HEADER TRANSFERASE 27-SEP-25 9WYR TITLE STRUCTURAL BASIS OF SIGNAL ACTIVATION AND TRANSDUCTION BY CHITIN TITLE 2 ELICITOR RECEPTOR KINASE 1 IN ORYZA SATIVA COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHITIN ELICITOR RECEPTOR KINASE 1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: OSCERK1,LYSM DOMAIN RECEPTOR-LIKE KINASE 1,LYSM RLK1,LYSM- COMPND 5 CONTAINING RECEPTOR-LIKE KINASE 1,LYSM DOMAIN RECEPTOR-LIKE KINASE 9, COMPND 6 OSLYSM-RLK9; COMPND 7 EC: 2.7.11.1; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ORYZA SATIVA JAPONICA GROUP; SOURCE 3 ORGANISM_COMMON: JAPANESE RICE; SOURCE 4 ORGANISM_TAXID: 39947; SOURCE 5 GENE: CERK1, RLK9, OS08G0538300, LOC_OS08G42580, P0665C04.34, SOURCE 6 P0666G10.101; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 866768 KEYWDS OSCERK1-KD-K351R-ATP COMPLEX, THE KINASE DOMAIN MUTANT K351R OF KEYWDS 2 OSCERK1 BOUND TO ATP IN THE NORMALLY PURIFIED STATE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR Z.H.SU,Z.H.MING REVDAT 2 18-FEB-26 9WYR 1 JRNL REVDAT 1 28-JAN-26 9WYR 0 JRNL AUTH Z.SU,S.ZHOU,S.YU,X.NING,Q.FU,Q.FU,Q.ZHAO,J.MA,C.NIU,Y.KONG, JRNL AUTH 2 Y.PENG,Z.MING JRNL TITL STRUCTURAL BASIS OF OSCERK1-MEDIATED SIGNAL ACTIVATION AND JRNL TITL 2 TRANSDUCTION IN RICE IMMUNITY AND SYMBIOSIS. JRNL REF PLANT COMMUN. 01677 2025 JRNL REFN ISSN 2590-3462 JRNL PMID 41403133 JRNL DOI 10.1016/J.XPLC.2025.101677 REMARK 2 REMARK 2 RESOLUTION. 2.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.15_3459 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 74.43 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 94.9 REMARK 3 NUMBER OF REFLECTIONS : 26106 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.237 REMARK 3 R VALUE (WORKING SET) : 0.235 REMARK 3 FREE R VALUE : 0.270 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 2006 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9WYR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 30-SEP-25. REMARK 100 THE DEPOSITION ID IS D_1300064181. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-SEP-25 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL02U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979183 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 S 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : AUTOPROC REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26159 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.550 REMARK 200 RESOLUTION RANGE LOW (A) : 94.190 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.0 REMARK 200 DATA REDUNDANCY : 9.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.69 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: (0.009 M CITRIC, 0.02M B-T PROPANE) PH REMARK 280 7.1, 1.1% V/V TACSIMATETM PH 7.0, 0.007 M HEPES PH 7.0, 0.009 M REMARK 280 HEPES PH 7.5, 1.8% V/V JEFFAMINE M-600, 0.09 M LITHIUM CHLORIDE, REMARK 280 7.5% W/V POLYETHYLENE GLYCOL 3,350, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 40.48567 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 80.97133 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 80.97133 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 40.48567 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2200 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 108.75700 REMARK 350 BIOMT2 2 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 -40.48567 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 980 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12870 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 894 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 303 REMARK 465 ILE A 304 REMARK 465 THR A 305 REMARK 465 VAL A 306 REMARK 465 ASP A 307 REMARK 465 LYS A 308 REMARK 465 ALA A 357 REMARK 465 THR A 358 REMARK 465 HIS A 359 REMARK 465 GLU A 360 REMARK 465 PHE A 361 REMARK 465 VAL A 436 REMARK 465 PRO A 437 REMARK 465 VAL A 438 REMARK 465 THR A 468 REMARK 465 GLU A 469 REMARK 465 VAL A 470 REMARK 465 GLY A 471 REMARK 465 GLY A 472 REMARK 465 THR A 473 REMARK 465 SER A 474 REMARK 465 MET A 475 REMARK 465 PRO A 476 REMARK 465 THR A 477 REMARK 465 GLY A 478 REMARK 465 THR A 479 REMARK 465 ARG A 480 REMARK 465 VAL A 481 REMARK 465 THR A 525 REMARK 465 GLU A 526 REMARK 465 SER A 527 REMARK 465 SER A 528 REMARK 465 SER A 529 REMARK 465 ASP A 530 REMARK 465 THR A 602 REMARK 465 SER A 603 REMARK 465 GLU A 604 REMARK 465 GLY B 303 REMARK 465 ILE B 304 REMARK 465 THR B 305 REMARK 465 VAL B 306 REMARK 465 ASP B 307 REMARK 465 LYS B 308 REMARK 465 SER B 309 REMARK 465 MET B 355 REMARK 465 GLN B 356 REMARK 465 ALA B 357 REMARK 465 THR B 358 REMARK 465 HIS B 359 REMARK 465 GLU B 360 REMARK 465 PHE B 361 REMARK 465 LEU B 362 REMARK 465 SER B 386 REMARK 465 LYS B 466 REMARK 465 LEU B 467 REMARK 465 THR B 468 REMARK 465 GLU B 469 REMARK 465 VAL B 470 REMARK 465 GLY B 471 REMARK 465 GLY B 472 REMARK 465 THR B 473 REMARK 465 SER B 474 REMARK 465 MET B 475 REMARK 465 PRO B 476 REMARK 465 THR B 477 REMARK 465 GLY B 478 REMARK 465 THR B 479 REMARK 465 ARG B 480 REMARK 465 VAL B 481 REMARK 465 ARG B 523 REMARK 465 SER B 524 REMARK 465 THR B 525 REMARK 465 GLU B 526 REMARK 465 SER B 527 REMARK 465 SER B 528 REMARK 465 SER B 529 REMARK 465 ASP B 530 REMARK 465 SER B 531 REMARK 465 PRO B 545 REMARK 465 ASP B 546 REMARK 465 SER B 601 REMARK 465 THR B 602 REMARK 465 SER B 603 REMARK 465 GLU B 604 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLU B 311 O HOH B 801 1.82 REMARK 500 O ILE B 330 O HOH B 802 1.87 REMARK 500 OE2 GLU B 316 O HOH B 803 1.91 REMARK 500 O HOH B 808 O HOH B 837 1.95 REMARK 500 O HOH A 890 O HOH A 895 1.95 REMARK 500 OG1 THR A 579 O HOH A 801 2.02 REMARK 500 OE2 GLU A 561 O HOH A 802 2.06 REMARK 500 O PHE A 462 O HOH A 803 2.07 REMARK 500 NH1 ARG A 523 O HOH A 804 2.11 REMARK 500 O HOH A 853 O HOH A 868 2.12 REMARK 500 O ALA B 447 O HOH B 804 2.13 REMARK 500 O PHE B 462 O HOH B 805 2.17 REMARK 500 O ASN A 319 O HOH A 805 2.17 REMARK 500 O HOH A 821 O HOH A 885 2.18 REMARK 500 N LYS A 347 O HOH A 806 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU A 315 NZ LYS A 576 5544 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 386 -65.54 71.40 REMARK 500 ASP A 452 -167.47 -112.03 REMARK 500 ARG B 405 -31.95 -135.78 REMARK 500 ASP B 443 45.45 -144.07 REMARK 500 ASP B 562 -19.17 -49.40 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 897 DISTANCE = 7.11 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 702 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 448 OD1 REMARK 620 2 ASP A 461 OD2 73.7 REMARK 620 3 ATP A 701 O1G 82.3 83.4 REMARK 620 4 ATP A 701 O2B 160.4 86.8 92.8 REMARK 620 5 ATP A 701 O1A 134.6 151.5 100.5 64.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 702 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ATP B 701 O2G REMARK 620 2 HOH B 830 O 83.3 REMARK 620 N 1 DBREF1 9WYR A 303 604 UNP CERK1_ORYSJ DBREF2 9WYR A A0A0P0XII1 303 604 DBREF1 9WYR B 303 604 UNP CERK1_ORYSJ DBREF2 9WYR B A0A0P0XII1 303 604 SEQADV 9WYR ARG A 351 UNP A0A0P0XII LYS 351 CONFLICT SEQADV 9WYR ARG B 351 UNP A0A0P0XII LYS 351 CONFLICT SEQRES 1 A 302 GLY ILE THR VAL ASP LYS SER VAL GLU PHE SER TYR GLU SEQRES 2 A 302 GLU LEU SER ASN ALA THR GLN GLY PHE SER ILE GLY ASN SEQRES 3 A 302 LYS ILE GLY GLN GLY GLY PHE GLY ALA VAL TYR TYR ALA SEQRES 4 A 302 GLU LEU ARG GLY GLU LYS ALA ALA ILE ARG LYS MET ASP SEQRES 5 A 302 MET GLN ALA THR HIS GLU PHE LEU ALA GLU LEU LYS VAL SEQRES 6 A 302 LEU THR HIS VAL HIS HIS LEU ASN LEU VAL ARG LEU ILE SEQRES 7 A 302 GLY TYR CYS ILE GLU SER SER LEU PHE LEU VAL TYR GLU SEQRES 8 A 302 PHE ILE GLU ASN GLY ASN LEU SER GLN HIS LEU ARG GLY SEQRES 9 A 302 MET GLY TYR GLU PRO LEU SER TRP ALA ALA ARG ILE GLN SEQRES 10 A 302 ILE ALA LEU ASP SER ALA ARG GLY LEU GLU TYR ILE HIS SEQRES 11 A 302 GLU HIS THR VAL PRO VAL TYR ILE HIS ARG ASP ILE LYS SEQRES 12 A 302 SER ALA ASN ILE LEU ILE ASP LYS ASN TYR ARG ALA LYS SEQRES 13 A 302 VAL ALA ASP PHE GLY LEU THR LYS LEU THR GLU VAL GLY SEQRES 14 A 302 GLY THR SER MET PRO THR GLY THR ARG VAL VAL GLY THR SEQRES 15 A 302 PHE GLY TYR MET PRO PRO GLU TYR ALA ARG TYR GLY ASP SEQRES 16 A 302 VAL SER PRO LYS VAL ASP VAL TYR ALA PHE GLY VAL VAL SEQRES 17 A 302 LEU TYR GLU LEU ILE SER ALA LYS GLU ALA ILE VAL ARG SEQRES 18 A 302 SER THR GLU SER SER SER ASP SER LYS GLY LEU VAL TYR SEQRES 19 A 302 LEU PHE GLU GLU ALA LEU ASN SER PRO ASP PRO LYS GLU SEQRES 20 A 302 GLY LEU ARG THR LEU ILE ASP PRO LYS LEU GLY GLU ASP SEQRES 21 A 302 TYR PRO ILE ASP SER ILE LEU LYS LEU THR GLN LEU ALA SEQRES 22 A 302 LYS VAL CYS THR GLN GLU ASP PRO LYS LEU ARG PRO SER SEQRES 23 A 302 MET ARG SER VAL VAL VAL ALA LEU MET THR LEU SER SER SEQRES 24 A 302 THR SER GLU SEQRES 1 B 302 GLY ILE THR VAL ASP LYS SER VAL GLU PHE SER TYR GLU SEQRES 2 B 302 GLU LEU SER ASN ALA THR GLN GLY PHE SER ILE GLY ASN SEQRES 3 B 302 LYS ILE GLY GLN GLY GLY PHE GLY ALA VAL TYR TYR ALA SEQRES 4 B 302 GLU LEU ARG GLY GLU LYS ALA ALA ILE ARG LYS MET ASP SEQRES 5 B 302 MET GLN ALA THR HIS GLU PHE LEU ALA GLU LEU LYS VAL SEQRES 6 B 302 LEU THR HIS VAL HIS HIS LEU ASN LEU VAL ARG LEU ILE SEQRES 7 B 302 GLY TYR CYS ILE GLU SER SER LEU PHE LEU VAL TYR GLU SEQRES 8 B 302 PHE ILE GLU ASN GLY ASN LEU SER GLN HIS LEU ARG GLY SEQRES 9 B 302 MET GLY TYR GLU PRO LEU SER TRP ALA ALA ARG ILE GLN SEQRES 10 B 302 ILE ALA LEU ASP SER ALA ARG GLY LEU GLU TYR ILE HIS SEQRES 11 B 302 GLU HIS THR VAL PRO VAL TYR ILE HIS ARG ASP ILE LYS SEQRES 12 B 302 SER ALA ASN ILE LEU ILE ASP LYS ASN TYR ARG ALA LYS SEQRES 13 B 302 VAL ALA ASP PHE GLY LEU THR LYS LEU THR GLU VAL GLY SEQRES 14 B 302 GLY THR SER MET PRO THR GLY THR ARG VAL VAL GLY THR SEQRES 15 B 302 PHE GLY TYR MET PRO PRO GLU TYR ALA ARG TYR GLY ASP SEQRES 16 B 302 VAL SER PRO LYS VAL ASP VAL TYR ALA PHE GLY VAL VAL SEQRES 17 B 302 LEU TYR GLU LEU ILE SER ALA LYS GLU ALA ILE VAL ARG SEQRES 18 B 302 SER THR GLU SER SER SER ASP SER LYS GLY LEU VAL TYR SEQRES 19 B 302 LEU PHE GLU GLU ALA LEU ASN SER PRO ASP PRO LYS GLU SEQRES 20 B 302 GLY LEU ARG THR LEU ILE ASP PRO LYS LEU GLY GLU ASP SEQRES 21 B 302 TYR PRO ILE ASP SER ILE LEU LYS LEU THR GLN LEU ALA SEQRES 22 B 302 LYS VAL CYS THR GLN GLU ASP PRO LYS LEU ARG PRO SER SEQRES 23 B 302 MET ARG SER VAL VAL VAL ALA LEU MET THR LEU SER SER SEQRES 24 B 302 THR SER GLU HET ATP A 701 31 HET MG A 702 1 HET ATP B 701 31 HET MG B 702 1 HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE HETNAM MG MAGNESIUM ION FORMUL 3 ATP 2(C10 H16 N5 O13 P3) FORMUL 4 MG 2(MG 2+) FORMUL 7 HOH *134(H2 O) HELIX 1 AA1 SER A 313 THR A 321 1 9 HELIX 2 AA2 SER A 325 GLY A 327 5 3 HELIX 3 AA3 LEU A 365 HIS A 370 1 6 HELIX 4 AA4 ASN A 399 ARG A 405 1 7 HELIX 5 AA5 SER A 413 HIS A 434 1 22 HELIX 6 AA6 LYS A 445 ALA A 447 5 3 HELIX 7 AA7 PRO A 489 TYR A 495 1 7 HELIX 8 AA8 SER A 499 ALA A 517 1 19 HELIX 9 AA9 LEU A 534 ASN A 543 1 10 HELIX 10 AB1 ASP A 546 THR A 553 1 8 HELIX 11 AB2 LEU A 554 ILE A 555 5 2 HELIX 12 AB3 ASP A 556 GLY A 560 5 5 HELIX 13 AB4 PRO A 564 THR A 579 1 16 HELIX 14 AB5 ASP A 582 ARG A 586 5 5 HELIX 15 AB6 SER A 588 LEU A 599 1 12 HELIX 16 AB7 TYR B 314 THR B 321 1 8 HELIX 17 AB8 SER B 325 LYS B 329 5 5 HELIX 18 AB9 LYS B 366 VAL B 371 5 6 HELIX 19 AC1 ASN B 399 GLY B 406 1 8 HELIX 20 AC2 SER B 413 HIS B 434 1 22 HELIX 21 AC3 LYS B 445 ALA B 447 5 3 HELIX 22 AC4 PRO B 489 TYR B 495 1 7 HELIX 23 AC5 SER B 499 ALA B 517 1 19 HELIX 24 AC6 GLY B 533 SER B 544 1 12 HELIX 25 AC7 LYS B 548 ILE B 555 1 8 HELIX 26 AC8 PRO B 564 THR B 579 1 16 HELIX 27 AC9 ASP B 582 ARG B 586 5 5 HELIX 28 AD1 SER B 588 THR B 598 1 11 SHEET 1 AA1 6 VAL A 310 GLU A 311 0 SHEET 2 AA1 6 LEU A 379 CYS A 383 1 O TYR A 382 N VAL A 310 SHEET 3 AA1 6 LEU A 388 GLU A 393 -1 O PHE A 389 N CYS A 383 SHEET 4 AA1 6 GLU A 346 MET A 353 -1 N ARG A 351 O LEU A 390 SHEET 5 AA1 6 GLY A 336 LEU A 343 -1 N TYR A 339 O ILE A 350 SHEET 6 AA1 6 LYS A 329 GLN A 332 -1 N GLY A 331 O VAL A 338 SHEET 1 AA2 2 ILE A 449 ILE A 451 0 SHEET 2 AA2 2 ALA A 457 VAL A 459 -1 O LYS A 458 N LEU A 450 SHEET 1 AA3 2 ILE A 521 VAL A 522 0 SHEET 2 AA3 2 LYS A 532 GLY A 533 -1 O LYS A 532 N VAL A 522 SHEET 1 AA4 4 VAL B 338 LEU B 343 0 SHEET 2 AA4 4 GLU B 346 MET B 353 -1 O ILE B 350 N TYR B 339 SHEET 3 AA4 4 LEU B 388 GLU B 393 -1 O LEU B 390 N ARG B 351 SHEET 4 AA4 4 LEU B 379 CYS B 383 -1 N GLY B 381 O VAL B 391 SHEET 1 AA5 2 ILE B 449 ILE B 451 0 SHEET 2 AA5 2 ALA B 457 VAL B 459 -1 O LYS B 458 N LEU B 450 LINK OD1 ASN A 448 MG MG A 702 1555 1555 2.17 LINK OD2 ASP A 461 MG MG A 702 1555 1555 2.41 LINK O1G ATP A 701 MG MG A 702 1555 1555 2.13 LINK O2B ATP A 701 MG MG A 702 1555 1555 2.21 LINK O1A ATP A 701 MG MG A 702 1555 1555 2.74 LINK O2G ATP B 701 MG MG B 702 1555 1555 2.30 LINK MG MG B 702 O HOH B 830 1555 1555 2.11 CISPEP 1 VAL B 436 PRO B 437 0 -2.49 CRYST1 108.757 108.757 121.457 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009195 0.005309 0.000000 0.00000 SCALE2 0.000000 0.010617 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008233 0.00000 CONECT 1052 4139 CONECT 1159 4139 CONECT 4108 4109 4110 4111 4115 CONECT 4109 4108 4139 CONECT 4110 4108 CONECT 4111 4108 CONECT 4112 4113 4114 4115 4119 CONECT 4113 4112 CONECT 4114 4112 4139 CONECT 4115 4108 4112 CONECT 4116 4117 4118 4119 4120 CONECT 4117 4116 4139 CONECT 4118 4116 CONECT 4119 4112 4116 CONECT 4120 4116 4121 CONECT 4121 4120 4122 CONECT 4122 4121 4123 4124 CONECT 4123 4122 4128 CONECT 4124 4122 4125 4126 CONECT 4125 4124 CONECT 4126 4124 4127 4128 CONECT 4127 4126 CONECT 4128 4123 4126 4129 CONECT 4129 4128 4130 4138 CONECT 4130 4129 4131 CONECT 4131 4130 4132 CONECT 4132 4131 4133 4138 CONECT 4133 4132 4134 4135 CONECT 4134 4133 CONECT 4135 4133 4136 CONECT 4136 4135 4137 CONECT 4137 4136 4138 CONECT 4138 4129 4132 4137 CONECT 4139 1052 1159 4109 4114 CONECT 4139 4117 CONECT 4140 4141 4142 4143 4147 CONECT 4141 4140 CONECT 4142 4140 4171 CONECT 4143 4140 CONECT 4144 4145 4146 4147 4151 CONECT 4145 4144 CONECT 4146 4144 CONECT 4147 4140 4144 CONECT 4148 4149 4150 4151 4152 CONECT 4149 4148 CONECT 4150 4148 CONECT 4151 4144 4148 CONECT 4152 4148 4153 CONECT 4153 4152 4154 CONECT 4154 4153 4155 4156 CONECT 4155 4154 4160 CONECT 4156 4154 4157 4158 CONECT 4157 4156 CONECT 4158 4156 4159 4160 CONECT 4159 4158 CONECT 4160 4155 4158 4161 CONECT 4161 4160 4162 4170 CONECT 4162 4161 4163 CONECT 4163 4162 4164 CONECT 4164 4163 4165 4170 CONECT 4165 4164 4166 4167 CONECT 4166 4165 CONECT 4167 4165 4168 CONECT 4168 4167 4169 CONECT 4169 4168 4170 CONECT 4170 4161 4164 4169 CONECT 4171 4142 4298 CONECT 4298 4171 MASTER 426 0 4 28 16 0 0 6 4303 2 68 48 END