data_9VBS # _entry.id 9VBS # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.408 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9VBS pdb_00009vbs 10.2210/pdb9vbs/pdb WWPDB D_1300060327 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2025-12-10 ? 2 'Structure model' 1 1 2025-12-31 ? 3 'Structure model' 1 2 2026-01-14 ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.year' 3 2 'Structure model' '_citation_author.identifier_ORCID' 4 3 'Structure model' '_citation.year' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9VBS _pdbx_database_status.recvd_initial_deposition_date 2025-06-04 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 2 _pdbx_contact_author.email nn@igm.hokudai.ac.jp _pdbx_contact_author.name_first Nobuo _pdbx_contact_author.name_last Noda _pdbx_contact_author.name_mi N. _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-6940-8069 # _audit_author.name 'Noda, N.N.' _audit_author.pdbx_ordinal 1 _audit_author.identifier_ORCID 0000-0002-6940-8069 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Cell.Sci. _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1477-9137 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 138 _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'ALLO-1a is a ubiquitin-binding adaptor for allophagy in Caenorhabditis elegans.' _citation.year 2025 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1242/jcs.264252 _citation.pdbx_database_id_PubMed 41234204 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Norizuki, T.' 1 ? primary 'Kushida, Y.' 2 ? primary 'Sekimoto, T.' 3 ? primary 'Sasaki, T.' 4 ? primary 'Yamano, K.' 5 ? primary 'Matsuda, N.' 6 ? primary 'Sasaki, R.' 7 ? primary 'Noda, N.N.' 8 ? primary 'Sato, K.' 9 ? primary 'Sato, M.' 10 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Isoform a of Allophagy receptor allo-1' 13136.547 3 ? L282M ? 'Residues 275-388 of ALLO-1a with L282M mutation' 2 water nat water 18.015 11 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ALLO-1a # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPEESERRKMAEDQLKHARGGSVFDPPASFVASQLAERTTYSLNLEHELITLRKELEETKEALKKSVEESSNKDEIVSAL HEDQQESTRMLASNEQVINSLKQKCRQLGVLEDFSS ; _entity_poly.pdbx_seq_one_letter_code_can ;GPEESERRKMAEDQLKHARGGSVFDPPASFVASQLAERTTYSLNLEHELITLRKELEETKEALKKSVEESSNKDEIVSAL HEDQQESTRMLASNEQVINSLKQKCRQLGVLEDFSS ; _entity_poly.pdbx_strand_id A,B,C _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 GLU n 1 4 GLU n 1 5 SER n 1 6 GLU n 1 7 ARG n 1 8 ARG n 1 9 LYS n 1 10 MET n 1 11 ALA n 1 12 GLU n 1 13 ASP n 1 14 GLN n 1 15 LEU n 1 16 LYS n 1 17 HIS n 1 18 ALA n 1 19 ARG n 1 20 GLY n 1 21 GLY n 1 22 SER n 1 23 VAL n 1 24 PHE n 1 25 ASP n 1 26 PRO n 1 27 PRO n 1 28 ALA n 1 29 SER n 1 30 PHE n 1 31 VAL n 1 32 ALA n 1 33 SER n 1 34 GLN n 1 35 LEU n 1 36 ALA n 1 37 GLU n 1 38 ARG n 1 39 THR n 1 40 THR n 1 41 TYR n 1 42 SER n 1 43 LEU n 1 44 ASN n 1 45 LEU n 1 46 GLU n 1 47 HIS n 1 48 GLU n 1 49 LEU n 1 50 ILE n 1 51 THR n 1 52 LEU n 1 53 ARG n 1 54 LYS n 1 55 GLU n 1 56 LEU n 1 57 GLU n 1 58 GLU n 1 59 THR n 1 60 LYS n 1 61 GLU n 1 62 ALA n 1 63 LEU n 1 64 LYS n 1 65 LYS n 1 66 SER n 1 67 VAL n 1 68 GLU n 1 69 GLU n 1 70 SER n 1 71 SER n 1 72 ASN n 1 73 LYS n 1 74 ASP n 1 75 GLU n 1 76 ILE n 1 77 VAL n 1 78 SER n 1 79 ALA n 1 80 LEU n 1 81 HIS n 1 82 GLU n 1 83 ASP n 1 84 GLN n 1 85 GLN n 1 86 GLU n 1 87 SER n 1 88 THR n 1 89 ARG n 1 90 MET n 1 91 LEU n 1 92 ALA n 1 93 SER n 1 94 ASN n 1 95 GLU n 1 96 GLN n 1 97 VAL n 1 98 ILE n 1 99 ASN n 1 100 SER n 1 101 LEU n 1 102 LYS n 1 103 GLN n 1 104 LYS n 1 105 CYS n 1 106 ARG n 1 107 GLN n 1 108 LEU n 1 109 GLY n 1 110 VAL n 1 111 LEU n 1 112 GLU n 1 113 ASP n 1 114 PHE n 1 115 SER n 1 116 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 116 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'allo-1, R102.5' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Caenorhabditis elegans' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 6239 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 273 ? ? ? A . n A 1 2 PRO 2 274 ? ? ? A . n A 1 3 GLU 3 275 ? ? ? A . n A 1 4 GLU 4 276 ? ? ? A . n A 1 5 SER 5 277 ? ? ? A . n A 1 6 GLU 6 278 ? ? ? A . n A 1 7 ARG 7 279 ? ? ? A . n A 1 8 ARG 8 280 ? ? ? A . n A 1 9 LYS 9 281 ? ? ? A . n A 1 10 MET 10 282 ? ? ? A . n A 1 11 ALA 11 283 ? ? ? A . n A 1 12 GLU 12 284 ? ? ? A . n A 1 13 ASP 13 285 ? ? ? A . n A 1 14 GLN 14 286 ? ? ? A . n A 1 15 LEU 15 287 ? ? ? A . n A 1 16 LYS 16 288 ? ? ? A . n A 1 17 HIS 17 289 ? ? ? A . n A 1 18 ALA 18 290 ? ? ? A . n A 1 19 ARG 19 291 ? ? ? A . n A 1 20 GLY 20 292 ? ? ? A . n A 1 21 GLY 21 293 ? ? ? A . n A 1 22 SER 22 294 ? ? ? A . n A 1 23 VAL 23 295 ? ? ? A . n A 1 24 PHE 24 296 ? ? ? A . n A 1 25 ASP 25 297 ? ? ? A . n A 1 26 PRO 26 298 ? ? ? A . n A 1 27 PRO 27 299 ? ? ? A . n A 1 28 ALA 28 300 ? ? ? A . n A 1 29 SER 29 301 ? ? ? A . n A 1 30 PHE 30 302 ? ? ? A . n A 1 31 VAL 31 303 ? ? ? A . n A 1 32 ALA 32 304 ? ? ? A . n A 1 33 SER 33 305 ? ? ? A . n A 1 34 GLN 34 306 ? ? ? A . n A 1 35 LEU 35 307 ? ? ? A . n A 1 36 ALA 36 308 ? ? ? A . n A 1 37 GLU 37 309 ? ? ? A . n A 1 38 ARG 38 310 310 ARG ARG A . n A 1 39 THR 39 311 311 THR THR A . n A 1 40 THR 40 312 312 THR THR A . n A 1 41 TYR 41 313 313 TYR TYR A . n A 1 42 SER 42 314 314 SER SER A . n A 1 43 LEU 43 315 315 LEU LEU A . n A 1 44 ASN 44 316 316 ASN ASN A . n A 1 45 LEU 45 317 317 LEU LEU A . n A 1 46 GLU 46 318 318 GLU GLU A . n A 1 47 HIS 47 319 319 HIS HIS A . n A 1 48 GLU 48 320 320 GLU GLU A . n A 1 49 LEU 49 321 321 LEU LEU A . n A 1 50 ILE 50 322 322 ILE ILE A . n A 1 51 THR 51 323 323 THR THR A . n A 1 52 LEU 52 324 324 LEU LEU A . n A 1 53 ARG 53 325 325 ARG ARG A . n A 1 54 LYS 54 326 326 LYS LYS A . n A 1 55 GLU 55 327 327 GLU GLU A . n A 1 56 LEU 56 328 328 LEU LEU A . n A 1 57 GLU 57 329 329 GLU GLU A . n A 1 58 GLU 58 330 330 GLU GLU A . n A 1 59 THR 59 331 331 THR THR A . n A 1 60 LYS 60 332 332 LYS LYS A . n A 1 61 GLU 61 333 333 GLU GLU A . n A 1 62 ALA 62 334 334 ALA ALA A . n A 1 63 LEU 63 335 335 LEU LEU A . n A 1 64 LYS 64 336 336 LYS LYS A . n A 1 65 LYS 65 337 337 LYS LYS A . n A 1 66 SER 66 338 338 SER SER A . n A 1 67 VAL 67 339 339 VAL VAL A . n A 1 68 GLU 68 340 340 GLU GLU A . n A 1 69 GLU 69 341 341 GLU GLU A . n A 1 70 SER 70 342 342 SER SER A . n A 1 71 SER 71 343 343 SER SER A . n A 1 72 ASN 72 344 344 ASN ASN A . n A 1 73 LYS 73 345 345 LYS LYS A . n A 1 74 ASP 74 346 346 ASP ASP A . n A 1 75 GLU 75 347 347 GLU GLU A . n A 1 76 ILE 76 348 348 ILE ILE A . n A 1 77 VAL 77 349 349 VAL VAL A . n A 1 78 SER 78 350 350 SER SER A . n A 1 79 ALA 79 351 351 ALA ALA A . n A 1 80 LEU 80 352 352 LEU LEU A . n A 1 81 HIS 81 353 353 HIS HIS A . n A 1 82 GLU 82 354 354 GLU GLU A . n A 1 83 ASP 83 355 355 ASP ASP A . n A 1 84 GLN 84 356 356 GLN GLN A . n A 1 85 GLN 85 357 357 GLN GLN A . n A 1 86 GLU 86 358 358 GLU GLU A . n A 1 87 SER 87 359 359 SER SER A . n A 1 88 THR 88 360 360 THR THR A . n A 1 89 ARG 89 361 361 ARG ARG A . n A 1 90 MET 90 362 362 MET MET A . n A 1 91 LEU 91 363 363 LEU LEU A . n A 1 92 ALA 92 364 364 ALA ALA A . n A 1 93 SER 93 365 365 SER SER A . n A 1 94 ASN 94 366 366 ASN ASN A . n A 1 95 GLU 95 367 367 GLU GLU A . n A 1 96 GLN 96 368 368 GLN GLN A . n A 1 97 VAL 97 369 369 VAL VAL A . n A 1 98 ILE 98 370 370 ILE ILE A . n A 1 99 ASN 99 371 371 ASN ASN A . n A 1 100 SER 100 372 372 SER SER A . n A 1 101 LEU 101 373 373 LEU LEU A . n A 1 102 LYS 102 374 374 LYS LYS A . n A 1 103 GLN 103 375 375 GLN GLN A . n A 1 104 LYS 104 376 376 LYS LYS A . n A 1 105 CYS 105 377 377 CYS CYS A . n A 1 106 ARG 106 378 378 ARG ARG A . n A 1 107 GLN 107 379 379 GLN GLN A . n A 1 108 LEU 108 380 380 LEU ALA A . n A 1 109 GLY 109 381 381 GLY GLY A . n A 1 110 VAL 110 382 382 VAL ALA A . n A 1 111 LEU 111 383 ? ? ? A . n A 1 112 GLU 112 384 ? ? ? A . n A 1 113 ASP 113 385 ? ? ? A . n A 1 114 PHE 114 386 ? ? ? A . n A 1 115 SER 115 387 ? ? ? A . n A 1 116 SER 116 388 ? ? ? A . n B 1 1 GLY 1 273 ? ? ? B . n B 1 2 PRO 2 274 ? ? ? B . n B 1 3 GLU 3 275 ? ? ? B . n B 1 4 GLU 4 276 ? ? ? B . n B 1 5 SER 5 277 ? ? ? B . n B 1 6 GLU 6 278 ? ? ? B . n B 1 7 ARG 7 279 ? ? ? B . n B 1 8 ARG 8 280 ? ? ? B . n B 1 9 LYS 9 281 ? ? ? B . n B 1 10 MET 10 282 ? ? ? B . n B 1 11 ALA 11 283 ? ? ? B . n B 1 12 GLU 12 284 ? ? ? B . n B 1 13 ASP 13 285 ? ? ? B . n B 1 14 GLN 14 286 ? ? ? B . n B 1 15 LEU 15 287 ? ? ? B . n B 1 16 LYS 16 288 ? ? ? B . n B 1 17 HIS 17 289 ? ? ? B . n B 1 18 ALA 18 290 ? ? ? B . n B 1 19 ARG 19 291 ? ? ? B . n B 1 20 GLY 20 292 ? ? ? B . n B 1 21 GLY 21 293 ? ? ? B . n B 1 22 SER 22 294 ? ? ? B . n B 1 23 VAL 23 295 ? ? ? B . n B 1 24 PHE 24 296 ? ? ? B . n B 1 25 ASP 25 297 ? ? ? B . n B 1 26 PRO 26 298 ? ? ? B . n B 1 27 PRO 27 299 ? ? ? B . n B 1 28 ALA 28 300 ? ? ? B . n B 1 29 SER 29 301 ? ? ? B . n B 1 30 PHE 30 302 ? ? ? B . n B 1 31 VAL 31 303 ? ? ? B . n B 1 32 ALA 32 304 ? ? ? B . n B 1 33 SER 33 305 ? ? ? B . n B 1 34 GLN 34 306 ? ? ? B . n B 1 35 LEU 35 307 307 LEU ALA B . n B 1 36 ALA 36 308 308 ALA ALA B . n B 1 37 GLU 37 309 309 GLU ALA B . n B 1 38 ARG 38 310 310 ARG ARG B . n B 1 39 THR 39 311 311 THR THR B . n B 1 40 THR 40 312 312 THR THR B . n B 1 41 TYR 41 313 313 TYR TYR B . n B 1 42 SER 42 314 314 SER SER B . n B 1 43 LEU 43 315 315 LEU LEU B . n B 1 44 ASN 44 316 316 ASN ASN B . n B 1 45 LEU 45 317 317 LEU LEU B . n B 1 46 GLU 46 318 318 GLU GLU B . n B 1 47 HIS 47 319 319 HIS HIS B . n B 1 48 GLU 48 320 320 GLU GLU B . n B 1 49 LEU 49 321 321 LEU LEU B . n B 1 50 ILE 50 322 322 ILE ILE B . n B 1 51 THR 51 323 323 THR THR B . n B 1 52 LEU 52 324 324 LEU LEU B . n B 1 53 ARG 53 325 325 ARG ARG B . n B 1 54 LYS 54 326 326 LYS LYS B . n B 1 55 GLU 55 327 327 GLU GLU B . n B 1 56 LEU 56 328 328 LEU LEU B . n B 1 57 GLU 57 329 329 GLU GLU B . n B 1 58 GLU 58 330 330 GLU GLU B . n B 1 59 THR 59 331 331 THR THR B . n B 1 60 LYS 60 332 332 LYS LYS B . n B 1 61 GLU 61 333 333 GLU GLU B . n B 1 62 ALA 62 334 334 ALA ALA B . n B 1 63 LEU 63 335 335 LEU LEU B . n B 1 64 LYS 64 336 336 LYS LYS B . n B 1 65 LYS 65 337 337 LYS LYS B . n B 1 66 SER 66 338 338 SER SER B . n B 1 67 VAL 67 339 339 VAL VAL B . n B 1 68 GLU 68 340 340 GLU GLU B . n B 1 69 GLU 69 341 341 GLU GLU B . n B 1 70 SER 70 342 342 SER SER B . n B 1 71 SER 71 343 343 SER SER B . n B 1 72 ASN 72 344 344 ASN ASN B . n B 1 73 LYS 73 345 345 LYS LYS B . n B 1 74 ASP 74 346 346 ASP ASP B . n B 1 75 GLU 75 347 347 GLU GLU B . n B 1 76 ILE 76 348 348 ILE ILE B . n B 1 77 VAL 77 349 349 VAL VAL B . n B 1 78 SER 78 350 350 SER SER B . n B 1 79 ALA 79 351 351 ALA ALA B . n B 1 80 LEU 80 352 352 LEU LEU B . n B 1 81 HIS 81 353 353 HIS HIS B . n B 1 82 GLU 82 354 354 GLU GLU B . n B 1 83 ASP 83 355 355 ASP ASP B . n B 1 84 GLN 84 356 356 GLN GLN B . n B 1 85 GLN 85 357 357 GLN GLN B . n B 1 86 GLU 86 358 358 GLU GLU B . n B 1 87 SER 87 359 359 SER SER B . n B 1 88 THR 88 360 360 THR THR B . n B 1 89 ARG 89 361 361 ARG ARG B . n B 1 90 MET 90 362 362 MET MET B . n B 1 91 LEU 91 363 363 LEU LEU B . n B 1 92 ALA 92 364 364 ALA ALA B . n B 1 93 SER 93 365 365 SER SER B . n B 1 94 ASN 94 366 366 ASN ASN B . n B 1 95 GLU 95 367 367 GLU GLU B . n B 1 96 GLN 96 368 368 GLN GLN B . n B 1 97 VAL 97 369 369 VAL VAL B . n B 1 98 ILE 98 370 370 ILE ILE B . n B 1 99 ASN 99 371 371 ASN ASN B . n B 1 100 SER 100 372 372 SER SER B . n B 1 101 LEU 101 373 373 LEU LEU B . n B 1 102 LYS 102 374 374 LYS LYS B . n B 1 103 GLN 103 375 375 GLN GLN B . n B 1 104 LYS 104 376 376 LYS ALA B . n B 1 105 CYS 105 377 377 CYS CYS B . n B 1 106 ARG 106 378 378 ARG ALA B . n B 1 107 GLN 107 379 ? ? ? B . n B 1 108 LEU 108 380 ? ? ? B . n B 1 109 GLY 109 381 ? ? ? B . n B 1 110 VAL 110 382 ? ? ? B . n B 1 111 LEU 111 383 ? ? ? B . n B 1 112 GLU 112 384 ? ? ? B . n B 1 113 ASP 113 385 ? ? ? B . n B 1 114 PHE 114 386 ? ? ? B . n B 1 115 SER 115 387 ? ? ? B . n B 1 116 SER 116 388 ? ? ? B . n C 1 1 GLY 1 273 ? ? ? C . n C 1 2 PRO 2 274 ? ? ? C . n C 1 3 GLU 3 275 ? ? ? C . n C 1 4 GLU 4 276 ? ? ? C . n C 1 5 SER 5 277 ? ? ? C . n C 1 6 GLU 6 278 ? ? ? C . n C 1 7 ARG 7 279 ? ? ? C . n C 1 8 ARG 8 280 ? ? ? C . n C 1 9 LYS 9 281 ? ? ? C . n C 1 10 MET 10 282 ? ? ? C . n C 1 11 ALA 11 283 ? ? ? C . n C 1 12 GLU 12 284 ? ? ? C . n C 1 13 ASP 13 285 ? ? ? C . n C 1 14 GLN 14 286 ? ? ? C . n C 1 15 LEU 15 287 ? ? ? C . n C 1 16 LYS 16 288 ? ? ? C . n C 1 17 HIS 17 289 ? ? ? C . n C 1 18 ALA 18 290 ? ? ? C . n C 1 19 ARG 19 291 ? ? ? C . n C 1 20 GLY 20 292 ? ? ? C . n C 1 21 GLY 21 293 ? ? ? C . n C 1 22 SER 22 294 ? ? ? C . n C 1 23 VAL 23 295 ? ? ? C . n C 1 24 PHE 24 296 ? ? ? C . n C 1 25 ASP 25 297 ? ? ? C . n C 1 26 PRO 26 298 ? ? ? C . n C 1 27 PRO 27 299 ? ? ? C . n C 1 28 ALA 28 300 ? ? ? C . n C 1 29 SER 29 301 ? ? ? C . n C 1 30 PHE 30 302 ? ? ? C . n C 1 31 VAL 31 303 ? ? ? C . n C 1 32 ALA 32 304 ? ? ? C . n C 1 33 SER 33 305 ? ? ? C . n C 1 34 GLN 34 306 ? ? ? C . n C 1 35 LEU 35 307 ? ? ? C . n C 1 36 ALA 36 308 308 ALA ALA C . n C 1 37 GLU 37 309 309 GLU ALA C . n C 1 38 ARG 38 310 310 ARG ARG C . n C 1 39 THR 39 311 311 THR THR C . n C 1 40 THR 40 312 312 THR THR C . n C 1 41 TYR 41 313 313 TYR TYR C . n C 1 42 SER 42 314 314 SER SER C . n C 1 43 LEU 43 315 315 LEU LEU C . n C 1 44 ASN 44 316 316 ASN ASN C . n C 1 45 LEU 45 317 317 LEU LEU C . n C 1 46 GLU 46 318 318 GLU GLU C . n C 1 47 HIS 47 319 319 HIS HIS C . n C 1 48 GLU 48 320 320 GLU GLU C . n C 1 49 LEU 49 321 321 LEU LEU C . n C 1 50 ILE 50 322 322 ILE ILE C . n C 1 51 THR 51 323 323 THR THR C . n C 1 52 LEU 52 324 324 LEU LEU C . n C 1 53 ARG 53 325 325 ARG ARG C . n C 1 54 LYS 54 326 326 LYS LYS C . n C 1 55 GLU 55 327 327 GLU GLU C . n C 1 56 LEU 56 328 328 LEU LEU C . n C 1 57 GLU 57 329 329 GLU GLU C . n C 1 58 GLU 58 330 330 GLU GLU C . n C 1 59 THR 59 331 331 THR THR C . n C 1 60 LYS 60 332 332 LYS LYS C . n C 1 61 GLU 61 333 333 GLU GLU C . n C 1 62 ALA 62 334 334 ALA ALA C . n C 1 63 LEU 63 335 335 LEU LEU C . n C 1 64 LYS 64 336 336 LYS LYS C . n C 1 65 LYS 65 337 337 LYS LYS C . n C 1 66 SER 66 338 338 SER SER C . n C 1 67 VAL 67 339 339 VAL VAL C . n C 1 68 GLU 68 340 340 GLU GLU C . n C 1 69 GLU 69 341 341 GLU GLU C . n C 1 70 SER 70 342 342 SER SER C . n C 1 71 SER 71 343 343 SER ALA C . n C 1 72 ASN 72 344 344 ASN ASN C . n C 1 73 LYS 73 345 345 LYS LYS C . n C 1 74 ASP 74 346 346 ASP ASP C . n C 1 75 GLU 75 347 347 GLU GLU C . n C 1 76 ILE 76 348 348 ILE ILE C . n C 1 77 VAL 77 349 349 VAL VAL C . n C 1 78 SER 78 350 350 SER SER C . n C 1 79 ALA 79 351 351 ALA ALA C . n C 1 80 LEU 80 352 352 LEU LEU C . n C 1 81 HIS 81 353 353 HIS HIS C . n C 1 82 GLU 82 354 354 GLU GLU C . n C 1 83 ASP 83 355 355 ASP ASP C . n C 1 84 GLN 84 356 356 GLN GLN C . n C 1 85 GLN 85 357 357 GLN GLN C . n C 1 86 GLU 86 358 358 GLU GLU C . n C 1 87 SER 87 359 359 SER SER C . n C 1 88 THR 88 360 360 THR THR C . n C 1 89 ARG 89 361 361 ARG ARG C . n C 1 90 MET 90 362 362 MET MET C . n C 1 91 LEU 91 363 363 LEU LEU C . n C 1 92 ALA 92 364 364 ALA ALA C . n C 1 93 SER 93 365 365 SER SER C . n C 1 94 ASN 94 366 366 ASN ASN C . n C 1 95 GLU 95 367 367 GLU GLU C . n C 1 96 GLN 96 368 368 GLN GLN C . n C 1 97 VAL 97 369 369 VAL VAL C . n C 1 98 ILE 98 370 370 ILE ILE C . n C 1 99 ASN 99 371 371 ASN ASN C . n C 1 100 SER 100 372 372 SER SER C . n C 1 101 LEU 101 373 373 LEU LEU C . n C 1 102 LYS 102 374 374 LYS LYS C . n C 1 103 GLN 103 375 375 GLN GLN C . n C 1 104 LYS 104 376 376 LYS LYS C . n C 1 105 CYS 105 377 377 CYS CYS C . n C 1 106 ARG 106 378 378 ARG ALA C . n C 1 107 GLN 107 379 ? ? ? C . n C 1 108 LEU 108 380 ? ? ? C . n C 1 109 GLY 109 381 ? ? ? C . n C 1 110 VAL 110 382 ? ? ? C . n C 1 111 LEU 111 383 ? ? ? C . n C 1 112 GLU 112 384 ? ? ? C . n C 1 113 ASP 113 385 ? ? ? C . n C 1 114 PHE 114 386 ? ? ? C . n C 1 115 SER 115 387 ? ? ? C . n C 1 116 SER 116 388 ? ? ? C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 HOH 1 401 1 HOH HOH A . D 2 HOH 2 402 4 HOH HOH A . D 2 HOH 3 403 3 HOH HOH A . D 2 HOH 4 404 6 HOH HOH A . D 2 HOH 5 405 5 HOH HOH A . D 2 HOH 6 406 7 HOH HOH A . D 2 HOH 7 407 10 HOH HOH A . D 2 HOH 8 408 8 HOH HOH A . E 2 HOH 1 401 11 HOH HOH B . E 2 HOH 2 402 9 HOH HOH B . E 2 HOH 3 403 2 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LEU 380 ? CG ? A LEU 108 CG 2 1 Y 1 A LEU 380 ? CD1 ? A LEU 108 CD1 3 1 Y 1 A LEU 380 ? CD2 ? A LEU 108 CD2 4 1 Y 1 A VAL 382 ? CG1 ? A VAL 110 CG1 5 1 Y 1 A VAL 382 ? CG2 ? A VAL 110 CG2 6 1 Y 1 B LEU 307 ? CG ? B LEU 35 CG 7 1 Y 1 B LEU 307 ? CD1 ? B LEU 35 CD1 8 1 Y 1 B LEU 307 ? CD2 ? B LEU 35 CD2 9 1 Y 1 B GLU 309 ? CG ? B GLU 37 CG 10 1 Y 1 B GLU 309 ? CD ? B GLU 37 CD 11 1 Y 1 B GLU 309 ? OE1 ? B GLU 37 OE1 12 1 Y 1 B GLU 309 ? OE2 ? B GLU 37 OE2 13 1 Y 1 B LYS 376 ? CG ? B LYS 104 CG 14 1 Y 1 B LYS 376 ? CD ? B LYS 104 CD 15 1 Y 1 B LYS 376 ? CE ? B LYS 104 CE 16 1 Y 1 B LYS 376 ? NZ ? B LYS 104 NZ 17 1 Y 1 B ARG 378 ? CG ? B ARG 106 CG 18 1 Y 1 B ARG 378 ? CD ? B ARG 106 CD 19 1 Y 1 B ARG 378 ? NE ? B ARG 106 NE 20 1 Y 1 B ARG 378 ? CZ ? B ARG 106 CZ 21 1 Y 1 B ARG 378 ? NH1 ? B ARG 106 NH1 22 1 Y 1 B ARG 378 ? NH2 ? B ARG 106 NH2 23 1 Y 1 C GLU 309 ? CG ? C GLU 37 CG 24 1 Y 1 C GLU 309 ? CD ? C GLU 37 CD 25 1 Y 1 C GLU 309 ? OE1 ? C GLU 37 OE1 26 1 Y 1 C GLU 309 ? OE2 ? C GLU 37 OE2 27 1 Y 1 C SER 343 ? OG ? C SER 71 OG 28 1 Y 1 C ARG 378 ? CG ? C ARG 106 CG 29 1 Y 1 C ARG 378 ? CD ? C ARG 106 CD 30 1 Y 1 C ARG 378 ? NE ? C ARG 106 NE 31 1 Y 1 C ARG 378 ? CZ ? C ARG 106 CZ 32 1 Y 1 C ARG 378 ? NH1 ? C ARG 106 NH1 33 1 Y 1 C ARG 378 ? NH2 ? C ARG 106 NH2 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_reference_DOI _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.12_2829: ???)' ? 1 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? . ? 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . ? 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . ? 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? HKL2Map ? ? ? . ? 5 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9VBS _cell.details ? _cell.formula_units_Z ? _cell.length_a 92.300 _cell.length_a_esd ? _cell.length_b 239.300 _cell.length_b_esd ? _cell.length_c 71.400 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 24 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9VBS _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9VBS _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 5.00 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 75.41 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'sodium formate, sodium acetate' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 9M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-10-06 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9794 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SPRING-8 BEAMLINE BL32XU' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9794 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL32XU _diffrn_source.pdbx_synchrotron_site SPring-8 # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 9VBS _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.40 _reflns.d_resolution_low 46.2 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 59162 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.1 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.33 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 8.41 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.998 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value 0.081 _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.40 _reflns_shell.d_res_low 2.55 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 9384 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.714 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all 97.4 _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9VBS _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.401 _refine.ls_d_res_low 46.15 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 31159 _refine.ls_number_reflns_R_free 1559 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.24 _refine.ls_percent_reflns_R_free 5.00 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2370 _refine.ls_R_factor_R_free 0.2633 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2356 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 34.10 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.42 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1711 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 11 _refine_hist.number_atoms_total 1722 _refine_hist.d_res_high 2.401 _refine_hist.d_res_low 46.15 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_Zscore _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.004 ? 1718 ? f_bond_d ? ? ? 'X-RAY DIFFRACTION' ? 0.578 ? 2302 ? f_angle_d ? ? ? 'X-RAY DIFFRACTION' ? 14.382 ? 1111 ? f_dihedral_angle_d ? ? ? 'X-RAY DIFFRACTION' ? 0.030 ? 275 ? f_chiral_restr ? ? ? 'X-RAY DIFFRACTION' ? 0.002 ? 299 ? f_plane_restr ? ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.correlation_coeff_Fo_to_Fc _refine_ls_shell.correlation_coeff_Fo_to_Fc_free _refine_ls_shell.correlation_coeff_I_to_Fcsqd_work _refine_ls_shell.correlation_coeff_I_to_Fcsqd_free _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 2.401 2.4784 . . 132 2532 95.00 . . . . 0.4398 . . . . . . . . . . . . . . . 0.4402 'X-RAY DIFFRACTION' 2.4784 2.5670 . . 138 2667 99.00 . . . . 0.4057 . . . . . . . . . . . . . . . 0.4023 'X-RAY DIFFRACTION' 2.5670 2.6697 . . 140 2666 100.00 . . . . 0.3730 . . . . . . . . . . . . . . . 0.3694 'X-RAY DIFFRACTION' 2.6697 2.7912 . . 133 2676 100.00 . . . . 0.3728 . . . . . . . . . . . . . . . 0.3976 'X-RAY DIFFRACTION' 2.7912 2.9383 . . 138 2679 100.00 . . . . 0.2980 . . . . . . . . . . . . . . . 0.3175 'X-RAY DIFFRACTION' 2.9383 3.1224 . . 147 2683 100.00 . . . . 0.2759 . . . . . . . . . . . . . . . 0.2947 'X-RAY DIFFRACTION' 3.1224 3.3634 . . 146 2681 100.00 . . . . 0.2887 . . . . . . . . . . . . . . . 0.3192 'X-RAY DIFFRACTION' 3.3634 3.7018 . . 151 2688 100.00 . . . . 0.2343 . . . . . . . . . . . . . . . 0.2370 'X-RAY DIFFRACTION' 3.7018 4.2371 . . 140 2728 100.00 . . . . 0.1856 . . . . . . . . . . . . . . . 0.2274 'X-RAY DIFFRACTION' 4.2371 5.3370 . . 130 2752 100.00 . . . . 0.1841 . . . . . . . . . . . . . . . 0.1943 'X-RAY DIFFRACTION' 5.3370 46.15 . . 164 2848 99.00 . . . . 0.2067 . . . . . . . . . . . . . . . 0.2548 # _struct.entry_id 9VBS _struct.title 'Crystal structure of the coiled-coil of ALLO-1a' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9VBS _struct_keywords.text 'autophagy adaptor, ubiquitin binding, ATG8 binding, PROTEIN BINDING' _struct_keywords.pdbx_keywords 'PROTEIN BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 2 ? E N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code ALLO1_CAEEL _struct_ref.pdbx_db_accession Q9U389 _struct_ref.pdbx_db_isoform Q9U389-2 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;EESERRKLAEDQLKHARGGSVFDPPASFVASQLAERTTYSLNLEHELITLRKELEETKEALKKSVEESSNKDEIVSALHE DQQESTRMLASNEQVINSLKQKCRQLGVLEDFSS ; _struct_ref.pdbx_align_begin 275 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9VBS A 3 ? 116 ? Q9U389 275 ? 388 ? 275 388 2 1 9VBS B 3 ? 116 ? Q9U389 275 ? 388 ? 275 388 3 1 9VBS C 3 ? 116 ? Q9U389 275 ? 388 ? 275 388 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 9VBS GLY A 1 ? UNP Q9U389 ? ? 'expression tag' 273 1 1 9VBS PRO A 2 ? UNP Q9U389 ? ? 'expression tag' 274 2 1 9VBS MET A 10 ? UNP Q9U389 LEU 282 'engineered mutation' 282 3 2 9VBS GLY B 1 ? UNP Q9U389 ? ? 'expression tag' 273 4 2 9VBS PRO B 2 ? UNP Q9U389 ? ? 'expression tag' 274 5 2 9VBS MET B 10 ? UNP Q9U389 LEU 282 'engineered mutation' 282 6 3 9VBS GLY C 1 ? UNP Q9U389 ? ? 'expression tag' 273 7 3 9VBS PRO C 2 ? UNP Q9U389 ? ? 'expression tag' 274 8 3 9VBS MET C 10 ? UNP Q9U389 LEU 282 'engineered mutation' 282 9 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3360 ? 1 MORE -28 ? 1 'SSA (A^2)' 10690 ? 2 'ABSA (A^2)' 3350 ? 2 MORE -32 ? 2 'SSA (A^2)' 10670 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,D,E 2 1,2 C # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 3_754 -x+2,y,-z-1/2 -1.0000000000 0.0000000000 0.0000000000 184.6000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 -35.7000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 39 ? GLY A 109 ? THR A 311 GLY A 381 1 ? 71 HELX_P HELX_P2 AA2 THR B 39 ? CYS B 105 ? THR B 311 CYS B 377 1 ? 67 HELX_P HELX_P3 AA3 THR C 39 ? CYS C 105 ? THR C 311 CYS C 377 1 ? 67 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 105 SG ? ? ? 1_555 B CYS 105 SG ? ? A CYS 377 B CYS 377 1_555 ? ? ? ? ? ? ? 2.024 ? ? disulf2 disulf ? ? C CYS 105 SG ? ? ? 1_555 C CYS 105 SG ? ? C CYS 377 C CYS 377 3_754 ? ? ? ? ? ? ? 2.033 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS A 105 ? CYS B 105 ? CYS A 377 ? 1_555 CYS B 377 ? 1_555 SG SG . . . None 'Disulfide bridge' 2 CYS C 105 ? CYS C 105 ? CYS C 377 ? 1_555 CYS C 377 ? 3_754 SG SG . . . None 'Disulfide bridge' # _pdbx_entry_details.entry_id 9VBS _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ALA _pdbx_validate_torsion.auth_asym_id B _pdbx_validate_torsion.auth_seq_id 308 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -172.49 _pdbx_validate_torsion.psi -27.00 # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 72.6811 188.9779 7.2276 0.5510 ? 0.0268 ? 0.0461 ? 0.5913 ? -0.0224 ? 0.6159 ? 3.4279 ? 3.4718 ? 0.7928 ? 3.7747 ? 0.6585 ? 0.7517 ? 0.2352 ? -0.1767 ? -0.0766 ? 0.1681 ? -0.3067 ? -0.2244 ? -0.0452 ? 0.0133 ? -0.0155 ? 2 'X-RAY DIFFRACTION' ? refined 33.4041 156.3279 3.2098 1.1033 ? -0.1181 ? -0.0290 ? 0.8684 ? 0.0449 ? 1.2350 ? 0.4778 ? -0.2415 ? 0.0282 ? 0.1383 ? -0.0391 ? 0.0398 ? 0.8947 ? 0.6419 ? 0.0245 ? -0.3250 ? -0.4183 ? 0.2963 ? -0.7473 ? -1.2309 ? 0.1687 ? 3 'X-RAY DIFFRACTION' ? refined 72.2522 187.4997 4.7070 0.6025 ? -0.0473 ? 0.0787 ? 0.6472 ? -0.0058 ? 0.6137 ? 3.7587 ? 3.5579 ? -0.4034 ? 3.3085 ? -0.6760 ? -0.0126 ? -0.2513 ? -0.0362 ? 0.2516 ? -0.4494 ? 0.1281 ? 0.1703 ? -0.0547 ? -0.0274 ? 0.0155 ? 4 'X-RAY DIFFRACTION' ? refined 92.7469 232.0334 -15.9232 0.6963 ? -0.0121 ? 0.1467 ? 0.6062 ? 0.0230 ? 0.7973 ? -0.2423 ? -0.5616 ? 0.3908 ? 3.4716 ? -0.2771 ? 0.1578 ? -0.0848 ? 0.0324 ? -0.0166 ? 1.2442 ? 0.0130 ? -0.1344 ? 0.0845 ? -0.0003 ? -0.0605 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 310 through 382 ) ; 2 'X-RAY DIFFRACTION' 2 ? ? ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 307 through 311 ) ; 3 'X-RAY DIFFRACTION' 3 ? ? ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 312 through 378 ) ; 4 'X-RAY DIFFRACTION' 4 ? ? ? ? ? ? ? ? ? ? ? ;chain 'C' and (resid 308 through 378 ) ; # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 273 ? A GLY 1 2 1 Y 1 A PRO 274 ? A PRO 2 3 1 Y 1 A GLU 275 ? A GLU 3 4 1 Y 1 A GLU 276 ? A GLU 4 5 1 Y 1 A SER 277 ? A SER 5 6 1 Y 1 A GLU 278 ? A GLU 6 7 1 Y 1 A ARG 279 ? A ARG 7 8 1 Y 1 A ARG 280 ? A ARG 8 9 1 Y 1 A LYS 281 ? A LYS 9 10 1 Y 1 A MET 282 ? A MET 10 11 1 Y 1 A ALA 283 ? A ALA 11 12 1 Y 1 A GLU 284 ? A GLU 12 13 1 Y 1 A ASP 285 ? A ASP 13 14 1 Y 1 A GLN 286 ? A GLN 14 15 1 Y 1 A LEU 287 ? A LEU 15 16 1 Y 1 A LYS 288 ? A LYS 16 17 1 Y 1 A HIS 289 ? A HIS 17 18 1 Y 1 A ALA 290 ? A ALA 18 19 1 Y 1 A ARG 291 ? A ARG 19 20 1 Y 1 A GLY 292 ? A GLY 20 21 1 Y 1 A GLY 293 ? A GLY 21 22 1 Y 1 A SER 294 ? A SER 22 23 1 Y 1 A VAL 295 ? A VAL 23 24 1 Y 1 A PHE 296 ? A PHE 24 25 1 Y 1 A ASP 297 ? A ASP 25 26 1 Y 1 A PRO 298 ? A PRO 26 27 1 Y 1 A PRO 299 ? A PRO 27 28 1 Y 1 A ALA 300 ? A ALA 28 29 1 Y 1 A SER 301 ? A SER 29 30 1 Y 1 A PHE 302 ? A PHE 30 31 1 Y 1 A VAL 303 ? A VAL 31 32 1 Y 1 A ALA 304 ? A ALA 32 33 1 Y 1 A SER 305 ? A SER 33 34 1 Y 1 A GLN 306 ? A GLN 34 35 1 Y 1 A LEU 307 ? A LEU 35 36 1 Y 1 A ALA 308 ? A ALA 36 37 1 Y 1 A GLU 309 ? A GLU 37 38 1 Y 1 A LEU 383 ? A LEU 111 39 1 Y 1 A GLU 384 ? A GLU 112 40 1 Y 1 A ASP 385 ? A ASP 113 41 1 Y 1 A PHE 386 ? A PHE 114 42 1 Y 1 A SER 387 ? A SER 115 43 1 Y 1 A SER 388 ? A SER 116 44 1 Y 1 B GLY 273 ? B GLY 1 45 1 Y 1 B PRO 274 ? B PRO 2 46 1 Y 1 B GLU 275 ? B GLU 3 47 1 Y 1 B GLU 276 ? B GLU 4 48 1 Y 1 B SER 277 ? B SER 5 49 1 Y 1 B GLU 278 ? B GLU 6 50 1 Y 1 B ARG 279 ? B ARG 7 51 1 Y 1 B ARG 280 ? B ARG 8 52 1 Y 1 B LYS 281 ? B LYS 9 53 1 Y 1 B MET 282 ? B MET 10 54 1 Y 1 B ALA 283 ? B ALA 11 55 1 Y 1 B GLU 284 ? B GLU 12 56 1 Y 1 B ASP 285 ? B ASP 13 57 1 Y 1 B GLN 286 ? B GLN 14 58 1 Y 1 B LEU 287 ? B LEU 15 59 1 Y 1 B LYS 288 ? B LYS 16 60 1 Y 1 B HIS 289 ? B HIS 17 61 1 Y 1 B ALA 290 ? B ALA 18 62 1 Y 1 B ARG 291 ? B ARG 19 63 1 Y 1 B GLY 292 ? B GLY 20 64 1 Y 1 B GLY 293 ? B GLY 21 65 1 Y 1 B SER 294 ? B SER 22 66 1 Y 1 B VAL 295 ? B VAL 23 67 1 Y 1 B PHE 296 ? B PHE 24 68 1 Y 1 B ASP 297 ? B ASP 25 69 1 Y 1 B PRO 298 ? B PRO 26 70 1 Y 1 B PRO 299 ? B PRO 27 71 1 Y 1 B ALA 300 ? B ALA 28 72 1 Y 1 B SER 301 ? B SER 29 73 1 Y 1 B PHE 302 ? B PHE 30 74 1 Y 1 B VAL 303 ? B VAL 31 75 1 Y 1 B ALA 304 ? B ALA 32 76 1 Y 1 B SER 305 ? B SER 33 77 1 Y 1 B GLN 306 ? B GLN 34 78 1 Y 1 B GLN 379 ? B GLN 107 79 1 Y 1 B LEU 380 ? B LEU 108 80 1 Y 1 B GLY 381 ? B GLY 109 81 1 Y 1 B VAL 382 ? B VAL 110 82 1 Y 1 B LEU 383 ? B LEU 111 83 1 Y 1 B GLU 384 ? B GLU 112 84 1 Y 1 B ASP 385 ? B ASP 113 85 1 Y 1 B PHE 386 ? B PHE 114 86 1 Y 1 B SER 387 ? B SER 115 87 1 Y 1 B SER 388 ? B SER 116 88 1 Y 1 C GLY 273 ? C GLY 1 89 1 Y 1 C PRO 274 ? C PRO 2 90 1 Y 1 C GLU 275 ? C GLU 3 91 1 Y 1 C GLU 276 ? C GLU 4 92 1 Y 1 C SER 277 ? C SER 5 93 1 Y 1 C GLU 278 ? C GLU 6 94 1 Y 1 C ARG 279 ? C ARG 7 95 1 Y 1 C ARG 280 ? C ARG 8 96 1 Y 1 C LYS 281 ? C LYS 9 97 1 Y 1 C MET 282 ? C MET 10 98 1 Y 1 C ALA 283 ? C ALA 11 99 1 Y 1 C GLU 284 ? C GLU 12 100 1 Y 1 C ASP 285 ? C ASP 13 101 1 Y 1 C GLN 286 ? C GLN 14 102 1 Y 1 C LEU 287 ? C LEU 15 103 1 Y 1 C LYS 288 ? C LYS 16 104 1 Y 1 C HIS 289 ? C HIS 17 105 1 Y 1 C ALA 290 ? C ALA 18 106 1 Y 1 C ARG 291 ? C ARG 19 107 1 Y 1 C GLY 292 ? C GLY 20 108 1 Y 1 C GLY 293 ? C GLY 21 109 1 Y 1 C SER 294 ? C SER 22 110 1 Y 1 C VAL 295 ? C VAL 23 111 1 Y 1 C PHE 296 ? C PHE 24 112 1 Y 1 C ASP 297 ? C ASP 25 113 1 Y 1 C PRO 298 ? C PRO 26 114 1 Y 1 C PRO 299 ? C PRO 27 115 1 Y 1 C ALA 300 ? C ALA 28 116 1 Y 1 C SER 301 ? C SER 29 117 1 Y 1 C PHE 302 ? C PHE 30 118 1 Y 1 C VAL 303 ? C VAL 31 119 1 Y 1 C ALA 304 ? C ALA 32 120 1 Y 1 C SER 305 ? C SER 33 121 1 Y 1 C GLN 306 ? C GLN 34 122 1 Y 1 C LEU 307 ? C LEU 35 123 1 Y 1 C GLN 379 ? C GLN 107 124 1 Y 1 C LEU 380 ? C LEU 108 125 1 Y 1 C GLY 381 ? C GLY 109 126 1 Y 1 C VAL 382 ? C VAL 110 127 1 Y 1 C LEU 383 ? C LEU 111 128 1 Y 1 C GLU 384 ? C GLU 112 129 1 Y 1 C ASP 385 ? C ASP 113 130 1 Y 1 C PHE 386 ? C PHE 114 131 1 Y 1 C SER 387 ? C SER 115 132 1 Y 1 C SER 388 ? C SER 116 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TYR N N N N 321 TYR CA C N S 322 TYR C C N N 323 TYR O O N N 324 TYR CB C N N 325 TYR CG C Y N 326 TYR CD1 C Y N 327 TYR CD2 C Y N 328 TYR CE1 C Y N 329 TYR CE2 C Y N 330 TYR CZ C Y N 331 TYR OH O N N 332 TYR OXT O N N 333 TYR H H N N 334 TYR H2 H N N 335 TYR HA H N N 336 TYR HB2 H N N 337 TYR HB3 H N N 338 TYR HD1 H N N 339 TYR HD2 H N N 340 TYR HE1 H N N 341 TYR HE2 H N N 342 TYR HH H N N 343 TYR HXT H N N 344 VAL N N N N 345 VAL CA C N S 346 VAL C C N N 347 VAL O O N N 348 VAL CB C N N 349 VAL CG1 C N N 350 VAL CG2 C N N 351 VAL OXT O N N 352 VAL H H N N 353 VAL H2 H N N 354 VAL HA H N N 355 VAL HB H N N 356 VAL HG11 H N N 357 VAL HG12 H N N 358 VAL HG13 H N N 359 VAL HG21 H N N 360 VAL HG22 H N N 361 VAL HG23 H N N 362 VAL HXT H N N 363 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TYR N CA sing N N 306 TYR N H sing N N 307 TYR N H2 sing N N 308 TYR CA C sing N N 309 TYR CA CB sing N N 310 TYR CA HA sing N N 311 TYR C O doub N N 312 TYR C OXT sing N N 313 TYR CB CG sing N N 314 TYR CB HB2 sing N N 315 TYR CB HB3 sing N N 316 TYR CG CD1 doub Y N 317 TYR CG CD2 sing Y N 318 TYR CD1 CE1 sing Y N 319 TYR CD1 HD1 sing N N 320 TYR CD2 CE2 doub Y N 321 TYR CD2 HD2 sing N N 322 TYR CE1 CZ doub Y N 323 TYR CE1 HE1 sing N N 324 TYR CE2 CZ sing Y N 325 TYR CE2 HE2 sing N N 326 TYR CZ OH sing N N 327 TYR OH HH sing N N 328 TYR OXT HXT sing N N 329 VAL N CA sing N N 330 VAL N H sing N N 331 VAL N H2 sing N N 332 VAL CA C sing N N 333 VAL CA CB sing N N 334 VAL CA HA sing N N 335 VAL C O doub N N 336 VAL C OXT sing N N 337 VAL CB CG1 sing N N 338 VAL CB CG2 sing N N 339 VAL CB HB sing N N 340 VAL CG1 HG11 sing N N 341 VAL CG1 HG12 sing N N 342 VAL CG1 HG13 sing N N 343 VAL CG2 HG21 sing N N 344 VAL CG2 HG22 sing N N 345 VAL CG2 HG23 sing N N 346 VAL OXT HXT sing N N 347 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Japan Society for the Promotion of Science (JSPS)' Japan 19H05707 1 'Japan Science and Technology' Japan JPMJCR20E3 2 # _atom_sites.entry_id 9VBS _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.010834 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.004179 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014006 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ # loop_ #