HEADER RNA BINDING PROTEIN 04-SEP-25 9WNE TITLE CRYO-EM STRUCTURE OF THE LBCAS12A-LID2-CRRNA-DNA COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: CPF1; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: CRRNA; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: DNA (39-MER); COMPND 11 CHAIN: C; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 4; COMPND 14 MOLECULE: DNA (39-MER); COMPND 15 CHAIN: D; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LACHNOSPIRACEAE BACTERIUM ND2006; SOURCE 3 ORGANISM_TAXID: 1410628; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 MOL_ID: 2; SOURCE 7 SYNTHETIC: YES; SOURCE 8 ORGANISM_SCIENTIFIC: LACHNOSPIRACEAE BACTERIUM ND2006; SOURCE 9 ORGANISM_TAXID: 1410628; SOURCE 10 MOL_ID: 3; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: LACHNOSPIRACEAE BACTERIUM ND2006; SOURCE 13 ORGANISM_TAXID: 1410628; SOURCE 14 MOL_ID: 4; SOURCE 15 SYNTHETIC: YES; SOURCE 16 ORGANISM_SCIENTIFIC: LACHNOSPIRACEAE BACTERIUM ND2006; SOURCE 17 ORGANISM_TAXID: 1410628 KEYWDS CRISPR-CAS, RNA BINDING PROTEIN-DNA COMPLEX, RNA BINDING PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR S.N.OMURA,R.WARREN VILLEGAS,J.VAN DER OOST,O.NUREKI REVDAT 1 14-OCT-26 9WNE 0 JRNL AUTH R.WARREN VILLEGAS,S.N.OMURA,D.R.CASTRO,C.SUDFELD,M.LUTEIJN, JRNL AUTH 2 H.MORINAGA,W.J.INOUE,Y.SHUTO,D.D.VLEESSCHAUWER,R.H.J.STAALS, JRNL AUTH 3 O.NUREKI,W.Y.WU,J.VAN DER OOST JRNL TITL ENGINEERING AND CHARACTERIZATION OF A NOVEL CAS12A NICKASE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.54 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CRYOSPARC, SERVALCAT, CRYOSPARC REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.540 REMARK 3 NUMBER OF PARTICLES : 100683 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9WNE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 05-SEP-25. REMARK 100 THE DEPOSITION ID IS D_1300063397. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : LBCAS12A-LID2.3-CRRNA-TARGET REMARK 245 DNA; CRRNA-TARGET DNA; LBCAS12A- REMARK 245 LID2.3 REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.60 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 BIOQUANTUM (6K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 800.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 1600.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5500.00 REMARK 245 ILLUMINATION MODE : OTHER REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -17 REMARK 465 GLY A -16 REMARK 465 SER A -15 REMARK 465 SER A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 GLU A -7 REMARK 465 ASN A -6 REMARK 465 LEU A -5 REMARK 465 TYR A -4 REMARK 465 PHE A -3 REMARK 465 GLN A -2 REMARK 465 SER A -1 REMARK 465 LYS A 1219 REMARK 465 G B -22 REMARK 465 G B -21 REMARK 465 DG C -9 REMARK 465 DG C -8 REMARK 465 DT C -7 REMARK 465 DG C -6 REMARK 465 DA C -5 REMARK 465 DC C -4 REMARK 465 DT C -3 REMARK 465 DA C -2 REMARK 465 DC C -1 REMARK 465 DA D 4 REMARK 465 DT D 5 REMARK 465 DG D 6 REMARK 465 DC D 7 REMARK 465 DT D 8 REMARK 465 DA D 17 REMARK 465 DG D 18 REMARK 465 DC D 19 REMARK 465 DC D 20 REMARK 465 DG D 21 REMARK 465 DT D 22 REMARK 465 DA D 23 REMARK 465 DG D 24 REMARK 465 DT D 25 REMARK 465 DC D 26 REMARK 465 DA D 27 REMARK 465 DC D 28 REMARK 465 DC D 29 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LEU A 856 OH TYR A 903 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 543 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 U B -14 O3' - P - OP2 ANGL. DEV. = 8.1 DEGREES REMARK 500 U B -14 O5' - P - OP2 ANGL. DEV. = -7.2 DEGREES REMARK 500 A B -4 O5' - P - OP2 ANGL. DEV. = -6.5 DEGREES REMARK 500 G B -3 O5' - P - OP2 ANGL. DEV. = -8.6 DEGREES REMARK 500 A B -2 O5' - P - OP2 ANGL. DEV. = -8.6 DEGREES REMARK 500 U B 1 O3' - P - O5' ANGL. DEV. = -23.4 DEGREES REMARK 500 U B 1 O5' - P - OP1 ANGL. DEV. = 7.7 DEGREES REMARK 500 A B 11 O5' - P - OP2 ANGL. DEV. = -6.1 DEGREES REMARK 500 G B 12 O5' - P - OP2 ANGL. DEV. = -6.5 DEGREES REMARK 500 U B 16 O5' - P - OP2 ANGL. DEV. = -6.0 DEGREES REMARK 500 DC C 6 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 DC C 14 O4' - C1' - N1 ANGL. DEV. = 2.5 DEGREES REMARK 500 DA C 15 O3' - P - O5' ANGL. DEV. = -13.4 DEGREES REMARK 500 DA C 19 O5' - P - OP2 ANGL. DEV. = -6.9 DEGREES REMARK 500 DG C 20 O5' - P - OP2 ANGL. DEV. = -6.7 DEGREES REMARK 500 DG C 20 O4' - C1' - N9 ANGL. DEV. = 2.1 DEGREES REMARK 500 DG C 26 O4' - C1' - N9 ANGL. DEV. = 2.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 126 -58.88 -123.10 REMARK 500 GLU A 178 -70.21 -114.29 REMARK 500 ASP A 283 45.34 -142.90 REMARK 500 ASN A 327 54.52 -97.28 REMARK 500 VAL A 357 -58.03 -136.47 REMARK 500 LYS A 380 -64.11 67.04 REMARK 500 PHE A 486 -62.88 -97.94 REMARK 500 PHE A 525 56.70 32.66 REMARK 500 LYS A 564 44.51 -106.81 REMARK 500 HIS A 714 16.05 -147.68 REMARK 500 HIS A 733 51.93 -112.10 REMARK 500 GLU A 835 -49.02 -140.41 REMARK 500 LEU A 856 58.91 -111.41 REMARK 500 THR A1011 -55.87 -137.20 REMARK 500 ARG A1025 115.99 -161.08 REMARK 500 GLU A1032 -14.69 75.18 REMARK 500 LYS A1053 -51.53 74.38 REMARK 500 LYS A1071 -52.49 -124.94 REMARK 500 ASN A1097 98.20 -69.05 REMARK 500 LEU A1127 35.47 -97.26 REMARK 500 ASP A1140 77.27 -155.20 REMARK 500 ASN A1164 70.95 -108.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 174 0.08 SIDE CHAIN REMARK 500 ARG A 182 0.07 SIDE CHAIN REMARK 500 ARG A 543 0.11 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 101 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 716 O REMARK 620 2 HOH A1409 O 73.4 REMARK 620 3 A B -4 OP2 86.0 100.5 REMARK 620 4 HOH A1413 O 76.1 141.6 100.1 REMARK 620 5 HOH A1414 O 77.2 75.6 163.2 75.3 REMARK 620 6 HOH B 204 O 144.0 95.6 130.0 95.5 66.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 832 OD2 REMARK 620 2 ASP A1172 OD1 86.5 REMARK 620 3 HOH A1404 O 89.4 91.7 REMARK 620 4 HOH A1415 O 86.6 90.4 175.3 REMARK 620 5 DG D 14 OP1 98.8 174.7 87.6 90.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 832 OD1 REMARK 620 2 ARG A 833 O 86.4 REMARK 620 3 GLU A 925 OE1 114.1 148.9 REMARK 620 4 GLU A 925 OE2 90.2 112.7 48.1 REMARK 620 5 HOH A1403 O 66.0 143.6 67.3 91.6 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-66115 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF THE LBCAS12A-LID2-CRRNA-DNA COMPLEX DBREF1 9WNE A 1 1219 UNP A0A182DWE3_9FIRM DBREF2 9WNE A A0A182DWE3 2 1228 DBREF 9WNE B -22 19 PDB 9WNE 9WNE -22 19 DBREF 9WNE C -9 29 PDB 9WNE 9WNE -9 29 DBREF 9WNE D -9 29 PDB 9WNE 9WNE -9 29 SEQADV 9WNE MET A -17 UNP A0A182DWE INITIATING METHIONINE SEQADV 9WNE GLY A -16 UNP A0A182DWE EXPRESSION TAG SEQADV 9WNE SER A -15 UNP A0A182DWE EXPRESSION TAG SEQADV 9WNE SER A -14 UNP A0A182DWE EXPRESSION TAG SEQADV 9WNE HIS A -13 UNP A0A182DWE EXPRESSION TAG SEQADV 9WNE HIS A -12 UNP A0A182DWE EXPRESSION TAG SEQADV 9WNE HIS A -11 UNP A0A182DWE EXPRESSION TAG SEQADV 9WNE HIS A -10 UNP A0A182DWE EXPRESSION TAG SEQADV 9WNE HIS A -9 UNP A0A182DWE EXPRESSION TAG SEQADV 9WNE HIS A -8 UNP A0A182DWE EXPRESSION TAG SEQADV 9WNE GLU A -7 UNP A0A182DWE EXPRESSION TAG SEQADV 9WNE ASN A -6 UNP A0A182DWE EXPRESSION TAG SEQADV 9WNE LEU A -5 UNP A0A182DWE EXPRESSION TAG SEQADV 9WNE TYR A -4 UNP A0A182DWE EXPRESSION TAG SEQADV 9WNE PHE A -3 UNP A0A182DWE EXPRESSION TAG SEQADV 9WNE GLN A -2 UNP A0A182DWE EXPRESSION TAG SEQADV 9WNE SER A -1 UNP A0A182DWE EXPRESSION TAG SEQADV 9WNE ASN A 0 UNP A0A182DWE EXPRESSION TAG SEQADV 9WNE ASN A 112 UNP A0A182DWE ALA 113 CONFLICT SEQADV 9WNE GLU A 113 UNP A0A182DWE ALA 114 CONFLICT SEQADV 9WNE PHE A 131 UNP A0A182DWE ALA 132 CONFLICT SEQADV 9WNE LEU A 132 UNP A0A182DWE ALA 133 CONFLICT SEQADV 9WNE GLN A 264 UNP A0A182DWE ALA 265 CONFLICT SEQADV 9WNE LYS A 269 UNP A0A182DWE ALA 270 CONFLICT SEQADV 9WNE VAL A 357 UNP A0A182DWE LEU 358 CONFLICT SEQADV 9WNE A UNP A0A182DWE GLY 931 DELETION SEQADV 9WNE A UNP A0A182DWE PHE 932 DELETION SEQADV 9WNE A UNP A0A182DWE LYS 933 DELETION SEQADV 9WNE A UNP A0A182DWE ASN 934 DELETION SEQADV 9WNE A UNP A0A182DWE SER 935 DELETION SEQADV 9WNE A UNP A0A182DWE ARG 936 DELETION SEQADV 9WNE A UNP A0A182DWE VAL 937 DELETION SEQADV 9WNE A UNP A0A182DWE LYS 938 DELETION SEQADV 9WNE TYR A 930 UNP A0A182DWE VAL 939 CONFLICT SEQADV 9WNE CYS A 931 UNP A0A182DWE GLU 940 CONFLICT SEQADV 9WNE SER A 932 UNP A0A182DWE LYS 941 CONFLICT SEQADV 9WNE SER A 933 UNP A0A182DWE GLN 942 CONFLICT SEQADV 9WNE ARG A 1068 UNP A0A182DWE ALA 1077 CONFLICT SEQADV 9WNE ASN A 1069 UNP A0A182DWE ALA 1078 CONFLICT SEQADV 9WNE PRO A 1070 UNP A0A182DWE ALA 1079 CONFLICT SEQADV 9WNE ASP A 1077 UNP A0A182DWE ALA 1086 CONFLICT SEQRES 1 A 1237 MET GLY SER SER HIS HIS HIS HIS HIS HIS GLU ASN LEU SEQRES 2 A 1237 TYR PHE GLN SER ASN ALA SER LYS LEU GLU LYS PHE THR SEQRES 3 A 1237 ASN CYS TYR SER LEU SER LYS THR LEU ARG PHE LYS ALA SEQRES 4 A 1237 ILE PRO VAL GLY LYS THR GLN GLU ASN ILE ASP ASN LYS SEQRES 5 A 1237 ARG LEU LEU VAL GLU ASP GLU LYS ARG ALA GLU ASP TYR SEQRES 6 A 1237 LYS GLY VAL LYS LYS LEU LEU ASP ARG TYR TYR LEU SER SEQRES 7 A 1237 PHE ILE ASN ASP VAL LEU HIS SER ILE LYS LEU LYS ASN SEQRES 8 A 1237 LEU ASN ASN TYR ILE SER LEU PHE ARG LYS LYS THR ARG SEQRES 9 A 1237 THR GLU LYS GLU ASN LYS GLU LEU GLU ASN LEU GLU ILE SEQRES 10 A 1237 ASN LEU ARG LYS GLU ILE ALA LYS ALA PHE LYS GLY ASN SEQRES 11 A 1237 GLU GLY TYR LYS SER LEU PHE LYS LYS ASP ILE ILE GLU SEQRES 12 A 1237 THR ILE LEU PRO GLU PHE LEU ASP ASP LYS ASP GLU ILE SEQRES 13 A 1237 ALA LEU VAL ASN SER PHE ASN GLY PHE THR THR ALA PHE SEQRES 14 A 1237 THR GLY PHE PHE ASP ASN ARG GLU ASN MET PHE SER GLU SEQRES 15 A 1237 GLU ALA LYS SER THR SER ILE ALA PHE ARG CYS ILE ASN SEQRES 16 A 1237 GLU ASN LEU THR ARG TYR ILE SER ASN MET ASP ILE PHE SEQRES 17 A 1237 GLU LYS VAL ASP ALA ILE PHE ASP LYS HIS GLU VAL GLN SEQRES 18 A 1237 GLU ILE LYS GLU LYS ILE LEU ASN SER ASP TYR ASP VAL SEQRES 19 A 1237 GLU ASP PHE PHE GLU GLY GLU PHE PHE ASN PHE VAL LEU SEQRES 20 A 1237 THR GLN GLU GLY ILE ASP VAL TYR ASN ALA ILE ILE GLY SEQRES 21 A 1237 GLY PHE VAL THR GLU SER GLY GLU LYS ILE LYS GLY LEU SEQRES 22 A 1237 ASN GLU TYR ILE ASN LEU TYR ASN GLN LYS THR LYS GLN SEQRES 23 A 1237 LYS LEU PRO LYS PHE LYS PRO LEU TYR LYS GLN VAL LEU SEQRES 24 A 1237 SER ASP ARG GLU SER LEU SER PHE TYR GLY GLU GLY TYR SEQRES 25 A 1237 THR SER ASP GLU GLU VAL LEU GLU VAL PHE ARG ASN THR SEQRES 26 A 1237 LEU ASN LYS ASN SER GLU ILE PHE SER SER ILE LYS LYS SEQRES 27 A 1237 LEU GLU LYS LEU PHE LYS ASN PHE ASP GLU TYR SER SER SEQRES 28 A 1237 ALA GLY ILE PHE VAL LYS ASN GLY PRO ALA ILE SER THR SEQRES 29 A 1237 ILE SER LYS ASP ILE PHE GLY GLU TRP ASN VAL ILE ARG SEQRES 30 A 1237 ASP LYS TRP ASN ALA GLU TYR ASP ASP ILE HIS LEU LYS SEQRES 31 A 1237 LYS LYS ALA VAL VAL THR GLU LYS TYR GLU ASP ASP ARG SEQRES 32 A 1237 ARG LYS SER PHE LYS LYS ILE GLY SER PHE SER LEU GLU SEQRES 33 A 1237 GLN LEU GLN GLU TYR ALA ASP ALA ASP LEU SER VAL VAL SEQRES 34 A 1237 GLU LYS LEU LYS GLU ILE ILE ILE GLN LYS VAL ASP GLU SEQRES 35 A 1237 ILE TYR LYS VAL TYR GLY SER SER GLU LYS LEU PHE ASP SEQRES 36 A 1237 ALA ASP PHE VAL LEU GLU LYS SER LEU LYS LYS ASN ASP SEQRES 37 A 1237 ALA VAL VAL ALA ILE MET LYS ASP LEU LEU ASP SER VAL SEQRES 38 A 1237 LYS SER PHE GLU ASN TYR ILE LYS ALA PHE PHE GLY GLU SEQRES 39 A 1237 GLY LYS GLU THR ASN ARG ASP GLU SER PHE TYR GLY ASP SEQRES 40 A 1237 PHE VAL LEU ALA TYR ASP ILE LEU LEU LYS VAL ASP HIS SEQRES 41 A 1237 ILE TYR ASP ALA ILE ARG ASN TYR VAL THR GLN LYS PRO SEQRES 42 A 1237 TYR SER LYS ASP LYS PHE LYS LEU TYR PHE GLN ASN PRO SEQRES 43 A 1237 GLN PHE MET GLY GLY TRP ASP LYS ASP LYS GLU THR ASP SEQRES 44 A 1237 TYR ARG ALA THR ILE LEU ARG TYR GLY SER LYS TYR TYR SEQRES 45 A 1237 LEU ALA ILE MET ASP LYS LYS TYR ALA LYS CYS LEU GLN SEQRES 46 A 1237 LYS ILE ASP LYS ASP ASP VAL ASN GLY ASN TYR GLU LYS SEQRES 47 A 1237 ILE ASN TYR LYS LEU LEU PRO GLY PRO ASN LYS MET LEU SEQRES 48 A 1237 PRO LYS VAL PHE PHE SER LYS LYS TRP MET ALA TYR TYR SEQRES 49 A 1237 ASN PRO SER GLU ASP ILE GLN LYS ILE TYR LYS ASN GLY SEQRES 50 A 1237 THR PHE LYS LYS GLY ASP MET PHE ASN LEU ASN ASP CYS SEQRES 51 A 1237 HIS LYS LEU ILE ASP PHE PHE LYS ASP SER ILE SER ARG SEQRES 52 A 1237 TYR PRO LYS TRP SER ASN ALA TYR ASP PHE ASN PHE SER SEQRES 53 A 1237 GLU THR GLU LYS TYR LYS ASP ILE ALA GLY PHE TYR ARG SEQRES 54 A 1237 GLU VAL GLU GLU GLN GLY TYR LYS VAL SER PHE GLU SER SEQRES 55 A 1237 ALA SER LYS LYS GLU VAL ASP LYS LEU VAL GLU GLU GLY SEQRES 56 A 1237 LYS LEU TYR MET PHE GLN ILE TYR ASN LYS ASP PHE SER SEQRES 57 A 1237 ASP LYS SER HIS GLY THR PRO ASN LEU HIS THR MET TYR SEQRES 58 A 1237 PHE LYS LEU LEU PHE ASP GLU ASN ASN HIS GLY GLN ILE SEQRES 59 A 1237 ARG LEU SER GLY GLY ALA GLU LEU PHE MET ARG ARG ALA SEQRES 60 A 1237 SER LEU LYS LYS GLU GLU LEU VAL VAL HIS PRO ALA ASN SEQRES 61 A 1237 SER PRO ILE ALA ASN LYS ASN PRO ASP ASN PRO LYS LYS SEQRES 62 A 1237 THR THR THR LEU SER TYR ASP VAL TYR LYS ASP LYS ARG SEQRES 63 A 1237 PHE SER GLU ASP GLN TYR GLU LEU HIS ILE PRO ILE ALA SEQRES 64 A 1237 ILE ASN LYS CYS PRO LYS ASN ILE PHE LYS ILE ASN THR SEQRES 65 A 1237 GLU VAL ARG VAL LEU LEU LYS HIS ASP ASP ASN PRO TYR SEQRES 66 A 1237 VAL ILE GLY ILE ASP ARG GLY GLU ARG ASN LEU LEU TYR SEQRES 67 A 1237 ILE VAL VAL VAL ASP GLY LYS GLY ASN ILE VAL GLU GLN SEQRES 68 A 1237 TYR SER LEU ASN GLU ILE ILE ASN ASN PHE ASN GLY ILE SEQRES 69 A 1237 ARG ILE LYS THR ASP TYR HIS SER LEU LEU ASP LYS LYS SEQRES 70 A 1237 GLU LYS GLU ARG PHE GLU ALA ARG GLN ASN TRP THR SER SEQRES 71 A 1237 ILE GLU ASN ILE LYS GLU LEU LYS ALA GLY TYR ILE SER SEQRES 72 A 1237 GLN VAL VAL HIS LYS ILE CYS GLU LEU VAL GLU LYS TYR SEQRES 73 A 1237 ASP ALA VAL ILE ALA LEU GLU ASP LEU ASN SER TYR CYS SEQRES 74 A 1237 SER SER VAL TYR GLN LYS PHE GLU LYS MET LEU ILE ASP SEQRES 75 A 1237 LYS LEU ASN TYR MET VAL ASP LYS LYS SER ASN PRO CYS SEQRES 76 A 1237 ALA THR GLY GLY ALA LEU LYS GLY TYR GLN ILE THR ASN SEQRES 77 A 1237 LYS PHE GLU SER PHE LYS SER MET SER THR GLN ASN GLY SEQRES 78 A 1237 PHE ILE PHE TYR ILE PRO ALA TRP LEU THR SER LYS ILE SEQRES 79 A 1237 ASP PRO SER THR GLY PHE VAL ASN LEU LEU LYS THR LYS SEQRES 80 A 1237 TYR THR SER ILE ALA ASP SER LYS LYS PHE ILE SER SER SEQRES 81 A 1237 PHE ASP ARG ILE MET TYR VAL PRO GLU GLU ASP LEU PHE SEQRES 82 A 1237 GLU PHE ALA LEU ASP TYR LYS ASN PHE SER ARG THR ASP SEQRES 83 A 1237 ALA ASP TYR ILE LYS LYS TRP LYS LEU TYR SER TYR GLY SEQRES 84 A 1237 ASN ARG ILE ARG ILE PHE ARG ASN PRO LYS LYS ASN ASN SEQRES 85 A 1237 VAL PHE ASP TRP GLU GLU VAL CYS LEU THR SER ALA TYR SEQRES 86 A 1237 LYS GLU LEU PHE ASN LYS TYR GLY ILE ASN TYR GLN GLN SEQRES 87 A 1237 GLY ASP ILE ARG ALA LEU LEU CYS GLU GLN SER ASP LYS SEQRES 88 A 1237 ALA PHE TYR SER SER PHE MET ALA LEU MET SER LEU MET SEQRES 89 A 1237 LEU GLN MET ARG ASN SER ILE THR GLY ARG THR ASP VAL SEQRES 90 A 1237 ASP PHE LEU ILE SER PRO VAL LYS ASN SER ASP GLY ILE SEQRES 91 A 1237 PHE TYR ASP SER ARG ASN TYR GLU ALA GLN GLU ASN ALA SEQRES 92 A 1237 ILE LEU PRO LYS ASN ALA ASP ALA ASN GLY ALA TYR ASN SEQRES 93 A 1237 ILE ALA ARG LYS VAL LEU TRP ALA ILE GLY GLN PHE LYS SEQRES 94 A 1237 LYS ALA GLU ASP GLU LYS LEU ASP LYS VAL LYS ILE ALA SEQRES 95 A 1237 ILE SER ASN LYS GLU TRP LEU GLU TYR ALA GLN THR SER SEQRES 96 A 1237 VAL LYS SEQRES 1 B 42 G G A A U U U C U A C U A SEQRES 2 B 42 A G U G U A G A U C U A C SEQRES 3 B 42 A U G C U A C A G U G C U SEQRES 4 B 42 A G C SEQRES 1 C 39 DG DG DT DG DA DC DT DA DC DG DG DC DT SEQRES 2 C 39 DA DG DC DA DC DT DG DT DA DG DC DA DT SEQRES 3 C 39 DG DT DA DG DT DA DA DA DG DG DA DC DG SEQRES 1 D 39 DC DG DT DC DC DT DT DT DA DC DT DA DC SEQRES 2 D 39 DA DT DG DC DT DA DC DA DG DT DG DC DT SEQRES 3 D 39 DA DG DC DC DG DT DA DG DT DC DA DC DC HET MG A1301 1 HET MG A1302 1 HET MG B 101 1 HET MG B 102 1 HETNAM MG MAGNESIUM ION FORMUL 5 MG 4(MG 2+) FORMUL 9 HOH *19(H2 O) HELIX 1 AA1 LYS A 26 LYS A 34 1 9 HELIX 2 AA2 ARG A 35 ILE A 69 1 35 HELIX 3 AA3 ASN A 73 ARG A 82 1 10 HELIX 4 AA4 THR A 87 GLY A 111 1 25 HELIX 5 AA5 TYR A 115 LYS A 120 5 6 HELIX 6 AA6 LYS A 121 THR A 126 1 6 HELIX 7 AA7 THR A 126 LEU A 132 1 7 HELIX 8 AA8 ASP A 134 SER A 143 1 10 HELIX 9 AA9 PHE A 147 ALA A 150 5 4 HELIX 10 AB1 PHE A 151 ASN A 160 1 10 HELIX 11 AB2 MET A 161 SER A 163 5 3 HELIX 12 AB3 SER A 170 GLU A 178 1 9 HELIX 13 AB4 GLU A 178 VAL A 193 1 16 HELIX 14 AB5 ASP A 194 PHE A 197 5 4 HELIX 15 AB6 ASP A 198 ILE A 209 1 12 HELIX 16 AB7 GLU A 217 LEU A 229 5 13 HELIX 17 AB8 THR A 230 GLY A 243 1 14 HELIX 18 AB9 GLY A 254 THR A 266 1 13 HELIX 19 AC1 SER A 296 ASN A 309 1 14 HELIX 20 AC2 SER A 312 ASN A 327 1 16 HELIX 21 AC3 GLY A 341 PHE A 352 1 12 HELIX 22 AC4 VAL A 357 HIS A 370 1 14 HELIX 23 AC5 LYS A 380 ILE A 392 1 13 HELIX 24 AC6 LEU A 397 ALA A 404 1 8 HELIX 25 AC7 SER A 409 SER A 432 1 24 HELIX 26 AC8 SER A 432 ASP A 437 1 6 HELIX 27 AC9 ASN A 449 LYS A 471 1 23 HELIX 28 AD1 ALA A 472 GLY A 475 5 4 HELIX 29 AD2 ASP A 483 GLY A 488 1 6 HELIX 30 AD3 GLY A 488 LEU A 498 1 11 HELIX 31 AD4 LYS A 499 THR A 512 1 14 HELIX 32 AD5 ASP A 535 ASP A 537 5 3 HELIX 33 AD6 LYS A 538 ARG A 543 1 6 HELIX 34 AD7 LYS A 560 ALA A 563 5 4 HELIX 35 AD8 GLY A 588 PHE A 598 1 11 HELIX 36 AD9 SER A 599 TYR A 606 1 8 HELIX 37 AE1 SER A 609 GLY A 619 1 11 HELIX 38 AE2 ASN A 628 ARG A 645 1 18 HELIX 39 AE3 TYR A 646 ASN A 651 1 6 HELIX 40 AE4 GLU A 659 TYR A 663 5 5 HELIX 41 AE5 ASP A 665 GLY A 677 1 13 HELIX 42 AE6 LYS A 687 GLU A 696 1 10 HELIX 43 AE7 ASN A 706 SER A 710 5 5 HELIX 44 AE8 ASN A 718 LEU A 727 1 10 HELIX 45 AE9 LYS A 752 LEU A 756 5 5 HELIX 46 AF1 ASP A 786 GLU A 791 5 6 HELIX 47 AF2 LYS A 811 HIS A 822 1 12 HELIX 48 AF3 TYR A 872 ASN A 889 1 18 HELIX 49 AF4 ILE A 896 ASP A 919 1 24 HELIX 50 AF5 SER A 932 TYR A 948 1 17 HELIX 51 AF6 SER A 1012 SER A 1022 1 11 HELIX 52 AF7 LYS A 1042 PHE A 1044 5 3 HELIX 53 AF8 LEU A 1083 TYR A 1094 1 12 HELIX 54 AF9 ILE A 1103 GLN A 1110 1 8 HELIX 55 AG1 ASP A 1112 LEU A 1127 1 16 HELIX 56 AG2 SER A 1156 ALA A 1161 1 6 HELIX 57 AG3 ASP A 1172 LYS A 1191 1 20 HELIX 58 AG4 LYS A 1192 ALA A 1193 5 2 HELIX 59 AG5 GLU A 1194 VAL A 1201 5 8 HELIX 60 AG6 SER A 1206 SER A 1217 1 12 SHEET 1 AA1 9 PHE A 521 LYS A 522 0 SHEET 2 AA1 9 GLU A 743 ARG A 747 -1 O MET A 746 N PHE A 521 SHEET 3 AA1 9 GLN A 793 ILE A 802 -1 O GLU A 795 N PHE A 745 SHEET 4 AA1 9 LEU A 13 PRO A 23 -1 N PHE A 19 O LEU A 796 SHEET 5 AA1 9 LEU A 699 TYR A 705 -1 O TYR A 705 N LYS A 20 SHEET 6 AA1 9 LYS A 552 MET A 558 -1 N ILE A 557 O TYR A 700 SHEET 7 AA1 9 ALA A 544 TYR A 549 -1 N TYR A 549 O LYS A 552 SHEET 8 AA1 9 ASN A 577 LEU A 585 -1 O GLU A 579 N ARG A 548 SHEET 9 AA1 9 TYR A 678 SER A 686 -1 O GLU A 683 N LYS A 580 SHEET 1 AA2 4 PHE A 521 LYS A 522 0 SHEET 2 AA2 4 GLU A 743 ARG A 747 -1 O MET A 746 N PHE A 521 SHEET 3 AA2 4 GLN A 793 ILE A 802 -1 O GLU A 795 N PHE A 745 SHEET 4 AA2 4 ILE A 736 LEU A 738 -1 N ARG A 737 O ALA A 801 SHEET 1 AA3 2 PHE A 244 VAL A 245 0 SHEET 2 AA3 2 LYS A 251 ILE A 252 -1 O ILE A 252 N PHE A 244 SHEET 1 AA4 2 PHE A 337 LYS A 339 0 SHEET 2 AA4 2 SER A 394 SER A 396 -1 O PHE A 395 N VAL A 338 SHEET 1 AA5 2 VAL A 758 HIS A 759 0 SHEET 2 AA5 2 VAL A 783 TYR A 784 -1 O VAL A 783 N HIS A 759 SHEET 1 AA6 2 ILE A 765 ALA A 766 0 SHEET 2 AA6 2 THR A 776 THR A 777 -1 O THR A 777 N ILE A 765 SHEET 1 AA7 6 ILE A 850 SER A 855 0 SHEET 2 AA7 6 TYR A 840 VAL A 844 -1 N VAL A 843 O VAL A 851 SHEET 3 AA7 6 TYR A 827 ASP A 832 -1 N GLY A 830 O VAL A 842 SHEET 4 AA7 6 ALA A 920 GLU A 925 1 O ALA A 923 N ILE A 829 SHEET 5 AA7 6 ILE A 985 ILE A 988 1 O PHE A 986 N ILE A 922 SHEET 6 AA7 6 GLN A 981 ASN A 982 -1 N ASN A 982 O ILE A 985 SHEET 1 AA8 2 GLU A 858 PHE A 863 0 SHEET 2 AA8 2 ILE A 866 ASP A 871 -1 O THR A 870 N ILE A 859 SHEET 1 AA9 3 ARG A1025 VAL A1029 0 SHEET 2 AA9 3 LEU A1034 ASP A1040 -1 O ALA A1038 N ARG A1025 SHEET 3 AA9 3 LYS A1054 LEU A1057 -1 O TRP A1055 N LEU A1039 SHEET 1 AB1 2 ASN A1062 PHE A1067 0 SHEET 2 AB1 2 ASP A1077 CYS A1082 -1 O GLU A1079 N ARG A1065 SHEET 1 AB2 2 ARG A1130 SER A1132 0 SHEET 2 AB2 2 ASP A1140 LEU A1142 -1 O PHE A1141 N ASN A1131 LINK O THR A 716 MG MG B 101 1555 1555 2.47 LINK OD2 ASP A 832 MG MG A1301 1555 1555 2.52 LINK OD1 ASP A 832 MG MG A1302 1555 1555 2.41 LINK O ARG A 833 MG MG A1302 1555 1555 2.99 LINK OE1 GLU A 925 MG MG A1302 1555 1555 2.94 LINK OE2 GLU A 925 MG MG A1302 1555 1555 2.31 LINK OD1 ASP A1172 MG MG A1301 1555 1555 2.20 LINK MG MG A1301 O HOH A1404 1555 1555 2.09 LINK MG MG A1301 O HOH A1415 1555 1555 2.06 LINK MG MG A1301 OP1 DG D 14 1555 1555 2.05 LINK MG MG A1302 O HOH A1403 1555 1555 2.27 LINK O HOH A1409 MG MG B 101 1555 1555 2.09 LINK OP2 A B -4 MG MG B 101 1555 1555 1.82 LINK O HOH A1413 MG MG B 101 1555 1555 2.10 LINK O HOH A1414 MG MG B 101 1555 1555 2.09 LINK MG MG B 101 O HOH B 204 1555 1555 2.08 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 CONECT 595711964 CONECT 690611963 CONECT 690711962 CONECT 691111963 CONECT 767211963 CONECT 767311963 CONECT 969711962 CONECT1040811964 CONECT1190111962 CONECT11962 6907 96971190111969 CONECT1196211980 CONECT11963 6906 6911 7672 7673 CONECT1196311968 CONECT11964 5957104081197411978 CONECT119641197911984 CONECT1196811963 CONECT1196911962 CONECT1197411964 CONECT1197811964 CONECT1197911964 CONECT1198011962 CONECT1198411964 MASTER 292 0 4 60 36 0 0 611980 4 22 106 END