data_9VAF # _entry.id 9VAF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.413 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9VAF pdb_00009vaf 10.2210/pdb9vaf/pdb WWPDB D_1300060295 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2026-04-29 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9VAF _pdbx_database_status.recvd_initial_deposition_date 2025-06-03 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 2 _pdbx_contact_author.email ando.natsuno.z0@s.mail.nagoya-u.ac.jp _pdbx_contact_author.name_first Natsuno _pdbx_contact_author.name_last Ando _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0009-0007-7347-7896 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Ando, N.' 1 ? 'Hanazono, Y.' 2 ? 'Ito, N.' 3 ? 'Hiroaki, H.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title ;Intrinsically Dominant Conformational Diversity in PDZ1 within the Tandem PDZ1-PDZ2 of Human Syntenin-1 Underlined by Crystal Structures. ; _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ando, N.' 1 ? primary 'Hanazono, Y.' 2 ? primary 'Sakuma, K.' 3 ? primary 'Numoto, N.' 4 ? primary 'Tenno, T.' 5 ? primary 'Oshima, A.' 6 ? primary 'Ito, N.' 7 ? primary 'Hiroaki, H.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Syntenin-1 18122.814 2 ? ? ? ? 2 water nat water 18.015 60 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Melanoma differentiation-associated protein 9,MDA-9,Pro-TGF-alpha cytoplasmic domain-interacting protein 18,TACIP18,Scaffold protein Pbp1,Syndecan-binding protein 1 ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GIREVILCKDQDGKIGLRLKSIDNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKITMTI RDRPFERTITMHKDSTGHVGFIFKNGKITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIM PAFIYE ; _entity_poly.pdbx_seq_one_letter_code_can ;GIREVILCKDQDGKIGLRLKSIDNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKITMTI RDRPFERTITMHKDSTGHVGFIFKNGKITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIM PAFIYE ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ILE n 1 3 ARG n 1 4 GLU n 1 5 VAL n 1 6 ILE n 1 7 LEU n 1 8 CYS n 1 9 LYS n 1 10 ASP n 1 11 GLN n 1 12 ASP n 1 13 GLY n 1 14 LYS n 1 15 ILE n 1 16 GLY n 1 17 LEU n 1 18 ARG n 1 19 LEU n 1 20 LYS n 1 21 SER n 1 22 ILE n 1 23 ASP n 1 24 ASN n 1 25 GLY n 1 26 ILE n 1 27 PHE n 1 28 VAL n 1 29 GLN n 1 30 LEU n 1 31 VAL n 1 32 GLN n 1 33 ALA n 1 34 ASN n 1 35 SER n 1 36 PRO n 1 37 ALA n 1 38 SER n 1 39 LEU n 1 40 VAL n 1 41 GLY n 1 42 LEU n 1 43 ARG n 1 44 PHE n 1 45 GLY n 1 46 ASP n 1 47 GLN n 1 48 VAL n 1 49 LEU n 1 50 GLN n 1 51 ILE n 1 52 ASN n 1 53 GLY n 1 54 GLU n 1 55 ASN n 1 56 CYS n 1 57 ALA n 1 58 GLY n 1 59 TRP n 1 60 SER n 1 61 SER n 1 62 ASP n 1 63 LYS n 1 64 ALA n 1 65 HIS n 1 66 LYS n 1 67 VAL n 1 68 LEU n 1 69 LYS n 1 70 GLN n 1 71 ALA n 1 72 PHE n 1 73 GLY n 1 74 GLU n 1 75 LYS n 1 76 ILE n 1 77 THR n 1 78 MET n 1 79 THR n 1 80 ILE n 1 81 ARG n 1 82 ASP n 1 83 ARG n 1 84 PRO n 1 85 PHE n 1 86 GLU n 1 87 ARG n 1 88 THR n 1 89 ILE n 1 90 THR n 1 91 MET n 1 92 HIS n 1 93 LYS n 1 94 ASP n 1 95 SER n 1 96 THR n 1 97 GLY n 1 98 HIS n 1 99 VAL n 1 100 GLY n 1 101 PHE n 1 102 ILE n 1 103 PHE n 1 104 LYS n 1 105 ASN n 1 106 GLY n 1 107 LYS n 1 108 ILE n 1 109 THR n 1 110 SER n 1 111 ILE n 1 112 VAL n 1 113 LYS n 1 114 ASP n 1 115 SER n 1 116 SER n 1 117 ALA n 1 118 ALA n 1 119 ARG n 1 120 ASN n 1 121 GLY n 1 122 LEU n 1 123 LEU n 1 124 THR n 1 125 GLU n 1 126 HIS n 1 127 ASN n 1 128 ILE n 1 129 CYS n 1 130 GLU n 1 131 ILE n 1 132 ASN n 1 133 GLY n 1 134 GLN n 1 135 ASN n 1 136 VAL n 1 137 ILE n 1 138 GLY n 1 139 LEU n 1 140 LYS n 1 141 ASP n 1 142 SER n 1 143 GLN n 1 144 ILE n 1 145 ALA n 1 146 ASP n 1 147 ILE n 1 148 LEU n 1 149 SER n 1 150 THR n 1 151 SER n 1 152 GLY n 1 153 THR n 1 154 VAL n 1 155 VAL n 1 156 THR n 1 157 ILE n 1 158 THR n 1 159 ILE n 1 160 MET n 1 161 PRO n 1 162 ALA n 1 163 PHE n 1 164 ILE n 1 165 TYR n 1 166 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 166 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'SDCBP, MDA9, SYCL' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 111 111 GLY GLY A . n A 1 2 ILE 2 112 112 ILE ILE A . n A 1 3 ARG 3 113 113 ARG ARG A . n A 1 4 GLU 4 114 114 GLU GLU A . n A 1 5 VAL 5 115 115 VAL VAL A . n A 1 6 ILE 6 116 116 ILE ILE A . n A 1 7 LEU 7 117 117 LEU LEU A . n A 1 8 CYS 8 118 118 CYS CYS A . n A 1 9 LYS 9 119 119 LYS LYS A . n A 1 10 ASP 10 120 120 ASP ASP A . n A 1 11 GLN 11 121 121 GLN GLN A . n A 1 12 ASP 12 122 122 ASP ASP A . n A 1 13 GLY 13 123 123 GLY GLY A . n A 1 14 LYS 14 124 124 LYS LYS A . n A 1 15 ILE 15 125 125 ILE ILE A . n A 1 16 GLY 16 126 126 GLY GLY A . n A 1 17 LEU 17 127 127 LEU LEU A . n A 1 18 ARG 18 128 128 ARG ARG A . n A 1 19 LEU 19 129 129 LEU LEU A . n A 1 20 LYS 20 130 130 LYS LYS A . n A 1 21 SER 21 131 131 SER SER A . n A 1 22 ILE 22 132 132 ILE ILE A . n A 1 23 ASP 23 133 133 ASP ASP A . n A 1 24 ASN 24 134 134 ASN ASN A . n A 1 25 GLY 25 135 135 GLY GLY A . n A 1 26 ILE 26 136 136 ILE ILE A . n A 1 27 PHE 27 137 137 PHE PHE A . n A 1 28 VAL 28 138 138 VAL VAL A . n A 1 29 GLN 29 139 139 GLN GLN A . n A 1 30 LEU 30 140 140 LEU LEU A . n A 1 31 VAL 31 141 141 VAL VAL A . n A 1 32 GLN 32 142 142 GLN GLN A . n A 1 33 ALA 33 143 143 ALA ALA A . n A 1 34 ASN 34 144 144 ASN ASN A . n A 1 35 SER 35 145 145 SER SER A . n A 1 36 PRO 36 146 146 PRO PRO A . n A 1 37 ALA 37 147 147 ALA ALA A . n A 1 38 SER 38 148 148 SER SER A . n A 1 39 LEU 39 149 149 LEU LEU A . n A 1 40 VAL 40 150 150 VAL VAL A . n A 1 41 GLY 41 151 151 GLY GLY A . n A 1 42 LEU 42 152 152 LEU LEU A . n A 1 43 ARG 43 153 153 ARG ARG A . n A 1 44 PHE 44 154 154 PHE PHE A . n A 1 45 GLY 45 155 155 GLY GLY A . n A 1 46 ASP 46 156 156 ASP ASP A . n A 1 47 GLN 47 157 157 GLN GLN A . n A 1 48 VAL 48 158 158 VAL VAL A . n A 1 49 LEU 49 159 159 LEU LEU A . n A 1 50 GLN 50 160 160 GLN GLN A . n A 1 51 ILE 51 161 161 ILE ILE A . n A 1 52 ASN 52 162 162 ASN ASN A . n A 1 53 GLY 53 163 163 GLY GLY A . n A 1 54 GLU 54 164 164 GLU GLU A . n A 1 55 ASN 55 165 165 ASN ASN A . n A 1 56 CYS 56 166 166 CYS CYS A . n A 1 57 ALA 57 167 167 ALA ALA A . n A 1 58 GLY 58 168 168 GLY GLY A . n A 1 59 TRP 59 169 169 TRP TRP A . n A 1 60 SER 60 170 170 SER SER A . n A 1 61 SER 61 171 171 SER SER A . n A 1 62 ASP 62 172 172 ASP ASP A . n A 1 63 LYS 63 173 173 LYS LYS A . n A 1 64 ALA 64 174 174 ALA ALA A . n A 1 65 HIS 65 175 175 HIS HIS A . n A 1 66 LYS 66 176 176 LYS LYS A . n A 1 67 VAL 67 177 177 VAL VAL A . n A 1 68 LEU 68 178 178 LEU LEU A . n A 1 69 LYS 69 179 179 LYS LYS A . n A 1 70 GLN 70 180 180 GLN GLN A . n A 1 71 ALA 71 181 181 ALA ALA A . n A 1 72 PHE 72 182 182 PHE PHE A . n A 1 73 GLY 73 183 183 GLY GLY A . n A 1 74 GLU 74 184 184 GLU GLU A . n A 1 75 LYS 75 185 185 LYS LYS A . n A 1 76 ILE 76 186 186 ILE ILE A . n A 1 77 THR 77 187 187 THR THR A . n A 1 78 MET 78 188 188 MET MET A . n A 1 79 THR 79 189 189 THR THR A . n A 1 80 ILE 80 190 190 ILE ILE A . n A 1 81 ARG 81 191 191 ARG ARG A . n A 1 82 ASP 82 192 192 ASP ASP A . n A 1 83 ARG 83 193 193 ARG ARG A . n A 1 84 PRO 84 194 194 PRO PRO A . n A 1 85 PHE 85 195 195 PHE PHE A . n A 1 86 GLU 86 196 196 GLU GLU A . n A 1 87 ARG 87 197 197 ARG ARG A . n A 1 88 THR 88 198 198 THR THR A . n A 1 89 ILE 89 199 199 ILE ILE A . n A 1 90 THR 90 200 200 THR THR A . n A 1 91 MET 91 201 201 MET MET A . n A 1 92 HIS 92 202 202 HIS HIS A . n A 1 93 LYS 93 203 203 LYS LYS A . n A 1 94 ASP 94 204 204 ASP ASP A . n A 1 95 SER 95 205 205 SER SER A . n A 1 96 THR 96 206 206 THR THR A . n A 1 97 GLY 97 207 207 GLY GLY A . n A 1 98 HIS 98 208 208 HIS HIS A . n A 1 99 VAL 99 209 209 VAL VAL A . n A 1 100 GLY 100 210 210 GLY GLY A . n A 1 101 PHE 101 211 211 PHE PHE A . n A 1 102 ILE 102 212 212 ILE ILE A . n A 1 103 PHE 103 213 213 PHE PHE A . n A 1 104 LYS 104 214 214 LYS LYS A . n A 1 105 ASN 105 215 215 ASN ASN A . n A 1 106 GLY 106 216 216 GLY GLY A . n A 1 107 LYS 107 217 217 LYS LYS A . n A 1 108 ILE 108 218 218 ILE ILE A . n A 1 109 THR 109 219 219 THR THR A . n A 1 110 SER 110 220 220 SER SER A . n A 1 111 ILE 111 221 221 ILE ILE A . n A 1 112 VAL 112 222 222 VAL VAL A . n A 1 113 LYS 113 223 223 LYS LYS A . n A 1 114 ASP 114 224 224 ASP ASP A . n A 1 115 SER 115 225 225 SER SER A . n A 1 116 SER 116 226 226 SER SER A . n A 1 117 ALA 117 227 227 ALA ALA A . n A 1 118 ALA 118 228 228 ALA ALA A . n A 1 119 ARG 119 229 229 ARG ARG A . n A 1 120 ASN 120 230 230 ASN ASN A . n A 1 121 GLY 121 231 231 GLY GLY A . n A 1 122 LEU 122 232 232 LEU LEU A . n A 1 123 LEU 123 233 233 LEU LEU A . n A 1 124 THR 124 234 234 THR THR A . n A 1 125 GLU 125 235 235 GLU GLU A . n A 1 126 HIS 126 236 236 HIS HIS A . n A 1 127 ASN 127 237 237 ASN ASN A . n A 1 128 ILE 128 238 238 ILE ILE A . n A 1 129 CYS 129 239 239 CYS CYS A . n A 1 130 GLU 130 240 240 GLU GLU A . n A 1 131 ILE 131 241 241 ILE ILE A . n A 1 132 ASN 132 242 242 ASN ASN A . n A 1 133 GLY 133 243 243 GLY GLY A . n A 1 134 GLN 134 244 244 GLN GLN A . n A 1 135 ASN 135 245 245 ASN ASN A . n A 1 136 VAL 136 246 246 VAL VAL A . n A 1 137 ILE 137 247 247 ILE ILE A . n A 1 138 GLY 138 248 248 GLY GLY A . n A 1 139 LEU 139 249 249 LEU LEU A . n A 1 140 LYS 140 250 250 LYS LYS A . n A 1 141 ASP 141 251 251 ASP ASP A . n A 1 142 SER 142 252 252 SER SER A . n A 1 143 GLN 143 253 253 GLN GLN A . n A 1 144 ILE 144 254 254 ILE ILE A . n A 1 145 ALA 145 255 255 ALA ALA A . n A 1 146 ASP 146 256 256 ASP ASP A . n A 1 147 ILE 147 257 257 ILE ILE A . n A 1 148 LEU 148 258 258 LEU LEU A . n A 1 149 SER 149 259 259 SER SER A . n A 1 150 THR 150 260 260 THR THR A . n A 1 151 SER 151 261 261 SER SER A . n A 1 152 GLY 152 262 262 GLY GLY A . n A 1 153 THR 153 263 263 THR THR A . n A 1 154 VAL 154 264 264 VAL VAL A . n A 1 155 VAL 155 265 265 VAL VAL A . n A 1 156 THR 156 266 266 THR THR A . n A 1 157 ILE 157 267 267 ILE ILE A . n A 1 158 THR 158 268 268 THR THR A . n A 1 159 ILE 159 269 269 ILE ILE A . n A 1 160 MET 160 270 270 MET MET A . n A 1 161 PRO 161 271 271 PRO PRO A . n A 1 162 ALA 162 272 272 ALA ALA A . n A 1 163 PHE 163 273 273 PHE PHE A . n A 1 164 ILE 164 274 274 ILE ILE A . n A 1 165 TYR 165 275 275 TYR TYR A . n A 1 166 GLU 166 276 ? ? ? A . n B 1 1 GLY 1 111 111 GLY GLY B . n B 1 2 ILE 2 112 112 ILE ILE B . n B 1 3 ARG 3 113 113 ARG ARG B . n B 1 4 GLU 4 114 114 GLU GLU B . n B 1 5 VAL 5 115 115 VAL VAL B . n B 1 6 ILE 6 116 116 ILE ILE B . n B 1 7 LEU 7 117 117 LEU LEU B . n B 1 8 CYS 8 118 118 CYS CYS B . n B 1 9 LYS 9 119 119 LYS LYS B . n B 1 10 ASP 10 120 120 ASP ASP B . n B 1 11 GLN 11 121 121 GLN GLN B . n B 1 12 ASP 12 122 122 ASP ASP B . n B 1 13 GLY 13 123 123 GLY GLY B . n B 1 14 LYS 14 124 124 LYS LYS B . n B 1 15 ILE 15 125 125 ILE ILE B . n B 1 16 GLY 16 126 126 GLY GLY B . n B 1 17 LEU 17 127 127 LEU LEU B . n B 1 18 ARG 18 128 128 ARG ARG B . n B 1 19 LEU 19 129 129 LEU LEU B . n B 1 20 LYS 20 130 130 LYS LYS B . n B 1 21 SER 21 131 131 SER SER B . n B 1 22 ILE 22 132 132 ILE ILE B . n B 1 23 ASP 23 133 133 ASP ASP B . n B 1 24 ASN 24 134 134 ASN ASN B . n B 1 25 GLY 25 135 135 GLY GLY B . n B 1 26 ILE 26 136 136 ILE ILE B . n B 1 27 PHE 27 137 137 PHE PHE B . n B 1 28 VAL 28 138 138 VAL VAL B . n B 1 29 GLN 29 139 139 GLN GLN B . n B 1 30 LEU 30 140 140 LEU LEU B . n B 1 31 VAL 31 141 141 VAL VAL B . n B 1 32 GLN 32 142 142 GLN GLN B . n B 1 33 ALA 33 143 143 ALA ALA B . n B 1 34 ASN 34 144 144 ASN ASN B . n B 1 35 SER 35 145 145 SER SER B . n B 1 36 PRO 36 146 146 PRO PRO B . n B 1 37 ALA 37 147 147 ALA ALA B . n B 1 38 SER 38 148 148 SER SER B . n B 1 39 LEU 39 149 149 LEU LEU B . n B 1 40 VAL 40 150 150 VAL VAL B . n B 1 41 GLY 41 151 151 GLY GLY B . n B 1 42 LEU 42 152 152 LEU LEU B . n B 1 43 ARG 43 153 153 ARG ARG B . n B 1 44 PHE 44 154 154 PHE PHE B . n B 1 45 GLY 45 155 155 GLY GLY B . n B 1 46 ASP 46 156 156 ASP ASP B . n B 1 47 GLN 47 157 157 GLN GLN B . n B 1 48 VAL 48 158 158 VAL VAL B . n B 1 49 LEU 49 159 159 LEU LEU B . n B 1 50 GLN 50 160 160 GLN GLN B . n B 1 51 ILE 51 161 161 ILE ILE B . n B 1 52 ASN 52 162 162 ASN ASN B . n B 1 53 GLY 53 163 163 GLY GLY B . n B 1 54 GLU 54 164 164 GLU GLU B . n B 1 55 ASN 55 165 165 ASN ASN B . n B 1 56 CYS 56 166 166 CYS CYS B . n B 1 57 ALA 57 167 167 ALA ALA B . n B 1 58 GLY 58 168 168 GLY GLY B . n B 1 59 TRP 59 169 169 TRP TRP B . n B 1 60 SER 60 170 170 SER SER B . n B 1 61 SER 61 171 171 SER SER B . n B 1 62 ASP 62 172 172 ASP ASP B . n B 1 63 LYS 63 173 173 LYS LYS B . n B 1 64 ALA 64 174 174 ALA ALA B . n B 1 65 HIS 65 175 175 HIS HIS B . n B 1 66 LYS 66 176 176 LYS LYS B . n B 1 67 VAL 67 177 177 VAL VAL B . n B 1 68 LEU 68 178 178 LEU LEU B . n B 1 69 LYS 69 179 179 LYS LYS B . n B 1 70 GLN 70 180 180 GLN GLN B . n B 1 71 ALA 71 181 181 ALA ALA B . n B 1 72 PHE 72 182 182 PHE PHE B . n B 1 73 GLY 73 183 183 GLY GLY B . n B 1 74 GLU 74 184 184 GLU GLU B . n B 1 75 LYS 75 185 185 LYS LYS B . n B 1 76 ILE 76 186 186 ILE ILE B . n B 1 77 THR 77 187 187 THR THR B . n B 1 78 MET 78 188 188 MET MET B . n B 1 79 THR 79 189 189 THR THR B . n B 1 80 ILE 80 190 190 ILE ILE B . n B 1 81 ARG 81 191 191 ARG ARG B . n B 1 82 ASP 82 192 192 ASP ASP B . n B 1 83 ARG 83 193 193 ARG ARG B . n B 1 84 PRO 84 194 194 PRO PRO B . n B 1 85 PHE 85 195 195 PHE PHE B . n B 1 86 GLU 86 196 196 GLU GLU B . n B 1 87 ARG 87 197 197 ARG ARG B . n B 1 88 THR 88 198 198 THR THR B . n B 1 89 ILE 89 199 199 ILE ILE B . n B 1 90 THR 90 200 200 THR THR B . n B 1 91 MET 91 201 201 MET MET B . n B 1 92 HIS 92 202 202 HIS HIS B . n B 1 93 LYS 93 203 203 LYS LYS B . n B 1 94 ASP 94 204 204 ASP ASP B . n B 1 95 SER 95 205 205 SER SER B . n B 1 96 THR 96 206 206 THR THR B . n B 1 97 GLY 97 207 207 GLY GLY B . n B 1 98 HIS 98 208 208 HIS HIS B . n B 1 99 VAL 99 209 209 VAL VAL B . n B 1 100 GLY 100 210 210 GLY GLY B . n B 1 101 PHE 101 211 211 PHE PHE B . n B 1 102 ILE 102 212 212 ILE ILE B . n B 1 103 PHE 103 213 213 PHE PHE B . n B 1 104 LYS 104 214 214 LYS LYS B . n B 1 105 ASN 105 215 215 ASN ASN B . n B 1 106 GLY 106 216 216 GLY GLY B . n B 1 107 LYS 107 217 217 LYS LYS B . n B 1 108 ILE 108 218 218 ILE ILE B . n B 1 109 THR 109 219 219 THR THR B . n B 1 110 SER 110 220 220 SER SER B . n B 1 111 ILE 111 221 221 ILE ILE B . n B 1 112 VAL 112 222 222 VAL VAL B . n B 1 113 LYS 113 223 223 LYS LYS B . n B 1 114 ASP 114 224 224 ASP ASP B . n B 1 115 SER 115 225 225 SER SER B . n B 1 116 SER 116 226 226 SER SER B . n B 1 117 ALA 117 227 227 ALA ALA B . n B 1 118 ALA 118 228 228 ALA ALA B . n B 1 119 ARG 119 229 229 ARG ARG B . n B 1 120 ASN 120 230 230 ASN ASN B . n B 1 121 GLY 121 231 231 GLY GLY B . n B 1 122 LEU 122 232 232 LEU LEU B . n B 1 123 LEU 123 233 233 LEU LEU B . n B 1 124 THR 124 234 234 THR THR B . n B 1 125 GLU 125 235 235 GLU GLU B . n B 1 126 HIS 126 236 236 HIS HIS B . n B 1 127 ASN 127 237 237 ASN ASN B . n B 1 128 ILE 128 238 238 ILE ILE B . n B 1 129 CYS 129 239 239 CYS CYS B . n B 1 130 GLU 130 240 240 GLU GLU B . n B 1 131 ILE 131 241 241 ILE ILE B . n B 1 132 ASN 132 242 242 ASN ASN B . n B 1 133 GLY 133 243 243 GLY GLY B . n B 1 134 GLN 134 244 244 GLN GLN B . n B 1 135 ASN 135 245 245 ASN ASN B . n B 1 136 VAL 136 246 246 VAL VAL B . n B 1 137 ILE 137 247 247 ILE ILE B . n B 1 138 GLY 138 248 248 GLY GLY B . n B 1 139 LEU 139 249 249 LEU LEU B . n B 1 140 LYS 140 250 250 LYS LYS B . n B 1 141 ASP 141 251 251 ASP ASP B . n B 1 142 SER 142 252 252 SER SER B . n B 1 143 GLN 143 253 253 GLN GLN B . n B 1 144 ILE 144 254 254 ILE ILE B . n B 1 145 ALA 145 255 255 ALA ALA B . n B 1 146 ASP 146 256 256 ASP ASP B . n B 1 147 ILE 147 257 257 ILE ILE B . n B 1 148 LEU 148 258 258 LEU LEU B . n B 1 149 SER 149 259 259 SER SER B . n B 1 150 THR 150 260 260 THR THR B . n B 1 151 SER 151 261 261 SER SER B . n B 1 152 GLY 152 262 262 GLY GLY B . n B 1 153 THR 153 263 263 THR THR B . n B 1 154 VAL 154 264 264 VAL VAL B . n B 1 155 VAL 155 265 265 VAL VAL B . n B 1 156 THR 156 266 266 THR THR B . n B 1 157 ILE 157 267 267 ILE ILE B . n B 1 158 THR 158 268 268 THR THR B . n B 1 159 ILE 159 269 269 ILE ILE B . n B 1 160 MET 160 270 270 MET MET B . n B 1 161 PRO 161 271 271 PRO PRO B . n B 1 162 ALA 162 272 272 ALA ALA B . n B 1 163 PHE 163 273 273 PHE PHE B . n B 1 164 ILE 164 274 274 ILE ILE B . n B 1 165 TYR 165 275 275 TYR TYR B . n B 1 166 GLU 166 276 276 GLU GLU B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 301 26 HOH HOH A . C 2 HOH 2 302 16 HOH HOH A . C 2 HOH 3 303 30 HOH HOH A . C 2 HOH 4 304 28 HOH HOH A . C 2 HOH 5 305 4 HOH HOH A . C 2 HOH 6 306 17 HOH HOH A . C 2 HOH 7 307 13 HOH HOH A . C 2 HOH 8 308 21 HOH HOH A . C 2 HOH 9 309 10 HOH HOH A . C 2 HOH 10 310 14 HOH HOH A . C 2 HOH 11 311 27 HOH HOH A . C 2 HOH 12 312 44 HOH HOH A . C 2 HOH 13 313 23 HOH HOH A . C 2 HOH 14 314 35 HOH HOH A . C 2 HOH 15 315 6 HOH HOH A . C 2 HOH 16 316 11 HOH HOH A . C 2 HOH 17 317 58 HOH HOH A . C 2 HOH 18 318 2 HOH HOH A . C 2 HOH 19 319 25 HOH HOH A . C 2 HOH 20 320 34 HOH HOH A . C 2 HOH 21 321 42 HOH HOH A . C 2 HOH 22 322 70 HOH HOH A . C 2 HOH 23 323 3 HOH HOH A . C 2 HOH 24 324 9 HOH HOH A . C 2 HOH 25 325 78 HOH HOH A . C 2 HOH 26 326 60 HOH HOH A . C 2 HOH 27 327 51 HOH HOH A . C 2 HOH 28 328 80 HOH HOH A . C 2 HOH 29 329 29 HOH HOH A . C 2 HOH 30 330 79 HOH HOH A . C 2 HOH 31 331 56 HOH HOH A . C 2 HOH 32 332 71 HOH HOH A . C 2 HOH 33 333 45 HOH HOH A . D 2 HOH 1 301 20 HOH HOH B . D 2 HOH 2 302 1 HOH HOH B . D 2 HOH 3 303 82 HOH HOH B . D 2 HOH 4 304 22 HOH HOH B . D 2 HOH 5 305 18 HOH HOH B . D 2 HOH 6 306 49 HOH HOH B . D 2 HOH 7 307 12 HOH HOH B . D 2 HOH 8 308 67 HOH HOH B . D 2 HOH 9 309 24 HOH HOH B . D 2 HOH 10 310 15 HOH HOH B . D 2 HOH 11 311 52 HOH HOH B . D 2 HOH 12 312 43 HOH HOH B . D 2 HOH 13 313 7 HOH HOH B . D 2 HOH 14 314 33 HOH HOH B . D 2 HOH 15 315 50 HOH HOH B . D 2 HOH 16 316 8 HOH HOH B . D 2 HOH 17 317 5 HOH HOH B . D 2 HOH 18 318 54 HOH HOH B . D 2 HOH 19 319 36 HOH HOH B . D 2 HOH 20 320 38 HOH HOH B . D 2 HOH 21 321 19 HOH HOH B . D 2 HOH 22 322 39 HOH HOH B . D 2 HOH 23 323 31 HOH HOH B . D 2 HOH 24 324 59 HOH HOH B . D 2 HOH 25 325 41 HOH HOH B . D 2 HOH 26 326 40 HOH HOH B . D 2 HOH 27 327 68 HOH HOH B . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_reference_DOI _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1_4487 ? 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . ? 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . ? 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . ? 4 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 9VAF _cell.details ? _cell.formula_units_Z ? _cell.length_a 56.678 _cell.length_a_esd ? _cell.length_b 56.678 _cell.length_b_esd ? _cell.length_c 149.562 _cell.length_c_esd ? _cell.volume 416083.917 _cell.volume_esd ? _cell.Z_PDB 12 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9VAF _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ;P 31 2" ; _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9VAF _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.91 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 35.71 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.2 M sodium chloride, 0.1 M BIS-TRIS, 25% PEG 3,350' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2023-12-05 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.98 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'PHOTON FACTORY BEAMLINE BL-17A' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.98 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL-17A _diffrn_source.pdbx_synchrotron_site 'Photon Factory' # _reflns.B_iso_Wilson_estimate 35.27 _reflns.entry_id 9VAF _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.85 _reflns.d_resolution_low 49.08 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 24661 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 9.7 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 26.6 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.047 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.85 _reflns_shell.d_res_low 1.89 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1525 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 1.144 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 45.60 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9VAF _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.85 _refine.ls_d_res_low 41.03 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 24601 _refine.ls_number_reflns_R_free 1229 _refine.ls_number_reflns_R_work 23372 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.98 _refine.ls_percent_reflns_R_free 5.00 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2738 _refine.ls_R_factor_R_free 0.3206 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2713 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 37.8035 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2471 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.85 _refine_hist.d_res_low 41.03 _refine_hist.number_atoms_solvent 60 _refine_hist.number_atoms_total 2590 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 2530 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_Zscore _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0053 ? 2562 ? f_bond_d ? ? ? 'X-RAY DIFFRACTION' ? 0.9532 ? 3450 ? f_angle_d ? ? ? 'X-RAY DIFFRACTION' ? 0.0570 ? 407 ? f_chiral_restr ? ? ? 'X-RAY DIFFRACTION' ? 0.0058 ? 443 ? f_plane_restr ? ? ? 'X-RAY DIFFRACTION' ? 18.3694 ? 951 ? f_dihedral_angle_d ? ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.correlation_coeff_Fo_to_Fc _refine_ls_shell.correlation_coeff_Fo_to_Fc_free _refine_ls_shell.correlation_coeff_I_to_Fcsqd_work _refine_ls_shell.correlation_coeff_I_to_Fcsqd_free _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 1.85 1.92 . . 136 2560 100.00 . . . . 0.3704 . . . . . . . . . . . . . . . 0.4025 'X-RAY DIFFRACTION' 1.92 2.01 . . 130 2533 100.00 . . . . 0.3155 . . . . . . . . . . . . . . . 0.3567 'X-RAY DIFFRACTION' 2.01 2.12 . . 134 2547 100.00 . . . . 0.3015 . . . . . . . . . . . . . . . 0.3352 'X-RAY DIFFRACTION' 2.12 2.25 . . 134 2574 99.96 . . . . 0.2840 . . . . . . . . . . . . . . . 0.3487 'X-RAY DIFFRACTION' 2.25 2.42 . . 138 2554 100.00 . . . . 0.2829 . . . . . . . . . . . . . . . 0.3564 'X-RAY DIFFRACTION' 2.42 2.67 . . 133 2594 99.96 . . . . 0.3096 . . . . . . . . . . . . . . . 0.3417 'X-RAY DIFFRACTION' 2.67 3.05 . . 138 2595 100.00 . . . . 0.3010 . . . . . . . . . . . . . . . 0.3418 'X-RAY DIFFRACTION' 3.05 3.85 . . 142 2642 100.00 . . . . 0.2658 . . . . . . . . . . . . . . . 0.2784 'X-RAY DIFFRACTION' 3.85 41.03 . . 144 2773 99.90 . . . . 0.2401 . . . . . . . . . . . . . . . 0.3162 # _struct.entry_id 9VAF _struct.title 'Crystal structure of the PDZ tandem of syntenin' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9VAF _struct_keywords.text 'Syntenin-1, PDZ domain, SIGNALING PROTEIN' _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SDCB1_HUMAN _struct_ref.pdbx_db_accession O00560 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GIREVILCKDQDGKIGLRLKSIDNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKITMTI RDRPFERTITMHKDSTGHVGFIFKNGKITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIM PAFIFE ; _struct_ref.pdbx_align_begin 111 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9VAF A 1 ? 166 ? O00560 111 ? 276 ? 111 276 2 1 9VAF B 1 ? 166 ? O00560 111 ? 276 ? 111 276 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 9VAF TYR A 165 ? UNP O00560 PHE 275 'engineered mutation' 275 1 2 9VAF TYR B 165 ? UNP O00560 PHE 275 'engineered mutation' 275 2 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C 2 1 B,D # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 35 ? VAL A 40 ? SER A 145 VAL A 150 1 ? 6 HELX_P HELX_P2 AA2 SER A 60 ? ALA A 71 ? SER A 170 ALA A 181 1 ? 12 HELX_P HELX_P3 AA3 SER A 115 ? GLY A 121 ? SER A 225 GLY A 231 1 ? 7 HELX_P HELX_P4 AA4 LYS A 140 ? THR A 150 ? LYS A 250 THR A 260 1 ? 11 HELX_P HELX_P5 AA5 SER B 35 ? VAL B 40 ? SER B 145 VAL B 150 1 ? 6 HELX_P HELX_P6 AA6 SER B 60 ? VAL B 67 ? SER B 170 VAL B 177 1 ? 8 HELX_P HELX_P7 AA7 LEU B 68 ? GLN B 70 ? LEU B 178 GLN B 180 5 ? 3 HELX_P HELX_P8 AA8 SER B 115 ? ASN B 120 ? SER B 225 ASN B 230 1 ? 6 HELX_P HELX_P9 AA9 LYS B 140 ? SER B 151 ? LYS B 250 SER B 261 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 2 ? AA3 ? 5 ? AA4 ? 4 ? AA5 ? 5 ? AA6 ? 4 ? AA7 ? 4 ? AA8 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA5 4 5 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA6 3 4 ? anti-parallel AA7 1 2 ? anti-parallel AA7 2 3 ? anti-parallel AA7 3 4 ? anti-parallel AA8 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE A 2 ? LEU A 7 ? ILE A 112 LEU A 117 AA1 2 ILE A 76 ? ARG A 81 ? ILE A 186 ARG A 191 AA1 3 GLN A 47 ? ILE A 51 ? GLN A 157 ILE A 161 AA1 4 GLU A 54 ? ASN A 55 ? GLU A 164 ASN A 165 AA2 1 LEU A 17 ? ILE A 22 ? LEU A 127 ILE A 132 AA2 2 GLY A 25 ? VAL A 31 ? GLY A 135 VAL A 141 AA3 1 ARG A 87 ? HIS A 92 ? ARG A 197 HIS A 202 AA3 2 VAL A 154 ? PRO A 161 ? VAL A 264 PRO A 271 AA3 3 HIS A 126 ? ILE A 131 ? HIS A 236 ILE A 241 AA3 4 LYS A 107 ? ILE A 111 ? LYS A 217 ILE A 221 AA3 5 PHE A 101 ? LYS A 104 ? PHE A 211 LYS A 214 AA4 1 ARG A 87 ? HIS A 92 ? ARG A 197 HIS A 202 AA4 2 VAL A 154 ? PRO A 161 ? VAL A 264 PRO A 271 AA4 3 HIS A 126 ? ILE A 131 ? HIS A 236 ILE A 241 AA4 4 GLN A 134 ? ASN A 135 ? GLN A 244 ASN A 245 AA5 1 ILE B 2 ? LEU B 7 ? ILE B 112 LEU B 117 AA5 2 ILE B 76 ? ARG B 81 ? ILE B 186 ARG B 191 AA5 3 GLN B 47 ? ILE B 51 ? GLN B 157 ILE B 161 AA5 4 GLY B 25 ? VAL B 31 ? GLY B 135 VAL B 141 AA5 5 LEU B 17 ? ILE B 22 ? LEU B 127 ILE B 132 AA6 1 ILE B 2 ? LEU B 7 ? ILE B 112 LEU B 117 AA6 2 ILE B 76 ? ARG B 81 ? ILE B 186 ARG B 191 AA6 3 GLN B 47 ? ILE B 51 ? GLN B 157 ILE B 161 AA6 4 GLU B 54 ? ASN B 55 ? GLU B 164 ASN B 165 AA7 1 ARG B 87 ? HIS B 92 ? ARG B 197 HIS B 202 AA7 2 VAL B 154 ? PRO B 161 ? VAL B 264 PRO B 271 AA7 3 HIS B 126 ? ILE B 131 ? HIS B 236 ILE B 241 AA7 4 GLN B 134 ? ASN B 135 ? GLN B 244 ASN B 245 AA8 1 PHE B 101 ? LYS B 104 ? PHE B 211 LYS B 214 AA8 2 LYS B 107 ? ILE B 111 ? LYS B 217 ILE B 221 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ARG A 3 ? N ARG A 113 O ILE A 80 ? O ILE A 190 AA1 2 3 O THR A 79 ? O THR A 189 N LEU A 49 ? N LEU A 159 AA1 3 4 N ILE A 51 ? N ILE A 161 O GLU A 54 ? O GLU A 164 AA2 1 2 N LYS A 20 ? N LYS A 130 O PHE A 27 ? O PHE A 137 AA3 1 2 N MET A 91 ? N MET A 201 O VAL A 155 ? O VAL A 265 AA3 2 3 O THR A 158 ? O THR A 268 N CYS A 129 ? N CYS A 239 AA3 3 4 O HIS A 126 ? O HIS A 236 N ILE A 108 ? N ILE A 218 AA3 4 5 O THR A 109 ? O THR A 219 N ILE A 102 ? N ILE A 212 AA4 1 2 N MET A 91 ? N MET A 201 O VAL A 155 ? O VAL A 265 AA4 2 3 O THR A 158 ? O THR A 268 N CYS A 129 ? N CYS A 239 AA4 3 4 N ILE A 131 ? N ILE A 241 O GLN A 134 ? O GLN A 244 AA5 1 2 N ARG B 3 ? N ARG B 113 O ILE B 80 ? O ILE B 190 AA5 2 3 O THR B 79 ? O THR B 189 N LEU B 49 ? N LEU B 159 AA5 3 4 O VAL B 48 ? O VAL B 158 N ILE B 26 ? N ILE B 136 AA5 4 5 O GLN B 29 ? O GLN B 139 N ARG B 18 ? N ARG B 128 AA6 1 2 N ARG B 3 ? N ARG B 113 O ILE B 80 ? O ILE B 190 AA6 2 3 O THR B 79 ? O THR B 189 N LEU B 49 ? N LEU B 159 AA6 3 4 N ILE B 51 ? N ILE B 161 O GLU B 54 ? O GLU B 164 AA7 1 2 N ARG B 87 ? N ARG B 197 O ILE B 159 ? O ILE B 269 AA7 2 3 O THR B 158 ? O THR B 268 N CYS B 129 ? N CYS B 239 AA7 3 4 N ILE B 131 ? N ILE B 241 O GLN B 134 ? O GLN B 244 AA8 1 2 N LYS B 104 ? N LYS B 214 O LYS B 107 ? O LYS B 217 # _pdbx_entry_details.entry_id 9VAF _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 193 ? ? 20.99 65.46 2 1 ILE A 274 ? ? -85.99 -76.31 3 1 CYS B 118 ? ? -86.87 -72.39 4 1 LYS B 119 ? ? 175.18 175.70 5 1 ARG B 193 ? ? 28.70 67.40 # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -y,x-y,z+1/3 3 -x+y,-x,z+2/3 4 x-y,-y,-z+2/3 5 -x,-x+y,-z+1/3 6 y,x,-z # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id GLU _pdbx_unobs_or_zero_occ_residues.auth_seq_id 276 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id GLU _pdbx_unobs_or_zero_occ_residues.label_seq_id 166 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Japan Society for the Promotion of Science (JSPS)' Japan 24K0214524 1 'Japan Agency for Medical Research and Development (AMED)' Japan 22fk0108527 2 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 8BLU _pdbx_initial_refinement_model.details ? # _space_group.name_H-M_alt 'P 31 2 1' _space_group.name_Hall ;P 31 2" ; _space_group.IT_number 152 _space_group.crystal_system trigonal _space_group.id 1 # _atom_sites.entry_id 9VAF _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.017644 _atom_sites.fract_transf_matrix[1][2] 0.010186 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020373 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006686 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ #