HEADER VIRAL PROTEIN/IMMUNE SYSTEM 24-APR-25 9UO0 TITLE CRYSTAL STRUCTURE OF NANOBODY TNB165 WITH MERS-COV RBD COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPIKE GLYCOPROTEIN; COMPND 3 CHAIN: M; COMPND 4 SYNONYM: S GLYCOPROTEIN,E2,PEPLOMER PROTEIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: TNB165; COMPND 8 CHAIN: 3; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MIDDLE EAST RESPIRATORY SYNDROME-RELATED SOURCE 3 CORONAVIRUS; SOURCE 4 ORGANISM_TAXID: 1335626; SOURCE 5 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 9 ORGANISM_COMMON: HUMAN; SOURCE 10 ORGANISM_TAXID: 9606; SOURCE 11 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS MERS-COV, NANOBODY, VIRAL PROTEIN-IMMUNE SYSTEM COMPLEX, VIRAL KEYWDS 2 PROTEIN/IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR X.WANG,Z.LIN REVDAT 1 29-APR-26 9UO0 0 JRNL AUTH X.WANG,Z.LIN JRNL TITL CRYSTAL STRUCTURE OF NANOBODY TNB165 WITH MERS-COV RBD JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX V.1.18.2 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.66 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 19576 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.226 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 925 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9UO0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 29-APR-25. REMARK 100 THE DEPOSITION ID IS D_1300058869. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-NOV-24 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL02U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 S 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19650 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 40.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 38.40 REMARK 200 R MERGE (I) : 0.05300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.56 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 3.15900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES PH6.5, 15% V/V PEG 550 MME, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 78.56000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 157.12000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 117.84000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 196.40000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 39.28000 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 78.56000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 157.12000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 196.40000 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 117.84000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 39.28000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: M, 3 REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS M 589 REMARK 465 HIS M 590 REMARK 465 HIS M 591 REMARK 465 HIS M 592 REMARK 465 HIS M 593 REMARK 465 HIS M 594 REMARK 465 HIS 3 124 REMARK 465 HIS 3 125 REMARK 465 HIS 3 126 REMARK 465 HIS 3 127 REMARK 465 HIS 3 128 REMARK 465 HIS 3 129 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND2 ASN M 398 O HOH M 701 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CZ2 TRP M 535 OE1 GLN 3 118 6555 1.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU M 456 36.81 -99.59 REMARK 500 LYS M 496 169.04 175.38 REMARK 500 ASP M 510 18.65 59.46 REMARK 500 THR M 579 -71.17 -67.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH M 737 DISTANCE = 57.48 ANGSTROMS DBREF1 9UO0 M 381 588 UNP A0A0A7E6A4_MERS DBREF2 9UO0 M A0A0A7E6A4 381 588 DBREF 9UO0 3 1 129 PDB 9UO0 9UO0 1 129 SEQADV 9UO0 HIS M 589 UNP A0A0A7E6A EXPRESSION TAG SEQADV 9UO0 HIS M 590 UNP A0A0A7E6A EXPRESSION TAG SEQADV 9UO0 HIS M 591 UNP A0A0A7E6A EXPRESSION TAG SEQADV 9UO0 HIS M 592 UNP A0A0A7E6A EXPRESSION TAG SEQADV 9UO0 HIS M 593 UNP A0A0A7E6A EXPRESSION TAG SEQADV 9UO0 HIS M 594 UNP A0A0A7E6A EXPRESSION TAG SEQRES 1 M 214 VAL GLU CYS ASP PHE SER PRO LEU LEU SER GLY THR PRO SEQRES 2 M 214 PRO GLN VAL TYR ASN PHE LYS ARG LEU VAL PHE THR ASN SEQRES 3 M 214 CYS ASN TYR ASN LEU THR LYS LEU LEU SER LEU PHE SER SEQRES 4 M 214 VAL ASN ASP PHE THR CYS SER GLN ILE SER PRO ALA ALA SEQRES 5 M 214 ILE ALA SER ASN CYS TYR SER SER LEU ILE LEU ASP TYR SEQRES 6 M 214 PHE SER TYR PRO LEU SER MET LYS SER ASP LEU SER VAL SEQRES 7 M 214 SER SER ALA GLY PRO ILE SER GLN PHE ASN TYR LYS GLN SEQRES 8 M 214 SER PHE SER ASN PRO THR CYS LEU ILE LEU ALA THR VAL SEQRES 9 M 214 PRO HIS ASN LEU THR THR ILE THR LYS PRO LEU LYS TYR SEQRES 10 M 214 SER TYR ILE ASN LYS CYS SER ARG LEU LEU SER ASP ASP SEQRES 11 M 214 ARG THR GLU VAL PRO GLN LEU VAL ASN ALA ASN GLN TYR SEQRES 12 M 214 SER PRO CYS VAL SER ILE VAL PRO SER THR VAL TRP GLU SEQRES 13 M 214 ASP GLY ASP TYR TYR ARG LYS GLN LEU SER PRO LEU GLU SEQRES 14 M 214 GLY GLY GLY TRP LEU VAL ALA SER GLY SER THR VAL ALA SEQRES 15 M 214 MET THR GLU GLN LEU GLN MET GLY PHE GLY ILE THR VAL SEQRES 16 M 214 GLN TYR GLY THR ASP THR ASN SER VAL CYS PRO LYS LEU SEQRES 17 M 214 HIS HIS HIS HIS HIS HIS SEQRES 1 3 129 GLU VAL GLN VAL VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 3 129 GLU GLY GLU SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 3 129 ARG THR PHE ASN THR TYR ALA GLY GLY TRP PHE ARG GLN SEQRES 4 3 129 ALA PRO GLY LYS GLU ARG GLU PHE VAL ALA ALA ILE THR SEQRES 5 3 129 TRP ILE GLU ASP ARG THR TYR TYR ALA ASP SER VAL LYS SEQRES 6 3 129 GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN MET SEQRES 7 3 129 VAL HIS LEU GLN LEU ASN SER LEU LYS ARG GLU ASP THR SEQRES 8 3 129 ALA VAL TYR TYR CYS ALA MET HIS TRP SER GLY ASP TYR SEQRES 9 3 129 LEU HIS GLU THR SER TYR ASP TYR TRP GLY GLN GLY THR SEQRES 10 3 129 GLN VAL THR VAL SER SER HIS HIS HIS HIS HIS HIS HET NAG M 601 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 3 NAG C8 H15 N O6 FORMUL 4 HOH *63(H2 O) HELIX 1 AA1 PHE M 385 SER M 390 1 6 HELIX 2 AA2 GLN M 395 PHE M 399 5 5 HELIX 3 AA3 ASN M 410 LEU M 417 1 8 HELIX 4 AA4 SER M 429 ALA M 434 1 6 HELIX 5 AA5 PRO M 449 SER M 457 5 9 HELIX 6 AA6 GLY M 462 ASN M 468 1 7 HELIX 7 AA7 SER M 524 ILE M 529 5 6 HELIX 8 AA8 ASP 3 62 LYS 3 65 5 4 HELIX 9 AA9 LYS 3 87 THR 3 91 5 5 HELIX 10 AB1 HIS 3 106 THR 3 108 5 3 SHEET 1 AA1 5 LYS M 400 PHE M 404 0 SHEET 2 AA1 5 SER M 440 SER M 447 -1 O LEU M 443 N LEU M 402 SHEET 3 AA1 5 GLN M 568 GLN M 576 -1 O GLY M 572 N ASP M 444 SHEET 4 AA1 5 THR M 477 THR M 483 -1 N ALA M 482 O MET M 569 SHEET 5 AA1 5 SER M 419 SER M 426 -1 N SER M 426 O THR M 477 SHEET 1 AA2 2 CYS M 407 TYR M 409 0 SHEET 2 AA2 2 VAL M 584 PRO M 586 1 O CYS M 585 N TYR M 409 SHEET 1 AA3 5 TYR M 540 GLN M 544 0 SHEET 2 AA3 5 TRP M 553 ALA M 562 -1 O LEU M 554 N LYS M 543 SHEET 3 AA3 5 LYS M 496 LEU M 506 -1 N LEU M 506 O TRP M 553 SHEET 4 AA3 5 THR M 512 PRO M 515 -1 O VAL M 514 N ARG M 505 SHEET 5 AA3 5 GLY 3 102 ASP 3 103 -1 O GLY 3 102 N GLU M 513 SHEET 1 AA4 4 GLN 3 3 SER 3 7 0 SHEET 2 AA4 4 LEU 3 18 SER 3 25 -1 O ALA 3 23 N VAL 3 5 SHEET 3 AA4 4 MET 3 78 LEU 3 83 -1 O LEU 3 83 N LEU 3 18 SHEET 4 AA4 4 THR 3 69 ASP 3 73 -1 N THR 3 69 O GLN 3 82 SHEET 1 AA5 6 GLY 3 10 GLN 3 13 0 SHEET 2 AA5 6 THR 3 117 SER 3 122 1 O THR 3 120 N VAL 3 12 SHEET 3 AA5 6 ALA 3 92 HIS 3 99 -1 N TYR 3 94 O THR 3 117 SHEET 4 AA5 6 GLY 3 34 GLN 3 39 -1 N PHE 3 37 O TYR 3 95 SHEET 5 AA5 6 GLU 3 46 ILE 3 51 -1 O ALA 3 49 N TRP 3 36 SHEET 6 AA5 6 THR 3 58 TYR 3 60 -1 O TYR 3 59 N ALA 3 50 SHEET 1 AA6 4 GLY 3 10 GLN 3 13 0 SHEET 2 AA6 4 THR 3 117 SER 3 122 1 O THR 3 120 N VAL 3 12 SHEET 3 AA6 4 ALA 3 92 HIS 3 99 -1 N TYR 3 94 O THR 3 117 SHEET 4 AA6 4 TYR 3 110 TRP 3 113 -1 O TYR 3 112 N MET 3 98 SSBOND 1 CYS M 383 CYS M 407 1555 1555 2.04 SSBOND 2 CYS M 425 CYS M 478 1555 1555 2.07 SSBOND 3 CYS M 437 CYS M 585 1555 1555 2.02 SSBOND 4 CYS M 503 CYS M 526 1555 1555 2.04 SSBOND 5 CYS 3 22 CYS 3 96 1555 1555 2.05 LINK ND2 ASN M 410 C1 NAG M 601 1555 1555 1.45 CRYST1 88.100 88.100 235.680 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011351 0.006553 0.000000 0.00000 SCALE2 0.000000 0.013107 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004243 0.00000 CONECT 22 215 CONECT 215 22 CONECT 243 2588 CONECT 361 761 CONECT 440 1584 CONECT 761 361 CONECT 960 1141 CONECT 1141 960 CONECT 1584 440 CONECT 1766 2367 CONECT 2367 1766 CONECT 2588 243 2589 2599 CONECT 2589 2588 2590 2596 CONECT 2590 2589 2591 2597 CONECT 2591 2590 2592 2598 CONECT 2592 2591 2593 2599 CONECT 2593 2592 2600 CONECT 2594 2595 2596 2601 CONECT 2595 2594 CONECT 2596 2589 2594 CONECT 2597 2590 CONECT 2598 2591 CONECT 2599 2588 2592 CONECT 2600 2593 CONECT 2601 2594 MASTER 300 0 1 10 26 0 0 6 2662 2 25 27 END