HEADER LIGASE 16-APR-25 9UIV TITLE PLASMODIUM VIVAX CYTOPLASMIC PHENYLALANYL-TRNA SYNTHETASE IN COMPLEX TITLE 2 WITH PHENYLALANINE IN SPACE GROUP P21212 AT 2.19 A COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHENYLALANINE--TRNA LIGASE ALPHA SUBUNIT; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PHENYLALANINE TRNA-SYNTHETASE ALPHA SUBUNIT,FRS,PHERS, COMPND 5 PHENYLALANYL-TRNA SYNTHETASE ALPHA SUBUNIT; COMPND 6 EC: 6.1.1.20; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: PHENYLALANINE--TRNA LIGASE BETA SUBUNIT; COMPND 10 CHAIN: B; COMPND 11 SYNONYM: PHENYLALANINE TRNA-SYNTHETASE BETA SUBUNIT,FRS,PHERS, COMPND 12 PHENYLALANYL-TRNA SYNTHETASE BETA SUBUNIT; COMPND 13 EC: 6.1.1.20; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLASMODIUM VIVAX; SOURCE 3 ORGANISM_COMMON: MALARIA PARASITE P. VIVAX; SOURCE 4 ORGANISM_TAXID: 5855; SOURCE 5 GENE: PVX_081300; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: PLASMODIUM VIVAX; SOURCE 10 ORGANISM_COMMON: MALARIA PARASITE P. VIVAX; SOURCE 11 ORGANISM_TAXID: 5855; SOURCE 12 GENE: PVX_090880; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS AMINOACYLATION, AMINOACYL-TRNA SYNTHETASE, TRNA-BINDING, ATP-BINDING, KEYWDS 2 L-PHE, AUXILIARY POCKET, HETEROTETRAMERIC, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR N.MUTHARASAPPAN,Y.MANICKAM,A.SHARMA REVDAT 1 04-NOV-26 9UIV 0 JRNL AUTH N.MUTHARASAPPAN,Y.MANICKAM,A.SHARMA JRNL TITL PLASMODIUM VIVAX PHENYLALANYL-TRNA SYNTHETASE IN COMPLEX JRNL TITL 2 WITH L-PHE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.19 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.21.2_5419: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.19 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 63.11 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 3 NUMBER OF REFLECTIONS : 62433 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.220 REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.940 REMARK 3 FREE R VALUE TEST SET COUNT : 3082 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 63.1100 - 6.1200 1.00 2972 164 0.1873 0.2351 REMARK 3 2 6.1200 - 4.8600 1.00 2828 158 0.1921 0.2142 REMARK 3 3 4.8600 - 4.2500 1.00 2811 152 0.1556 0.2176 REMARK 3 4 4.2400 - 3.8600 0.99 2765 149 0.1804 0.1955 REMARK 3 5 3.8600 - 3.5800 1.00 2782 133 0.2130 0.2989 REMARK 3 6 3.5800 - 3.3700 1.00 2740 155 0.2412 0.2804 REMARK 3 7 3.3700 - 3.2000 0.99 2740 160 0.2348 0.2581 REMARK 3 8 3.2000 - 3.0600 0.99 2740 142 0.2497 0.2640 REMARK 3 9 3.0600 - 2.9400 0.99 2724 131 0.2580 0.2964 REMARK 3 10 2.9400 - 2.8400 0.99 2736 141 0.2771 0.3128 REMARK 3 11 2.8400 - 2.7500 0.99 2746 139 0.3018 0.3181 REMARK 3 12 2.7500 - 2.6700 0.99 2712 141 0.2914 0.3264 REMARK 3 13 2.6700 - 2.6000 0.98 2704 146 0.2726 0.2840 REMARK 3 14 2.6000 - 2.5400 0.99 2695 135 0.2695 0.3019 REMARK 3 15 2.5400 - 2.4800 0.99 2727 134 0.2672 0.2735 REMARK 3 16 2.4800 - 2.4300 0.98 2692 128 0.2890 0.3314 REMARK 3 17 2.4300 - 2.3800 0.99 2743 125 0.2899 0.3377 REMARK 3 18 2.3800 - 2.3400 0.98 2666 137 0.2948 0.3541 REMARK 3 19 2.3400 - 2.2900 0.98 2661 152 0.3171 0.3364 REMARK 3 20 2.2900 - 2.2600 0.97 2640 133 0.3328 0.3716 REMARK 3 21 2.2600 - 2.2200 0.85 2329 116 0.3569 0.3851 REMARK 3 22 2.2200 - 2.1900 0.81 2198 111 0.3908 0.4572 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.350 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.720 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 7554 REMARK 3 ANGLE : 0.626 10224 REMARK 3 CHIRALITY : 0.048 1141 REMARK 3 PLANARITY : 0.004 1309 REMARK 3 DIHEDRAL : 18.091 2768 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -22.0601 3.4053 -24.6972 REMARK 3 T TENSOR REMARK 3 T11: 0.4780 T22: 0.4089 REMARK 3 T33: 0.4787 T12: 0.0722 REMARK 3 T13: -0.0609 T23: -0.0621 REMARK 3 L TENSOR REMARK 3 L11: 1.7461 L22: 1.1830 REMARK 3 L33: 0.4756 L12: -1.2871 REMARK 3 L13: 0.4058 L23: -0.4990 REMARK 3 S TENSOR REMARK 3 S11: 0.2815 S12: 0.3371 S13: -0.2668 REMARK 3 S21: -0.2017 S22: -0.2045 S23: 0.2733 REMARK 3 S31: 0.0534 S32: -0.1032 S33: -0.0823 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9UIV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-APR-25. REMARK 100 THE DEPOSITION ID IS D_1300055751. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-NOV-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97625 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : AUTOPROC REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 63432 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.190 REMARK 200 RESOLUTION RANGE LOW (A) : 120.930 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 13.80 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.19 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.22 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : 14.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 7BY6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.57 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.83 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M AMMONIUM TARTRATE DIBASIC PH REMARK 280 7.0, 12% W/V POLYETHYLENE GLYCOL 3,350 (PEG ION G5), VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 68.12050 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.99350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 68.12050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.99350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 25120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 71780 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -223.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 0 REMARK 465 GLY B 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 277 CG CD CE NZ REMARK 470 GLU A 279 CG CD OE1 OE2 REMARK 470 LYS A 282 CG CD CE NZ REMARK 470 LEU A 352 CG CD1 CD2 REMARK 470 LYS A 398 CG CD CE NZ REMARK 470 GLU A 423 CG CD OE1 OE2 REMARK 470 ASP A 448 CG OD1 OD2 REMARK 470 TYR A 507 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 HIS A 508 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 510 CG CD OE1 OE2 REMARK 470 ASN A 511 CG OD1 ND2 REMARK 470 LYS A 513 CG CD CE NZ REMARK 470 LEU A 515 CG CD1 CD2 REMARK 470 ARG A 557 CG CD NE CZ NH1 NH2 REMARK 470 VAL A 568 CG1 CG2 REMARK 470 GLU B 9 CG CD OE1 OE2 REMARK 470 LEU B 11 CG CD1 CD2 REMARK 470 ILE B 12 CG1 CG2 CD1 REMARK 470 LYS B 14 CG CD CE NZ REMARK 470 GLU B 20 CG CD OE1 OE2 REMARK 470 LYS B 41 CG CD CE NZ REMARK 470 GLU B 43 CG CD OE1 OE2 REMARK 470 LYS B 44 CG CD CE NZ REMARK 470 LYS B 69 CG CD CE NZ REMARK 470 ASN B 85 CG OD1 ND2 REMARK 470 SER B 86 OG REMARK 470 GLU B 88 CG CD OE1 OE2 REMARK 470 VAL B 91 CG1 CG2 REMARK 470 LYS B 92 CG CD CE NZ REMARK 470 GLU B 93 CG CD OE1 OE2 REMARK 470 LYS B 94 CG CD CE NZ REMARK 470 GLU B 105 CG CD OE1 OE2 REMARK 470 LYS B 116 CG CD CE NZ REMARK 470 LYS B 119 CG CD CE NZ REMARK 470 LYS B 201 CG CD CE NZ REMARK 470 ARG B 238 CG CD NE CZ NH1 NH2 REMARK 470 SER B 264 OG REMARK 470 LYS B 270 CG CD CE NZ REMARK 470 SER B 272 OG REMARK 470 LYS B 282 CG CD CE NZ REMARK 470 ASN B 283 CG OD1 ND2 REMARK 470 LYS B 285 CG CD CE NZ REMARK 470 LYS B 288 CG CD CE NZ REMARK 470 ASN B 290 CG OD1 ND2 REMARK 470 LYS B 298 CG CD CE NZ REMARK 470 LYS B 311 CG CD CE NZ REMARK 470 ILE B 315 CG1 CG2 CD1 REMARK 470 LEU B 316 CG CD1 CD2 REMARK 470 ASN B 317 CG OD1 ND2 REMARK 470 SER B 319 OG REMARK 470 VAL B 320 CG1 CG2 REMARK 470 LYS B 321 CG CD CE NZ REMARK 470 ASP B 322 CG OD1 OD2 REMARK 470 LYS B 335 CG CD CE NZ REMARK 470 ILE B 337 CG1 CG2 CD1 REMARK 470 LYS B 382 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 338 -59.38 -135.97 REMARK 500 GLU A 367 65.31 -101.20 REMARK 500 ASN A 392 70.85 56.98 REMARK 500 GLU A 499 109.74 -162.47 REMARK 500 HIS A 508 -63.20 -103.60 REMARK 500 GLU A 509 -158.04 -162.86 REMARK 500 GLU A 510 71.11 53.13 REMARK 500 ASP B 104 -145.21 -93.98 REMARK 500 ARG B 107 65.70 -166.26 REMARK 500 ASN B 138 -73.11 -99.35 REMARK 500 ASP B 214 -169.03 -79.42 REMARK 500 PRO B 224 33.90 -94.06 REMARK 500 ILE B 225 -64.32 -98.26 REMARK 500 PHE B 297 57.73 -105.47 REMARK 500 TYR B 416 -67.08 -121.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 701 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 499 OE2 REMARK 620 2 GLU B 361 OE1 63.1 REMARK 620 N 1 DBREF 9UIV A 266 569 UNP A5K9S0 SYFA_PLAVS 266 569 DBREF 9UIV B 2 617 UNP A5K464 SYFB_PLAVS 2 617 SEQADV 9UIV MET B 0 UNP A5K464 INITIATING METHIONINE SEQADV 9UIV GLY B 1 UNP A5K464 EXPRESSION TAG SEQRES 1 A 304 LYS GLN ILE THR ASP LEU THR TYR LEU LEU ILE LYS ASN SEQRES 2 A 304 GLU GLU TYR LYS LYS TYR GLN VAL LYS LYS TYR ASN PHE SEQRES 3 A 304 PHE SER SER GLY LYS LYS MET ASN LYS GLY ASN ILE HIS SEQRES 4 A 304 LEU LEU ILE ARG GLN MET ARG THR PHE LYS ASP VAL PHE SEQRES 5 A 304 VAL SER LEU GLY PHE GLU GLU MET ASN THR HIS ASN TYR SEQRES 6 A 304 VAL GLU SER SER PHE TRP CYS PHE ASP ALA LEU TYR ILE SEQRES 7 A 304 PRO GLN GLN HIS PRO SER ARG ASP LEU GLN ASP THR PHE SEQRES 8 A 304 PHE ILE LYS VAL PRO GLU MET CYS GLN GLU GLU PHE THR SEQRES 9 A 304 ASP GLN SER TYR ILE GLU ASN VAL LYS ARG VAL HIS SER SEQRES 10 A 304 VAL GLY ASP TYR GLY SER PHE GLY TRP ASN TYR GLN TRP SEQRES 11 A 304 GLU LEU LYS SER THR LYS LYS ASN VAL LEU ARG THR HIS SEQRES 12 A 304 THR THR ALA ASN SER CYS ARG ALA LEU PHE GLN LEU ALA SEQRES 13 A 304 LYS GLU TYR GLN LYS THR GLY SER ILE ILE PRO LYS LYS SEQRES 14 A 304 PHE PHE SER ILE ASP ARG VAL PHE ARG ASN GLU ASN LEU SEQRES 15 A 304 ASP SER THR HIS LEU ALA GLU PHE HIS GLN VAL GLU GLY SEQRES 16 A 304 LEU ILE ILE ASP ARG ASN LEU GLY LEU SER HIS LEU ILE SEQRES 17 A 304 GLY THR LEU SER ALA PHE TYR LYS TYR ILE GLY ILE SER SEQRES 18 A 304 LYS LEU ARG PHE LYS PRO THR PHE ASN PRO TYR THR GLU SEQRES 19 A 304 PRO SER MET GLU VAL TYR GLY TYR HIS GLU GLU ASN LYS SEQRES 20 A 304 LYS TRP LEU GLU VAL GLY ASN SER GLY ILE PHE ARG PRO SEQRES 21 A 304 GLU MET LEU ARG ALA MET GLY PHE PRO PRO GLU VAL SER SEQRES 22 A 304 VAL ILE ALA TRP GLY LEU SER LEU GLU ARG PRO THR MET SEQRES 23 A 304 ILE LYS TYR SER ILE ARG ASN ILE ARG ASP LEU PHE GLY SEQRES 24 A 304 TYR ARG SER VAL ILE SEQRES 1 B 618 MET GLY PRO THR ILE SER VAL HIS GLU GLU ASP LEU ILE SEQRES 2 B 618 GLU LYS LEU GLY GLU LYS ILE GLU GLU GLU LYS LEU ASN SEQRES 3 B 618 ASP ILE CYS PHE GLU PHE GLY ILE GLU ILE ASP ASP VAL SEQRES 4 B 618 GLU TYR LYS GLY GLU LYS LYS ILE TYR LYS ILE GLU VAL SEQRES 5 B 618 PRO ALA ASN ARG TYR ASP LEU VAL CYS VAL GLU GLY LEU SEQRES 6 B 618 CYS ARG ALA LEU LYS SER PHE ILE GLY LYS TYR GLU ASN SEQRES 7 B 618 VAL SER TYR ALA LEU LEU THR ASN SER GLU GLU ALA CYS SEQRES 8 B 618 VAL LYS GLU LYS HIS PHE MET ARG VAL ASP GLU SER VAL SEQRES 9 B 618 ASP GLU ARG ARG SER TYR VAL VAL SER ALA VAL LEU LYS SEQRES 10 B 618 ASN VAL LYS MET ASN GLU ASN VAL TYR ASN ASN ILE ILE SEQRES 11 B 618 GLU LEU GLN GLU LYS LEU HIS HIS ASN LEU GLY LYS LYS SEQRES 12 B 618 ARG ILE LEU LEU ALA ILE GLY ILE HIS ASP TYR ASP LYS SEQRES 13 B 618 ILE ASN PHE PRO VAL ALA TYR LYS PHE GLU GLU LYS GLU SEQRES 14 B 618 LYS ILE ASN PHE ILE PRO LEU ASN GLU THR GLN ASN VAL SEQRES 15 B 618 ASN GLY ASN ASN PHE ILE ASN PHE TYR GLN ASP ASN ILE SEQRES 16 B 618 ASN LEU LYS SER TYR LEU LYS ILE ILE SER ASP PHE GLU SEQRES 17 B 618 LYS PHE PRO VAL ILE VAL ASP ALA GLY GLY GLN ILE LEU SEQRES 18 B 618 SER LEU PRO PRO ILE ILE ASN CYS ASP TYR THR LYS ILE SEQRES 19 B 618 THR TYR ASP THR ARG ASN LEU PHE ILE GLU CYS THR ALA SEQRES 20 B 618 ILE ASP ARG ASN LYS ALA GLU ILE ALA VAL ASN ILE ILE SEQRES 21 B 618 CYS SER MET LEU SER GLU TYR CYS THR PRO LYS TYR SER SEQRES 22 B 618 ILE HIS SER PHE PHE VAL GLN TYR ASP LYS ASN HIS LYS SEQRES 23 B 618 ALA GLU LYS GLY ASN GLY TYR LEU TYR PRO VAL PHE LYS SEQRES 24 B 618 ASN LYS THR LEU THR CYS HIS MET ASP TYR VAL ARG LYS SEQRES 25 B 618 LEU SER GLY ILE LEU ASN LEU SER VAL LYS ASP VAL GLU SEQRES 26 B 618 PRO LEU LEU LYS LYS MET MET ILE THR SER LYS VAL ILE SEQRES 27 B 618 ASP SER SER THR PHE THR VAL ASP VAL PRO PHE TYR ARG SEQRES 28 B 618 SER ASP ILE MET HIS PHE CYS ASP ILE VAL GLU ASP ILE SEQRES 29 B 618 ALA ILE ALA TYR GLY TYR GLY ASN ILE VAL SER GLU LYS SEQRES 30 B 618 ILE GLU ILE ALA LYS LYS ASN SER LEU SER ALA CYS THR SEQRES 31 B 618 GLU LEU PHE ARG ASN VAL LEU ALA GLU CYS THR TYR THR SEQRES 32 B 618 GLU VAL MET THR ASN ALA LEU LEU SER LYS ARG GLU ASN SEQRES 33 B 618 TYR ASP CME MET LEU ARG LYS HIS ARG SER TYR ASP ASP SEQRES 34 B 618 ARG LYS ILE ASN LEU ASP GLU TYR ASN PRO LEU ALA PRO SEQRES 35 B 618 PRO VAL GLN ILE MET ASN SER LYS THR SER GLU TYR GLU SEQRES 36 B 618 ILE VAL ARG THR SER LEU ILE VAL ASN MET LEU LYS PHE SEQRES 37 B 618 VAL SER ALA ASN LYS HIS ARG GLU LEU PRO LEU ARG PHE SEQRES 38 B 618 PHE GLU ILE GLY ASP VAL SER TYR THR THR TYR ASP ARG SEQRES 39 B 618 THR ASP THR ASN ALA VAL ASN LYS ARG TYR LEU SER VAL SEQRES 40 B 618 ILE PHE ALA ASP LYS PHE THR ALA GLY LEU GLU GLU ALA SEQRES 41 B 618 HIS GLY MET LEU GLU THR VAL LEU LYS GLU PHE GLN LEU SEQRES 42 B 618 PHE SER ASP TYR LYS ILE GLU GLU LYS SER LYS GLU ASN SEQRES 43 B 618 VAL ALA ILE ARG SER ASP VAL PHE TYR LYS LEU VAL PRO SEQRES 44 B 618 LYS GLU ASP PRO SER PHE LEU ASN GLU ARG VAL VAL ASP SEQRES 45 B 618 ILE VAL LEU CME PRO HIS ASN LEU LYS PHE GLY ILE MET SEQRES 46 B 618 GLY ILE ILE HIS PRO LYS VAL LEU GLU ASN PHE SER ILE SEQRES 47 B 618 ASP ILE PRO VAL SER VAL ILE GLU ILE ASN ILE GLU THR SEQRES 48 B 618 ILE MET ASP VAL LEU MET MET MODRES 9UIV CME B 418 CYS MODIFIED RESIDUE MODRES 9UIV CME B 575 CYS MODIFIED RESIDUE HET CME B 418 10 HET CME B 575 10 HET PHE A 601 12 HET CL A 602 1 HET MG B 701 1 HET SO4 B 702 5 HET GOL B 703 6 HET CL B 704 1 HET GOL B 705 6 HETNAM CME S,S-(2-HYDROXYETHYL)THIOCYSTEINE HETNAM PHE PHENYLALANINE HETNAM CL CHLORIDE ION HETNAM MG MAGNESIUM ION HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 CME 2(C5 H11 N O3 S2) FORMUL 3 PHE C9 H11 N O2 FORMUL 4 CL 2(CL 1-) FORMUL 5 MG MG 2+ FORMUL 6 SO4 O4 S 2- FORMUL 7 GOL 2(C3 H8 O3) FORMUL 10 HOH *142(H2 O) HELIX 1 AA1 THR A 272 ASN A 278 1 7 HELIX 2 AA2 HIS A 304 LEU A 320 1 17 HELIX 3 AA3 SER A 334 PHE A 338 1 5 HELIX 4 AA4 ASP A 339 TYR A 342 5 4 HELIX 5 AA5 HIS A 347 GLN A 353 5 7 HELIX 6 AA6 ASP A 370 VAL A 383 1 14 HELIX 7 AA7 GLU A 396 LYS A 401 1 6 HELIX 8 AA8 THR A 409 GLY A 428 1 20 HELIX 9 AA9 GLY A 468 ILE A 483 1 16 HELIX 10 AB1 ARG A 524 MET A 531 1 8 HELIX 11 AB2 LEU A 546 TYR A 554 1 9 HELIX 12 AB3 ASN A 558 PHE A 563 1 6 HELIX 13 AB4 GLU B 8 GLY B 16 1 9 HELIX 14 AB5 GLU B 20 GLY B 32 1 13 HELIX 15 AB6 ARG B 55 VAL B 59 5 5 HELIX 16 AB7 CYS B 60 ILE B 72 1 13 HELIX 17 AB8 SER B 86 LYS B 94 1 9 HELIX 18 AB9 ASN B 121 ASN B 138 1 18 HELIX 19 AC1 ASP B 154 ILE B 156 5 3 HELIX 20 AC2 GLY B 183 GLN B 191 1 9 HELIX 21 AC3 LEU B 196 LYS B 201 1 6 HELIX 22 AC4 ASP B 248 SER B 264 1 17 HELIX 23 AC5 GLU B 265 CYS B 267 5 3 HELIX 24 AC6 HIS B 305 GLY B 314 1 10 HELIX 25 AC7 SER B 319 MET B 330 1 12 HELIX 26 AC8 HIS B 355 GLY B 368 1 14 HELIX 27 AC9 TYR B 369 ILE B 372 5 4 HELIX 28 AD1 ASN B 383 CYS B 399 1 17 HELIX 29 AD2 SER B 411 TYR B 416 1 6 HELIX 30 AD3 LEU B 460 ASN B 471 1 12 HELIX 31 AD4 GLY B 515 GLU B 529 1 15 HELIX 32 AD5 SER B 534 GLU B 544 1 11 HELIX 33 AD6 HIS B 588 PHE B 595 1 8 HELIX 34 AD7 ILE B 608 MET B 612 1 5 HELIX 35 AD8 ASP B 613 LEU B 615 5 3 SHEET 1 AA1 2 GLN A 267 ILE A 268 0 SHEET 2 AA1 2 GLN A 285 VAL A 286 1 O GLN A 285 N ILE A 268 SHEET 1 AA2 7 GLU A 323 GLU A 324 0 SHEET 2 AA2 7 LYS A 433 PHE A 442 1 O LYS A 434 N GLU A 323 SHEET 3 AA2 7 GLU A 454 ARG A 465 -1 O PHE A 455 N VAL A 441 SHEET 4 AA2 7 VAL A 537 SER A 545 -1 O LEU A 544 N VAL A 458 SHEET 5 AA2 7 TRP A 514 PHE A 523 -1 N ASN A 519 O GLY A 543 SHEET 6 AA2 7 THR A 498 TYR A 507 -1 N MET A 502 O SER A 520 SHEET 7 AA2 7 LEU A 488 PRO A 492 -1 N ARG A 489 O TYR A 505 SHEET 1 AA3 2 VAL A 331 SER A 333 0 SHEET 2 AA3 2 ASN A 403 LEU A 405 -1 O VAL A 404 N GLU A 332 SHEET 1 AA4 3 THR B 3 HIS B 7 0 SHEET 2 AA4 3 LYS B 44 GLU B 50 -1 O TYR B 47 N VAL B 6 SHEET 3 AA4 3 GLU B 34 LYS B 41 -1 N ASP B 37 O LYS B 48 SHEET 1 AA5 2 ALA B 81 LEU B 83 0 SHEET 2 AA5 2 SER B 272 HIS B 274 1 O ILE B 273 N ALA B 81 SHEET 1 AA6 7 ILE B 226 ASN B 227 0 SHEET 2 AA6 7 ILE B 219 LEU B 222 -1 N LEU B 222 O ILE B 226 SHEET 3 AA6 7 PHE B 209 ASP B 214 -1 N ILE B 212 O LEU B 220 SHEET 4 AA6 7 VAL B 160 GLU B 165 -1 N GLU B 165 O PHE B 209 SHEET 5 AA6 7 PHE B 96 VAL B 99 1 N PHE B 96 O VAL B 160 SHEET 6 AA6 7 PHE B 276 TYR B 280 1 O GLN B 279 N MET B 97 SHEET 7 AA6 7 GLY B 291 TYR B 294 -1 O TYR B 292 N VAL B 278 SHEET 1 AA7 3 TYR B 109 LEU B 115 0 SHEET 2 AA7 3 LEU B 240 ALA B 246 -1 O ILE B 242 N ALA B 113 SHEET 3 AA7 3 LEU B 146 ASP B 152 -1 N GLY B 149 O GLU B 243 SHEET 1 AA8 2 ASN B 171 PHE B 172 0 SHEET 2 AA8 2 VAL B 181 ASN B 182 -1 O VAL B 181 N PHE B 172 SHEET 1 AA9 3 THR B 301 CYS B 304 0 SHEET 2 AA9 3 THR B 341 ASP B 345 -1 O PHE B 342 N CYS B 304 SHEET 3 AA9 3 THR B 333 ASP B 338 -1 N LYS B 335 O THR B 343 SHEET 1 AB1 7 THR B 402 GLU B 403 0 SHEET 2 AB1 7 LEU B 478 THR B 489 1 O ARG B 479 N THR B 402 SHEET 3 AB1 7 ALA B 498 ALA B 509 -1 O ILE B 507 N PHE B 480 SHEET 4 AB1 7 VAL B 601 ASN B 607 -1 O SER B 602 N PHE B 508 SHEET 5 AB1 7 LEU B 579 ILE B 587 -1 N PHE B 581 O ASN B 607 SHEET 6 AB1 7 PHE B 564 CME B 575 -1 N LEU B 574 O LEU B 579 SHEET 7 AB1 7 PHE B 553 PRO B 558 -1 N PHE B 553 O CME B 575 SHEET 1 AB2 2 LEU B 409 LEU B 410 0 SHEET 2 AB2 2 ILE B 455 VAL B 456 -1 O ILE B 455 N LEU B 410 LINK C ASP B 417 N CME B 418 1555 1555 1.33 LINK C CME B 418 N MET B 419 1555 1555 1.33 LINK C LEU B 574 N CME B 575 1555 1555 1.34 LINK C CME B 575 N PRO B 576 1555 1555 1.34 LINK OE2 GLU A 499 MG MG B 701 1555 1555 2.86 LINK OE1 GLU B 361 MG MG B 701 1555 1555 2.42 CISPEP 1 VAL A 360 PRO A 361 0 -2.10 CISPEP 2 GLU A 499 PRO A 500 0 1.20 CISPEP 3 PHE B 158 PRO B 159 0 2.76 CISPEP 4 PRO B 223 PRO B 224 0 -0.29 CISPEP 5 TYR B 294 PRO B 295 0 -3.67 CISPEP 6 LEU B 476 PRO B 477 0 -0.02 CISPEP 7 CME B 575 PRO B 576 0 4.84 CRYST1 136.241 73.987 120.934 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007340 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013516 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008269 0.00000 CONECT 1944 7378 CONECT 5285 7378 CONECT 5717 5723 CONECT 5723 5717 5724 CONECT 5724 5723 5725 5731 CONECT 5725 5724 5726 CONECT 5726 5725 5727 CONECT 5727 5726 5728 CONECT 5728 5727 5729 CONECT 5729 5728 5730 CONECT 5730 5729 CONECT 5731 5724 5732 5733 CONECT 5732 5731 CONECT 5733 5731 CONECT 7016 7022 CONECT 7022 7016 7023 CONECT 7023 7022 7024 7030 CONECT 7024 7023 7025 CONECT 7025 7024 7026 CONECT 7026 7025 7027 CONECT 7027 7026 7028 CONECT 7028 7027 7029 CONECT 7029 7028 CONECT 7030 7023 7031 7032 CONECT 7031 7030 CONECT 7032 7030 CONECT 7378 1944 5285 CONECT 7379 7380 7381 7382 7383 CONECT 7380 7379 CONECT 7381 7379 CONECT 7382 7379 CONECT 7383 7379 CONECT 7384 7385 7386 CONECT 7385 7384 CONECT 7386 7384 7387 7388 CONECT 7387 7386 CONECT 7388 7386 7389 CONECT 7389 7388 CONECT 7391 7392 7393 CONECT 7392 7391 CONECT 7393 7391 7394 7395 CONECT 7394 7393 CONECT 7395 7393 7396 CONECT 7396 7395 MASTER 346 0 9 35 40 0 0 6 7526 2 44 72 END