data_9WUS # _entry.id 9WUS # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.413 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9WUS pdb_00009wus 10.2210/pdb9wus/pdb WWPDB D_1300061697 ? ? EMDB EMD-66269 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2026-05-13 ? 2 'EM metadata' 1 0 2026-05-13 ? 3 'Additional map' 1 0 2026-05-13 1 4 FSC 1 0 2026-05-13 ? 5 'Half map' 1 0 2026-05-13 1 6 'Half map' 1 0 2026-05-13 2 7 Image 1 0 2026-05-13 ? 8 Mask 1 0 2026-05-13 1 9 'Primary map' 1 0 2026-05-13 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? 3 3 'Additional map' repository 'Initial release' ? ? 4 4 FSC repository 'Initial release' ? ? 5 5 'Half map' repository 'Initial release' ? ? 6 6 'Half map' repository 'Initial release' ? ? 7 7 Image repository 'Initial release' ? ? 8 8 Mask repository 'Initial release' ? ? 9 9 'Primary map' repository 'Initial release' ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9WUS _pdbx_database_status.recvd_initial_deposition_date 2025-09-18 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Cryo-EM Structure of the Periplasmic Domain of AAA Protease FtsH' _pdbx_database_related.db_id EMD-66269 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email burak.kabasakal@bristol.ac.uk _pdbx_contact_author.name_first 'Burak V.' _pdbx_contact_author.name_last Kabasakal _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-3001-9282 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Kabasakal, B.V.' 1 ? 'Goc, G.' 2 ? 'Yadav, S.' 3 ? 'Borucu, U.' 4 ? 'Berger, I.' 5 ? 'Schaffitzel, C.' 6 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Acs Chem.Biol.' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1554-8937 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 21 _citation.language ? _citation.page_first 844 _citation.page_last 851 _citation.title 'Cryo-EM Structure of the FtsH Periplasmic Domain Reveals Functional Dynamics.' _citation.year 2026 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acschembio.5c01025 _citation.pdbx_database_id_PubMed 41944809 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Goc, G.' 1 0000-0002-1963-8317 primary 'Yadav, S.K.N.' 2 ? primary 'Orriss, G.' 3 ? primary 'Borucu, U.' 4 ? primary 'Berger, I.' 5 0000-0001-7518-9045 primary 'Schaffitzel, C.' 6 0000-0002-1516-9760 primary 'Kabasakal, B.V.' 7 0000-0003-3001-9282 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'ATP-dependent zinc metalloprotease FtsH' _entity.formula_weight 7511.350 _entity.pdbx_number_of_molecules 6 _entity.pdbx_ec 3.4.24.- _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Cell division protease FtsH' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code VDYSTFLQEVNNDQVREARINGREINVTKKDSNRYTTYIPVQDPKLLDNLLTKNVKVVGEPPEEP _entity_poly.pdbx_seq_one_letter_code_can VDYSTFLQEVNNDQVREARINGREINVTKKDSNRYTTYIPVQDPKLLDNLLTKNVKVVGEPPEEP _entity_poly.pdbx_strand_id A,B,C,D,E,F _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 VAL n 1 2 ASP n 1 3 TYR n 1 4 SER n 1 5 THR n 1 6 PHE n 1 7 LEU n 1 8 GLN n 1 9 GLU n 1 10 VAL n 1 11 ASN n 1 12 ASN n 1 13 ASP n 1 14 GLN n 1 15 VAL n 1 16 ARG n 1 17 GLU n 1 18 ALA n 1 19 ARG n 1 20 ILE n 1 21 ASN n 1 22 GLY n 1 23 ARG n 1 24 GLU n 1 25 ILE n 1 26 ASN n 1 27 VAL n 1 28 THR n 1 29 LYS n 1 30 LYS n 1 31 ASP n 1 32 SER n 1 33 ASN n 1 34 ARG n 1 35 TYR n 1 36 THR n 1 37 THR n 1 38 TYR n 1 39 ILE n 1 40 PRO n 1 41 VAL n 1 42 GLN n 1 43 ASP n 1 44 PRO n 1 45 LYS n 1 46 LEU n 1 47 LEU n 1 48 ASP n 1 49 ASN n 1 50 LEU n 1 51 LEU n 1 52 THR n 1 53 LYS n 1 54 ASN n 1 55 VAL n 1 56 LYS n 1 57 VAL n 1 58 VAL n 1 59 GLY n 1 60 GLU n 1 61 PRO n 1 62 PRO n 1 63 GLU n 1 64 GLU n 1 65 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 65 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'ftsH, hflB, mrsC, std, tolZ, b3178, JW3145' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant C43 _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 VAL 1 32 32 VAL VAL A . n A 1 2 ASP 2 33 33 ASP ASP A . n A 1 3 TYR 3 34 34 TYR TYR A . n A 1 4 SER 4 35 35 SER SER A . n A 1 5 THR 5 36 36 THR THR A . n A 1 6 PHE 6 37 37 PHE PHE A . n A 1 7 LEU 7 38 38 LEU LEU A . n A 1 8 GLN 8 39 39 GLN GLN A . n A 1 9 GLU 9 40 40 GLU GLU A . n A 1 10 VAL 10 41 41 VAL VAL A . n A 1 11 ASN 11 42 42 ASN ASN A . n A 1 12 ASN 12 43 43 ASN ASN A . n A 1 13 ASP 13 44 44 ASP ASP A . n A 1 14 GLN 14 45 45 GLN GLN A . n A 1 15 VAL 15 46 46 VAL VAL A . n A 1 16 ARG 16 47 47 ARG ARG A . n A 1 17 GLU 17 48 48 GLU GLU A . n A 1 18 ALA 18 49 49 ALA ALA A . n A 1 19 ARG 19 50 50 ARG ARG A . n A 1 20 ILE 20 51 51 ILE ILE A . n A 1 21 ASN 21 52 52 ASN ASN A . n A 1 22 GLY 22 53 53 GLY GLY A . n A 1 23 ARG 23 54 54 ARG ARG A . n A 1 24 GLU 24 55 55 GLU GLU A . n A 1 25 ILE 25 56 56 ILE ILE A . n A 1 26 ASN 26 57 57 ASN ASN A . n A 1 27 VAL 27 58 58 VAL VAL A . n A 1 28 THR 28 59 59 THR THR A . n A 1 29 LYS 29 60 60 LYS LYS A . n A 1 30 LYS 30 61 61 LYS LYS A . n A 1 31 ASP 31 62 62 ASP ASP A . n A 1 32 SER 32 63 63 SER SER A . n A 1 33 ASN 33 64 64 ASN ASN A . n A 1 34 ARG 34 65 65 ARG ARG A . n A 1 35 TYR 35 66 66 TYR TYR A . n A 1 36 THR 36 67 67 THR THR A . n A 1 37 THR 37 68 68 THR THR A . n A 1 38 TYR 38 69 69 TYR TYR A . n A 1 39 ILE 39 70 70 ILE ILE A . n A 1 40 PRO 40 71 71 PRO PRO A . n A 1 41 VAL 41 72 72 VAL VAL A . n A 1 42 GLN 42 73 73 GLN GLN A . n A 1 43 ASP 43 74 74 ASP ASP A . n A 1 44 PRO 44 75 75 PRO PRO A . n A 1 45 LYS 45 76 76 LYS LYS A . n A 1 46 LEU 46 77 77 LEU LEU A . n A 1 47 LEU 47 78 78 LEU LEU A . n A 1 48 ASP 48 79 79 ASP ASP A . n A 1 49 ASN 49 80 80 ASN ASN A . n A 1 50 LEU 50 81 81 LEU LEU A . n A 1 51 LEU 51 82 82 LEU LEU A . n A 1 52 THR 52 83 83 THR THR A . n A 1 53 LYS 53 84 84 LYS LYS A . n A 1 54 ASN 54 85 85 ASN ASN A . n A 1 55 VAL 55 86 86 VAL VAL A . n A 1 56 LYS 56 87 87 LYS LYS A . n A 1 57 VAL 57 88 88 VAL VAL A . n A 1 58 VAL 58 89 89 VAL VAL A . n A 1 59 GLY 59 90 90 GLY GLY A . n A 1 60 GLU 60 91 91 GLU GLU A . n A 1 61 PRO 61 92 92 PRO PRO A . n A 1 62 PRO 62 93 93 PRO PRO A . n A 1 63 GLU 63 94 94 GLU GLU A . n A 1 64 GLU 64 95 95 GLU GLU A . n A 1 65 PRO 65 96 96 PRO PRO A . n B 1 1 VAL 1 32 32 VAL VAL B . n B 1 2 ASP 2 33 33 ASP ASP B . n B 1 3 TYR 3 34 34 TYR TYR B . n B 1 4 SER 4 35 35 SER SER B . n B 1 5 THR 5 36 36 THR THR B . n B 1 6 PHE 6 37 37 PHE PHE B . n B 1 7 LEU 7 38 38 LEU LEU B . n B 1 8 GLN 8 39 39 GLN GLN B . n B 1 9 GLU 9 40 40 GLU GLU B . n B 1 10 VAL 10 41 41 VAL VAL B . n B 1 11 ASN 11 42 42 ASN ASN B . n B 1 12 ASN 12 43 43 ASN ASN B . n B 1 13 ASP 13 44 44 ASP ASP B . n B 1 14 GLN 14 45 45 GLN GLN B . n B 1 15 VAL 15 46 46 VAL VAL B . n B 1 16 ARG 16 47 47 ARG ARG B . n B 1 17 GLU 17 48 48 GLU GLU B . n B 1 18 ALA 18 49 49 ALA ALA B . n B 1 19 ARG 19 50 50 ARG ARG B . n B 1 20 ILE 20 51 51 ILE ILE B . n B 1 21 ASN 21 52 52 ASN ASN B . n B 1 22 GLY 22 53 53 GLY GLY B . n B 1 23 ARG 23 54 54 ARG ARG B . n B 1 24 GLU 24 55 55 GLU GLU B . n B 1 25 ILE 25 56 56 ILE ILE B . n B 1 26 ASN 26 57 57 ASN ASN B . n B 1 27 VAL 27 58 58 VAL VAL B . n B 1 28 THR 28 59 59 THR THR B . n B 1 29 LYS 29 60 60 LYS LYS B . n B 1 30 LYS 30 61 61 LYS LYS B . n B 1 31 ASP 31 62 62 ASP ASP B . n B 1 32 SER 32 63 63 SER SER B . n B 1 33 ASN 33 64 64 ASN ASN B . n B 1 34 ARG 34 65 65 ARG ARG B . n B 1 35 TYR 35 66 66 TYR TYR B . n B 1 36 THR 36 67 67 THR THR B . n B 1 37 THR 37 68 68 THR THR B . n B 1 38 TYR 38 69 69 TYR TYR B . n B 1 39 ILE 39 70 70 ILE ILE B . n B 1 40 PRO 40 71 71 PRO PRO B . n B 1 41 VAL 41 72 72 VAL VAL B . n B 1 42 GLN 42 73 73 GLN GLN B . n B 1 43 ASP 43 74 74 ASP ASP B . n B 1 44 PRO 44 75 75 PRO PRO B . n B 1 45 LYS 45 76 76 LYS LYS B . n B 1 46 LEU 46 77 77 LEU LEU B . n B 1 47 LEU 47 78 78 LEU LEU B . n B 1 48 ASP 48 79 79 ASP ASP B . n B 1 49 ASN 49 80 80 ASN ASN B . n B 1 50 LEU 50 81 81 LEU LEU B . n B 1 51 LEU 51 82 82 LEU LEU B . n B 1 52 THR 52 83 83 THR THR B . n B 1 53 LYS 53 84 84 LYS LYS B . n B 1 54 ASN 54 85 85 ASN ASN B . n B 1 55 VAL 55 86 86 VAL VAL B . n B 1 56 LYS 56 87 87 LYS LYS B . n B 1 57 VAL 57 88 88 VAL VAL B . n B 1 58 VAL 58 89 89 VAL VAL B . n B 1 59 GLY 59 90 90 GLY GLY B . n B 1 60 GLU 60 91 91 GLU GLU B . n B 1 61 PRO 61 92 92 PRO PRO B . n B 1 62 PRO 62 93 93 PRO PRO B . n B 1 63 GLU 63 94 94 GLU GLU B . n B 1 64 GLU 64 95 95 GLU GLU B . n B 1 65 PRO 65 96 96 PRO PRO B . n C 1 1 VAL 1 32 32 VAL VAL C . n C 1 2 ASP 2 33 33 ASP ASP C . n C 1 3 TYR 3 34 34 TYR TYR C . n C 1 4 SER 4 35 35 SER SER C . n C 1 5 THR 5 36 36 THR THR C . n C 1 6 PHE 6 37 37 PHE PHE C . n C 1 7 LEU 7 38 38 LEU LEU C . n C 1 8 GLN 8 39 39 GLN GLN C . n C 1 9 GLU 9 40 40 GLU GLU C . n C 1 10 VAL 10 41 41 VAL VAL C . n C 1 11 ASN 11 42 42 ASN ASN C . n C 1 12 ASN 12 43 43 ASN ASN C . n C 1 13 ASP 13 44 44 ASP ASP C . n C 1 14 GLN 14 45 45 GLN GLN C . n C 1 15 VAL 15 46 46 VAL VAL C . n C 1 16 ARG 16 47 47 ARG ARG C . n C 1 17 GLU 17 48 48 GLU GLU C . n C 1 18 ALA 18 49 49 ALA ALA C . n C 1 19 ARG 19 50 50 ARG ARG C . n C 1 20 ILE 20 51 51 ILE ILE C . n C 1 21 ASN 21 52 52 ASN ASN C . n C 1 22 GLY 22 53 53 GLY GLY C . n C 1 23 ARG 23 54 54 ARG ARG C . n C 1 24 GLU 24 55 55 GLU GLU C . n C 1 25 ILE 25 56 56 ILE ILE C . n C 1 26 ASN 26 57 57 ASN ASN C . n C 1 27 VAL 27 58 58 VAL VAL C . n C 1 28 THR 28 59 59 THR THR C . n C 1 29 LYS 29 60 60 LYS LYS C . n C 1 30 LYS 30 61 61 LYS LYS C . n C 1 31 ASP 31 62 62 ASP ASP C . n C 1 32 SER 32 63 63 SER SER C . n C 1 33 ASN 33 64 64 ASN ASN C . n C 1 34 ARG 34 65 65 ARG ARG C . n C 1 35 TYR 35 66 66 TYR TYR C . n C 1 36 THR 36 67 67 THR THR C . n C 1 37 THR 37 68 68 THR THR C . n C 1 38 TYR 38 69 69 TYR TYR C . n C 1 39 ILE 39 70 70 ILE ILE C . n C 1 40 PRO 40 71 71 PRO PRO C . n C 1 41 VAL 41 72 72 VAL VAL C . n C 1 42 GLN 42 73 73 GLN GLN C . n C 1 43 ASP 43 74 74 ASP ASP C . n C 1 44 PRO 44 75 75 PRO PRO C . n C 1 45 LYS 45 76 76 LYS LYS C . n C 1 46 LEU 46 77 77 LEU LEU C . n C 1 47 LEU 47 78 78 LEU LEU C . n C 1 48 ASP 48 79 79 ASP ASP C . n C 1 49 ASN 49 80 80 ASN ASN C . n C 1 50 LEU 50 81 81 LEU LEU C . n C 1 51 LEU 51 82 82 LEU LEU C . n C 1 52 THR 52 83 83 THR THR C . n C 1 53 LYS 53 84 84 LYS LYS C . n C 1 54 ASN 54 85 85 ASN ASN C . n C 1 55 VAL 55 86 86 VAL VAL C . n C 1 56 LYS 56 87 87 LYS LYS C . n C 1 57 VAL 57 88 88 VAL VAL C . n C 1 58 VAL 58 89 89 VAL VAL C . n C 1 59 GLY 59 90 90 GLY GLY C . n C 1 60 GLU 60 91 91 GLU GLU C . n C 1 61 PRO 61 92 92 PRO PRO C . n C 1 62 PRO 62 93 93 PRO PRO C . n C 1 63 GLU 63 94 94 GLU GLU C . n C 1 64 GLU 64 95 95 GLU GLU C . n C 1 65 PRO 65 96 96 PRO PRO C . n D 1 1 VAL 1 32 32 VAL VAL D . n D 1 2 ASP 2 33 33 ASP ASP D . n D 1 3 TYR 3 34 34 TYR TYR D . n D 1 4 SER 4 35 35 SER SER D . n D 1 5 THR 5 36 36 THR THR D . n D 1 6 PHE 6 37 37 PHE PHE D . n D 1 7 LEU 7 38 38 LEU LEU D . n D 1 8 GLN 8 39 39 GLN GLN D . n D 1 9 GLU 9 40 40 GLU GLU D . n D 1 10 VAL 10 41 41 VAL VAL D . n D 1 11 ASN 11 42 42 ASN ASN D . n D 1 12 ASN 12 43 43 ASN ASN D . n D 1 13 ASP 13 44 44 ASP ASP D . n D 1 14 GLN 14 45 45 GLN GLN D . n D 1 15 VAL 15 46 46 VAL VAL D . n D 1 16 ARG 16 47 47 ARG ARG D . n D 1 17 GLU 17 48 48 GLU GLU D . n D 1 18 ALA 18 49 49 ALA ALA D . n D 1 19 ARG 19 50 50 ARG ARG D . n D 1 20 ILE 20 51 51 ILE ILE D . n D 1 21 ASN 21 52 52 ASN ASN D . n D 1 22 GLY 22 53 53 GLY GLY D . n D 1 23 ARG 23 54 54 ARG ARG D . n D 1 24 GLU 24 55 55 GLU GLU D . n D 1 25 ILE 25 56 56 ILE ILE D . n D 1 26 ASN 26 57 57 ASN ASN D . n D 1 27 VAL 27 58 58 VAL VAL D . n D 1 28 THR 28 59 59 THR THR D . n D 1 29 LYS 29 60 60 LYS LYS D . n D 1 30 LYS 30 61 61 LYS LYS D . n D 1 31 ASP 31 62 62 ASP ASP D . n D 1 32 SER 32 63 63 SER SER D . n D 1 33 ASN 33 64 64 ASN ASN D . n D 1 34 ARG 34 65 65 ARG ARG D . n D 1 35 TYR 35 66 66 TYR TYR D . n D 1 36 THR 36 67 67 THR THR D . n D 1 37 THR 37 68 68 THR THR D . n D 1 38 TYR 38 69 69 TYR TYR D . n D 1 39 ILE 39 70 70 ILE ILE D . n D 1 40 PRO 40 71 71 PRO PRO D . n D 1 41 VAL 41 72 72 VAL VAL D . n D 1 42 GLN 42 73 73 GLN GLN D . n D 1 43 ASP 43 74 74 ASP ASP D . n D 1 44 PRO 44 75 75 PRO PRO D . n D 1 45 LYS 45 76 76 LYS LYS D . n D 1 46 LEU 46 77 77 LEU LEU D . n D 1 47 LEU 47 78 78 LEU LEU D . n D 1 48 ASP 48 79 79 ASP ASP D . n D 1 49 ASN 49 80 80 ASN ASN D . n D 1 50 LEU 50 81 81 LEU LEU D . n D 1 51 LEU 51 82 82 LEU LEU D . n D 1 52 THR 52 83 83 THR THR D . n D 1 53 LYS 53 84 84 LYS LYS D . n D 1 54 ASN 54 85 85 ASN ASN D . n D 1 55 VAL 55 86 86 VAL VAL D . n D 1 56 LYS 56 87 87 LYS LYS D . n D 1 57 VAL 57 88 88 VAL VAL D . n D 1 58 VAL 58 89 89 VAL VAL D . n D 1 59 GLY 59 90 90 GLY GLY D . n D 1 60 GLU 60 91 91 GLU GLU D . n D 1 61 PRO 61 92 92 PRO PRO D . n D 1 62 PRO 62 93 93 PRO PRO D . n D 1 63 GLU 63 94 94 GLU GLU D . n D 1 64 GLU 64 95 95 GLU GLU D . n D 1 65 PRO 65 96 96 PRO PRO D . n E 1 1 VAL 1 32 32 VAL VAL E . n E 1 2 ASP 2 33 33 ASP ASP E . n E 1 3 TYR 3 34 34 TYR TYR E . n E 1 4 SER 4 35 35 SER SER E . n E 1 5 THR 5 36 36 THR THR E . n E 1 6 PHE 6 37 37 PHE PHE E . n E 1 7 LEU 7 38 38 LEU LEU E . n E 1 8 GLN 8 39 39 GLN GLN E . n E 1 9 GLU 9 40 40 GLU GLU E . n E 1 10 VAL 10 41 41 VAL VAL E . n E 1 11 ASN 11 42 42 ASN ASN E . n E 1 12 ASN 12 43 43 ASN ASN E . n E 1 13 ASP 13 44 44 ASP ASP E . n E 1 14 GLN 14 45 45 GLN GLN E . n E 1 15 VAL 15 46 46 VAL VAL E . n E 1 16 ARG 16 47 47 ARG ARG E . n E 1 17 GLU 17 48 48 GLU GLU E . n E 1 18 ALA 18 49 49 ALA ALA E . n E 1 19 ARG 19 50 50 ARG ARG E . n E 1 20 ILE 20 51 51 ILE ILE E . n E 1 21 ASN 21 52 52 ASN ASN E . n E 1 22 GLY 22 53 53 GLY GLY E . n E 1 23 ARG 23 54 54 ARG ARG E . n E 1 24 GLU 24 55 55 GLU GLU E . n E 1 25 ILE 25 56 56 ILE ILE E . n E 1 26 ASN 26 57 57 ASN ASN E . n E 1 27 VAL 27 58 58 VAL VAL E . n E 1 28 THR 28 59 59 THR THR E . n E 1 29 LYS 29 60 60 LYS LYS E . n E 1 30 LYS 30 61 61 LYS LYS E . n E 1 31 ASP 31 62 62 ASP ASP E . n E 1 32 SER 32 63 63 SER SER E . n E 1 33 ASN 33 64 64 ASN ASN E . n E 1 34 ARG 34 65 65 ARG ARG E . n E 1 35 TYR 35 66 66 TYR TYR E . n E 1 36 THR 36 67 67 THR THR E . n E 1 37 THR 37 68 68 THR THR E . n E 1 38 TYR 38 69 69 TYR TYR E . n E 1 39 ILE 39 70 70 ILE ILE E . n E 1 40 PRO 40 71 71 PRO PRO E . n E 1 41 VAL 41 72 72 VAL VAL E . n E 1 42 GLN 42 73 73 GLN GLN E . n E 1 43 ASP 43 74 74 ASP ASP E . n E 1 44 PRO 44 75 75 PRO PRO E . n E 1 45 LYS 45 76 76 LYS LYS E . n E 1 46 LEU 46 77 77 LEU LEU E . n E 1 47 LEU 47 78 78 LEU LEU E . n E 1 48 ASP 48 79 79 ASP ASP E . n E 1 49 ASN 49 80 80 ASN ASN E . n E 1 50 LEU 50 81 81 LEU LEU E . n E 1 51 LEU 51 82 82 LEU LEU E . n E 1 52 THR 52 83 83 THR THR E . n E 1 53 LYS 53 84 84 LYS LYS E . n E 1 54 ASN 54 85 85 ASN ASN E . n E 1 55 VAL 55 86 86 VAL VAL E . n E 1 56 LYS 56 87 87 LYS LYS E . n E 1 57 VAL 57 88 88 VAL VAL E . n E 1 58 VAL 58 89 89 VAL VAL E . n E 1 59 GLY 59 90 90 GLY GLY E . n E 1 60 GLU 60 91 91 GLU GLU E . n E 1 61 PRO 61 92 92 PRO PRO E . n E 1 62 PRO 62 93 93 PRO PRO E . n E 1 63 GLU 63 94 94 GLU GLU E . n E 1 64 GLU 64 95 95 GLU GLU E . n E 1 65 PRO 65 96 96 PRO PRO E . n F 1 1 VAL 1 32 32 VAL VAL F . n F 1 2 ASP 2 33 33 ASP ASP F . n F 1 3 TYR 3 34 34 TYR TYR F . n F 1 4 SER 4 35 35 SER SER F . n F 1 5 THR 5 36 36 THR THR F . n F 1 6 PHE 6 37 37 PHE PHE F . n F 1 7 LEU 7 38 38 LEU LEU F . n F 1 8 GLN 8 39 39 GLN GLN F . n F 1 9 GLU 9 40 40 GLU GLU F . n F 1 10 VAL 10 41 41 VAL VAL F . n F 1 11 ASN 11 42 42 ASN ASN F . n F 1 12 ASN 12 43 43 ASN ASN F . n F 1 13 ASP 13 44 44 ASP ASP F . n F 1 14 GLN 14 45 45 GLN GLN F . n F 1 15 VAL 15 46 46 VAL VAL F . n F 1 16 ARG 16 47 47 ARG ARG F . n F 1 17 GLU 17 48 48 GLU GLU F . n F 1 18 ALA 18 49 49 ALA ALA F . n F 1 19 ARG 19 50 50 ARG ARG F . n F 1 20 ILE 20 51 51 ILE ILE F . n F 1 21 ASN 21 52 52 ASN ASN F . n F 1 22 GLY 22 53 53 GLY GLY F . n F 1 23 ARG 23 54 54 ARG ARG F . n F 1 24 GLU 24 55 55 GLU GLU F . n F 1 25 ILE 25 56 56 ILE ILE F . n F 1 26 ASN 26 57 57 ASN ASN F . n F 1 27 VAL 27 58 58 VAL VAL F . n F 1 28 THR 28 59 59 THR THR F . n F 1 29 LYS 29 60 60 LYS LYS F . n F 1 30 LYS 30 61 61 LYS LYS F . n F 1 31 ASP 31 62 62 ASP ASP F . n F 1 32 SER 32 63 63 SER SER F . n F 1 33 ASN 33 64 64 ASN ASN F . n F 1 34 ARG 34 65 65 ARG ARG F . n F 1 35 TYR 35 66 66 TYR TYR F . n F 1 36 THR 36 67 67 THR THR F . n F 1 37 THR 37 68 68 THR THR F . n F 1 38 TYR 38 69 69 TYR TYR F . n F 1 39 ILE 39 70 70 ILE ILE F . n F 1 40 PRO 40 71 71 PRO PRO F . n F 1 41 VAL 41 72 72 VAL VAL F . n F 1 42 GLN 42 73 73 GLN GLN F . n F 1 43 ASP 43 74 74 ASP ASP F . n F 1 44 PRO 44 75 75 PRO PRO F . n F 1 45 LYS 45 76 76 LYS LYS F . n F 1 46 LEU 46 77 77 LEU LEU F . n F 1 47 LEU 47 78 78 LEU LEU F . n F 1 48 ASP 48 79 79 ASP ASP F . n F 1 49 ASN 49 80 80 ASN ASN F . n F 1 50 LEU 50 81 81 LEU LEU F . n F 1 51 LEU 51 82 82 LEU LEU F . n F 1 52 THR 52 83 83 THR THR F . n F 1 53 LYS 53 84 84 LYS LYS F . n F 1 54 ASN 54 85 85 ASN ASN F . n F 1 55 VAL 55 86 86 VAL VAL F . n F 1 56 LYS 56 87 87 LYS LYS F . n F 1 57 VAL 57 88 88 VAL VAL F . n F 1 58 VAL 58 89 89 VAL VAL F . n F 1 59 GLY 59 90 90 GLY GLY F . n F 1 60 GLU 60 91 91 GLU GLU F . n F 1 61 PRO 61 92 92 PRO PRO F . n F 1 62 PRO 62 93 93 PRO PRO F . n F 1 63 GLU 63 94 94 GLU GLU F . n F 1 64 GLU 64 95 95 GLU GLU F . n F 1 65 PRO 65 96 96 PRO PRO F . n # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9WUS _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9WUS _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9WUS _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9WUS _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 4.90 _refine.ls_d_res_low ? _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work ? _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'REAL-SPACE (WEIGHTED MAP SUM AT ATOM CENTERS)' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_Zscore _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.002 ? 3216 ? f_bond_d ? ? ? 'ELECTRON MICROSCOPY' ? 0.547 ? 4374 ? f_angle_d ? ? ? 'ELECTRON MICROSCOPY' ? 3.813 ? 426 ? f_dihedral_angle_d ? ? ? 'ELECTRON MICROSCOPY' ? 0.048 ? 504 ? f_chiral_restr ? ? ? 'ELECTRON MICROSCOPY' ? 0.003 ? 588 ? f_plane_restr ? ? ? # _struct.entry_id 9WUS _struct.title 'Cryo-EM Structure of the Periplasmic Domain of AAA Protease FtsH' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9WUS _struct_keywords.text 'AAA+ Protease, Transmembrane Domain FtsH, MEMBRANE PROTEIN' _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 1 ? F N N 1 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code FTSH_ECOLI _struct_ref.pdbx_db_accession P0AAI3 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code VDYSTFLQEVNNDQVREARINGREINVTKKDSNRYTTYIPVQDPKLLDNLLTKNVKVVGEPPEEP _struct_ref.pdbx_align_begin 32 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9WUS A 1 ? 65 ? P0AAI3 32 ? 96 ? 32 96 2 1 9WUS B 1 ? 65 ? P0AAI3 32 ? 96 ? 32 96 3 1 9WUS C 1 ? 65 ? P0AAI3 32 ? 96 ? 32 96 4 1 9WUS D 1 ? 65 ? P0AAI3 32 ? 96 ? 32 96 5 1 9WUS E 1 ? 65 ? P0AAI3 32 ? 96 ? 32 96 6 1 9WUS F 1 ? 65 ? P0AAI3 32 ? 96 ? 32 96 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0 _pdbx_struct_oper_list.matrix[1][2] 0.0 _pdbx_struct_oper_list.matrix[1][3] 0.0 _pdbx_struct_oper_list.vector[1] 0.0 _pdbx_struct_oper_list.matrix[2][1] 0.0 _pdbx_struct_oper_list.matrix[2][2] 1.0 _pdbx_struct_oper_list.matrix[2][3] 0.0 _pdbx_struct_oper_list.vector[2] 0.0 _pdbx_struct_oper_list.matrix[3][1] 0.0 _pdbx_struct_oper_list.matrix[3][2] 0.0 _pdbx_struct_oper_list.matrix[3][3] 1.0 _pdbx_struct_oper_list.vector[3] 0.0 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 2 ? ASN A 11 ? ASP A 33 ASN A 42 1 ? 10 HELX_P HELX_P2 AA2 LEU A 46 ? THR A 52 ? LEU A 77 THR A 83 1 ? 7 HELX_P HELX_P3 AA3 ASP B 2 ? ASN B 11 ? ASP B 33 ASN B 42 1 ? 10 HELX_P HELX_P4 AA4 LEU B 46 ? THR B 52 ? LEU B 77 THR B 83 1 ? 7 HELX_P HELX_P5 AA5 ASP C 2 ? ASN C 11 ? ASP C 33 ASN C 42 1 ? 10 HELX_P HELX_P6 AA6 LEU C 46 ? THR C 52 ? LEU C 77 THR C 83 1 ? 7 HELX_P HELX_P7 AA7 ASP D 2 ? ASN D 11 ? ASP D 33 ASN D 42 1 ? 10 HELX_P HELX_P8 AA8 LEU D 46 ? THR D 52 ? LEU D 77 THR D 83 1 ? 7 HELX_P HELX_P9 AA9 ASP E 2 ? ASN E 11 ? ASP E 33 ASN E 42 1 ? 10 HELX_P HELX_P10 AB1 LEU E 46 ? THR E 52 ? LEU E 77 THR E 83 1 ? 7 HELX_P HELX_P11 AB2 ASP F 2 ? ASN F 11 ? ASP F 33 ASN F 42 1 ? 10 HELX_P HELX_P12 AB3 LEU F 46 ? THR F 52 ? LEU F 77 THR F 83 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 4 ? AA3 ? 4 ? AA4 ? 4 ? AA5 ? 4 ? AA6 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA6 3 4 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ARG A 34 ? TYR A 38 ? ARG A 65 TYR A 69 AA1 2 GLU A 24 ? LYS A 29 ? GLU A 55 LYS A 60 AA1 3 VAL A 15 ? ASN A 21 ? VAL A 46 ASN A 52 AA1 4 LYS A 56 ? GLY A 59 ? LYS A 87 GLY A 90 AA2 1 ARG B 34 ? TYR B 38 ? ARG B 65 TYR B 69 AA2 2 GLU B 24 ? LYS B 29 ? GLU B 55 LYS B 60 AA2 3 VAL B 15 ? ASN B 21 ? VAL B 46 ASN B 52 AA2 4 LYS B 56 ? GLY B 59 ? LYS B 87 GLY B 90 AA3 1 ARG C 34 ? TYR C 38 ? ARG C 65 TYR C 69 AA3 2 GLU C 24 ? LYS C 29 ? GLU C 55 LYS C 60 AA3 3 VAL C 15 ? ASN C 21 ? VAL C 46 ASN C 52 AA3 4 LYS C 56 ? GLY C 59 ? LYS C 87 GLY C 90 AA4 1 ARG D 34 ? TYR D 38 ? ARG D 65 TYR D 69 AA4 2 GLU D 24 ? LYS D 29 ? GLU D 55 LYS D 60 AA4 3 VAL D 15 ? ASN D 21 ? VAL D 46 ASN D 52 AA4 4 LYS D 56 ? GLY D 59 ? LYS D 87 GLY D 90 AA5 1 ARG E 34 ? TYR E 38 ? ARG E 65 TYR E 69 AA5 2 GLU E 24 ? LYS E 29 ? GLU E 55 LYS E 60 AA5 3 VAL E 15 ? ASN E 21 ? VAL E 46 ASN E 52 AA5 4 LYS E 56 ? GLY E 59 ? LYS E 87 GLY E 90 AA6 1 ARG F 34 ? TYR F 38 ? ARG F 65 TYR F 69 AA6 2 GLU F 24 ? LYS F 29 ? GLU F 55 LYS F 60 AA6 3 VAL F 15 ? ASN F 21 ? VAL F 46 ASN F 52 AA6 4 LYS F 56 ? GLY F 59 ? LYS F 87 GLY F 90 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O THR A 37 ? O THR A 68 N ILE A 25 ? N ILE A 56 AA1 2 3 O THR A 28 ? O THR A 59 N ARG A 16 ? N ARG A 47 AA1 3 4 N ILE A 20 ? N ILE A 51 O VAL A 58 ? O VAL A 89 AA2 1 2 O THR B 37 ? O THR B 68 N ILE B 25 ? N ILE B 56 AA2 2 3 O THR B 28 ? O THR B 59 N ARG B 16 ? N ARG B 47 AA2 3 4 N ILE B 20 ? N ILE B 51 O VAL B 58 ? O VAL B 89 AA3 1 2 O THR C 37 ? O THR C 68 N ILE C 25 ? N ILE C 56 AA3 2 3 O THR C 28 ? O THR C 59 N ARG C 16 ? N ARG C 47 AA3 3 4 N ILE C 20 ? N ILE C 51 O VAL C 58 ? O VAL C 89 AA4 1 2 O THR D 37 ? O THR D 68 N ILE D 25 ? N ILE D 56 AA4 2 3 O THR D 28 ? O THR D 59 N ARG D 16 ? N ARG D 47 AA4 3 4 N ILE D 20 ? N ILE D 51 O VAL D 58 ? O VAL D 89 AA5 1 2 O THR E 37 ? O THR E 68 N ILE E 25 ? N ILE E 56 AA5 2 3 O THR E 28 ? O THR E 59 N ARG E 16 ? N ARG E 47 AA5 3 4 N ILE E 20 ? N ILE E 51 O VAL E 58 ? O VAL E 89 AA6 1 2 O THR F 37 ? O THR F 68 N ILE F 25 ? N ILE F 56 AA6 2 3 O THR F 28 ? O THR F 59 N ARG F 16 ? N ARG F 47 AA6 3 4 N ILE F 20 ? N ILE F 51 O VAL F 58 ? O VAL F 89 # _pdbx_entry_details.entry_id 9WUS _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 52 ? ? -150.64 88.05 2 1 LEU A 77 ? ? -120.20 -53.61 3 1 ASN B 52 ? ? -150.67 88.12 4 1 LEU B 77 ? ? -120.12 -53.63 5 1 ASN C 52 ? ? -150.64 88.06 6 1 LEU C 77 ? ? -120.16 -53.63 7 1 ASN D 52 ? ? -150.68 88.05 8 1 LEU D 77 ? ? -120.13 -53.64 9 1 ASN E 52 ? ? -150.63 88.09 10 1 LEU E 77 ? ? -120.15 -53.61 11 1 ASN F 52 ? ? -150.68 88.12 12 1 LEU F 77 ? ? -120.20 -53.66 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9WUS _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol 'AB INITIO MODEL' # _em_3d_fitting_list.id 1 _em_3d_fitting_list.3d_fitting_id 1 _em_3d_fitting_list.pdb_entry_id 7wi3 _em_3d_fitting_list.pdb_chain_id ? _em_3d_fitting_list.pdb_chain_residue_range ? _em_3d_fitting_list.details ? _em_3d_fitting_list.chain_id ? _em_3d_fitting_list.chain_residue_range ? _em_3d_fitting_list.source_name PDB _em_3d_fitting_list.type 'experimental model' _em_3d_fitting_list.accession_code 7wi3 _em_3d_fitting_list.initial_refinement_model_id 1 # _em_3d_reconstruction.entry_id 9WUS _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 4.9 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 9590 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 8.0 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source NATURAL _em_entity_assembly.type CELL _em_entity_assembly.name 'Periplasmic Domain of AAA Protease FtsH' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_image_scans.entry_id 9WUS _em_image_scans.id 1 _em_image_scans.number_digital_images ? _em_image_scans.details ? _em_image_scans.scanner_model ? _em_image_scans.sampling_size ? _em_image_scans.od_range ? _em_image_scans.quant_bit_size ? _em_image_scans.citation_id ? _em_image_scans.dimension_height ? _em_image_scans.dimension_width ? _em_image_scans.frames_per_image 48 _em_image_scans.image_recording_id 1 _em_image_scans.used_frames_per_image ? # _em_imaging.entry_id 9WUS _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'FEI TALOS ARCTICA' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 200 _em_imaging.illumination_mode OTHER _em_imaging.mode OTHER _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 800 _em_imaging.nominal_defocus_max 2000 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification 130000 _em_imaging.calibrated_magnification ? _em_imaging.electron_source OTHER _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen NITROGEN _em_imaging.objective_aperture ? _em_imaging.microscope_serial_number ? _em_imaging.microscope_version ? # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material ? _em_sample_support.grid_mesh_size ? _em_sample_support.grid_type 'Quantifoil R1.2/1.3' _em_sample_support.details ? _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 9WUS _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE-PROPANE _em_vitrification.humidity 80 _em_vitrification.temp ? _em_vitrification.chamber_temperature 289.15 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 9WUS _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 9WUS _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry C6 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 ILE N N N N 123 ILE CA C N S 124 ILE C C N N 125 ILE O O N N 126 ILE CB C N S 127 ILE CG1 C N N 128 ILE CG2 C N N 129 ILE CD1 C N N 130 ILE OXT O N N 131 ILE H H N N 132 ILE H2 H N N 133 ILE HA H N N 134 ILE HB H N N 135 ILE HG12 H N N 136 ILE HG13 H N N 137 ILE HG21 H N N 138 ILE HG22 H N N 139 ILE HG23 H N N 140 ILE HD11 H N N 141 ILE HD12 H N N 142 ILE HD13 H N N 143 ILE HXT H N N 144 LEU N N N N 145 LEU CA C N S 146 LEU C C N N 147 LEU O O N N 148 LEU CB C N N 149 LEU CG C N N 150 LEU CD1 C N N 151 LEU CD2 C N N 152 LEU OXT O N N 153 LEU H H N N 154 LEU H2 H N N 155 LEU HA H N N 156 LEU HB2 H N N 157 LEU HB3 H N N 158 LEU HG H N N 159 LEU HD11 H N N 160 LEU HD12 H N N 161 LEU HD13 H N N 162 LEU HD21 H N N 163 LEU HD22 H N N 164 LEU HD23 H N N 165 LEU HXT H N N 166 LYS N N N N 167 LYS CA C N S 168 LYS C C N N 169 LYS O O N N 170 LYS CB C N N 171 LYS CG C N N 172 LYS CD C N N 173 LYS CE C N N 174 LYS NZ N N N 175 LYS OXT O N N 176 LYS H H N N 177 LYS H2 H N N 178 LYS HA H N N 179 LYS HB2 H N N 180 LYS HB3 H N N 181 LYS HG2 H N N 182 LYS HG3 H N N 183 LYS HD2 H N N 184 LYS HD3 H N N 185 LYS HE2 H N N 186 LYS HE3 H N N 187 LYS HZ1 H N N 188 LYS HZ2 H N N 189 LYS HZ3 H N N 190 LYS HXT H N N 191 PHE N N N N 192 PHE CA C N S 193 PHE C C N N 194 PHE O O N N 195 PHE CB C N N 196 PHE CG C Y N 197 PHE CD1 C Y N 198 PHE CD2 C Y N 199 PHE CE1 C Y N 200 PHE CE2 C Y N 201 PHE CZ C Y N 202 PHE OXT O N N 203 PHE H H N N 204 PHE H2 H N N 205 PHE HA H N N 206 PHE HB2 H N N 207 PHE HB3 H N N 208 PHE HD1 H N N 209 PHE HD2 H N N 210 PHE HE1 H N N 211 PHE HE2 H N N 212 PHE HZ H N N 213 PHE HXT H N N 214 PRO N N N N 215 PRO CA C N S 216 PRO C C N N 217 PRO O O N N 218 PRO CB C N N 219 PRO CG C N N 220 PRO CD C N N 221 PRO OXT O N N 222 PRO H H N N 223 PRO HA H N N 224 PRO HB2 H N N 225 PRO HB3 H N N 226 PRO HG2 H N N 227 PRO HG3 H N N 228 PRO HD2 H N N 229 PRO HD3 H N N 230 PRO HXT H N N 231 SER N N N N 232 SER CA C N S 233 SER C C N N 234 SER O O N N 235 SER CB C N N 236 SER OG O N N 237 SER OXT O N N 238 SER H H N N 239 SER H2 H N N 240 SER HA H N N 241 SER HB2 H N N 242 SER HB3 H N N 243 SER HG H N N 244 SER HXT H N N 245 THR N N N N 246 THR CA C N S 247 THR C C N N 248 THR O O N N 249 THR CB C N R 250 THR OG1 O N N 251 THR CG2 C N N 252 THR OXT O N N 253 THR H H N N 254 THR H2 H N N 255 THR HA H N N 256 THR HB H N N 257 THR HG1 H N N 258 THR HG21 H N N 259 THR HG22 H N N 260 THR HG23 H N N 261 THR HXT H N N 262 TYR N N N N 263 TYR CA C N S 264 TYR C C N N 265 TYR O O N N 266 TYR CB C N N 267 TYR CG C Y N 268 TYR CD1 C Y N 269 TYR CD2 C Y N 270 TYR CE1 C Y N 271 TYR CE2 C Y N 272 TYR CZ C Y N 273 TYR OH O N N 274 TYR OXT O N N 275 TYR H H N N 276 TYR H2 H N N 277 TYR HA H N N 278 TYR HB2 H N N 279 TYR HB3 H N N 280 TYR HD1 H N N 281 TYR HD2 H N N 282 TYR HE1 H N N 283 TYR HE2 H N N 284 TYR HH H N N 285 TYR HXT H N N 286 VAL N N N N 287 VAL CA C N S 288 VAL C C N N 289 VAL O O N N 290 VAL CB C N N 291 VAL CG1 C N N 292 VAL CG2 C N N 293 VAL OXT O N N 294 VAL H H N N 295 VAL H2 H N N 296 VAL HA H N N 297 VAL HB H N N 298 VAL HG11 H N N 299 VAL HG12 H N N 300 VAL HG13 H N N 301 VAL HG21 H N N 302 VAL HG22 H N N 303 VAL HG23 H N N 304 VAL HXT H N N 305 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 ILE N CA sing N N 116 ILE N H sing N N 117 ILE N H2 sing N N 118 ILE CA C sing N N 119 ILE CA CB sing N N 120 ILE CA HA sing N N 121 ILE C O doub N N 122 ILE C OXT sing N N 123 ILE CB CG1 sing N N 124 ILE CB CG2 sing N N 125 ILE CB HB sing N N 126 ILE CG1 CD1 sing N N 127 ILE CG1 HG12 sing N N 128 ILE CG1 HG13 sing N N 129 ILE CG2 HG21 sing N N 130 ILE CG2 HG22 sing N N 131 ILE CG2 HG23 sing N N 132 ILE CD1 HD11 sing N N 133 ILE CD1 HD12 sing N N 134 ILE CD1 HD13 sing N N 135 ILE OXT HXT sing N N 136 LEU N CA sing N N 137 LEU N H sing N N 138 LEU N H2 sing N N 139 LEU CA C sing N N 140 LEU CA CB sing N N 141 LEU CA HA sing N N 142 LEU C O doub N N 143 LEU C OXT sing N N 144 LEU CB CG sing N N 145 LEU CB HB2 sing N N 146 LEU CB HB3 sing N N 147 LEU CG CD1 sing N N 148 LEU CG CD2 sing N N 149 LEU CG HG sing N N 150 LEU CD1 HD11 sing N N 151 LEU CD1 HD12 sing N N 152 LEU CD1 HD13 sing N N 153 LEU CD2 HD21 sing N N 154 LEU CD2 HD22 sing N N 155 LEU CD2 HD23 sing N N 156 LEU OXT HXT sing N N 157 LYS N CA sing N N 158 LYS N H sing N N 159 LYS N H2 sing N N 160 LYS CA C sing N N 161 LYS CA CB sing N N 162 LYS CA HA sing N N 163 LYS C O doub N N 164 LYS C OXT sing N N 165 LYS CB CG sing N N 166 LYS CB HB2 sing N N 167 LYS CB HB3 sing N N 168 LYS CG CD sing N N 169 LYS CG HG2 sing N N 170 LYS CG HG3 sing N N 171 LYS CD CE sing N N 172 LYS CD HD2 sing N N 173 LYS CD HD3 sing N N 174 LYS CE NZ sing N N 175 LYS CE HE2 sing N N 176 LYS CE HE3 sing N N 177 LYS NZ HZ1 sing N N 178 LYS NZ HZ2 sing N N 179 LYS NZ HZ3 sing N N 180 LYS OXT HXT sing N N 181 PHE N CA sing N N 182 PHE N H sing N N 183 PHE N H2 sing N N 184 PHE CA C sing N N 185 PHE CA CB sing N N 186 PHE CA HA sing N N 187 PHE C O doub N N 188 PHE C OXT sing N N 189 PHE CB CG sing N N 190 PHE CB HB2 sing N N 191 PHE CB HB3 sing N N 192 PHE CG CD1 doub Y N 193 PHE CG CD2 sing Y N 194 PHE CD1 CE1 sing Y N 195 PHE CD1 HD1 sing N N 196 PHE CD2 CE2 doub Y N 197 PHE CD2 HD2 sing N N 198 PHE CE1 CZ doub Y N 199 PHE CE1 HE1 sing N N 200 PHE CE2 CZ sing Y N 201 PHE CE2 HE2 sing N N 202 PHE CZ HZ sing N N 203 PHE OXT HXT sing N N 204 PRO N CA sing N N 205 PRO N CD sing N N 206 PRO N H sing N N 207 PRO CA C sing N N 208 PRO CA CB sing N N 209 PRO CA HA sing N N 210 PRO C O doub N N 211 PRO C OXT sing N N 212 PRO CB CG sing N N 213 PRO CB HB2 sing N N 214 PRO CB HB3 sing N N 215 PRO CG CD sing N N 216 PRO CG HG2 sing N N 217 PRO CG HG3 sing N N 218 PRO CD HD2 sing N N 219 PRO CD HD3 sing N N 220 PRO OXT HXT sing N N 221 SER N CA sing N N 222 SER N H sing N N 223 SER N H2 sing N N 224 SER CA C sing N N 225 SER CA CB sing N N 226 SER CA HA sing N N 227 SER C O doub N N 228 SER C OXT sing N N 229 SER CB OG sing N N 230 SER CB HB2 sing N N 231 SER CB HB3 sing N N 232 SER OG HG sing N N 233 SER OXT HXT sing N N 234 THR N CA sing N N 235 THR N H sing N N 236 THR N H2 sing N N 237 THR CA C sing N N 238 THR CA CB sing N N 239 THR CA HA sing N N 240 THR C O doub N N 241 THR C OXT sing N N 242 THR CB OG1 sing N N 243 THR CB CG2 sing N N 244 THR CB HB sing N N 245 THR OG1 HG1 sing N N 246 THR CG2 HG21 sing N N 247 THR CG2 HG22 sing N N 248 THR CG2 HG23 sing N N 249 THR OXT HXT sing N N 250 TYR N CA sing N N 251 TYR N H sing N N 252 TYR N H2 sing N N 253 TYR CA C sing N N 254 TYR CA CB sing N N 255 TYR CA HA sing N N 256 TYR C O doub N N 257 TYR C OXT sing N N 258 TYR CB CG sing N N 259 TYR CB HB2 sing N N 260 TYR CB HB3 sing N N 261 TYR CG CD1 doub Y N 262 TYR CG CD2 sing Y N 263 TYR CD1 CE1 sing Y N 264 TYR CD1 HD1 sing N N 265 TYR CD2 CE2 doub Y N 266 TYR CD2 HD2 sing N N 267 TYR CE1 CZ doub Y N 268 TYR CE1 HE1 sing N N 269 TYR CE2 CZ sing Y N 270 TYR CE2 HE2 sing N N 271 TYR CZ OH sing N N 272 TYR OH HH sing N N 273 TYR OXT HXT sing N N 274 VAL N CA sing N N 275 VAL N H sing N N 276 VAL N H2 sing N N 277 VAL CA C sing N N 278 VAL CA CB sing N N 279 VAL CA HA sing N N 280 VAL C O doub N N 281 VAL C OXT sing N N 282 VAL CB CG1 sing N N 283 VAL CB CG2 sing N N 284 VAL CB HB sing N N 285 VAL CG1 HG11 sing N N 286 VAL CG1 HG12 sing N N 287 VAL CG1 HG13 sing N N 288 VAL CG2 HG21 sing N N 289 VAL CG2 HG22 sing N N 290 VAL CG2 HG23 sing N N 291 VAL OXT HXT sing N N 292 # _em_admin.current_status REL _em_admin.deposition_date 2025-09-18 _em_admin.deposition_site PDBJ _em_admin.entry_id 9WUS _em_admin.last_update 2026-05-13 _em_admin.map_release_date 2026-05-13 _em_admin.title 'Cryo-EM Structure of the Periplasmic Domain of AAA Protease FtsH' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 562 _em_entity_assembly_naturalsource.organism 'Escherichia coli' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 83333 _em_entity_assembly_recombinant.organism 'Escherichia coli K-12' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time 12 _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 61.3 _em_image_recording.details ? _em_image_recording.detector_mode SUPER-RESOLUTION _em_image_recording.film_or_detector_model 'GATAN K2 SUMMIT (4k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # _em_imaging_optics.chr_aberration_corrector ? _em_imaging_optics.energyfilter_lower ? _em_imaging_optics.energyfilter_slit_width 20 _em_imaging_optics.energyfilter_name 'GIF Quantum ER' _em_imaging_optics.energyfilter_upper ? _em_imaging_optics.id 1 _em_imaging_optics.imaging_id 1 _em_imaging_optics.phase_plate ? _em_imaging_optics.sph_aberration_corrector ? _em_imaging_optics.details ? # _em_particle_selection.details ? _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.method ? _em_particle_selection.num_particles_selected 1572084 _em_particle_selection.reference_model ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version _em_software.reference_DOI 'PARTICLE SELECTION' ? 1 1 ? ? RELION ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 EPU ? ? MASKING ? 3 ? ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? RELION ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? ? 'MODEL FITTING' ? 7 ? 1 ? MOLREP ? ? OTHER ? 8 ? ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 9 1 ? ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? ? CLASSIFICATION ? 11 1 ? ? RELION ? ? RECONSTRUCTION ? 12 1 ? ? RELION ? ? 'VOLUME SELECTION' ? 13 1 1 1 ? ? ? 'SERIES ALIGNMENT' ? 14 1 1 1 ? ? ? 'MOLECULAR REPLACEMENT' ? 15 1 1 1 ? ? ? 'LATTICE DISTORTION CORRECTION' ? 16 1 1 1 ? ? ? 'SYMMETRY DETERMINATION' ? 17 1 1 1 ? ? ? 'CRYSTALLOGRAPHY MERGING' ? 18 1 1 1 ? ? ? 'MODEL REFINEMENT' ? 19 ? 1 ? PHENIX ? ? # _em_specimen.concentration 0.35 _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Biotechnology and Biological Sciences Research Council (BBSRC)' 'United Kingdom' BB/P000940/1 1 'Wellcome Trust' 'United Kingdom' 210701/Z/18/Z 2 'Other government' Turkey 'TUBITAK - 118C225' 3 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 7wi3 _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 9WUS _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O # loop_ #