197 CG CD OE1 NE2 REMARK 470 LEU E 198 CG CD1 CD2 REMARK 470 LYS F 54 CG CD CE NZ REMARK 470 LYS F 132 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET E 25 CG - SD - CE ANGL. DEV. = 17.4 DEGREES REMARK 500 ASP F 273 CB - CG - OD1 ANGL. DEV. = 5.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 97 18.43 -140.81 REMARK 500 PHE A 136 -6.76 80.76 REMARK 500 PRO A 216 46.61 -92.60 REMARK 500 TYR A 228 79.80 -159.00 REMARK 500 HIS B 46 -8.81 -56.02 REMARK 500 LEU B 108 6.56 -69.98 REMARK 500 TYR B 412 28.77 -140.94 REMARK 500 GLN C 116 -11.86 74.73 REMARK 500 LEU D 23 -58.31 -123.04 REMARK 500 SER D 102 -129.21 59.57 REMARK 500 PHE E 22 62.11 60.89 REMARK 500 VAL E 63 -53.79 -125.24 REMARK 500 ASP E 99 44.09 -81.29 REMARK 500 ARG E 100 -159.28 -174.63 REMARK 500 PHE E 101 76.41 -67.26 REMARK 500 PHE E 102 -39.45 -176.12 REMARK 500 PRO E 103 102.86 -170.67 REMARK 500 ASN E 107 -96.93 2.06 REMARK 500 MET E 191 0.97 -65.69 REMARK 500 CYS F 79 58.16 -94.40 REMARK 500 GLU F 122 79.25 -100.76 REMARK 500 ASP F 156 46.06 32.60 REMARK 500 GLU F 220 75.25 -101.67 REMARK 500 LYS F 300 -1.90 70.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASN F 40 GLY F 41 121.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES D 302 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 29 SG REMARK 620 2 FES D 302 S1 114.8 REMARK 620 3 FES D 302 S2 107.9 104.2 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES D 302 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 112 SG REMARK 620 2 FES D 302 S1 102.1 REMARK 620 3 FES D 302 S2 114.1 104.3 REMARK 620 4 CYS E 26 SG 99.7 124.9 111.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES F 501 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS F 76 SG REMARK 620 2 FES F 501 S1 114.3 REMARK 620 3 FES F 501 S2 121.2 104.0 REMARK 620 4 CYS F 79 SG 107.4 107.9 100.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES F 501 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS F 111 SG REMARK 620 2 FES F 501 S1 94.8 REMARK 620 3 FES F 501 S2 105.5 104.0 REMARK 620 N 1 2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-64062 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF NA+-TRANSLOCATING NADH-UBIQUINONE REMARK 900 OXIDOREDUCTASE FROM VIBRIO CHOLERAE REDUCED BY NADH, WITH BOUND REMARK 900 KORORMICIN A DBREF 9UD5 A 1 446 UNP A5F5X1 NQRA_VIBC3 1 446 DBREF 9UD5 B 1 415 UNP A5F5X0 NQRB_VIBC3 1 415 DBREF 9UD5 C 1 257 UNP A5F5Y7 NQRC_VIBC3 1 257 DBREF 9UD5 D 1 210 UNP A5F5Y6 NQRD_VIBC3 1 210 DBREF 9UD5 E 1 198 UNP A5F5Y5 NQRE_VIBC3 1 198 DBREF 9UD5 F 1 408 UNP A5F5Y4 NQRF_VIBC3 1 408 SEQADV 9UD5 HIS F 409 UNP A5F5Y4 EXPRESSION TAG SEQADV 9UD5 HIS F 410 UNP A5F5Y4 EXPRESSION TAG SEQADV 9UD5 HIS F 411 UNP A5F5Y4 EXPRESSION TAG SEQADV 9UD5 HIS F 412 UNP A5F5Y4 EXPRESSION TAG SEQADV 9UD5 HIS F 413 UNP A5F5Y4 EXPRESSION TAG SEQADV 9UD5 HIS F 414 UNP A5F5Y4 EXPRESSION TAG SEQRES 1 A 446 MET ILE THR ILE LYS LYS GLY LEU ASP LEU PRO ILE ALA SEQRES 2 A 446 GLY THR PRO SER GLN VAL ILE SER ASP GLY LYS ALA ILE SEQRES 3 A 446 LYS LYS VAL ALA LEU LEU GLY GLU GLU TYR VAL GLY MET SEQRES 4 A 446 ARG PRO THR MET HIS VAL ARG VAL GLY ASP GLU VAL LYS SEQRES 5 A 446 LYS ALA GLN ILE LEU PHE GLU ASP LYS LYS ASN PRO GLY SEQRES 6 A 446 VAL LYS PHE THR SER PRO VAL SER GLY LYS VAL VAL GLU SEQRES 7 A 446 ILE ASN ARG GLY ALA LYS ARG VAL LEU GLN SER VAL VAL SEQRES 8 A 446 ILE GLU VAL ALA GLY ASP ASP GLN VAL THR PHE ASP LYS SEQRES 9 A 446 PHE GLU ALA ASN GLN LEU ALA SER LEU ASN ARG ASP ALA SEQRES 10 A 446 ILE LYS THR GLN LEU VAL GLU SER GLY LEU TRP THR ALA SEQRES 11 A 446 PHE ARG THR ARG PRO PHE SER LYS VAL PRO ALA ILE ASP SEQRES 12 A 446 SER THR SER GLU ALA ILE PHE VAL THR ALA MET ASP THR SEQRES 13 A 446 ASN PRO LEU ALA ALA GLU PRO THR VAL VAL ILE ASN GLU SEQRES 14 A 446 GLN SER GLU ALA PHE VAL ALA GLY LEU ASP VAL LEU SER SEQRES 15 A 446 ALA LEU THR THR GLY LYS VAL TYR VAL CYS LYS LYS GLY SEQRES 16 A 446 THR SER LEU PRO ARG SER GLN GLN PRO ASN VAL GLU GLU SEQRES 17 A 446 HIS VAL PHE ASP GLY PRO HIS PRO ALA GLY LEU ALA GLY SEQRES 18 A 446 THR HIS MET HIS PHE LEU TYR PRO VAL SER ALA ASP HIS SEQRES 19 A 446 VAL ALA TRP SER ILE ASN TYR GLN ASP VAL ILE ALA VAL SEQRES 20 A 446 GLY GLN LEU PHE LEU THR GLY GLU LEU TYR THR GLN ARG SEQRES 21 A 446 VAL VAL SER LEU ALA GLY PRO VAL VAL ASN LYS PRO ARG SEQRES 22 A 446 LEU VAL ARG THR VAL MET GLY ALA SER LEU GLU GLN LEU SEQRES 23 A 446 VAL ASP SER GLU ILE MET PRO GLY GLU VAL ARG ILE ILE SEQRES 24 A 446 SER GLY SER VAL LEU SER GLY THR LYS ALA THR GLY PRO SEQRES 25 A 446 HIS ALA TYR LEU GLY ARG TYR HIS LEU GLN VAL SER VAL SEQRES 26 A 446 LEU ARG GLU GLY ARG ASP LYS GLU LEU PHE GLY TRP ALA SEQRES 27 A 446 MET PRO GLY LYS ASN LYS PHE SER VAL THR ARG SER PHE SEQRES 28 A 446 LEU GLY HIS LEU PHE LYS GLY GLN VAL TYR ASN MET THR SEQRES 29 A 446 THR THR THR ASN GLY SER ASP ARG SER MET VAL PRO ILE SEQRES 30 A 446 GLY ASN TYR GLU LYS VAL MET PRO LEU ASP MET GLU PRO SEQRES 31 A 446 THR LEU LEU LEU ARG ASP LEU CYS ALA GLY ASP SER ASP SEQRES 32 A 446 SER ALA VAL ARG LEU GLY ALA LEU GLU LEU ASP GLU GLU SEQRES 33 A 446 ASP LEU ALA LEU CYS THR PHE VAL CYS PRO GLY LYS TYR SEQRES 34 A 446 GLU TYR GLY GLN LEU LEU ARG GLU CYS LEU ASP LYS ILE SEQRES 35 A 446 GLU LYS GLU GLY SEQRES 1 B 415 MET GLY LEU LYS LYS PHE LEU GLU ASP ILE GLU HIS HIS SEQRES 2 B 415 PHE GLU PRO GLY GLY LYS HIS GLU LYS TRP PHE ALA LEU SEQRES 3 B 415 TYR GLU ALA ALA ALA THR LEU PHE TYR THR PRO GLY LEU SEQRES 4 B 415 VAL THR LYS ARG SER SER HIS VAL ARG ASP SER VAL ASP SEQRES 5 B 415 LEU LYS ARG ILE MET ILE MET VAL TRP LEU ALA VAL PHE SEQRES 6 B 415 PRO ALA MET PHE TRP GLY MET TYR ASN ALA GLY GLY GLN SEQRES 7 B 415 ALA ILE ALA ALA LEU ASN HIS LEU TYR SER GLY ASP GLN SEQRES 8 B 415 LEU ALA ALA ILE VAL ALA GLY ASN TRP HIS TYR TRP LEU SEQRES 9 B 415 THR GLU MET LEU GLY GLY THR MET SER SER ASP ALA GLY SEQRES 10 B 415 TRP GLY SER LYS MET LEU LEU GLY ALA THR TYR PHE LEU SEQRES 11 B 415 PRO ILE TYR ALA THR VAL PHE ILE VAL GLY GLY PHE TRP SEQRES 12 B 415 GLU VAL LEU PHE CYS MET VAL ARG LYS HIS GLU VAL ASN SEQRES 13 B 415 GLU GLY PHE PHE VAL THR SER ILE LEU PHE ALA LEU ILE SEQRES 14 B 415 VAL PRO PRO THR LEU PRO LEU TRP GLN ALA ALA LEU GLY SEQRES 15 B 415 ILE THR PHE GLY VAL VAL VAL ALA LYS GLU VAL PHE GLY SEQRES 16 B 415 GLY THR GLY ARG ASN PHE LEU ASN PRO ALA LEU ALA GLY SEQRES 17 B 415 ARG ALA PHE LEU PHE PHE ALA TYR PRO ALA GLN ILE SER SEQRES 18 B 415 GLY ASP LEU VAL TRP THR ALA ALA ASP GLY TYR SER GLY SEQRES 19 B 415 ALA THR ALA LEU SER GLN TRP ALA GLN GLY GLY ALA GLY SEQRES 20 B 415 ALA LEU ILE ASN ASN ALA THR GLY GLN THR ILE THR TRP SEQRES 21 B 415 MET ASP ALA PHE ILE GLY ASN ILE PRO GLY SER ILE GLY SEQRES 22 B 415 GLU VAL SER THR LEU ALA LEU MET ILE GLY ALA ALA PHE SEQRES 23 B 415 ILE VAL TYR MET GLY ILE ALA SER TRP ARG ILE ILE GLY SEQRES 24 B 415 GLY VAL MET ILE GLY MET ILE LEU LEU SER THR LEU PHE SEQRES 25 B 415 ASN VAL ILE GLY SER ASP THR ASN ALA MET PHE ASN MET SEQRES 26 B 415 PRO TRP HIS TRP HIS LEU VAL LEU GLY GLY PHE ALA PHE SEQRES 27 B 415 GLY MET PHE PHE MET ALA THR ASP PRO VAL SER ALA SER SEQRES 28 B 415 PHE THR ASN SER GLY LYS TRP ALA TYR GLY ILE LEU ILE SEQRES 29 B 415 GLY VAL MET CYS VAL LEU ILE ARG VAL VAL ASN PRO ALA SEQRES 30 B 415 TYR PRO GLU GLY MET MET LEU ALA ILE LEU PHE ALA ASN SEQRES 31 B 415 LEU PHE ALA PRO LEU PHE ASP HIS VAL VAL VAL GLU ARG SEQRES 32 B 415 ASN ILE LYS ARG ARG LEU ALA ARG TYR GLY LYS GLN SEQRES 1 C 257 MET ALA SER ASN ASN ASP SER ILE LYS LYS THR LEU PHE SEQRES 2 C 257 VAL VAL ILE ALA LEU SER LEU VAL CYS SER ILE ILE VAL SEQRES 3 C 257 SER ALA ALA ALA VAL GLY LEU ARG ASP LYS GLN LYS GLU SEQRES 4 C 257 ASN ALA ALA LEU ASP LYS GLN SER LYS ILE LEU GLN VAL SEQRES 5 C 257 ALA GLY ILE GLU ALA LYS GLY SER LYS GLN ILE VAL GLU SEQRES 6 C 257 LEU PHE ASN LYS SER ILE GLU PRO ARG LEU VAL ASP PHE SEQRES 7 C 257 ASN THR GLY ASP PHE VAL GLU GLY ASP ALA ALA ASN TYR SEQRES 8 C 257 ASP GLN ARG LYS ALA ALA LYS GLU ALA SER GLU SER ILE SEQRES 9 C 257 LYS LEU THR ALA GLU GLN ASP LYS ALA LYS ILE GLN ARG SEQRES 10 C 257 ARG ALA ASN VAL GLY VAL VAL TYR LEU VAL LYS ASP GLY SEQRES 11 C 257 ASP LYS THR SER LYS VAL ILE LEU PRO VAL HIS GLY ASN SEQRES 12 C 257 GLY LEU TRP SER MET MET TYR ALA PHE VAL ALA VAL GLU SEQRES 13 C 257 THR ASP GLY ASN THR VAL SER GLY LEU THR TYR TYR GLU SEQRES 14 C 257 GLN GLY GLU THR PRO GLY LEU GLY GLY GLU VAL GLU ASN SEQRES 15 C 257 PRO ALA TRP ARG ALA GLN TRP VAL GLY LYS LYS LEU PHE SEQRES 16 C 257 ASP GLU ASN HIS LYS PRO ALA ILE LYS ILE VAL LYS GLY SEQRES 17 C 257 GLY ALA PRO GLN GLY SER GLU HIS GLY VAL ASP GLY LEU SEQRES 18 C 257 SER GLY ALA THR LEU THR SER ASN GLY VAL GLN ASN THR SEQRES 19 C 257 PHE ASP PHE TRP LEU GLY ASP MET GLY PHE GLY PRO PHE SEQRES 20 C 257 LEU THR LYS VAL ARG ASP GLY GLY LEU ASN SEQRES 1 D 210 MET SER SER ALA LYS GLU LEU LYS LYS SER VAL LEU ALA SEQRES 2 D 210 PRO VAL LEU ASP ASN ASN PRO ILE ALA LEU GLN VAL LEU SEQRES 3 D 210 GLY VAL CYS SER ALA LEU ALA VAL THR THR LYS LEU GLU SEQRES 4 D 210 THR ALA PHE VAL MET THR LEU ALA VAL MET PHE VAL THR SEQRES 5 D 210 ALA LEU SER ASN PHE PHE VAL SER LEU ILE ARG ASN HIS SEQRES 6 D 210 ILE PRO ASN SER VAL ARG ILE ILE VAL GLN MET ALA ILE SEQRES 7 D 210 ILE ALA SER LEU VAL ILE VAL VAL ASP GLN ILE LEU LYS SEQRES 8 D 210 ALA TYR LEU TYR ASP ILE SER LYS GLN LEU SER VAL PHE SEQRES 9 D 210 VAL GLY LEU ILE ILE THR ASN CYS ILE VAL MET GLY ARG SEQRES 10 D 210 ALA GLU ALA PHE ALA MET LYS SER GLU PRO ILE PRO SER SEQRES 11 D 210 PHE ILE ASP GLY ILE GLY ASN GLY LEU GLY TYR GLY PHE SEQRES 12 D 210 VAL LEU MET THR VAL GLY PHE PHE ARG GLU LEU LEU GLY SEQRES 13 D 210 SER GLY LYS LEU PHE GLY LEU GLU VAL LEU PRO LEU ILE SEQRES 14 D 210 SER ASN GLY GLY TRP TYR GLN PRO ASN GLY LEU MET LEU SEQRES 15 D 210 LEU ALA PRO SER ALA PHE PHE LEU ILE GLY PHE MET ILE SEQRES 16 D 210 TRP ALA ILE ARG THR PHE LYS PRO GLU GLN VAL GLU ALA SEQRES 17 D 210 LYS GLU SEQRES 1 E 198 MET GLU HIS TYR ILE SER LEU LEU VAL LYS SER ILE PHE SEQRES 2 E 198 ILE GLU ASN MET ALA LEU SER PHE PHE LEU GLY MET CYS SEQRES 3 E 198 THR PHE LEU ALA VAL SER LYS LYS VAL LYS THR SER PHE SEQRES 4 E 198 GLY LEU GLY ILE ALA VAL ILE VAL VAL LEU THR ILE SER SEQRES 5 E 198 VAL PRO VAL ASN ASN LEU VAL TYR ASN LEU VAL LEU LYS SEQRES 6 E 198 PRO ASP ALA LEU VAL GLU GLY VAL ASP LEU SER PHE LEU SEQRES 7 E 198 ASN PHE ILE THR PHE ILE GLY VAL ILE ALA ALA LEU VAL SEQRES 8 E 198 GLN ILE LEU GLU MET ILE LEU ASP ARG PHE PHE PRO PRO SEQRES 9 E 198 LEU TYR ASN ALA LEU GLY ILE PHE LEU PRO LEU ILE THR SEQRES 10 E 198 VAL ASN CYS ALA ILE PHE GLY GLY VAL SER PHE MET VAL SEQRES 11 E 198 GLN ARG ASP TYR SER PHE ALA GLU SER VAL VAL TYR GLY SEQRES 12 E 198 PHE GLY SER GLY VAL GLY TRP MET LEU ALA ILE VAL ALA SEQRES 13 E 198 LEU ALA GLY ILE ARG GLU LYS MET LYS TYR SER ASP VAL SEQRES 14 E 198 PRO PRO GLY LEU ARG GLY LEU GLY ILE THR PHE ILE THR SEQRES 15 E 198 ALA GLY LEU MET ALA LEU GLY PHE MET SER PHE SER GLY SEQRES 16 E 198 VAL GLN LEU SEQRES 1 F 414 MET SER THR ILE ILE PHE GLY VAL VAL MET PHE THR LEU SEQRES 2 F 414 ILE ILE LEU ALA LEU VAL LEU VAL ILE LEU PHE ALA LYS SEQRES 3 F 414 SER LYS LEU VAL PRO THR GLY ASP ILE THR ILE SER ILE SEQRES 4 F 414 ASN GLY ASP PRO GLU LYS ALA ILE VAL THR GLN PRO GLY SEQRES 5 F 414 GLY LYS LEU LEU THR ALA LEU ALA GLY ALA GLY VAL PHE SEQRES 6 F 414 VAL SER SER ALA CYS GLY GLY GLY GLY SER CYS GLY GLN SEQRES 7 F 414 CYS ARG VAL LYS ILE LYS SER GLY GLY GLY ASP ILE LEU SEQRES 8 F 414 PRO THR GLU LEU ASP HIS ILE SER LYS GLY GLU ALA ARG SEQRES 9 F 414 GLU GLY GLU ARG LEU ALA CYS GLN VAL ALA VAL LYS ALA SEQRES 10 F 414 ASP MET ASP LEU GLU LEU PRO GLU GLU ILE PHE GLY VAL SEQRES 11 F 414 LYS LYS TRP GLU CYS THR VAL ILE SER ASN ASP ASN LYS SEQRES 12 F 414 ALA THR PHE ILE LYS GLU LEU LYS LEU ALA ILE PRO ASP SEQRES 13 F 414 GLY GLU SER VAL PRO PHE ARG ALA GLY GLY TYR ILE GLN SEQRES 14 F 414 ILE GLU ALA PRO ALA HIS HIS VAL LYS TYR ALA ASP PHE SEQRES 15 F 414 ASP VAL PRO GLU LYS TYR ARG GLY ASP TRP ASP LYS PHE SEQRES 16 F 414 ASN LEU PHE ARG TYR GLU SER LYS VAL ASP GLU PRO ILE SEQRES 17 F 414 ILE ARG ALA TYR SER MET ALA ASN TYR PRO GLU GLU PHE SEQRES 18 F 414 GLY ILE ILE MET LEU ASN VAL ARG ILE ALA THR PRO PRO SEQRES 19 F 414 PRO ASN ASN PRO ASN VAL PRO PRO GLY GLN MET SER SER SEQRES 20 F 414 TYR ILE TRP SER LEU LYS ALA GLY ASP LYS CYS THR ILE SEQRES 21 F 414 SER GLY PRO PHE GLY GLU PHE PHE ALA LYS ASP THR ASP SEQRES 22 F 414 ALA GLU MET VAL PHE ILE GLY GLY GLY ALA GLY MET ALA SEQRES 23 F 414 PRO MET ARG SER HIS ILE PHE ASP GLN LEU LYS ARG LEU SEQRES 24 F 414 LYS SER LYS ARG LYS MET SER TYR TRP TYR GLY ALA ARG SEQRES 25 F 414 SER LYS ARG GLU MET PHE TYR VAL GLU ASP PHE ASP GLY SEQRES 26 F 414 LEU ALA ALA GLU ASN ASP ASN PHE VAL TRP HIS CYS ALA SEQRES 27 F 414 LEU SER ASP PRO GLN PRO GLU ASP ASN TRP THR GLY TYR SEQRES 28 F 414 THR GLY PHE ILE HIS ASN VAL LEU TYR GLU ASN TYR LEU SEQRES 29 F 414 LYS ASP HIS GLU ALA PRO GLU ASP CYS GLU TYR TYR MET SEQRES 30 F 414 CYS GLY PRO PRO MET MET ASN ALA ALA VAL ILE ASN MET SEQRES 31 F 414 LEU LYS ASN LEU GLY VAL GLU GLU GLU ASN ILE LEU LEU SEQRES 32 F 414 ASP ASP PHE GLY GLY HIS HIS HIS HIS HIS HIS HET FMN B 501 31 HET RBF B 502 27 HET IQT B 503 31 HET LMT B 504 35 HET CA C 301 1 HET FMN C 302 31 HET LMT D 301 35 HET FES D 302 4 HET FES F 501 4 HET FAD F 502 53 HETNAM FMN FLAVIN MONONUCLEOTIDE HETNAM RBF RIBOFLAVIN HETNAM IQT KORORMICIN HETNAM LMT DODECYL-BETA-D-MALTOSIDE HETNAM CA CALCIUM ION HETNAM FES FE2/S2 (INORGANIC) CLUSTER HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETSYN FMN RIBOFLAVIN MONOPHOSPHATE HETSYN RBF RIBOFLAVINE; VITAMIN B2 FORMUL 7 FMN 2(C17 H21 N4 O9 P) FORMUL 8 RBF C17 H20 N4 O6 FORMUL 9 IQT C25 H39 N O5 FORMUL 10 LMT 2(C24 H46 O11) FORMUL 11 CA CA 2+ FORMUL 14 FES 2(FE2 S2) FORMUL 16 FAD C27 H33 N9 O15 P2 FORMUL 17 HOH *37(H2 O) HELIX 1 AA1 GLU A 34 TYR A 36 5 3 HELIX 2 AA2 ALA A 83 ARG A 85 5 3 HELIX 3 AA3 GLU A 106 LEU A 113 5 8 HELIX 4 AA4 ASN A 114 SER A 125 1 12 HELIX 5 AA5 GLY A 126 PHE A 131 5 6 HELIX 6 AA6 GLU A 162 GLN A 170 1 9 HELIX 7 AA7 GLN A 170 THR A 185 1 16 HELIX 8 AA8 LEU A 219 TYR A 228 1 10 HELIX 9 AA9 TYR A 241 GLY A 254 1 14 HELIX 10 AB1 SER A 282 VAL A 287 1 6 HELIX 11 AB2 THR A 310 ALA A 314 5 5 HELIX 12 AB3 PHE A 335 MET A 339 5 5 HELIX 13 AB4 PHE A 351 PHE A 356 5 6 HELIX 14 AB5 ASN A 379 VAL A 383 5 5 HELIX 15 AB6 GLU A 389 GLY A 400 1 12 HELIX 16 AB7 ASP A 401 GLY A 409 1 9 HELIX 17 AB8 ALA A 410 LEU A 413 5 4 HELIX 18 AB9 ASP A 414 ASP A 417 5 4 HELIX 19 AC1 LEU A 418 VAL A 424 1 7 HELIX 20 AC2 GLU A 430 GLY A 446 1 17 HELIX 21 AC3 LEU B 3 ILE B 10 1 8 HELIX 22 AC4 GLU B 11 PHE B 14 5 4 HELIX 23 AC5 HIS B 20 LYS B 22 5 3 HELIX 24 AC6 TRP B 23 TYR B 35 1 13 HELIX 25 AC7 ASP B 52 VAL B 64 1 13 HELIX 26 AC8 VAL B 64 TYR B 87 1 24 HELIX 27 AC9 GLY B 89 ASN B 99 1 11 HELIX 28 AD1 ASN B 99 LEU B 108 1 10 HELIX 29 AD2 GLY B 117 ARG B 151 1 35 HELIX 30 AD3 GLY B 158 ILE B 169 1 12 HELIX 31 AD4 PRO B 175 VAL B 189 1 15 HELIX 32 AD5 LYS B 191 GLY B 195 5 5 HELIX 33 AD6 ASN B 203 TYR B 216 1 14 HELIX 34 AD7 PRO B 217 ILE B 220 5 4 HELIX 35 AD8 THR B 236 GLY B 245 1 10 HELIX 36 AD9 ALA B 246 ALA B 248 5 3 HELIX 37 AE1 THR B 259 GLY B 266 1 8 HELIX 38 AE2 SER B 276 MET B 290 1 15 HELIX 39 AE3 SER B 294 GLY B 316 1 23 HELIX 40 AE4 ASN B 320 MET B 325 5 6 HELIX 41 AE5 PRO B 326 LEU B 331 1 6 HELIX 42 AE6 GLY B 335 MET B 343 1 9 HELIX 43 AE7 THR B 353 ASN B 375 1 23 HELIX 44 AE8 GLY B 381 ALA B 410 1 30 HELIX 45 AE9 SER C 7 LEU C 33 1 27 HELIX 46 AF1 LEU C 33 ALA C 53 1 21 HELIX 47 AF2 GLY C 59 SER C 70 1 12 HELIX 48 AF3 ASP C 87 TYR C 91 5 5 HELIX 49 AF4 ASP C 92 ALA C 97 1 6 HELIX 50 AF5 GLY C 177 GLU C 181 5 5 HELIX 51 AF6 ASN C 182 ALA C 187 1 6 HELIX 52 AF7 GLN C 188 VAL C 190 5 3 HELIX 53 AF8 ALA C 224 LEU C 239 1 16 HELIX 54 AF9 PHE C 244 GLY C 254 1 11 HELIX 55 AG1 GLU D 6 ASP D 17 1 12 HELIX 56 AG2 GLY D 27 VAL D 34 1 8 HELIX 57 AG3 LYS D 37 ILE D 62 1 26 HELIX 58 AG4 VAL D 70 LEU D 94 1 25 HELIX 59 AG5 LEU D 94 SER D 102 1 9 HELIX 60 AG6 VAL D 103 ILE D 109 5 7 HELIX 61 AG7 ASN D 111 PHE D 121 1 11 HELIX 62 AG8 ALA D 122 SER D 125 5 4 HELIX 63 AG9 GLU D 126 GLY D 158 1 33 HELIX 64 AH1 ASN D 178 LEU D 183 5 6 HELIX 65 AH2 ALA D 184 LYS D 202 1 19 HELIX 66 AH3 PRO D 203 VAL D 206 5 4 HELIX 67 AH4 GLU E 2 PHE E 13 1 12 HELIX 68 AH5 GLY E 24 VAL E 31 1 8 HELIX 69 AH6 LYS E 34 VAL E 63 1 30 HELIX 70 AH7 LEU E 75 PHE E 77 5 3 HELIX 71 AH8 LEU E 78 ASP E 99 1 22 HELIX 72 AH9 LEU E 105 GLY E 110 1 6 HELIX 73 AI1 ILE E 111 ILE E 116 1 6 HELIX 74 AI2 ASN E 119 ASP E 133 1 15 HELIX 75 AI3 SER E 135 MET E 164 1 30 HELIX 76 AI4 LYS E 165 SER E 167 5 3 HELIX 77 AI5 GLY E 175 MET E 191 1 17 HELIX 78 AI6 SER E 192 SER E 194 5 3 HELIX 79 AI7 SER F 2 VAL F 30 1 29 HELIX 80 AI8 LYS F 54 ALA F 62 1 9 HELIX 81 AI9 LEU F 91 HIS F 97 5 7 HELIX 82 AJ1 SER F 99 ARG F 104 1 6 HELIX 83 AJ2 GLU F 126 VAL F 130 5 5 HELIX 84 AJ3 ALA F 180 PHE F 182 5 3 HELIX 85 AJ4 PRO F 185 GLY F 190 1 6 HELIX 86 AJ5 ASP F 191 LYS F 194 5 4 HELIX 87 AJ6 ASN F 196 ARG F 199 5 4 HELIX 88 AJ7 GLY F 243 LEU F 252 1 10 HELIX 89 AJ8 GLY F 284 ARG F 298 1 15 HELIX 90 AJ9 SER F 313 MET F 317 5 5 HELIX 91 AK1 TYR F 319 ASN F 330 1 12 HELIX 92 AK2 PHE F 354 TYR F 363 1 10 HELIX 93 AK3 LEU F 364 HIS F 367 5 4 HELIX 94 AK4 ALA F 369 CYS F 373 5 5 HELIX 95 AK5 PRO F 380 LEU F 394 1 15 HELIX 96 AK6 GLU F 397 GLU F 399 5 3 SHEET 1 AA1 6 ILE A 2 THR A 3 0 SHEET 2 AA1 6 VAL A 206 ASP A 212 1 O ASP A 212 N ILE A 2 SHEET 3 AA1 6 LYS A 188 LYS A 193 1 N VAL A 191 O GLU A 207 SHEET 4 AA1 6 ALA A 148 THR A 152 1 N VAL A 151 O TYR A 190 SHEET 5 AA1 6 ALA A 236 ASN A 240 1 O TRP A 237 N PHE A 150 SHEET 6 AA1 6 ARG A 132 ARG A 134 -1 N ARG A 134 O ALA A 236 SHEET 1 AA2 6 SER A 17 ASP A 22 0 SHEET 2 AA2 6 ARG A 273 VAL A 278 1 O ARG A 276 N SER A 21 SHEET 3 AA2 6 GLN A 259 ALA A 265 -1 N VAL A 262 O VAL A 275 SHEET 4 AA2 6 GLN A 322 ARG A 327 1 O VAL A 323 N SER A 263 SHEET 5 AA2 6 VAL A 296 GLY A 301 -1 N ARG A 297 O LEU A 326 SHEET 6 AA2 6 GLY A 306 LYS A 308 -1 O THR A 307 N SER A 300 SHEET 1 AA3 4 LYS A 28 LEU A 32 0 SHEET 2 AA3 4 LEU A 87 VAL A 94 -1 O ILE A 92 N VAL A 29 SHEET 3 AA3 4 GLY A 74 ARG A 81 -1 N LYS A 75 O GLU A 93 SHEET 4 AA3 4 GLU A 50 VAL A 51 -1 N VAL A 51 O GLY A 74 SHEET 1 AA4 3 PRO A 41 MET A 43 0 SHEET 2 AA4 3 ILE A 56 ASP A 60 -1 O GLU A 59 N THR A 42 SHEET 3 AA4 3 LYS A 67 THR A 69 -1 O PHE A 68 N LEU A 57 SHEET 1 AA5 2 ILE B 250 ASN B 251 0 SHEET 2 AA5 2 GLN B 256 THR B 257 -1 O GLN B 256 N ASN B 251 SHEET 1 AA6 6 ASP C 82 VAL C 84 0 SHEET 2 AA6 6 ILE C 71 ASP C 77 -1 N ASP C 77 O ASP C 82 SHEET 3 AA6 6 VAL C 121 ASP C 129 -1 O GLY C 122 N VAL C 76 SHEET 4 AA6 6 LYS C 132 ASN C 143 -1 O LYS C 135 N VAL C 127 SHEET 5 AA6 6 MET C 148 GLU C 156 -1 O VAL C 153 N LEU C 138 SHEET 6 AA6 6 VAL C 162 GLU C 169 -1 O SER C 163 N ALA C 154 SHEET 1 AA7 2 SER C 103 LYS C 105 0 SHEET 2 AA7 2 ARG C 117 ALA C 119 -1 O ARG C 118 N ILE C 104 SHEET 1 AA8 2 LYS C 204 VAL C 206 0 SHEET 2 AA8 2 GLY C 217 ASP C 219 1 O VAL C 218 N VAL C 206 SHEET 1 AA9 2 LYS D 159 LEU D 160 0 SHEET 2 AA9 2 LEU D 163 GLU D 164 -1 O LEU D 163 N LEU D 160 SHEET 1 AB1 5 ILE F 47 THR F 49 0 SHEET 2 AB1 5 ILE F 35 ILE F 39 -1 N ILE F 37 O ILE F 47 SHEET 3 AB1 5 ASP F 120 GLU F 122 1 O LEU F 121 N SER F 38 SHEET 4 AB1 5 ARG F 80 SER F 85 -1 N LYS F 82 O GLU F 122 SHEET 5 AB1 5 GLU F 107 LEU F 109 -1 O ARG F 108 N VAL F 81 SHEET 1 AB2 6 ILE F 208 SER F 213 0 SHEET 2 AB2 6 TYR F 167 ALA F 172 -1 N ILE F 170 O ARG F 210 SHEET 3 AB2 6 LYS F 257 PHE F 264 -1 O SER F 261 N GLN F 169 SHEET 4 AB2 6 LYS F 132 ASN F 142 -1 N CYS F 135 O CYS F 258 SHEET 5 AB2 6 ILE F 147 ALA F 153 -1 O LYS F 151 N SER F 139 SHEET 6 AB2 6 ILE F 223 ARG F 229 -1 O VAL F 228 N LYS F 148 SHEET 1 AB3 2 HIS F 176 LYS F 178 0 SHEET 2 AB3 2 GLU F 201 LYS F 203 -1 O SER F 202 N VAL F 177 SHEET 1 AB4 6 TYR F 351 THR F 352 0 SHEET 2 AB4 6 TRP F 335 LEU F 339 1 N LEU F 339 O TYR F 351 SHEET 3 AB4 6 MET F 305 ALA F 311 1 N TYR F 307 O HIS F 336 SHEET 4 AB4 6 MET F 276 GLY F 281 1 N PHE F 278 O SER F 306 SHEET 5 AB4 6 GLU F 374 CYS F 378 1 O GLU F 374 N VAL F 277 SHEET 6 AB4 6 ILE F 401 LEU F 403 1 O LEU F 402 N TYR F 375 LINK SG CYS D 29 FE2 FES D 302 1555 1555 2.31 LINK SG CYS D 112 FE1 FES D 302 1555 1555 2.29 LINK FE1 FES D 302 SG CYS E 26 1555 1555 2.29 LINK SG CYS F 76 FE2 FES F 501 1555 1555 2.31 LINK SG CYS F 79 FE2 FES F 501 1555 1555 2.32 LINK SG CYS F 111 FE1 FES F 501 1555 1555 2.31 CISPEP 1 ARG A 134 PRO A 135 0 6.74 CISPEP 2 HIS A 215 PRO A 216 0 7.04 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 CONECT 868314406 CONECT 932214405 CONECT1021214405 CONECT1157914410 CONECT1159814410 CONECT1183714409 CONECT142141421514231 CONECT14215142141421614217 CONECT1421614215 CONECT142171421514218 CONECT14218142171421914220 CONECT1421914218 CONECT14220142181422114231 CONECT142211422014222 CONECT14222142211422314229 CONECT142231422214224 CONECT14224142231422514226 CONECT1422514224 CONECT14226142241422714228 CONECT1422714226 CONECT142281422614229 CONECT14229142221422814230 CONECT14230142291423114232 CONECT14231142141422014230 CONECT142321423014233 CONECT14233142321423414235 CONECT1423414233 CONECT14235142331423614237 CONECT1423614235 CONECT14237142351423814239 CONECT1423814237 CONECT142391423714240 CONECT142401423914241 CONECT1424114240142421424314244 CONECT1424214241 CONECT1424314241 CONECT1424414241 CONECT142451424614262 CONECT14246142451424714248 CONECT1424714246 CONECT142481424614249 CONECT14249142481425014251 CONECT1425014249 CONECT14251142491425214262 CONECT142521425114253 CONECT14253142521425414260 CONECT142541425314255 CONECT14255142541425614257 CONECT1425614255 CONECT14257142551425814259 CONECT1425814257 CONECT142591425714260 CONECT14260142531425914261 CONECT14261142601426214263 CONECT14262142451425114261 CONECT142631426114264 CONECT14264142631426514266 CONECT1426514264 CONECT14266142641426714268 CONECT1426714266 CONECT14268142661426914270 CONECT1426914268 CONECT142701426814271 CONECT1427114270 CONECT142721427314295 CONECT142731427214274 CONECT142741427314275 CONECT142751427414276 CONECT14276142751427714296 CONECT14277142761427814296 CONECT142781427714279 CONECT142791427814280 CONECT142801427914297 CONECT1428114282 CONECT14282142811428314289 CONECT142831428214284 CONECT1428414283142851428614288 CONECT1428514284 CONECT142861428414287 CONECT1428714286 CONECT142881428414289 CONECT14289142821428814290 CONECT142901428914291 CONECT14291142901429214302 CONECT142921429114293 CONECT14293142921429414295 CONECT1429414293 CONECT142951427214293 CONECT142961427614277 CONECT142971428014298 CONECT142981429714299 CONECT142991429814300 CONECT143001429914301 CONECT1430114300 CONECT1430214291 CONECT14303143041430914313 CONECT14304143031430514310 CONECT14305143041430614311 CONECT14306143051430714312 CONECT14307143061430814313 CONECT143081430714314 CONECT143091430314318 CONECT1431014304 CONECT1431114305 CONECT1431214306 CONECT143131430314307 CONECT1431414308 CONECT14315143161432114324 CONECT14316143151431714322 CONECT14317143161431814323 CONECT14318143091431714319 CONECT14319143181432014324 CONECT143201431914325 CONECT143211431514326 CONECT1432214316 CONECT1432314317 CONECT143241431514319 CONECT1432514320 CONECT143261432114327 CONECT143271432614328 CONECT143281432714329 CONECT143291432814330 CONECT143301432914331 CONECT143311433014332 CONECT143321433114333 CONECT143331433214334 CONECT143341433314335 CONECT143351433414336 CONECT143361433514337 CONECT1433714336 CONECT143391434014356 CONECT14340143391434114342 CONECT1434114340 CONECT143421434014343 CONECT14343143421434414345 CONECT1434414343 CONECT14345143431434614356 CONECT143461434514347 CONECT14347143461434814354 CONECT143481434714349 CONECT14349143481435014351 CONECT1435014349 CONECT14351143491435214353 CONECT1435214351 CONECT143531435114354 CONECT14354143471435314355 CONECT14355143541435614357 CONECT14356143391434514355 CONECT143571435514358 CONECT14358143571435914360 CONECT1435914358 CONECT14360143581436114362 CONECT1436114360 CONECT14362143601436314364 CONECT1436314362 CONECT143641436214365 CONECT143651436414366 CONECT1436614365143671436814369 CONECT1436714366 CONECT1436814366 CONECT1436914366 CONECT14370143711437614380 CONECT14371143701437214377 CONECT14372143711437314378 CONECT14373143721437414379 CONECT14374143731437514380 CONECT143751437414381 CONECT143761437014385 CONECT1437714371 CONECT1437814372 CONECT1437914373 CONECT143801437014374 CONECT1438114375 CONECT14382143831438814391 CONECT14383143821438414389 CONECT14384143831438514390 CONECT14385143761438414386 CONECT14386143851438714391 CONECT143871438614392 CONECT143881438214393 CONECT1438914383 CONECT1439014384 CONECT143911438214386 CONECT1439214387 CONECT143931438814394 CONECT143941439314395 CONECT143951439414396 CONECT143961439514397 CONECT143971439614398 CONECT143981439714399 CONECT143991439814400 CONECT144001439914401 CONECT144011440014402 CONECT144021440114403 CONECT144031440214404 CONECT1440414403 CONECT14405 9322102121440714408 CONECT14406 86831440714408 CONECT144071440514406 CONECT144081440514406 CONECT14409118371441114412 CONECT1441011579115981441114412 CONECT144111440914410 CONECT144121440914410 CONECT1441314414144151441614465 CONECT1441414413 CONECT1441514413 CONECT144161441314417 CONECT144171441614418 CONECT14418144171441914420 CONECT144191441814424 CONECT14420144181442114422 CONECT1442114420 CONECT14422144201442314424 CONECT1442314422 CONECT14424144191442214425 CONECT14425144241442614434 CONECT144261442514427 CONECT144271442614428 CONECT14428144271442914434 CONECT14429144281443014431 CONECT1443014429 CONECT144311442914432 CONECT144321443114433 CONECT144331443214434 CONECT14434144251442814433 CONECT144351443614452 CONECT14436144351443714438 CONECT1443714436 CONECT144381443614439 CONECT14439144381444014441 CONECT1444014439 CONECT14441144391444214452 CONECT144421444114443 CONECT14443144421444414450 CONECT144441444314445 CONECT14445144441444614447 CONECT1444614445 CONECT14447144451444814449 CONECT1444814447 CONECT144491444714450 CONECT14450144431444914451 CONECT14451144501445214453 CONECT14452144351444114451 CONECT144531445114454 CONECT14454144531445514456 CONECT1445514454 CONECT14456144541445714458 CONECT1445714456 CONECT14458144561445914460 CONECT1445914458 CONECT144601445814461 CONECT144611446014462 CONECT1446214461144631446414465 CONECT1446314462 CONECT1446414462 CONECT144651441314462 MASTER 411 0 10 96 52 0 0 614496 6 257 152 END