data_9UMF # _entry.id 9UMF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.413 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9UMF pdb_00009umf 10.2210/pdb9umf/pdb WWPDB D_1300058728 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2026-04-29 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9UMF _pdbx_database_status.recvd_initial_deposition_date 2025-04-21 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBC _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 2 _pdbx_contact_author.email 948805786@qq.com _pdbx_contact_author.name_first Ming _pdbx_contact_author.name_last Yan _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-6340-6759 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Yan, M.' 1 ? 'Zhang, H.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Human poly ADP-ribose polymerase(PARP-1 )zinc finger 1 bound to 17bp DNA of promoter of DR5' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yan, M.' 1 ? primary 'Zhang, H.' 2 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Poly [ADP-ribose] polymerase 1, processed N-terminus' 10140.599 2 ? ? 'zinc finger 1' ? 2 polymer man ;DNA (5'-D(*GP*AP*GP*AP*AP*CP*CP*CP*CP*GP*CP*AP*AP*TP*CP*TP*C)-3') ; 5141.352 1 ? ? ? ? 3 polymer man ;DNA (5'-D(*GP*AP*GP*AP*TP*TP*GP*CP*GP*GP*GP*GP*TP*TP*CP*TP*C)-3') ; 5274.405 1 ? ? ? ? 4 non-polymer syn 'ZINC ION' 65.409 2 ? ? ? ? 5 water nat water 18.015 8 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'NT-PARP-1,Poly [ADP-ribose] polymerase 1,24-kDa form,28-kDa form' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;SDKLYRVEYAKSGRASCKKCSESIPKDSLRMAIMVQSPMFDGKVPHWYHFSCFWKVGHSIRHPDVEVDGFSELRWDDQQK VKKTAEA ; ;SDKLYRVEYAKSGRASCKKCSESIPKDSLRMAIMVQSPMFDGKVPHWYHFSCFWKVGHSIRHPDVEVDGFSELRWDDQQK VKKTAEA ; A,B ? 2 polydeoxyribonucleotide no no '(DG)(DA)(DG)(DA)(DA)(DC)(DC)(DC)(DC)(DG)(DC)(DA)(DA)(DT)(DC)(DT)(DC)' GAGAACCCCGCAATCTC C ? 3 polydeoxyribonucleotide no no '(DG)(DA)(DG)(DA)(DT)(DT)(DG)(DC)(DG)(DG)(DG)(DG)(DT)(DT)(DC)(DT)(DC)' GAGATTGCGGGGTTCTC D ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'ZINC ION' ZN 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASP n 1 3 LYS n 1 4 LEU n 1 5 TYR n 1 6 ARG n 1 7 VAL n 1 8 GLU n 1 9 TYR n 1 10 ALA n 1 11 LYS n 1 12 SER n 1 13 GLY n 1 14 ARG n 1 15 ALA n 1 16 SER n 1 17 CYS n 1 18 LYS n 1 19 LYS n 1 20 CYS n 1 21 SER n 1 22 GLU n 1 23 SER n 1 24 ILE n 1 25 PRO n 1 26 LYS n 1 27 ASP n 1 28 SER n 1 29 LEU n 1 30 ARG n 1 31 MET n 1 32 ALA n 1 33 ILE n 1 34 MET n 1 35 VAL n 1 36 GLN n 1 37 SER n 1 38 PRO n 1 39 MET n 1 40 PHE n 1 41 ASP n 1 42 GLY n 1 43 LYS n 1 44 VAL n 1 45 PRO n 1 46 HIS n 1 47 TRP n 1 48 TYR n 1 49 HIS n 1 50 PHE n 1 51 SER n 1 52 CYS n 1 53 PHE n 1 54 TRP n 1 55 LYS n 1 56 VAL n 1 57 GLY n 1 58 HIS n 1 59 SER n 1 60 ILE n 1 61 ARG n 1 62 HIS n 1 63 PRO n 1 64 ASP n 1 65 VAL n 1 66 GLU n 1 67 VAL n 1 68 ASP n 1 69 GLY n 1 70 PHE n 1 71 SER n 1 72 GLU n 1 73 LEU n 1 74 ARG n 1 75 TRP n 1 76 ASP n 1 77 ASP n 1 78 GLN n 1 79 GLN n 1 80 LYS n 1 81 VAL n 1 82 LYS n 1 83 LYS n 1 84 THR n 1 85 ALA n 1 86 GLU n 1 87 ALA n 2 1 DG n 2 2 DA n 2 3 DG n 2 4 DA n 2 5 DA n 2 6 DC n 2 7 DC n 2 8 DC n 2 9 DC n 2 10 DG n 2 11 DC n 2 12 DA n 2 13 DA n 2 14 DT n 2 15 DC n 2 16 DT n 2 17 DC n 3 1 DG n 3 2 DA n 3 3 DG n 3 4 DA n 3 5 DT n 3 6 DT n 3 7 DG n 3 8 DC n 3 9 DG n 3 10 DG n 3 11 DG n 3 12 DG n 3 13 DT n 3 14 DT n 3 15 DC n 3 16 DT n 3 17 DC n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 87 human ? 'PARP1, ADPRT, PPOL' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli BL21(DE3)' 469008 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 17 ? ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli BL21(DE3)' 469008 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample 'Biological sequence' 1 17 ? ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli BL21(DE3)' 469008 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 5 ? ? ? A . n A 1 2 ASP 2 6 6 ASP ASP A . n A 1 3 LYS 3 7 7 LYS LYS A . n A 1 4 LEU 4 8 8 LEU LEU A . n A 1 5 TYR 5 9 9 TYR TYR A . n A 1 6 ARG 6 10 10 ARG ARG A . n A 1 7 VAL 7 11 11 VAL VAL A . n A 1 8 GLU 8 12 12 GLU GLU A . n A 1 9 TYR 9 13 13 TYR TYR A . n A 1 10 ALA 10 14 14 ALA ALA A . n A 1 11 LYS 11 15 15 LYS LYS A . n A 1 12 SER 12 16 16 SER SER A . n A 1 13 GLY 13 17 17 GLY GLY A . n A 1 14 ARG 14 18 18 ARG ARG A . n A 1 15 ALA 15 19 19 ALA ALA A . n A 1 16 SER 16 20 20 SER SER A . n A 1 17 CYS 17 21 21 CYS CYS A . n A 1 18 LYS 18 22 22 LYS LYS A . n A 1 19 LYS 19 23 23 LYS LYS A . n A 1 20 CYS 20 24 24 CYS CYS A . n A 1 21 SER 21 25 25 SER SER A . n A 1 22 GLU 22 26 26 GLU GLU A . n A 1 23 SER 23 27 27 SER SER A . n A 1 24 ILE 24 28 28 ILE ILE A . n A 1 25 PRO 25 29 29 PRO PRO A . n A 1 26 LYS 26 30 30 LYS LYS A . n A 1 27 ASP 27 31 31 ASP ASP A . n A 1 28 SER 28 32 32 SER SER A . n A 1 29 LEU 29 33 33 LEU LEU A . n A 1 30 ARG 30 34 34 ARG ARG A . n A 1 31 MET 31 35 35 MET MET A . n A 1 32 ALA 32 36 36 ALA ALA A . n A 1 33 ILE 33 37 37 ILE ILE A . n A 1 34 MET 34 38 38 MET MET A . n A 1 35 VAL 35 39 39 VAL VAL A . n A 1 36 GLN 36 40 40 GLN GLN A . n A 1 37 SER 37 41 41 SER SER A . n A 1 38 PRO 38 42 42 PRO PRO A . n A 1 39 MET 39 43 43 MET MET A . n A 1 40 PHE 40 44 44 PHE PHE A . n A 1 41 ASP 41 45 45 ASP ASP A . n A 1 42 GLY 42 46 46 GLY GLY A . n A 1 43 LYS 43 47 47 LYS LYS A . n A 1 44 VAL 44 48 48 VAL VAL A . n A 1 45 PRO 45 49 49 PRO PRO A . n A 1 46 HIS 46 50 50 HIS HIS A . n A 1 47 TRP 47 51 51 TRP TRP A . n A 1 48 TYR 48 52 52 TYR TYR A . n A 1 49 HIS 49 53 53 HIS HIS A . n A 1 50 PHE 50 54 54 PHE PHE A . n A 1 51 SER 51 55 55 SER SER A . n A 1 52 CYS 52 56 56 CYS CYS A . n A 1 53 PHE 53 57 57 PHE PHE A . n A 1 54 TRP 54 58 58 TRP TRP A . n A 1 55 LYS 55 59 59 LYS LYS A . n A 1 56 VAL 56 60 60 VAL VAL A . n A 1 57 GLY 57 61 61 GLY GLY A . n A 1 58 HIS 58 62 62 HIS HIS A . n A 1 59 SER 59 63 63 SER SER A . n A 1 60 ILE 60 64 64 ILE ILE A . n A 1 61 ARG 61 65 65 ARG ARG A . n A 1 62 HIS 62 66 66 HIS HIS A . n A 1 63 PRO 63 67 67 PRO PRO A . n A 1 64 ASP 64 68 68 ASP ASP A . n A 1 65 VAL 65 69 69 VAL VAL A . n A 1 66 GLU 66 70 70 GLU GLU A . n A 1 67 VAL 67 71 71 VAL VAL A . n A 1 68 ASP 68 72 72 ASP ASP A . n A 1 69 GLY 69 73 73 GLY GLY A . n A 1 70 PHE 70 74 74 PHE PHE A . n A 1 71 SER 71 75 75 SER SER A . n A 1 72 GLU 72 76 76 GLU GLU A . n A 1 73 LEU 73 77 77 LEU LEU A . n A 1 74 ARG 74 78 78 ARG ARG A . n A 1 75 TRP 75 79 79 TRP TRP A . n A 1 76 ASP 76 80 80 ASP ASP A . n A 1 77 ASP 77 81 81 ASP ASP A . n A 1 78 GLN 78 82 82 GLN GLN A . n A 1 79 GLN 79 83 83 GLN GLN A . n A 1 80 LYS 80 84 84 LYS LYS A . n A 1 81 VAL 81 85 85 VAL VAL A . n A 1 82 LYS 82 86 86 LYS LYS A . n A 1 83 LYS 83 87 87 LYS LYS A . n A 1 84 THR 84 88 88 THR THR A . n A 1 85 ALA 85 89 89 ALA ALA A . n A 1 86 GLU 86 90 90 GLU GLU A . n A 1 87 ALA 87 91 91 ALA ALA A . n B 1 1 SER 1 5 5 SER SER B . n B 1 2 ASP 2 6 6 ASP ASP B . n B 1 3 LYS 3 7 7 LYS LYS B . n B 1 4 LEU 4 8 8 LEU LEU B . n B 1 5 TYR 5 9 9 TYR TYR B . n B 1 6 ARG 6 10 10 ARG ARG B . n B 1 7 VAL 7 11 11 VAL VAL B . n B 1 8 GLU 8 12 12 GLU GLU B . n B 1 9 TYR 9 13 13 TYR TYR B . n B 1 10 ALA 10 14 14 ALA ALA B . n B 1 11 LYS 11 15 15 LYS LYS B . n B 1 12 SER 12 16 16 SER SER B . n B 1 13 GLY 13 17 17 GLY GLY B . n B 1 14 ARG 14 18 18 ARG ARG B . n B 1 15 ALA 15 19 19 ALA ALA B . n B 1 16 SER 16 20 20 SER SER B . n B 1 17 CYS 17 21 21 CYS CYS B . n B 1 18 LYS 18 22 22 LYS LYS B . n B 1 19 LYS 19 23 23 LYS LYS B . n B 1 20 CYS 20 24 24 CYS CYS B . n B 1 21 SER 21 25 25 SER SER B . n B 1 22 GLU 22 26 26 GLU GLU B . n B 1 23 SER 23 27 27 SER SER B . n B 1 24 ILE 24 28 28 ILE ILE B . n B 1 25 PRO 25 29 29 PRO PRO B . n B 1 26 LYS 26 30 30 LYS LYS B . n B 1 27 ASP 27 31 31 ASP ASP B . n B 1 28 SER 28 32 32 SER SER B . n B 1 29 LEU 29 33 33 LEU LEU B . n B 1 30 ARG 30 34 34 ARG ARG B . n B 1 31 MET 31 35 35 MET MET B . n B 1 32 ALA 32 36 36 ALA ALA B . n B 1 33 ILE 33 37 37 ILE ILE B . n B 1 34 MET 34 38 38 MET MET B . n B 1 35 VAL 35 39 39 VAL VAL B . n B 1 36 GLN 36 40 40 GLN GLN B . n B 1 37 SER 37 41 41 SER SER B . n B 1 38 PRO 38 42 42 PRO PRO B . n B 1 39 MET 39 43 43 MET MET B . n B 1 40 PHE 40 44 44 PHE PHE B . n B 1 41 ASP 41 45 45 ASP ASP B . n B 1 42 GLY 42 46 46 GLY GLY B . n B 1 43 LYS 43 47 47 LYS LYS B . n B 1 44 VAL 44 48 48 VAL VAL B . n B 1 45 PRO 45 49 49 PRO PRO B . n B 1 46 HIS 46 50 50 HIS HIS B . n B 1 47 TRP 47 51 51 TRP TRP B . n B 1 48 TYR 48 52 52 TYR TYR B . n B 1 49 HIS 49 53 53 HIS HIS B . n B 1 50 PHE 50 54 54 PHE PHE B . n B 1 51 SER 51 55 55 SER SER B . n B 1 52 CYS 52 56 56 CYS CYS B . n B 1 53 PHE 53 57 57 PHE PHE B . n B 1 54 TRP 54 58 58 TRP TRP B . n B 1 55 LYS 55 59 59 LYS LYS B . n B 1 56 VAL 56 60 60 VAL VAL B . n B 1 57 GLY 57 61 61 GLY GLY B . n B 1 58 HIS 58 62 62 HIS HIS B . n B 1 59 SER 59 63 63 SER SER B . n B 1 60 ILE 60 64 64 ILE ILE B . n B 1 61 ARG 61 65 65 ARG ARG B . n B 1 62 HIS 62 66 66 HIS HIS B . n B 1 63 PRO 63 67 67 PRO PRO B . n B 1 64 ASP 64 68 68 ASP ASP B . n B 1 65 VAL 65 69 69 VAL VAL B . n B 1 66 GLU 66 70 70 GLU GLU B . n B 1 67 VAL 67 71 71 VAL VAL B . n B 1 68 ASP 68 72 72 ASP ASP B . n B 1 69 GLY 69 73 73 GLY GLY B . n B 1 70 PHE 70 74 74 PHE PHE B . n B 1 71 SER 71 75 75 SER SER B . n B 1 72 GLU 72 76 76 GLU GLU B . n B 1 73 LEU 73 77 77 LEU LEU B . n B 1 74 ARG 74 78 78 ARG ARG B . n B 1 75 TRP 75 79 79 TRP TRP B . n B 1 76 ASP 76 80 80 ASP ASP B . n B 1 77 ASP 77 81 81 ASP ASP B . n B 1 78 GLN 78 82 82 GLN GLN B . n B 1 79 GLN 79 83 83 GLN GLN B . n B 1 80 LYS 80 84 84 LYS LYS B . n B 1 81 VAL 81 85 85 VAL VAL B . n B 1 82 LYS 82 86 86 LYS LYS B . n B 1 83 LYS 83 87 87 LYS LYS B . n B 1 84 THR 84 88 88 THR THR B . n B 1 85 ALA 85 89 89 ALA ALA B . n B 1 86 GLU 86 90 90 GLU GLU B . n B 1 87 ALA 87 91 91 ALA ALA B . n C 2 1 DG 1 1 1 DG DG C . n C 2 2 DA 2 2 2 DA DA C . n C 2 3 DG 3 3 3 DG DG C . n C 2 4 DA 4 4 4 DA DA C . n C 2 5 DA 5 5 5 DA DA C . n C 2 6 DC 6 6 6 DC DC C . n C 2 7 DC 7 7 7 DC DC C . n C 2 8 DC 8 8 8 DC DC C . n C 2 9 DC 9 9 9 DC DC C . n C 2 10 DG 10 10 10 DG DG C . n C 2 11 DC 11 11 11 DC DC C . n C 2 12 DA 12 12 12 DA DA C . n C 2 13 DA 13 13 13 DA DA C . n C 2 14 DT 14 14 14 DT DT C . n C 2 15 DC 15 15 15 DC DC C . n C 2 16 DT 16 16 16 DT DT C . n C 2 17 DC 17 17 17 DC DC C . n D 3 1 DG 1 18 18 DG DG D . n D 3 2 DA 2 19 19 DA DA D . n D 3 3 DG 3 20 20 DG DG D . n D 3 4 DA 4 21 21 DA DA D . n D 3 5 DT 5 22 22 DT DT D . n D 3 6 DT 6 23 23 DT DT D . n D 3 7 DG 7 24 24 DG DG D . n D 3 8 DC 8 25 25 DC DC D . n D 3 9 DG 9 26 26 DG DG D . n D 3 10 DG 10 27 27 DG DG D . n D 3 11 DG 11 28 28 DG DG D . n D 3 12 DG 12 29 29 DG DG D . n D 3 13 DT 13 30 30 DT DT D . n D 3 14 DT 14 31 31 DT DT D . n D 3 15 DC 15 32 32 DC DC D . n D 3 16 DT 16 33 33 DT DT D . n D 3 17 DC 17 34 34 DC DC D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 ZN 1 101 1 ZN ZN A . F 4 ZN 1 101 2 ZN ZN B . G 5 HOH 1 201 11 HOH HOH A . G 5 HOH 2 202 8 HOH HOH A . G 5 HOH 3 203 10 HOH HOH A . H 5 HOH 1 201 4 HOH HOH B . H 5 HOH 2 202 7 HOH HOH B . H 5 HOH 3 203 9 HOH HOH B . H 5 HOH 4 204 1 HOH HOH B . I 5 HOH 1 101 6 HOH HOH C . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_reference_DOI _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0425 ? 1 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? . ? 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? autoPROC ? ? ? . ? 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . ? 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . ? 5 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9UMF _cell.details ? _cell.formula_units_Z ? _cell.length_a 30.393 _cell.length_a_esd ? _cell.length_b 36.392 _cell.length_b_esd ? _cell.length_c 307.334 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9UMF _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9UMF _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.77 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 55.63 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '100mM Tris-HCl pH 8.5, 200mM NaCl, 25% PEG3350' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 289 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2024-10-22 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97861 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL19U1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97861 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL19U1 _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 9UMF _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 3.5 _reflns.d_resolution_low 76.95 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 4688 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 96.8 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 1.7 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 5.7 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.975 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 3.5 _reflns_shell.d_res_low 3.83 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1059 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.955 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] -0.25 _refine.aniso_B[1][2] -0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][2] -3.63 _refine.aniso_B[2][3] -0.00 _refine.aniso_B[3][3] 3.89 _refine.B_iso_max ? _refine.B_iso_mean 72.952 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.953 _refine.correlation_coeff_Fo_to_Fc_free 0.915 _refine.details 'HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9UMF _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 3.50 _refine.ls_d_res_low 76.95 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 4490 _refine.ls_number_reflns_R_free 197 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 96.88 _refine.ls_percent_reflns_R_free 4.2 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.18294 _refine.ls_R_factor_R_free 0.23962 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.18015 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details MASK _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.590 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 89.097 _refine.overall_SU_ML 0.579 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.details ? _refine_hist.d_res_high 3.50 _refine_hist.d_res_low 76.95 _refine_hist.number_atoms_solvent 8 _refine_hist.number_atoms_total 2117 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 1416 _refine_hist.pdbx_number_atoms_nucleic_acid 691 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_Zscore _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.004 0.012 2230 ? r_bond_refined_d ? ? ? 'X-RAY DIFFRACTION' ? 0.001 0.016 1700 ? r_bond_other_d ? ? ? 'X-RAY DIFFRACTION' ? 1.100 1.822 3147 ? r_angle_refined_deg ? ? ? 'X-RAY DIFFRACTION' ? 0.346 1.760 3975 ? r_angle_other_deg ? ? ? 'X-RAY DIFFRACTION' ? 6.770 5.000 171 ? r_dihedral_angle_1_deg ? ? ? 'X-RAY DIFFRACTION' ? 4.260 5.000 10 ? r_dihedral_angle_2_deg ? ? ? 'X-RAY DIFFRACTION' ? 14.258 10.000 267 ? r_dihedral_angle_3_deg ? ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_dihedral_angle_4_deg ? ? ? 'X-RAY DIFFRACTION' ? 0.045 0.200 327 ? r_chiral_restr ? ? ? 'X-RAY DIFFRACTION' ? 0.004 0.020 2114 ? r_gen_planes_refined ? ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 463 ? r_gen_planes_other ? ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? ? 'X-RAY DIFFRACTION' ? 11.226 6.609 690 ? r_mcbond_it ? ? ? 'X-RAY DIFFRACTION' ? 11.248 ? 690 ? r_mcbond_other ? ? ? 'X-RAY DIFFRACTION' ? 18.758 11.862 859 ? r_mcangle_it ? ? ? 'X-RAY DIFFRACTION' ? 18.752 12.515 860 ? r_mcangle_other ? ? ? 'X-RAY DIFFRACTION' ? 11.174 7.401 1540 ? r_scbond_it ? ? ? 'X-RAY DIFFRACTION' ? 11.171 ? 1541 ? r_scbond_other ? ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? ? 'X-RAY DIFFRACTION' ? 18.128 13.422 2289 ? r_scangle_other ? ? ? 'X-RAY DIFFRACTION' ? 29.085 77.42 2877 ? r_long_range_B_refined ? ? ? 'X-RAY DIFFRACTION' ? 29.080 77.41 2878 ? r_long_range_B_other ? ? ? 'X-RAY DIFFRACTION' ? 2.989 3.000 2230 ? r_rigid_bond_restr ? ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 3.500 _refine_ls_shell.d_res_low 3.591 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 15 _refine_ls_shell.number_reflns_R_work 338 _refine_ls_shell.percent_reflns_obs 99.16 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.288 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.correlation_coeff_Fo_to_Fc ? _refine_ls_shell.correlation_coeff_Fo_to_Fc_free ? _refine_ls_shell.correlation_coeff_I_to_Fcsqd_work ? _refine_ls_shell.correlation_coeff_I_to_Fcsqd_free ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? _refine_ls_shell.R_factor_R_free 0.357 # _struct.entry_id 9UMF _struct.title 'Human poly ADP-ribose polymerase(PARP-1 )zinc finger 1 bound to 17bp DNA' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9UMF _struct_keywords.text 'DNA, complex, DNA BINDING PROTEIN/DNA, DNA BINDING PROTEIN-DNA complex' _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN/DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 5 ? H N N 5 ? I N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP PARP1_HUMAN P09874 ? 1 ;SDKLYRVEYAKSGRASCKKCSESIPKDSLRMAIMVQSPMFDGKVPHWYHFSCFWKVGHSIRHPDVEVDGFSELRWDDQQK VKKTAEA ; 5 2 PDB 9UMF 9UMF ? 2 ? 1 3 PDB 9UMF 9UMF ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9UMF A 1 ? 87 ? P09874 5 ? 91 ? 5 91 2 1 9UMF B 1 ? 87 ? P09874 5 ? 91 ? 5 91 3 2 9UMF C 1 ? 17 ? 9UMF 1 ? 17 ? 1 17 4 3 9UMF D 1 ? 17 ? 9UMF 18 ? 34 ? 18 34 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'light scattering' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PHE A 50 ? VAL A 56 ? PHE A 54 VAL A 60 1 ? 7 HELX_P HELX_P2 AA2 HIS A 62 ? GLU A 66 ? HIS A 66 GLU A 70 1 ? 5 HELX_P HELX_P3 AA3 ARG A 74 ? ALA A 87 ? ARG A 78 ALA A 91 1 ? 14 HELX_P HELX_P4 AA4 PHE B 50 ? VAL B 56 ? PHE B 54 VAL B 60 1 ? 7 HELX_P HELX_P5 AA5 HIS B 62 ? GLU B 66 ? HIS B 66 GLU B 70 1 ? 5 HELX_P HELX_P6 AA6 ARG B 74 ? ALA B 87 ? ARG B 78 ALA B 91 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A CYS 17 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 21 A ZN 101 1_555 ? ? ? ? ? ? ? 2.371 ? ? metalc2 metalc ? ? A CYS 20 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 24 A ZN 101 1_555 ? ? ? ? ? ? ? 2.283 ? ? metalc3 metalc ? ? A HIS 49 ND1 ? ? ? 1_555 E ZN . ZN ? ? A HIS 53 A ZN 101 1_555 ? ? ? ? ? ? ? 1.821 ? ? metalc4 metalc ? ? A CYS 52 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 56 A ZN 101 1_555 ? ? ? ? ? ? ? 2.294 ? ? metalc5 metalc ? ? B CYS 17 SG ? ? ? 1_555 F ZN . ZN ? ? B CYS 21 B ZN 101 1_555 ? ? ? ? ? ? ? 2.330 ? ? metalc6 metalc ? ? B CYS 20 SG ? ? ? 1_555 F ZN . ZN ? ? B CYS 24 B ZN 101 1_555 ? ? ? ? ? ? ? 2.368 ? ? metalc7 metalc ? ? B HIS 49 ND1 ? ? ? 1_555 F ZN . ZN ? ? B HIS 53 B ZN 101 1_555 ? ? ? ? ? ? ? 1.919 ? ? metalc8 metalc ? ? B CYS 52 SG ? ? ? 1_555 F ZN . ZN ? ? B CYS 56 B ZN 101 1_555 ? ? ? ? ? ? ? 2.309 ? ? hydrog1 hydrog ? ? C DG 1 N1 ? ? ? 1_555 D DC 17 N3 ? ? C DG 1 D DC 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C DG 1 N2 ? ? ? 1_555 D DC 17 O2 ? ? C DG 1 D DC 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C DG 1 O6 ? ? ? 1_555 D DC 17 N4 ? ? C DG 1 D DC 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C DA 2 N1 ? ? ? 1_555 D DT 16 N3 ? ? C DA 2 D DT 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C DA 2 N6 ? ? ? 1_555 D DT 16 O4 ? ? C DA 2 D DT 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C DG 3 N1 ? ? ? 1_555 D DC 15 N3 ? ? C DG 3 D DC 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C DG 3 N2 ? ? ? 1_555 D DC 15 O2 ? ? C DG 3 D DC 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C DG 3 O6 ? ? ? 1_555 D DC 15 N4 ? ? C DG 3 D DC 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C DA 4 N1 ? ? ? 1_555 D DT 14 N3 ? ? C DA 4 D DT 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C DA 4 N6 ? ? ? 1_555 D DT 14 O4 ? ? C DA 4 D DT 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C DA 5 N1 ? ? ? 1_555 D DT 13 N3 ? ? C DA 5 D DT 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C DA 5 N6 ? ? ? 1_555 D DT 13 O4 ? ? C DA 5 D DT 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C DC 6 N3 ? ? ? 1_555 D DG 12 N1 ? ? C DC 6 D DG 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C DC 6 N4 ? ? ? 1_555 D DG 12 O6 ? ? C DC 6 D DG 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C DC 6 O2 ? ? ? 1_555 D DG 12 N2 ? ? C DC 6 D DG 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DC 7 N3 ? ? ? 1_555 D DG 11 N1 ? ? C DC 7 D DG 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DC 7 N4 ? ? ? 1_555 D DG 11 O6 ? ? C DC 7 D DG 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DC 7 O2 ? ? ? 1_555 D DG 11 N2 ? ? C DC 7 D DG 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DC 8 N3 ? ? ? 1_555 D DG 10 N1 ? ? C DC 8 D DG 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DC 8 N4 ? ? ? 1_555 D DG 10 O6 ? ? C DC 8 D DG 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DC 8 O2 ? ? ? 1_555 D DG 10 N2 ? ? C DC 8 D DG 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DC 9 N3 ? ? ? 1_555 D DG 9 N1 ? ? C DC 9 D DG 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DC 9 N4 ? ? ? 1_555 D DG 9 O6 ? ? C DC 9 D DG 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DC 9 O2 ? ? ? 1_555 D DG 9 N2 ? ? C DC 9 D DG 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DG 10 N1 ? ? ? 1_555 D DC 8 N3 ? ? C DG 10 D DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DG 10 N2 ? ? ? 1_555 D DC 8 O2 ? ? C DG 10 D DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DG 10 O6 ? ? ? 1_555 D DC 8 N4 ? ? C DG 10 D DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DC 11 N3 ? ? ? 1_555 D DG 7 N1 ? ? C DC 11 D DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C DC 11 N4 ? ? ? 1_555 D DG 7 O6 ? ? C DC 11 D DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DC 11 O2 ? ? ? 1_555 D DG 7 N2 ? ? C DC 11 D DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DA 12 N1 ? ? ? 1_555 D DT 6 N3 ? ? C DA 12 D DT 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DA 12 N6 ? ? ? 1_555 D DT 6 O4 ? ? C DA 12 D DT 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C DA 13 N1 ? ? ? 1_555 D DT 5 N3 ? ? C DA 13 D DT 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C DA 13 N6 ? ? ? 1_555 D DT 5 O4 ? ? C DA 13 D DT 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C DT 14 N3 ? ? ? 1_555 D DA 4 N1 ? ? C DT 14 D DA 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C DT 14 O4 ? ? ? 1_555 D DA 4 N6 ? ? C DT 14 D DA 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C DC 15 N3 ? ? ? 1_555 D DG 3 N1 ? ? C DC 15 D DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C DC 15 N4 ? ? ? 1_555 D DG 3 O6 ? ? C DC 15 D DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C DC 15 O2 ? ? ? 1_555 D DG 3 N2 ? ? C DC 15 D DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? C DT 16 N3 ? ? ? 1_555 D DA 2 N1 ? ? C DT 16 D DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? C DT 16 O4 ? ? ? 1_555 D DA 2 N6 ? ? C DT 16 D DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? C DC 17 N3 ? ? ? 1_555 D DG 1 N1 ? ? C DC 17 D DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? C DC 17 N4 ? ? ? 1_555 D DG 1 O6 ? ? C DC 17 D DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? C DC 17 O2 ? ? ? 1_555 D DG 1 N2 ? ? C DC 17 D DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 17 ? A CYS 21 ? 1_555 ZN ? E ZN . ? A ZN 101 ? 1_555 SG ? A CYS 20 ? A CYS 24 ? 1_555 89.5 ? 2 SG ? A CYS 17 ? A CYS 21 ? 1_555 ZN ? E ZN . ? A ZN 101 ? 1_555 ND1 ? A HIS 49 ? A HIS 53 ? 1_555 118.2 ? 3 SG ? A CYS 20 ? A CYS 24 ? 1_555 ZN ? E ZN . ? A ZN 101 ? 1_555 ND1 ? A HIS 49 ? A HIS 53 ? 1_555 100.5 ? 4 SG ? A CYS 17 ? A CYS 21 ? 1_555 ZN ? E ZN . ? A ZN 101 ? 1_555 SG ? A CYS 52 ? A CYS 56 ? 1_555 106.3 ? 5 SG ? A CYS 20 ? A CYS 24 ? 1_555 ZN ? E ZN . ? A ZN 101 ? 1_555 SG ? A CYS 52 ? A CYS 56 ? 1_555 111.0 ? 6 ND1 ? A HIS 49 ? A HIS 53 ? 1_555 ZN ? E ZN . ? A ZN 101 ? 1_555 SG ? A CYS 52 ? A CYS 56 ? 1_555 125.0 ? 7 SG ? B CYS 17 ? B CYS 21 ? 1_555 ZN ? F ZN . ? B ZN 101 ? 1_555 SG ? B CYS 20 ? B CYS 24 ? 1_555 103.7 ? 8 SG ? B CYS 17 ? B CYS 21 ? 1_555 ZN ? F ZN . ? B ZN 101 ? 1_555 ND1 ? B HIS 49 ? B HIS 53 ? 1_555 104.8 ? 9 SG ? B CYS 20 ? B CYS 24 ? 1_555 ZN ? F ZN . ? B ZN 101 ? 1_555 ND1 ? B HIS 49 ? B HIS 53 ? 1_555 101.3 ? 10 SG ? B CYS 17 ? B CYS 21 ? 1_555 ZN ? F ZN . ? B ZN 101 ? 1_555 SG ? B CYS 52 ? B CYS 56 ? 1_555 108.8 ? 11 SG ? B CYS 20 ? B CYS 24 ? 1_555 ZN ? F ZN . ? B ZN 101 ? 1_555 SG ? B CYS 52 ? B CYS 56 ? 1_555 109.9 ? 12 ND1 ? B HIS 49 ? B HIS 53 ? 1_555 ZN ? F ZN . ? B ZN 101 ? 1_555 SG ? B CYS 52 ? B CYS 56 ? 1_555 126.1 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LYS A 43 ? HIS A 49 ? LYS A 47 HIS A 53 AA1 2 LEU A 29 ? GLN A 36 ? LEU A 33 GLN A 40 AA1 3 TYR A 5 ? TYR A 9 ? TYR A 9 TYR A 13 AA1 4 VAL A 67 ? ASP A 68 ? VAL A 71 ASP A 72 AA2 1 LYS B 43 ? HIS B 49 ? LYS B 47 HIS B 53 AA2 2 LEU B 29 ? GLN B 36 ? LEU B 33 GLN B 40 AA2 3 TYR B 5 ? TYR B 9 ? TYR B 9 TYR B 13 AA2 4 VAL B 67 ? ASP B 68 ? VAL B 71 ASP B 72 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O VAL A 44 ? O VAL A 48 N VAL A 35 ? N VAL A 39 AA1 2 3 O ALA A 32 ? O ALA A 36 N ARG A 6 ? N ARG A 10 AA1 3 4 N TYR A 5 ? N TYR A 9 O ASP A 68 ? O ASP A 72 AA2 1 2 O VAL B 44 ? O VAL B 48 N VAL B 35 ? N VAL B 39 AA2 2 3 O ALA B 32 ? O ALA B 36 N ARG B 6 ? N ARG B 10 AA2 3 4 N VAL B 7 ? N VAL B 11 O ASP B 68 ? O ASP B 72 # _pdbx_entry_details.entry_id 9UMF _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 12 ? ? -175.82 -179.53 2 1 ALA A 19 ? ? -39.72 123.54 3 1 LYS A 23 ? ? -108.11 -75.57 4 1 SER A 25 ? ? 60.15 75.06 5 1 ASP A 31 ? ? 65.75 -8.69 6 1 GLU B 12 ? ? -173.81 -177.68 7 1 ALA B 19 ? ? -38.15 122.78 8 1 LYS B 23 ? ? -111.92 -73.95 9 1 SER B 25 ? ? 63.93 63.69 10 1 ASP B 31 ? ? 66.07 -9.15 11 1 ASP B 45 ? ? -58.14 80.72 12 1 ASP B 68 ? ? -24.74 -67.74 13 1 GLU B 76 ? ? -157.13 35.80 # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 0.8848 -11.1879 -11.9956 0.0172 ? -0.0002 ? 0.0009 ? 0.0380 ? 0.0012 ? 0.0254 ? 0.3594 ? 0.2579 ? -0.0118 ? 1.2326 ? 0.1766 ? 0.1621 ? -0.0145 ? -0.0172 ? -0.0212 ? -0.0452 ? 0.0039 ? -0.0373 ? -0.0087 ? -0.0018 ? 0.0106 ? 2 'X-RAY DIFFRACTION' ? refined 10.5198 -27.8238 -68.1875 0.0076 ? -0.0033 ? 0.0062 ? 0.0727 ? 0.0027 ? 0.0112 ? 0.2670 ? -0.0978 ? 0.1408 ? 0.8186 ? -0.2442 ? 0.2686 ? -0.0347 ? 0.0252 ? -0.0137 ? 0.0466 ? 0.0350 ? 0.0181 ? -0.0197 ? -0.0102 ? -0.0003 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? A 6 ? ? ? A 91 ? ? ? 2 'X-RAY DIFFRACTION' 2 ? ? B 5 ? ? ? B 91 ? ? ? # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id SER _pdbx_unobs_or_zero_occ_residues.auth_seq_id 5 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id SER _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASP N N N N 41 ASP CA C N S 42 ASP C C N N 43 ASP O O N N 44 ASP CB C N N 45 ASP CG C N N 46 ASP OD1 O N N 47 ASP OD2 O N N 48 ASP OXT O N N 49 ASP H H N N 50 ASP H2 H N N 51 ASP HA H N N 52 ASP HB2 H N N 53 ASP HB3 H N N 54 ASP HD2 H N N 55 ASP HXT H N N 56 CYS N N N N 57 CYS CA C N R 58 CYS C C N N 59 CYS O O N N 60 CYS CB C N N 61 CYS SG S N N 62 CYS OXT O N N 63 CYS H H N N 64 CYS H2 H N N 65 CYS HA H N N 66 CYS HB2 H N N 67 CYS HB3 H N N 68 CYS HG H N N 69 CYS HXT H N N 70 DA OP3 O N N 71 DA P P N N 72 DA OP1 O N N 73 DA OP2 O N N 74 DA "O5'" O N N 75 DA "C5'" C N N 76 DA "C4'" C N R 77 DA "O4'" O N N 78 DA "C3'" C N S 79 DA "O3'" O N N 80 DA "C2'" C N N 81 DA "C1'" C N R 82 DA N9 N Y N 83 DA C8 C Y N 84 DA N7 N Y N 85 DA C5 C Y N 86 DA C6 C Y N 87 DA N6 N N N 88 DA N1 N Y N 89 DA C2 C Y N 90 DA N3 N Y N 91 DA C4 C Y N 92 DA HOP3 H N N 93 DA HOP2 H N N 94 DA "H5'" H N N 95 DA "H5''" H N N 96 DA "H4'" H N N 97 DA "H3'" H N N 98 DA "HO3'" H N N 99 DA "H2'" H N N 100 DA "H2''" H N N 101 DA "H1'" H N N 102 DA H8 H N N 103 DA H61 H N N 104 DA H62 H N N 105 DA H2 H N N 106 DC OP3 O N N 107 DC P P N N 108 DC OP1 O N N 109 DC OP2 O N N 110 DC "O5'" O N N 111 DC "C5'" C N N 112 DC "C4'" C N R 113 DC "O4'" O N N 114 DC "C3'" C N S 115 DC "O3'" O N N 116 DC "C2'" C N N 117 DC "C1'" C N R 118 DC N1 N N N 119 DC C2 C N N 120 DC O2 O N N 121 DC N3 N N N 122 DC C4 C N N 123 DC N4 N N N 124 DC C5 C N N 125 DC C6 C N N 126 DC HOP3 H N N 127 DC HOP2 H N N 128 DC "H5'" H N N 129 DC "H5''" H N N 130 DC "H4'" H N N 131 DC "H3'" H N N 132 DC "HO3'" H N N 133 DC "H2'" H N N 134 DC "H2''" H N N 135 DC "H1'" H N N 136 DC H41 H N N 137 DC H42 H N N 138 DC H5 H N N 139 DC H6 H N N 140 DG OP3 O N N 141 DG P P N N 142 DG OP1 O N N 143 DG OP2 O N N 144 DG "O5'" O N N 145 DG "C5'" C N N 146 DG "C4'" C N R 147 DG "O4'" O N N 148 DG "C3'" C N S 149 DG "O3'" O N N 150 DG "C2'" C N N 151 DG "C1'" C N R 152 DG N9 N Y N 153 DG C8 C Y N 154 DG N7 N Y N 155 DG C5 C Y N 156 DG C6 C N N 157 DG O6 O N N 158 DG N1 N N N 159 DG C2 C N N 160 DG N2 N N N 161 DG N3 N N N 162 DG C4 C Y N 163 DG HOP3 H N N 164 DG HOP2 H N N 165 DG "H5'" H N N 166 DG "H5''" H N N 167 DG "H4'" H N N 168 DG "H3'" H N N 169 DG "HO3'" H N N 170 DG "H2'" H N N 171 DG "H2''" H N N 172 DG "H1'" H N N 173 DG H8 H N N 174 DG H1 H N N 175 DG H21 H N N 176 DG H22 H N N 177 DT OP3 O N N 178 DT P P N N 179 DT OP1 O N N 180 DT OP2 O N N 181 DT "O5'" O N N 182 DT "C5'" C N N 183 DT "C4'" C N R 184 DT "O4'" O N N 185 DT "C3'" C N S 186 DT "O3'" O N N 187 DT "C2'" C N N 188 DT "C1'" C N R 189 DT N1 N N N 190 DT C2 C N N 191 DT O2 O N N 192 DT N3 N N N 193 DT C4 C N N 194 DT O4 O N N 195 DT C5 C N N 196 DT C7 C N N 197 DT C6 C N N 198 DT HOP3 H N N 199 DT HOP2 H N N 200 DT "H5'" H N N 201 DT "H5''" H N N 202 DT "H4'" H N N 203 DT "H3'" H N N 204 DT "HO3'" H N N 205 DT "H2'" H N N 206 DT "H2''" H N N 207 DT "H1'" H N N 208 DT H3 H N N 209 DT H71 H N N 210 DT H72 H N N 211 DT H73 H N N 212 DT H6 H N N 213 GLN N N N N 214 GLN CA C N S 215 GLN C C N N 216 GLN O O N N 217 GLN CB C N N 218 GLN CG C N N 219 GLN CD C N N 220 GLN OE1 O N N 221 GLN NE2 N N N 222 GLN OXT O N N 223 GLN H H N N 224 GLN H2 H N N 225 GLN HA H N N 226 GLN HB2 H N N 227 GLN HB3 H N N 228 GLN HG2 H N N 229 GLN HG3 H N N 230 GLN HE21 H N N 231 GLN HE22 H N N 232 GLN HXT H N N 233 GLU N N N N 234 GLU CA C N S 235 GLU C C N N 236 GLU O O N N 237 GLU CB C N N 238 GLU CG C N N 239 GLU CD C N N 240 GLU OE1 O N N 241 GLU OE2 O N N 242 GLU OXT O N N 243 GLU H H N N 244 GLU H2 H N N 245 GLU HA H N N 246 GLU HB2 H N N 247 GLU HB3 H N N 248 GLU HG2 H N N 249 GLU HG3 H N N 250 GLU HE2 H N N 251 GLU HXT H N N 252 GLY N N N N 253 GLY CA C N N 254 GLY C C N N 255 GLY O O N N 256 GLY OXT O N N 257 GLY H H N N 258 GLY H2 H N N 259 GLY HA2 H N N 260 GLY HA3 H N N 261 GLY HXT H N N 262 HIS N N N N 263 HIS CA C N S 264 HIS C C N N 265 HIS O O N N 266 HIS CB C N N 267 HIS CG C Y N 268 HIS ND1 N Y N 269 HIS CD2 C Y N 270 HIS CE1 C Y N 271 HIS NE2 N Y N 272 HIS OXT O N N 273 HIS H H N N 274 HIS H2 H N N 275 HIS HA H N N 276 HIS HB2 H N N 277 HIS HB3 H N N 278 HIS HD1 H N N 279 HIS HD2 H N N 280 HIS HE1 H N N 281 HIS HE2 H N N 282 HIS HXT H N N 283 HOH O O N N 284 HOH H1 H N N 285 HOH H2 H N N 286 ILE N N N N 287 ILE CA C N S 288 ILE C C N N 289 ILE O O N N 290 ILE CB C N S 291 ILE CG1 C N N 292 ILE CG2 C N N 293 ILE CD1 C N N 294 ILE OXT O N N 295 ILE H H N N 296 ILE H2 H N N 297 ILE HA H N N 298 ILE HB H N N 299 ILE HG12 H N N 300 ILE HG13 H N N 301 ILE HG21 H N N 302 ILE HG22 H N N 303 ILE HG23 H N N 304 ILE HD11 H N N 305 ILE HD12 H N N 306 ILE HD13 H N N 307 ILE HXT H N N 308 LEU N N N N 309 LEU CA C N S 310 LEU C C N N 311 LEU O O N N 312 LEU CB C N N 313 LEU CG C N N 314 LEU CD1 C N N 315 LEU CD2 C N N 316 LEU OXT O N N 317 LEU H H N N 318 LEU H2 H N N 319 LEU HA H N N 320 LEU HB2 H N N 321 LEU HB3 H N N 322 LEU HG H N N 323 LEU HD11 H N N 324 LEU HD12 H N N 325 LEU HD13 H N N 326 LEU HD21 H N N 327 LEU HD22 H N N 328 LEU HD23 H N N 329 LEU HXT H N N 330 LYS N N N N 331 LYS CA C N S 332 LYS C C N N 333 LYS O O N N 334 LYS CB C N N 335 LYS CG C N N 336 LYS CD C N N 337 LYS CE C N N 338 LYS NZ N N N 339 LYS OXT O N N 340 LYS H H N N 341 LYS H2 H N N 342 LYS HA H N N 343 LYS HB2 H N N 344 LYS HB3 H N N 345 LYS HG2 H N N 346 LYS HG3 H N N 347 LYS HD2 H N N 348 LYS HD3 H N N 349 LYS HE2 H N N 350 LYS HE3 H N N 351 LYS HZ1 H N N 352 LYS HZ2 H N N 353 LYS HZ3 H N N 354 LYS HXT H N N 355 MET N N N N 356 MET CA C N S 357 MET C C N N 358 MET O O N N 359 MET CB C N N 360 MET CG C N N 361 MET SD S N N 362 MET CE C N N 363 MET OXT O N N 364 MET H H N N 365 MET H2 H N N 366 MET HA H N N 367 MET HB2 H N N 368 MET HB3 H N N 369 MET HG2 H N N 370 MET HG3 H N N 371 MET HE1 H N N 372 MET HE2 H N N 373 MET HE3 H N N 374 MET HXT H N N 375 PHE N N N N 376 PHE CA C N S 377 PHE C C N N 378 PHE O O N N 379 PHE CB C N N 380 PHE CG C Y N 381 PHE CD1 C Y N 382 PHE CD2 C Y N 383 PHE CE1 C Y N 384 PHE CE2 C Y N 385 PHE CZ C Y N 386 PHE OXT O N N 387 PHE H H N N 388 PHE H2 H N N 389 PHE HA H N N 390 PHE HB2 H N N 391 PHE HB3 H N N 392 PHE HD1 H N N 393 PHE HD2 H N N 394 PHE HE1 H N N 395 PHE HE2 H N N 396 PHE HZ H N N 397 PHE HXT H N N 398 PRO N N N N 399 PRO CA C N S 400 PRO C C N N 401 PRO O O N N 402 PRO CB C N N 403 PRO CG C N N 404 PRO CD C N N 405 PRO OXT O N N 406 PRO H H N N 407 PRO HA H N N 408 PRO HB2 H N N 409 PRO HB3 H N N 410 PRO HG2 H N N 411 PRO HG3 H N N 412 PRO HD2 H N N 413 PRO HD3 H N N 414 PRO HXT H N N 415 SER N N N N 416 SER CA C N S 417 SER C C N N 418 SER O O N N 419 SER CB C N N 420 SER OG O N N 421 SER OXT O N N 422 SER H H N N 423 SER H2 H N N 424 SER HA H N N 425 SER HB2 H N N 426 SER HB3 H N N 427 SER HG H N N 428 SER HXT H N N 429 THR N N N N 430 THR CA C N S 431 THR C C N N 432 THR O O N N 433 THR CB C N R 434 THR OG1 O N N 435 THR CG2 C N N 436 THR OXT O N N 437 THR H H N N 438 THR H2 H N N 439 THR HA H N N 440 THR HB H N N 441 THR HG1 H N N 442 THR HG21 H N N 443 THR HG22 H N N 444 THR HG23 H N N 445 THR HXT H N N 446 TRP N N N N 447 TRP CA C N S 448 TRP C C N N 449 TRP O O N N 450 TRP CB C N N 451 TRP CG C Y N 452 TRP CD1 C Y N 453 TRP CD2 C Y N 454 TRP NE1 N Y N 455 TRP CE2 C Y N 456 TRP CE3 C Y N 457 TRP CZ2 C Y N 458 TRP CZ3 C Y N 459 TRP CH2 C Y N 460 TRP OXT O N N 461 TRP H H N N 462 TRP H2 H N N 463 TRP HA H N N 464 TRP HB2 H N N 465 TRP HB3 H N N 466 TRP HD1 H N N 467 TRP HE1 H N N 468 TRP HE3 H N N 469 TRP HZ2 H N N 470 TRP HZ3 H N N 471 TRP HH2 H N N 472 TRP HXT H N N 473 TYR N N N N 474 TYR CA C N S 475 TYR C C N N 476 TYR O O N N 477 TYR CB C N N 478 TYR CG C Y N 479 TYR CD1 C Y N 480 TYR CD2 C Y N 481 TYR CE1 C Y N 482 TYR CE2 C Y N 483 TYR CZ C Y N 484 TYR OH O N N 485 TYR OXT O N N 486 TYR H H N N 487 TYR H2 H N N 488 TYR HA H N N 489 TYR HB2 H N N 490 TYR HB3 H N N 491 TYR HD1 H N N 492 TYR HD2 H N N 493 TYR HE1 H N N 494 TYR HE2 H N N 495 TYR HH H N N 496 TYR HXT H N N 497 VAL N N N N 498 VAL CA C N S 499 VAL C C N N 500 VAL O O N N 501 VAL CB C N N 502 VAL CG1 C N N 503 VAL CG2 C N N 504 VAL OXT O N N 505 VAL H H N N 506 VAL H2 H N N 507 VAL HA H N N 508 VAL HB H N N 509 VAL HG11 H N N 510 VAL HG12 H N N 511 VAL HG13 H N N 512 VAL HG21 H N N 513 VAL HG22 H N N 514 VAL HG23 H N N 515 VAL HXT H N N 516 ZN ZN ZN N N 517 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASP N CA sing N N 39 ASP N H sing N N 40 ASP N H2 sing N N 41 ASP CA C sing N N 42 ASP CA CB sing N N 43 ASP CA HA sing N N 44 ASP C O doub N N 45 ASP C OXT sing N N 46 ASP CB CG sing N N 47 ASP CB HB2 sing N N 48 ASP CB HB3 sing N N 49 ASP CG OD1 doub N N 50 ASP CG OD2 sing N N 51 ASP OD2 HD2 sing N N 52 ASP OXT HXT sing N N 53 CYS N CA sing N N 54 CYS N H sing N N 55 CYS N H2 sing N N 56 CYS CA C sing N N 57 CYS CA CB sing N N 58 CYS CA HA sing N N 59 CYS C O doub N N 60 CYS C OXT sing N N 61 CYS CB SG sing N N 62 CYS CB HB2 sing N N 63 CYS CB HB3 sing N N 64 CYS SG HG sing N N 65 CYS OXT HXT sing N N 66 DA OP3 P sing N N 67 DA OP3 HOP3 sing N N 68 DA P OP1 doub N N 69 DA P OP2 sing N N 70 DA P "O5'" sing N N 71 DA OP2 HOP2 sing N N 72 DA "O5'" "C5'" sing N N 73 DA "C5'" "C4'" sing N N 74 DA "C5'" "H5'" sing N N 75 DA "C5'" "H5''" sing N N 76 DA "C4'" "O4'" sing N N 77 DA "C4'" "C3'" sing N N 78 DA "C4'" "H4'" sing N N 79 DA "O4'" "C1'" sing N N 80 DA "C3'" "O3'" sing N N 81 DA "C3'" "C2'" sing N N 82 DA "C3'" "H3'" sing N N 83 DA "O3'" "HO3'" sing N N 84 DA "C2'" "C1'" sing N N 85 DA "C2'" "H2'" sing N N 86 DA "C2'" "H2''" sing N N 87 DA "C1'" N9 sing N N 88 DA "C1'" "H1'" sing N N 89 DA N9 C8 sing Y N 90 DA N9 C4 sing Y N 91 DA C8 N7 doub Y N 92 DA C8 H8 sing N N 93 DA N7 C5 sing Y N 94 DA C5 C6 sing Y N 95 DA C5 C4 doub Y N 96 DA C6 N6 sing N N 97 DA C6 N1 doub Y N 98 DA N6 H61 sing N N 99 DA N6 H62 sing N N 100 DA N1 C2 sing Y N 101 DA C2 N3 doub Y N 102 DA C2 H2 sing N N 103 DA N3 C4 sing Y N 104 DC OP3 P sing N N 105 DC OP3 HOP3 sing N N 106 DC P OP1 doub N N 107 DC P OP2 sing N N 108 DC P "O5'" sing N N 109 DC OP2 HOP2 sing N N 110 DC "O5'" "C5'" sing N N 111 DC "C5'" "C4'" sing N N 112 DC "C5'" "H5'" sing N N 113 DC "C5'" "H5''" sing N N 114 DC "C4'" "O4'" sing N N 115 DC "C4'" "C3'" sing N N 116 DC "C4'" "H4'" sing N N 117 DC "O4'" "C1'" sing N N 118 DC "C3'" "O3'" sing N N 119 DC "C3'" "C2'" sing N N 120 DC "C3'" "H3'" sing N N 121 DC "O3'" "HO3'" sing N N 122 DC "C2'" "C1'" sing N N 123 DC "C2'" "H2'" sing N N 124 DC "C2'" "H2''" sing N N 125 DC "C1'" N1 sing N N 126 DC "C1'" "H1'" sing N N 127 DC N1 C2 sing N N 128 DC N1 C6 sing N N 129 DC C2 O2 doub N N 130 DC C2 N3 sing N N 131 DC N3 C4 doub N N 132 DC C4 N4 sing N N 133 DC C4 C5 sing N N 134 DC N4 H41 sing N N 135 DC N4 H42 sing N N 136 DC C5 C6 doub N N 137 DC C5 H5 sing N N 138 DC C6 H6 sing N N 139 DG OP3 P sing N N 140 DG OP3 HOP3 sing N N 141 DG P OP1 doub N N 142 DG P OP2 sing N N 143 DG P "O5'" sing N N 144 DG OP2 HOP2 sing N N 145 DG "O5'" "C5'" sing N N 146 DG "C5'" "C4'" sing N N 147 DG "C5'" "H5'" sing N N 148 DG "C5'" "H5''" sing N N 149 DG "C4'" "O4'" sing N N 150 DG "C4'" "C3'" sing N N 151 DG "C4'" "H4'" sing N N 152 DG "O4'" "C1'" sing N N 153 DG "C3'" "O3'" sing N N 154 DG "C3'" "C2'" sing N N 155 DG "C3'" "H3'" sing N N 156 DG "O3'" "HO3'" sing N N 157 DG "C2'" "C1'" sing N N 158 DG "C2'" "H2'" sing N N 159 DG "C2'" "H2''" sing N N 160 DG "C1'" N9 sing N N 161 DG "C1'" "H1'" sing N N 162 DG N9 C8 sing Y N 163 DG N9 C4 sing Y N 164 DG C8 N7 doub Y N 165 DG C8 H8 sing N N 166 DG N7 C5 sing Y N 167 DG C5 C6 sing N N 168 DG C5 C4 doub Y N 169 DG C6 O6 doub N N 170 DG C6 N1 sing N N 171 DG N1 C2 sing N N 172 DG N1 H1 sing N N 173 DG C2 N2 sing N N 174 DG C2 N3 doub N N 175 DG N2 H21 sing N N 176 DG N2 H22 sing N N 177 DG N3 C4 sing N N 178 DT OP3 P sing N N 179 DT OP3 HOP3 sing N N 180 DT P OP1 doub N N 181 DT P OP2 sing N N 182 DT P "O5'" sing N N 183 DT OP2 HOP2 sing N N 184 DT "O5'" "C5'" sing N N 185 DT "C5'" "C4'" sing N N 186 DT "C5'" "H5'" sing N N 187 DT "C5'" "H5''" sing N N 188 DT "C4'" "O4'" sing N N 189 DT "C4'" "C3'" sing N N 190 DT "C4'" "H4'" sing N N 191 DT "O4'" "C1'" sing N N 192 DT "C3'" "O3'" sing N N 193 DT "C3'" "C2'" sing N N 194 DT "C3'" "H3'" sing N N 195 DT "O3'" "HO3'" sing N N 196 DT "C2'" "C1'" sing N N 197 DT "C2'" "H2'" sing N N 198 DT "C2'" "H2''" sing N N 199 DT "C1'" N1 sing N N 200 DT "C1'" "H1'" sing N N 201 DT N1 C2 sing N N 202 DT N1 C6 sing N N 203 DT C2 O2 doub N N 204 DT C2 N3 sing N N 205 DT N3 C4 sing N N 206 DT N3 H3 sing N N 207 DT C4 O4 doub N N 208 DT C4 C5 sing N N 209 DT C5 C7 sing N N 210 DT C5 C6 doub N N 211 DT C7 H71 sing N N 212 DT C7 H72 sing N N 213 DT C7 H73 sing N N 214 DT C6 H6 sing N N 215 GLN N CA sing N N 216 GLN N H sing N N 217 GLN N H2 sing N N 218 GLN CA C sing N N 219 GLN CA CB sing N N 220 GLN CA HA sing N N 221 GLN C O doub N N 222 GLN C OXT sing N N 223 GLN CB CG sing N N 224 GLN CB HB2 sing N N 225 GLN CB HB3 sing N N 226 GLN CG CD sing N N 227 GLN CG HG2 sing N N 228 GLN CG HG3 sing N N 229 GLN CD OE1 doub N N 230 GLN CD NE2 sing N N 231 GLN NE2 HE21 sing N N 232 GLN NE2 HE22 sing N N 233 GLN OXT HXT sing N N 234 GLU N CA sing N N 235 GLU N H sing N N 236 GLU N H2 sing N N 237 GLU CA C sing N N 238 GLU CA CB sing N N 239 GLU CA HA sing N N 240 GLU C O doub N N 241 GLU C OXT sing N N 242 GLU CB CG sing N N 243 GLU CB HB2 sing N N 244 GLU CB HB3 sing N N 245 GLU CG CD sing N N 246 GLU CG HG2 sing N N 247 GLU CG HG3 sing N N 248 GLU CD OE1 doub N N 249 GLU CD OE2 sing N N 250 GLU OE2 HE2 sing N N 251 GLU OXT HXT sing N N 252 GLY N CA sing N N 253 GLY N H sing N N 254 GLY N H2 sing N N 255 GLY CA C sing N N 256 GLY CA HA2 sing N N 257 GLY CA HA3 sing N N 258 GLY C O doub N N 259 GLY C OXT sing N N 260 GLY OXT HXT sing N N 261 HIS N CA sing N N 262 HIS N H sing N N 263 HIS N H2 sing N N 264 HIS CA C sing N N 265 HIS CA CB sing N N 266 HIS CA HA sing N N 267 HIS C O doub N N 268 HIS C OXT sing N N 269 HIS CB CG sing N N 270 HIS CB HB2 sing N N 271 HIS CB HB3 sing N N 272 HIS CG ND1 sing Y N 273 HIS CG CD2 doub Y N 274 HIS ND1 CE1 doub Y N 275 HIS ND1 HD1 sing N N 276 HIS CD2 NE2 sing Y N 277 HIS CD2 HD2 sing N N 278 HIS CE1 NE2 sing Y N 279 HIS CE1 HE1 sing N N 280 HIS NE2 HE2 sing N N 281 HIS OXT HXT sing N N 282 HOH O H1 sing N N 283 HOH O H2 sing N N 284 ILE N CA sing N N 285 ILE N H sing N N 286 ILE N H2 sing N N 287 ILE CA C sing N N 288 ILE CA CB sing N N 289 ILE CA HA sing N N 290 ILE C O doub N N 291 ILE C OXT sing N N 292 ILE CB CG1 sing N N 293 ILE CB CG2 sing N N 294 ILE CB HB sing N N 295 ILE CG1 CD1 sing N N 296 ILE CG1 HG12 sing N N 297 ILE CG1 HG13 sing N N 298 ILE CG2 HG21 sing N N 299 ILE CG2 HG22 sing N N 300 ILE CG2 HG23 sing N N 301 ILE CD1 HD11 sing N N 302 ILE CD1 HD12 sing N N 303 ILE CD1 HD13 sing N N 304 ILE OXT HXT sing N N 305 LEU N CA sing N N 306 LEU N H sing N N 307 LEU N H2 sing N N 308 LEU CA C sing N N 309 LEU CA CB sing N N 310 LEU CA HA sing N N 311 LEU C O doub N N 312 LEU C OXT sing N N 313 LEU CB CG sing N N 314 LEU CB HB2 sing N N 315 LEU CB HB3 sing N N 316 LEU CG CD1 sing N N 317 LEU CG CD2 sing N N 318 LEU CG HG sing N N 319 LEU CD1 HD11 sing N N 320 LEU CD1 HD12 sing N N 321 LEU CD1 HD13 sing N N 322 LEU CD2 HD21 sing N N 323 LEU CD2 HD22 sing N N 324 LEU CD2 HD23 sing N N 325 LEU OXT HXT sing N N 326 LYS N CA sing N N 327 LYS N H sing N N 328 LYS N H2 sing N N 329 LYS CA C sing N N 330 LYS CA CB sing N N 331 LYS CA HA sing N N 332 LYS C O doub N N 333 LYS C OXT sing N N 334 LYS CB CG sing N N 335 LYS CB HB2 sing N N 336 LYS CB HB3 sing N N 337 LYS CG CD sing N N 338 LYS CG HG2 sing N N 339 LYS CG HG3 sing N N 340 LYS CD CE sing N N 341 LYS CD HD2 sing N N 342 LYS CD HD3 sing N N 343 LYS CE NZ sing N N 344 LYS CE HE2 sing N N 345 LYS CE HE3 sing N N 346 LYS NZ HZ1 sing N N 347 LYS NZ HZ2 sing N N 348 LYS NZ HZ3 sing N N 349 LYS OXT HXT sing N N 350 MET N CA sing N N 351 MET N H sing N N 352 MET N H2 sing N N 353 MET CA C sing N N 354 MET CA CB sing N N 355 MET CA HA sing N N 356 MET C O doub N N 357 MET C OXT sing N N 358 MET CB CG sing N N 359 MET CB HB2 sing N N 360 MET CB HB3 sing N N 361 MET CG SD sing N N 362 MET CG HG2 sing N N 363 MET CG HG3 sing N N 364 MET SD CE sing N N 365 MET CE HE1 sing N N 366 MET CE HE2 sing N N 367 MET CE HE3 sing N N 368 MET OXT HXT sing N N 369 PHE N CA sing N N 370 PHE N H sing N N 371 PHE N H2 sing N N 372 PHE CA C sing N N 373 PHE CA CB sing N N 374 PHE CA HA sing N N 375 PHE C O doub N N 376 PHE C OXT sing N N 377 PHE CB CG sing N N 378 PHE CB HB2 sing N N 379 PHE CB HB3 sing N N 380 PHE CG CD1 doub Y N 381 PHE CG CD2 sing Y N 382 PHE CD1 CE1 sing Y N 383 PHE CD1 HD1 sing N N 384 PHE CD2 CE2 doub Y N 385 PHE CD2 HD2 sing N N 386 PHE CE1 CZ doub Y N 387 PHE CE1 HE1 sing N N 388 PHE CE2 CZ sing Y N 389 PHE CE2 HE2 sing N N 390 PHE CZ HZ sing N N 391 PHE OXT HXT sing N N 392 PRO N CA sing N N 393 PRO N CD sing N N 394 PRO N H sing N N 395 PRO CA C sing N N 396 PRO CA CB sing N N 397 PRO CA HA sing N N 398 PRO C O doub N N 399 PRO C OXT sing N N 400 PRO CB CG sing N N 401 PRO CB HB2 sing N N 402 PRO CB HB3 sing N N 403 PRO CG CD sing N N 404 PRO CG HG2 sing N N 405 PRO CG HG3 sing N N 406 PRO CD HD2 sing N N 407 PRO CD HD3 sing N N 408 PRO OXT HXT sing N N 409 SER N CA sing N N 410 SER N H sing N N 411 SER N H2 sing N N 412 SER CA C sing N N 413 SER CA CB sing N N 414 SER CA HA sing N N 415 SER C O doub N N 416 SER C OXT sing N N 417 SER CB OG sing N N 418 SER CB HB2 sing N N 419 SER CB HB3 sing N N 420 SER OG HG sing N N 421 SER OXT HXT sing N N 422 THR N CA sing N N 423 THR N H sing N N 424 THR N H2 sing N N 425 THR CA C sing N N 426 THR CA CB sing N N 427 THR CA HA sing N N 428 THR C O doub N N 429 THR C OXT sing N N 430 THR CB OG1 sing N N 431 THR CB CG2 sing N N 432 THR CB HB sing N N 433 THR OG1 HG1 sing N N 434 THR CG2 HG21 sing N N 435 THR CG2 HG22 sing N N 436 THR CG2 HG23 sing N N 437 THR OXT HXT sing N N 438 TRP N CA sing N N 439 TRP N H sing N N 440 TRP N H2 sing N N 441 TRP CA C sing N N 442 TRP CA CB sing N N 443 TRP CA HA sing N N 444 TRP C O doub N N 445 TRP C OXT sing N N 446 TRP CB CG sing N N 447 TRP CB HB2 sing N N 448 TRP CB HB3 sing N N 449 TRP CG CD1 doub Y N 450 TRP CG CD2 sing Y N 451 TRP CD1 NE1 sing Y N 452 TRP CD1 HD1 sing N N 453 TRP CD2 CE2 doub Y N 454 TRP CD2 CE3 sing Y N 455 TRP NE1 CE2 sing Y N 456 TRP NE1 HE1 sing N N 457 TRP CE2 CZ2 sing Y N 458 TRP CE3 CZ3 doub Y N 459 TRP CE3 HE3 sing N N 460 TRP CZ2 CH2 doub Y N 461 TRP CZ2 HZ2 sing N N 462 TRP CZ3 CH2 sing Y N 463 TRP CZ3 HZ3 sing N N 464 TRP CH2 HH2 sing N N 465 TRP OXT HXT sing N N 466 TYR N CA sing N N 467 TYR N H sing N N 468 TYR N H2 sing N N 469 TYR CA C sing N N 470 TYR CA CB sing N N 471 TYR CA HA sing N N 472 TYR C O doub N N 473 TYR C OXT sing N N 474 TYR CB CG sing N N 475 TYR CB HB2 sing N N 476 TYR CB HB3 sing N N 477 TYR CG CD1 doub Y N 478 TYR CG CD2 sing Y N 479 TYR CD1 CE1 sing Y N 480 TYR CD1 HD1 sing N N 481 TYR CD2 CE2 doub Y N 482 TYR CD2 HD2 sing N N 483 TYR CE1 CZ doub Y N 484 TYR CE1 HE1 sing N N 485 TYR CE2 CZ sing Y N 486 TYR CE2 HE2 sing N N 487 TYR CZ OH sing N N 488 TYR OH HH sing N N 489 TYR OXT HXT sing N N 490 VAL N CA sing N N 491 VAL N H sing N N 492 VAL N H2 sing N N 493 VAL CA C sing N N 494 VAL CA CB sing N N 495 VAL CA HA sing N N 496 VAL C O doub N N 497 VAL C OXT sing N N 498 VAL CB CG1 sing N N 499 VAL CB CG2 sing N N 500 VAL CB HB sing N N 501 VAL CG1 HG11 sing N N 502 VAL CG1 HG12 sing N N 503 VAL CG1 HG13 sing N N 504 VAL CG2 HG21 sing N N 505 VAL CG2 HG22 sing N N 506 VAL CG2 HG23 sing N N 507 VAL OXT HXT sing N N 508 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 9UMF 'double helix' 9UMF 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DG 1 1_555 D DC 17 1_555 -0.847 -0.373 -0.319 -2.783 1.018 -3.641 1 C_DG1:DC34_D C 1 ? D 34 ? 19 1 1 C DA 2 1_555 D DT 16 1_555 0.441 -0.104 0.073 8.289 3.314 -0.986 2 C_DA2:DT33_D C 2 ? D 33 ? 20 1 1 C DG 3 1_555 D DC 15 1_555 0.463 0.036 0.246 12.210 -5.620 -1.384 3 C_DG3:DC32_D C 3 ? D 32 ? 19 1 1 C DA 4 1_555 D DT 14 1_555 0.178 -0.258 -0.270 14.736 -15.651 1.370 4 C_DA4:DT31_D C 4 ? D 31 ? 20 1 1 C DA 5 1_555 D DT 13 1_555 -0.304 -0.181 0.091 -1.707 -13.436 -0.296 5 C_DA5:DT30_D C 5 ? D 30 ? 20 1 1 C DC 6 1_555 D DG 12 1_555 -0.019 -0.056 0.065 -6.247 -11.467 2.834 6 C_DC6:DG29_D C 6 ? D 29 ? 19 1 1 C DC 7 1_555 D DG 11 1_555 0.258 -0.202 0.596 -15.231 -9.599 -1.380 7 C_DC7:DG28_D C 7 ? D 28 ? 19 1 1 C DC 8 1_555 D DG 10 1_555 -0.131 -0.078 -0.056 -6.176 -10.909 -1.105 8 C_DC8:DG27_D C 8 ? D 27 ? 19 1 1 C DC 9 1_555 D DG 9 1_555 0.500 -0.308 -0.095 -1.509 -8.677 -0.996 9 C_DC9:DG26_D C 9 ? D 26 ? 19 1 1 C DG 10 1_555 D DC 8 1_555 -0.820 -0.396 0.657 0.722 -1.593 -1.428 10 C_DG10:DC25_D C 10 ? D 25 ? 19 1 1 C DC 11 1_555 D DG 7 1_555 0.135 -0.146 0.234 4.538 -4.852 2.360 11 C_DC11:DG24_D C 11 ? D 24 ? 19 1 1 C DA 12 1_555 D DT 6 1_555 0.306 -0.128 0.223 -0.090 -4.162 -4.258 12 C_DA12:DT23_D C 12 ? D 23 ? 20 1 1 C DA 13 1_555 D DT 5 1_555 0.725 -0.197 0.362 -0.636 -2.014 -4.072 13 C_DA13:DT22_D C 13 ? D 22 ? 20 1 1 C DT 14 1_555 D DA 4 1_555 0.263 -0.375 0.599 -5.326 -0.085 -0.907 14 C_DT14:DA21_D C 14 ? D 21 ? 20 1 1 C DC 15 1_555 D DG 3 1_555 -0.196 -0.090 0.577 -6.095 4.397 1.481 15 C_DC15:DG20_D C 15 ? D 20 ? 19 1 1 C DT 16 1_555 D DA 2 1_555 -0.037 -0.202 0.253 -0.626 4.873 -3.902 16 C_DT16:DA19_D C 16 ? D 19 ? 20 1 1 C DC 17 1_555 D DG 1 1_555 0.530 -0.138 0.082 3.023 -1.003 -1.450 17 C_DC17:DG18_D C 17 ? D 18 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DG 1 1_555 D DC 17 1_555 C DA 2 1_555 D DT 16 1_555 -0.113 -0.370 3.120 -0.570 1.190 42.455 -0.626 0.101 3.110 1.642 0.787 42.474 1 CC_DG1DA2:DT33DC34_DD C 1 ? D 34 ? C 2 ? D 33 ? 1 C DA 2 1_555 D DT 16 1_555 C DG 3 1_555 D DC 15 1_555 0.501 -0.423 3.221 -0.416 2.195 28.772 -1.328 -1.097 3.173 4.409 0.835 28.857 2 CC_DA2DG3:DC32DT33_DD C 2 ? D 33 ? C 3 ? D 32 ? 1 C DG 3 1_555 D DC 15 1_555 C DA 4 1_555 D DT 14 1_555 -0.222 -0.330 3.160 5.243 0.986 40.130 -0.583 0.885 3.099 1.429 -7.600 40.468 3 CC_DG3DA4:DT31DC32_DD C 3 ? D 32 ? C 4 ? D 31 ? 1 C DA 4 1_555 D DT 14 1_555 C DA 5 1_555 D DT 13 1_555 0.338 -0.475 3.535 -3.030 -0.086 29.477 -0.910 -1.349 3.485 -0.168 5.936 29.629 4 CC_DA4DA5:DT30DT31_DD C 4 ? D 31 ? C 5 ? D 30 ? 1 C DA 5 1_555 D DT 13 1_555 C DC 6 1_555 D DG 12 1_555 0.542 -0.713 3.339 1.093 -2.631 36.047 -0.767 -0.715 3.395 -4.244 -1.763 36.156 5 CC_DA5DC6:DG29DT30_DD C 5 ? D 30 ? C 6 ? D 29 ? 1 C DC 6 1_555 D DG 12 1_555 C DC 7 1_555 D DG 11 1_555 -0.250 -0.327 3.520 -3.623 1.273 39.612 -0.640 -0.086 3.517 1.874 5.330 39.790 6 CC_DC6DC7:DG28DG29_DD C 6 ? D 29 ? C 7 ? D 28 ? 1 C DC 7 1_555 D DG 11 1_555 C DC 8 1_555 D DG 10 1_555 -0.280 0.325 2.892 3.699 1.699 34.414 0.314 0.971 2.860 2.860 -6.225 34.647 7 CC_DC7DC8:DG27DG28_DD C 7 ? D 28 ? C 8 ? D 27 ? 1 C DC 8 1_555 D DG 10 1_555 C DC 9 1_555 D DG 9 1_555 0.226 1.579 3.387 3.137 -1.898 37.459 2.701 0.069 3.314 -2.946 -4.870 37.632 8 CC_DC8DC9:DG26DG27_DD C 8 ? D 27 ? C 9 ? D 26 ? 1 C DC 9 1_555 D DG 9 1_555 C DG 10 1_555 D DC 8 1_555 0.249 0.671 3.236 -3.858 1.756 27.321 0.982 -1.451 3.207 3.688 8.106 27.642 9 CC_DC9DG10:DC25DG26_DD C 9 ? D 26 ? C 10 ? D 25 ? 1 C DG 10 1_555 D DC 8 1_555 C DC 11 1_555 D DG 7 1_555 0.491 -0.299 3.222 4.042 1.602 35.791 -0.709 -0.225 3.240 2.594 -6.547 36.046 10 CC_DG10DC11:DG24DC25_DD C 10 ? D 25 ? C 11 ? D 24 ? 1 C DC 11 1_555 D DG 7 1_555 C DA 12 1_555 D DT 6 1_555 0.032 -0.922 3.185 1.845 0.606 37.545 -1.507 0.184 3.168 0.941 -2.865 37.593 11 CC_DC11DA12:DT23DG24_DD C 11 ? D 24 ? C 12 ? D 23 ? 1 C DA 12 1_555 D DT 6 1_555 C DA 13 1_555 D DT 5 1_555 -0.109 -0.913 3.229 0.869 -6.337 37.050 -0.582 0.284 3.331 -9.882 -1.354 37.579 12 CC_DA12DA13:DT22DT23_DD C 12 ? D 23 ? C 13 ? D 22 ? 1 C DA 13 1_555 D DT 5 1_555 C DT 14 1_555 D DA 4 1_555 0.137 -1.078 3.330 -0.908 -5.085 31.034 -0.995 -0.430 3.453 -9.422 1.682 31.450 13 CC_DA13DT14:DA21DT22_DD C 13 ? D 22 ? C 14 ? D 21 ? 1 C DT 14 1_555 D DA 4 1_555 C DC 15 1_555 D DG 3 1_555 0.633 -0.859 3.171 1.398 -1.619 35.676 -1.171 -0.835 3.227 -2.640 -2.280 35.738 14 CC_DT14DC15:DG20DA21_DD C 14 ? D 21 ? C 15 ? D 20 ? 1 C DC 15 1_555 D DG 3 1_555 C DT 16 1_555 D DA 2 1_555 -0.900 -0.565 3.174 3.615 1.620 31.602 -1.310 2.267 3.023 2.960 -6.605 31.843 15 CC_DC15DT16:DA19DG20_DD C 15 ? D 20 ? C 16 ? D 19 ? 1 C DT 16 1_555 D DA 2 1_555 C DC 17 1_555 D DG 1 1_555 0.375 -0.914 3.143 0.748 0.014 34.825 -1.528 -0.517 3.150 0.023 -1.250 34.833 16 CC_DT16DC17:DG18DA19_DD C 16 ? D 19 ? C 17 ? D 18 ? # _pdbx_audit_support.funding_organization 'Not funded' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3OD8 _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 9UMF _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.032902 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.027479 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.003254 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P S ZN # loop_ # loop_ #