data_9X6B # _entry.id 9X6B # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.410 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9X6B pdb_00009x6b 10.2210/pdb9x6b/pdb WWPDB D_1300064555 ? ? EMDB EMD-66618 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2026-03-25 ? 2 'EM metadata' 1 0 2026-03-25 ? 3 'Additional map' 1 0 2026-03-25 1 4 'Half map' 1 0 2026-03-25 1 5 'Half map' 1 0 2026-03-25 2 6 Image 1 0 2026-03-25 ? 7 'Primary map' 1 0 2026-03-25 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? 3 3 'Additional map' repository 'Initial release' ? ? 4 4 'Half map' repository 'Initial release' ? ? 5 5 'Half map' repository 'Initial release' ? ? 6 6 Image repository 'Initial release' ? ? 7 7 'Primary map' repository 'Initial release' ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9X6B _pdbx_database_status.recvd_initial_deposition_date 2025-10-15 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBC _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB 'CRYSTAL STRUCTURE OF A SELF-SPLICING GROUP I INTRON WITH BOTH EXONS' 1U6B unspecified EMDB 'Cryo-EM structure of the Azoarcus sp. BH72 pre-tRNA(ILE) intron after second-step cyclization (circular form)' EMD-66618 'associated EM volume' # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 3 kmzhang@ustc.edu.cn Kaiming Zhang ? 'principal investigator/group leader' 0000-0003-0414-4776 4 lishanshan@ustc.edu.cn Shanshan Li ? 'principal investigator/group leader' 0000-0002-7041-5960 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Hong, Y.' 1 0009-0006-2926-7333 'Liu, J.S.' 2 0009-0005-5599-6372 'Zhang, K.' 3 0000-0003-0414-4776 'Li, S.' 4 0000-0002-7041-5960 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Pre-splicing conformation and stepwise circularization of a group I intron in Azoarcus pre-tRNA' _citation.year 2026 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-026-70747-y _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hong, Y.' 1 ? primary 'Liu, J.' 2 ? primary 'Zhang, X.' 3 ? primary 'Liu, J.' 4 ? primary 'Li, S.' 5 ? primary 'Zhang, K.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Azoarcus sp. BH72 self-splicing group I intron of tRNA-Ile' 65173.973 1 ? ? ? 'RNA (201-MER)' 2 non-polymer syn 'MAGNESIUM ION' 24.305 6 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;CGAUGUGCCUUGCGCCGGGAAACCACGCAAGGGAUGGUGUCAAAUUCGGCGAAACCUAAGCGCCCGCCCGGGCGUAUGGC AACGCCGAGCCAAGCUUCGGCGCCUGCGCCGAUGAAGGUGUAGAGACUAGACGGCACCCACCUAAGGCAAACGCUAUGGU GAAGGCAUAGUCCAGGGAGUGGCGAAAGUCACACAAACCGG ; _entity_poly.pdbx_seq_one_letter_code_can ;CGAUGUGCCUUGCGCCGGGAAACCACGCAAGGGAUGGUGUCAAAUUCGGCGAAACCUAAGCGCCCGCCCGGGCGUAUGGC AACGCCGAGCCAAGCUUCGGCGCCUGCGCCGAUGAAGGUGUAGAGACUAGACGGCACCCACCUAAGGCAAACGCUAUGGU GAAGGCAUAGUCCAGGGAGUGGCGAAAGUCACACAAACCGG ; _entity_poly.pdbx_strand_id B _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name 'MAGNESIUM ION' _pdbx_entity_nonpoly.comp_id MG # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 C n 1 2 G n 1 3 A n 1 4 U n 1 5 G n 1 6 U n 1 7 G n 1 8 C n 1 9 C n 1 10 U n 1 11 U n 1 12 G n 1 13 C n 1 14 G n 1 15 C n 1 16 C n 1 17 G n 1 18 G n 1 19 G n 1 20 A n 1 21 A n 1 22 A n 1 23 C n 1 24 C n 1 25 A n 1 26 C n 1 27 G n 1 28 C n 1 29 A n 1 30 A n 1 31 G n 1 32 G n 1 33 G n 1 34 A n 1 35 U n 1 36 G n 1 37 G n 1 38 U n 1 39 G n 1 40 U n 1 41 C n 1 42 A n 1 43 A n 1 44 A n 1 45 U n 1 46 U n 1 47 C n 1 48 G n 1 49 G n 1 50 C n 1 51 G n 1 52 A n 1 53 A n 1 54 A n 1 55 C n 1 56 C n 1 57 U n 1 58 A n 1 59 A n 1 60 G n 1 61 C n 1 62 G n 1 63 C n 1 64 C n 1 65 C n 1 66 G n 1 67 C n 1 68 C n 1 69 C n 1 70 G n 1 71 G n 1 72 G n 1 73 C n 1 74 G n 1 75 U n 1 76 A n 1 77 U n 1 78 G n 1 79 G n 1 80 C n 1 81 A n 1 82 A n 1 83 C n 1 84 G n 1 85 C n 1 86 C n 1 87 G n 1 88 A n 1 89 G n 1 90 C n 1 91 C n 1 92 A n 1 93 A n 1 94 G n 1 95 C n 1 96 U n 1 97 U n 1 98 C n 1 99 G n 1 100 G n 1 101 C n 1 102 G n 1 103 C n 1 104 C n 1 105 U n 1 106 G n 1 107 C n 1 108 G n 1 109 C n 1 110 C n 1 111 G n 1 112 A n 1 113 U n 1 114 G n 1 115 A n 1 116 A n 1 117 G n 1 118 G n 1 119 U n 1 120 G n 1 121 U n 1 122 A n 1 123 G n 1 124 A n 1 125 G n 1 126 A n 1 127 C n 1 128 U n 1 129 A n 1 130 G n 1 131 A n 1 132 C n 1 133 G n 1 134 G n 1 135 C n 1 136 A n 1 137 C n 1 138 C n 1 139 C n 1 140 A n 1 141 C n 1 142 C n 1 143 U n 1 144 A n 1 145 A n 1 146 G n 1 147 G n 1 148 C n 1 149 A n 1 150 A n 1 151 A n 1 152 C n 1 153 G n 1 154 C n 1 155 U n 1 156 A n 1 157 U n 1 158 G n 1 159 G n 1 160 U n 1 161 G n 1 162 A n 1 163 A n 1 164 G n 1 165 G n 1 166 C n 1 167 A n 1 168 U n 1 169 A n 1 170 G n 1 171 U n 1 172 C n 1 173 C n 1 174 A n 1 175 G n 1 176 G n 1 177 G n 1 178 A n 1 179 G n 1 180 U n 1 181 G n 1 182 G n 1 183 C n 1 184 G n 1 185 A n 1 186 A n 1 187 A n 1 188 G n 1 189 U n 1 190 C n 1 191 A n 1 192 C n 1 193 A n 1 194 C n 1 195 A n 1 196 A n 1 197 A n 1 198 C n 1 199 C n 1 200 G n 1 201 G n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 201 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Azoarcus olearius' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 418699 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'in vitro transcription vector pT7-Fluc(deltai)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 905932 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 C 1 5 5 C C B . n A 1 2 G 2 6 6 G G B . n A 1 3 A 3 7 7 A A B . n A 1 4 U 4 8 8 U U B . n A 1 5 G 5 9 9 G G B . n A 1 6 U 6 10 10 U U B . n A 1 7 G 7 11 11 G G B . n A 1 8 C 8 12 12 C C B . n A 1 9 C 9 13 13 C C B . n A 1 10 U 10 14 14 U U B . n A 1 11 U 11 15 15 U U B . n A 1 12 G 12 16 16 G G B . n A 1 13 C 13 17 17 C C B . n A 1 14 G 14 18 18 G G B . n A 1 15 C 15 19 19 C C B . n A 1 16 C 16 20 20 C C B . n A 1 17 G 17 21 21 G G B . n A 1 18 G 18 22 22 G G B . n A 1 19 G 19 23 23 G G B . n A 1 20 A 20 24 24 A A B . n A 1 21 A 21 25 25 A A B . n A 1 22 A 22 26 26 A A B . n A 1 23 C 23 27 27 C C B . n A 1 24 C 24 28 28 C C B . n A 1 25 A 25 29 29 A A B . n A 1 26 C 26 30 30 C C B . n A 1 27 G 27 31 31 G G B . n A 1 28 C 28 32 32 C C B . n A 1 29 A 29 33 33 A A B . n A 1 30 A 30 34 34 A A B . n A 1 31 G 31 35 35 G G B . n A 1 32 G 32 36 36 G G B . n A 1 33 G 33 37 37 G G B . n A 1 34 A 34 38 38 A A B . n A 1 35 U 35 39 39 U U B . n A 1 36 G 36 40 40 G G B . n A 1 37 G 37 41 41 G G B . n A 1 38 U 38 42 42 U U B . n A 1 39 G 39 43 43 G G B . n A 1 40 U 40 44 44 U U B . n A 1 41 C 41 45 45 C C B . n A 1 42 A 42 46 46 A A B . n A 1 43 A 43 47 47 A A B . n A 1 44 A 44 48 48 A A B . n A 1 45 U 45 49 49 U U B . n A 1 46 U 46 50 50 U U B . n A 1 47 C 47 51 51 C C B . n A 1 48 G 48 52 52 G G B . n A 1 49 G 49 53 53 G G B . n A 1 50 C 50 54 54 C C B . n A 1 51 G 51 55 55 G G B . n A 1 52 A 52 56 56 A A B . n A 1 53 A 53 57 57 A A B . n A 1 54 A 54 58 58 A A B . n A 1 55 C 55 59 59 C C B . n A 1 56 C 56 60 60 C C B . n A 1 57 U 57 61 61 U U B . n A 1 58 A 58 62 62 A A B . n A 1 59 A 59 63 63 A A B . n A 1 60 G 60 64 64 G G B . n A 1 61 C 61 65 65 C C B . n A 1 62 G 62 66 66 G G B . n A 1 63 C 63 67 67 C C B . n A 1 64 C 64 68 68 C C B . n A 1 65 C 65 69 69 C C B . n A 1 66 G 66 70 70 G G B . n A 1 67 C 67 71 71 C C B . n A 1 68 C 68 72 72 C C B . n A 1 69 C 69 73 73 C C B . n A 1 70 G 70 74 74 G G B . n A 1 71 G 71 75 75 G G B . n A 1 72 G 72 76 76 G G B . n A 1 73 C 73 77 77 C C B . n A 1 74 G 74 78 78 G G B . n A 1 75 U 75 79 79 U U B . n A 1 76 A 76 80 80 A A B . n A 1 77 U 77 81 81 U U B . n A 1 78 G 78 82 82 G G B . n A 1 79 G 79 83 83 G G B . n A 1 80 C 80 84 84 C C B . n A 1 81 A 81 85 85 A A B . n A 1 82 A 82 86 86 A A B . n A 1 83 C 83 87 87 C C B . n A 1 84 G 84 88 88 G G B . n A 1 85 C 85 89 89 C C B . n A 1 86 C 86 90 90 C C B . n A 1 87 G 87 91 91 G G B . n A 1 88 A 88 92 92 A A B . n A 1 89 G 89 93 93 G G B . n A 1 90 C 90 94 94 C C B . n A 1 91 C 91 95 95 C C B . n A 1 92 A 92 96 96 A A B . n A 1 93 A 93 97 97 A A B . n A 1 94 G 94 98 98 G G B . n A 1 95 C 95 99 99 C C B . n A 1 96 U 96 100 100 U U B . n A 1 97 U 97 101 101 U U B . n A 1 98 C 98 102 102 C C B . n A 1 99 G 99 103 103 G G B . n A 1 100 G 100 104 104 G G B . n A 1 101 C 101 105 105 C C B . n A 1 102 G 102 106 106 G G B . n A 1 103 C 103 107 107 C C B . n A 1 104 C 104 108 108 C C B . n A 1 105 U 105 109 109 U U B . n A 1 106 G 106 110 110 G G B . n A 1 107 C 107 111 111 C C B . n A 1 108 G 108 112 112 G G B . n A 1 109 C 109 113 113 C C B . n A 1 110 C 110 114 114 C C B . n A 1 111 G 111 115 115 G G B . n A 1 112 A 112 116 116 A A B . n A 1 113 U 113 117 117 U U B . n A 1 114 G 114 118 118 G G B . n A 1 115 A 115 119 119 A A B . n A 1 116 A 116 120 120 A A B . n A 1 117 G 117 121 121 G G B . n A 1 118 G 118 122 122 G G B . n A 1 119 U 119 123 123 U U B . n A 1 120 G 120 124 124 G G B . n A 1 121 U 121 125 125 U U B . n A 1 122 A 122 126 126 A A B . n A 1 123 G 123 127 127 G G B . n A 1 124 A 124 128 128 A A B . n A 1 125 G 125 129 129 G G B . n A 1 126 A 126 130 130 A A B . n A 1 127 C 127 131 131 C C B . n A 1 128 U 128 132 132 U U B . n A 1 129 A 129 133 133 A A B . n A 1 130 G 130 134 134 G G B . n A 1 131 A 131 135 135 A A B . n A 1 132 C 132 136 136 C C B . n A 1 133 G 133 137 137 G G B . n A 1 134 G 134 138 138 G G B . n A 1 135 C 135 139 139 C C B . n A 1 136 A 136 140 140 A A B . n A 1 137 C 137 141 141 C C B . n A 1 138 C 138 142 142 C C B . n A 1 139 C 139 143 143 C C B . n A 1 140 A 140 144 144 A A B . n A 1 141 C 141 145 145 C C B . n A 1 142 C 142 146 146 C C B . n A 1 143 U 143 147 147 U U B . n A 1 144 A 144 148 148 A A B . n A 1 145 A 145 149 149 A A B . n A 1 146 G 146 150 150 G G B . n A 1 147 G 147 151 151 G G B . n A 1 148 C 148 152 152 C C B . n A 1 149 A 149 153 153 A A B . n A 1 150 A 150 154 154 A A B . n A 1 151 A 151 155 155 A A B . n A 1 152 C 152 156 156 C C B . n A 1 153 G 153 157 157 G G B . n A 1 154 C 154 158 158 C C B . n A 1 155 U 155 159 159 U U B . n A 1 156 A 156 160 160 A A B . n A 1 157 U 157 161 161 U U B . n A 1 158 G 158 162 162 G G B . n A 1 159 G 159 163 163 G G B . n A 1 160 U 160 164 164 U U B . n A 1 161 G 161 165 165 G G B . n A 1 162 A 162 166 166 A A B . n A 1 163 A 163 167 167 A A B . n A 1 164 G 164 168 168 G G B . n A 1 165 G 165 169 169 G G B . n A 1 166 C 166 170 170 C C B . n A 1 167 A 167 171 171 A A B . n A 1 168 U 168 172 172 U U B . n A 1 169 A 169 173 173 A A B . n A 1 170 G 170 174 174 G G B . n A 1 171 U 171 175 175 U U B . n A 1 172 C 172 176 176 C C B . n A 1 173 C 173 177 177 C C B . n A 1 174 A 174 178 178 A A B . n A 1 175 G 175 179 179 G G B . n A 1 176 G 176 180 180 G G B . n A 1 177 G 177 181 181 G G B . n A 1 178 A 178 182 182 A A B . n A 1 179 G 179 183 183 G G B . n A 1 180 U 180 184 184 U U B . n A 1 181 G 181 185 185 G G B . n A 1 182 G 182 186 186 G G B . n A 1 183 C 183 187 187 C C B . n A 1 184 G 184 188 188 G G B . n A 1 185 A 185 189 189 A A B . n A 1 186 A 186 190 190 A A B . n A 1 187 A 187 191 191 A A B . n A 1 188 G 188 192 192 G G B . n A 1 189 U 189 193 193 U U B . n A 1 190 C 190 194 194 C C B . n A 1 191 A 191 195 195 A A B . n A 1 192 C 192 196 196 C C B . n A 1 193 A 193 197 197 A A B . n A 1 194 C 194 198 198 C C B . n A 1 195 A 195 199 199 A A B . n A 1 196 A 196 200 200 A A B . n A 1 197 A 197 201 201 A A B . n A 1 198 C 198 202 202 C C B . n A 1 199 C 199 203 203 C C B . n A 1 200 G 200 204 204 G G B . n A 1 201 G 201 205 205 G G B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 301 1 MG MG B . C 2 MG 1 302 2 MG MG B . D 2 MG 1 303 3 MG MG B . E 2 MG 1 304 4 MG MG B . F 2 MG 1 305 5 MG MG B . G 2 MG 1 306 6 MG MG B . # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9X6B _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9X6B _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9X6B _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 9X6B _struct.title 'Cryo-EM structure of the Azoarcus sp. BH72 pre-tRNA(ILE) intron after second-step cyclization (circular form)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9X6B _struct_keywords.text ;Azoarcus sp. BH72 pre-tRNA(ILE); second-step cyclization; c' intron, RNA ; _struct_keywords.pdbx_keywords RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? # _struct_ref.id 1 _struct_ref.db_name GB _struct_ref.db_code DQ103524.1 _struct_ref.pdbx_db_accession 70997234 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;CGAUGUGCCUUGCGCCGGGAAACCACGCAAGGGAUGGUGUCAAAUUCGGCGAAACCUAAGCGCCCGCCCGGGCGUAUGGC AACGCCGAGCCAAGCUUCGGCGCCUGCGCCGAUGAAGGUGUAGAGACUAGACGGCACCCACCUAAGGCAAACGCUAUGGU GAAGGCAUAGUCCAGGGAGUGGCGAAAGUCACACAAACCGG ; _struct_ref.pdbx_align_begin 5 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 9X6B _struct_ref_seq.pdbx_strand_id B _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 201 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 70997234 _struct_ref_seq.db_align_beg 5 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 205 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 5 _struct_ref_seq.pdbx_auth_seq_align_end 205 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A A 82 OP2 ? ? ? 1_555 C MG . MG ? ? B A 86 B MG 302 1_555 ? ? ? ? ? ? ? 2.481 ? ? metalc2 metalc ? ? A C 83 OP1 ? ? ? 1_555 B MG . MG ? ? B C 87 B MG 301 1_555 ? ? ? ? ? ? ? 2.925 ? ? metalc3 metalc ? ? A U 119 OP1 ? ? ? 1_555 E MG . MG ? ? B U 123 B MG 304 1_555 ? ? ? ? ? ? ? 2.565 ? ? metalc4 metalc ? ? A G 123 OP2 ? ? ? 1_555 C MG . MG ? ? B G 127 B MG 302 1_555 ? ? ? ? ? ? ? 2.376 ? ? metalc5 metalc ? ? A G 123 OP1 ? ? ? 1_555 G MG . MG ? ? B G 127 B MG 306 1_555 ? ? ? ? ? ? ? 2.357 ? ? metalc6 metalc ? ? A G 165 OP1 ? ? ? 1_555 B MG . MG ? ? B G 169 B MG 301 1_555 ? ? ? ? ? ? ? 2.271 ? ? metalc7 metalc ? ? A C 166 OP1 ? ? ? 1_555 F MG . MG ? ? B C 170 B MG 305 1_555 ? ? ? ? ? ? ? 2.400 ? ? metalc8 metalc ? ? A A 167 OP1 ? ? ? 1_555 B MG . MG ? ? B A 171 B MG 301 1_555 ? ? ? ? ? ? ? 2.345 ? ? metalc9 metalc ? ? A A 167 OP2 ? ? ? 1_555 G MG . MG ? ? B A 171 B MG 306 1_555 ? ? ? ? ? ? ? 2.277 ? ? metalc10 metalc ? ? A U 168 OP2 ? ? ? 1_555 D MG . MG ? ? B U 172 B MG 303 1_555 ? ? ? ? ? ? ? 2.564 ? ? metalc11 metalc ? ? A A 169 OP2 ? ? ? 1_555 D MG . MG ? ? B A 173 B MG 303 1_555 ? ? ? ? ? ? ? 2.600 ? ? metalc12 metalc ? ? A G 201 "O2'" ? ? ? 1_555 G MG . MG ? ? B G 205 B MG 306 1_555 ? ? ? ? ? ? ? 1.967 ? ? hydrog1 hydrog ? ? A G 5 N2 ? ? ? 1_555 A A 82 N3 ? ? B G 9 B A 86 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog2 hydrog ? ? A C 8 N3 ? ? ? 1_555 A G 32 N1 ? ? B C 12 B G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A C 8 N4 ? ? ? 1_555 A G 32 O6 ? ? B C 12 B G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A C 8 O2 ? ? ? 1_555 A G 32 N2 ? ? B C 12 B G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A C 9 N3 ? ? ? 1_555 A G 31 N1 ? ? B C 13 B G 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A C 9 N4 ? ? ? 1_555 A G 31 O6 ? ? B C 13 B G 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 9 O2 ? ? ? 1_555 A G 31 N2 ? ? B C 13 B G 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A U 10 N3 ? ? ? 1_555 A A 30 N1 ? ? B U 14 B A 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A U 10 O4 ? ? ? 1_555 A A 30 N6 ? ? B U 14 B A 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A U 11 N3 ? ? ? 1_555 A A 29 N1 ? ? B U 15 B A 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A U 11 O4 ? ? ? 1_555 A A 29 N6 ? ? B U 15 B A 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A G 12 N1 ? ? ? 1_555 A C 28 N3 ? ? B G 16 B C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A G 12 N2 ? ? ? 1_555 A C 28 O2 ? ? B G 16 B C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A G 12 O6 ? ? ? 1_555 A C 28 N4 ? ? B G 16 B C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A C 13 N3 ? ? ? 1_555 A G 27 N1 ? ? B C 17 B G 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A C 13 N4 ? ? ? 1_555 A G 27 O6 ? ? B C 17 B G 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A C 13 O2 ? ? ? 1_555 A G 27 N2 ? ? B C 17 B G 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A G 14 N1 ? ? ? 1_555 A C 26 N3 ? ? B G 18 B C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A G 14 N2 ? ? ? 1_555 A C 26 O2 ? ? B G 18 B C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A G 14 O6 ? ? ? 1_555 A C 26 N4 ? ? B G 18 B C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A G 17 N1 ? ? ? 1_555 A C 24 N3 ? ? B G 21 B C 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A G 17 N2 ? ? ? 1_555 A C 24 O2 ? ? B G 21 B C 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A G 17 O6 ? ? ? 1_555 A C 24 N4 ? ? B G 21 B C 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A G 18 N1 ? ? ? 1_555 A C 23 N3 ? ? B G 22 B C 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A G 18 N2 ? ? ? 1_555 A C 23 O2 ? ? B G 22 B C 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A G 18 O6 ? ? ? 1_555 A C 23 N4 ? ? B G 22 B C 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A G 19 N2 ? ? ? 1_555 A A 22 N7 ? ? B G 23 B A 26 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog28 hydrog ? ? A A 20 N1 ? ? ? 1_555 A A 156 N6 ? ? B A 24 B A 160 1_555 ? ? ? ? ? ? TYPE_1_PAIR ? ? ? hydrog29 hydrog ? ? A A 20 N6 ? ? ? 1_555 A A 156 N1 ? ? B A 24 B A 160 1_555 ? ? ? ? ? ? TYPE_1_PAIR ? ? ? hydrog30 hydrog ? ? A A 22 N3 ? ? ? 1_555 A G 158 N2 ? ? B A 26 B G 162 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog31 hydrog ? ? A G 36 N1 ? ? ? 1_555 A C 138 N3 ? ? B G 40 B C 142 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A G 36 N2 ? ? ? 1_555 A C 138 O2 ? ? B G 40 B C 142 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A G 36 O6 ? ? ? 1_555 A C 138 N4 ? ? B G 40 B C 142 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A G 37 N1 ? ? ? 1_555 A C 137 N3 ? ? B G 41 B C 141 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A G 37 N2 ? ? ? 1_555 A C 137 O2 ? ? B G 41 B C 141 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A G 37 O6 ? ? ? 1_555 A C 137 N4 ? ? B G 41 B C 141 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A U 38 N3 ? ? ? 1_555 A A 136 N1 ? ? B U 42 B A 140 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A U 38 O4 ? ? ? 1_555 A A 136 N6 ? ? B U 42 B A 140 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A G 39 N1 ? ? ? 1_555 A C 135 N3 ? ? B G 43 B C 139 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A G 39 N2 ? ? ? 1_555 A C 135 O2 ? ? B G 43 B C 139 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A G 39 O6 ? ? ? 1_555 A C 135 N4 ? ? B G 43 B C 139 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A U 40 N3 ? ? ? 1_555 A G 134 O6 ? ? B U 44 B G 138 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog43 hydrog ? ? A U 40 O2 ? ? ? 1_555 A G 134 N1 ? ? B U 44 B G 138 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog44 hydrog ? ? A C 41 N3 ? ? ? 1_555 A G 133 N1 ? ? B C 45 B G 137 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A C 41 N4 ? ? ? 1_555 A G 133 O6 ? ? B C 45 B G 137 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A C 41 O2 ? ? ? 1_555 A G 133 N2 ? ? B C 45 B G 137 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A A 42 N1 ? ? ? 1_555 A A 131 N6 ? ? B A 46 B A 135 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog48 hydrog ? ? A A 42 N6 ? ? ? 1_555 A A 131 N7 ? ? B A 46 B A 135 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog49 hydrog ? ? A A 44 N3 ? ? ? 1_555 A G 118 N2 ? ? B A 48 B G 122 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog50 hydrog ? ? A U 46 N3 ? ? ? 1_555 A A 88 N1 ? ? B U 50 B A 92 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A U 46 O4 ? ? ? 1_555 A A 88 N6 ? ? B U 50 B A 92 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A C 47 N3 ? ? ? 1_555 A G 87 N1 ? ? B C 51 B G 91 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A C 47 N4 ? ? ? 1_555 A G 87 O6 ? ? B C 51 B G 91 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A C 47 O2 ? ? ? 1_555 A G 87 N2 ? ? B C 51 B G 91 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A G 48 N1 ? ? ? 1_555 A C 86 N3 ? ? B G 52 B C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A G 48 N2 ? ? ? 1_555 A C 86 O2 ? ? B G 52 B C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A G 48 O6 ? ? ? 1_555 A C 86 N4 ? ? B G 52 B C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A G 49 N1 ? ? ? 1_555 A C 85 N3 ? ? B G 53 B C 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A G 49 N2 ? ? ? 1_555 A C 85 O2 ? ? B G 53 B C 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A G 49 O6 ? ? ? 1_555 A C 85 N4 ? ? B G 53 B C 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A C 50 N3 ? ? ? 1_555 A G 84 N1 ? ? B C 54 B G 88 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? A C 50 N4 ? ? ? 1_555 A G 84 O6 ? ? B C 54 B G 88 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A C 50 O2 ? ? ? 1_555 A G 84 N2 ? ? B C 54 B G 88 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A G 51 N1 ? ? ? 1_555 A C 83 N3 ? ? B G 55 B C 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? A G 51 N2 ? ? ? 1_555 A C 83 O2 ? ? B G 55 B C 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? A G 51 O6 ? ? ? 1_555 A C 83 N4 ? ? B G 55 B C 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? A A 52 N3 ? ? ? 1_555 A A 82 N6 ? ? B A 56 B A 86 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog68 hydrog ? ? A A 53 N6 ? ? ? 1_555 A A 81 N3 ? ? B A 57 B A 85 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog69 hydrog ? ? A A 54 N6 ? ? ? 1_555 A C 80 O2 ? ? B A 58 B C 84 1_555 ? ? ? ? ? ? 'A-C MISPAIR' ? ? ? hydrog70 hydrog ? ? A C 55 N3 ? ? ? 1_555 A G 79 N1 ? ? B C 59 B G 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? A C 55 N4 ? ? ? 1_555 A G 79 O6 ? ? B C 59 B G 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? A C 55 O2 ? ? ? 1_555 A G 79 N2 ? ? B C 59 B G 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? A C 56 N3 ? ? ? 1_555 A G 78 N1 ? ? B C 60 B G 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? A C 56 N4 ? ? ? 1_555 A G 78 O6 ? ? B C 60 B G 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? A C 56 O2 ? ? ? 1_555 A G 78 N2 ? ? B C 60 B G 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? A U 57 N3 ? ? ? 1_555 A A 76 N7 ? ? B U 61 B A 80 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog77 hydrog ? ? A U 57 O2 ? ? ? 1_555 A A 76 N6 ? ? B U 61 B A 80 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog78 hydrog ? ? A A 59 N1 ? ? ? 1_555 A U 77 N3 ? ? B A 63 B U 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? A A 59 N6 ? ? ? 1_555 A U 77 O4 ? ? B A 63 B U 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? A G 60 N1 ? ? ? 1_555 A U 75 O2 ? ? B G 64 B U 79 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog81 hydrog ? ? A G 60 O6 ? ? ? 1_555 A U 75 N3 ? ? B G 64 B U 79 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog82 hydrog ? ? A G 60 N2 ? ? ? 1_555 A U 77 O4 ? ? B G 64 B U 81 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog83 hydrog ? ? A C 61 N3 ? ? ? 1_555 A G 74 N1 ? ? B C 65 B G 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? A C 61 N4 ? ? ? 1_555 A G 74 O6 ? ? B C 65 B G 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? A C 61 O2 ? ? ? 1_555 A G 74 N2 ? ? B C 65 B G 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? A G 62 N1 ? ? ? 1_555 A C 73 N3 ? ? B G 66 B C 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? A G 62 N2 ? ? ? 1_555 A C 73 O2 ? ? B G 66 B C 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? A G 62 O6 ? ? ? 1_555 A C 73 N4 ? ? B G 66 B C 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? A C 63 N3 ? ? ? 1_555 A G 72 N1 ? ? B C 67 B G 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog90 hydrog ? ? A C 63 N4 ? ? ? 1_555 A G 72 O6 ? ? B C 67 B G 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? A C 63 O2 ? ? ? 1_555 A G 72 N2 ? ? B C 67 B G 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? A C 64 N3 ? ? ? 1_555 A G 71 N1 ? ? B C 68 B G 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? A C 64 N4 ? ? ? 1_555 A G 71 O6 ? ? B C 68 B G 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog94 hydrog ? ? A C 64 O2 ? ? ? 1_555 A G 71 N2 ? ? B C 68 B G 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog95 hydrog ? ? A C 65 N3 ? ? ? 1_555 A G 70 N1 ? ? B C 69 B G 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog96 hydrog ? ? A C 65 N4 ? ? ? 1_555 A G 70 O6 ? ? B C 69 B G 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog97 hydrog ? ? A C 65 O2 ? ? ? 1_555 A G 70 N2 ? ? B C 69 B G 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog98 hydrog ? ? A G 66 N1 ? ? ? 1_555 A C 68 O2 ? ? B G 70 B C 72 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog99 hydrog ? ? A A 76 N1 ? ? ? 1_555 A A 185 N6 ? ? B A 80 B A 189 1_555 ? ? ? ? ? ? TYPE_1_PAIR ? ? ? hydrog100 hydrog ? ? A A 76 N6 ? ? ? 1_555 A A 185 N1 ? ? B A 80 B A 189 1_555 ? ? ? ? ? ? TYPE_1_PAIR ? ? ? hydrog101 hydrog ? ? A G 78 N2 ? ? ? 1_555 A A 187 N3 ? ? B G 82 B A 191 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog102 hydrog ? ? A G 84 N7 ? ? ? 1_555 A C 166 N4 ? ? B G 88 B C 170 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog103 hydrog ? ? A C 86 N4 ? ? ? 1_555 A U 121 O4 ? ? B C 90 B U 125 1_555 ? ? ? ? ? ? 'C-U MISPAIR' ? ? ? hydrog104 hydrog ? ? A G 87 O6 ? ? ? 1_555 A G 120 N2 ? ? B G 91 B G 124 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog105 hydrog ? ? A A 88 N6 ? ? ? 1_555 A G 120 N3 ? ? B A 92 B G 124 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog106 hydrog ? ? A G 89 N1 ? ? ? 1_555 A U 119 O2 ? ? B G 93 B U 123 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog107 hydrog ? ? A G 89 O6 ? ? ? 1_555 A U 119 N3 ? ? B G 93 B U 123 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog108 hydrog ? ? A C 90 N3 ? ? ? 1_555 A G 118 N1 ? ? B C 94 B G 122 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog109 hydrog ? ? A C 90 N4 ? ? ? 1_555 A G 118 O6 ? ? B C 94 B G 122 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog110 hydrog ? ? A C 90 O2 ? ? ? 1_555 A G 118 N2 ? ? B C 94 B G 122 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog111 hydrog ? ? A C 91 N3 ? ? ? 1_555 A G 117 N1 ? ? B C 95 B G 121 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog112 hydrog ? ? A C 91 N4 ? ? ? 1_555 A G 117 O6 ? ? B C 95 B G 121 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog113 hydrog ? ? A C 91 O2 ? ? ? 1_555 A G 117 N2 ? ? B C 95 B G 121 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog114 hydrog ? ? A A 93 N6 ? ? ? 1_555 A A 116 N1 ? ? B A 97 B A 120 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog115 hydrog ? ? A A 93 N3 ? ? ? 1_555 A G 134 N2 ? ? B A 97 B G 138 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog116 hydrog ? ? A G 94 N1 ? ? ? 1_555 A A 115 N1 ? ? B G 98 B A 119 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog117 hydrog ? ? A G 94 O6 ? ? ? 1_555 A A 115 N6 ? ? B G 98 B A 119 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog118 hydrog ? ? A C 95 N3 ? ? ? 1_555 A G 114 N1 ? ? B C 99 B G 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog119 hydrog ? ? A C 95 N4 ? ? ? 1_555 A G 114 O6 ? ? B C 99 B G 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog120 hydrog ? ? A C 95 O2 ? ? ? 1_555 A G 114 N2 ? ? B C 99 B G 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog121 hydrog ? ? A U 96 N3 ? ? ? 1_555 A U 113 O2 ? ? B U 100 B U 117 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog122 hydrog ? ? A U 96 O4 ? ? ? 1_555 A U 113 N3 ? ? B U 100 B U 117 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog123 hydrog ? ? A U 97 N3 ? ? ? 1_555 A A 112 N1 ? ? B U 101 B A 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog124 hydrog ? ? A U 97 O4 ? ? ? 1_555 A A 112 N6 ? ? B U 101 B A 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog125 hydrog ? ? A C 98 N3 ? ? ? 1_555 A G 111 N1 ? ? B C 102 B G 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog126 hydrog ? ? A C 98 N4 ? ? ? 1_555 A G 111 O6 ? ? B C 102 B G 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog127 hydrog ? ? A C 98 O2 ? ? ? 1_555 A G 111 N2 ? ? B C 102 B G 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog128 hydrog ? ? A G 99 N1 ? ? ? 1_555 A C 110 N3 ? ? B G 103 B C 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog129 hydrog ? ? A G 99 N2 ? ? ? 1_555 A C 110 O2 ? ? B G 103 B C 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog130 hydrog ? ? A G 99 O6 ? ? ? 1_555 A C 110 N4 ? ? B G 103 B C 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog131 hydrog ? ? A G 100 N1 ? ? ? 1_555 A C 109 N3 ? ? B G 104 B C 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog132 hydrog ? ? A G 100 N2 ? ? ? 1_555 A C 109 O2 ? ? B G 104 B C 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog133 hydrog ? ? A G 100 O6 ? ? ? 1_555 A C 109 N4 ? ? B G 104 B C 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog134 hydrog ? ? A C 101 N3 ? ? ? 1_555 A G 108 N1 ? ? B C 105 B G 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog135 hydrog ? ? A C 101 N4 ? ? ? 1_555 A G 108 O6 ? ? B C 105 B G 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog136 hydrog ? ? A C 101 O2 ? ? ? 1_555 A G 108 N2 ? ? B C 105 B G 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog137 hydrog ? ? A G 102 N1 ? ? ? 1_555 A C 107 N3 ? ? B G 106 B C 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog138 hydrog ? ? A G 102 N2 ? ? ? 1_555 A C 107 O2 ? ? B G 106 B C 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog139 hydrog ? ? A G 102 O6 ? ? ? 1_555 A C 107 N4 ? ? B G 106 B C 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog140 hydrog ? ? A C 103 N3 ? ? ? 1_555 A G 106 N1 ? ? B C 107 B G 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog141 hydrog ? ? A C 103 N4 ? ? ? 1_555 A G 106 O6 ? ? B C 107 B G 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog142 hydrog ? ? A C 103 O2 ? ? ? 1_555 A G 106 N2 ? ? B C 107 B G 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog143 hydrog ? ? A C 104 O2 ? ? ? 1_555 A G 106 N1 ? ? B C 108 B G 110 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog144 hydrog ? ? A A 122 N6 ? ? ? 1_555 A A 126 N7 ? ? B A 126 B A 130 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog145 hydrog ? ? A G 123 N1 ? ? ? 1_555 A C 173 N3 ? ? B G 127 B C 177 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog146 hydrog ? ? A G 123 N2 ? ? ? 1_555 A C 173 O2 ? ? B G 127 B C 177 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog147 hydrog ? ? A G 123 O6 ? ? ? 1_555 A C 173 N4 ? ? B G 127 B C 177 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog148 hydrog ? ? A A 124 N6 ? ? ? 1_555 A C 173 O2 ? ? B A 128 B C 177 1_555 ? ? ? ? ? ? 'A-C MISPAIR' ? ? ? hydrog149 hydrog ? ? A G 125 N1 ? ? ? 1_555 A C 172 N3 ? ? B G 129 B C 176 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog150 hydrog ? ? A G 125 N2 ? ? ? 1_555 A C 172 O2 ? ? B G 129 B C 176 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog151 hydrog ? ? A G 125 O6 ? ? ? 1_555 A C 172 N4 ? ? B G 129 B C 176 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog152 hydrog ? ? A G 125 N7 ? ? ? 1_555 A G 201 N2 ? ? B G 129 B G 205 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog153 hydrog ? ? A G 125 O6 ? ? ? 1_555 A G 201 N1 ? ? B G 129 B G 205 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog154 hydrog ? ? A A 126 N1 ? ? ? 1_555 A U 171 N3 ? ? B A 130 B U 175 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog155 hydrog ? ? A A 126 N6 ? ? ? 1_555 A U 171 O4 ? ? B A 130 B U 175 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog156 hydrog ? ? A C 127 N4 ? ? ? 1_555 A A 167 N1 ? ? B C 131 B A 171 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog157 hydrog ? ? A C 127 N3 ? ? ? 1_555 A G 170 N1 ? ? B C 131 B G 174 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog158 hydrog ? ? A C 127 N4 ? ? ? 1_555 A G 170 O6 ? ? B C 131 B G 174 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog159 hydrog ? ? A C 127 O2 ? ? ? 1_555 A G 170 N2 ? ? B C 131 B G 174 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog160 hydrog ? ? A U 128 N3 ? ? ? 1_555 A A 169 N1 ? ? B U 132 B A 173 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog161 hydrog ? ? A U 128 O4 ? ? ? 1_555 A A 169 N6 ? ? B U 132 B A 173 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog162 hydrog ? ? A A 129 N1 ? ? ? 1_555 A U 168 N3 ? ? B A 133 B U 172 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog163 hydrog ? ? A A 129 N6 ? ? ? 1_555 A U 168 O4 ? ? B A 133 B U 172 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog164 hydrog ? ? A G 130 N7 ? ? ? 1_555 A G 165 N1 ? ? B G 134 B G 169 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog165 hydrog ? ? A G 130 O6 ? ? ? 1_555 A G 165 N2 ? ? B G 134 B G 169 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog166 hydrog ? ? A C 139 N3 ? ? ? 1_555 A G 161 N1 ? ? B C 143 B G 165 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog167 hydrog ? ? A C 139 N4 ? ? ? 1_555 A G 161 O6 ? ? B C 143 B G 165 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog168 hydrog ? ? A C 139 O2 ? ? ? 1_555 A G 161 N2 ? ? B C 143 B G 165 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog169 hydrog ? ? A A 140 N1 ? ? ? 1_555 A U 160 N3 ? ? B A 144 B U 164 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog170 hydrog ? ? A A 140 N6 ? ? ? 1_555 A U 160 O4 ? ? B A 144 B U 164 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog171 hydrog ? ? A C 141 N3 ? ? ? 1_555 A G 159 N1 ? ? B C 145 B G 163 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog172 hydrog ? ? A C 141 N4 ? ? ? 1_555 A G 159 O6 ? ? B C 145 B G 163 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog173 hydrog ? ? A C 141 O2 ? ? ? 1_555 A G 159 N2 ? ? B C 145 B G 163 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog174 hydrog ? ? A C 142 N3 ? ? ? 1_555 A G 158 N1 ? ? B C 146 B G 162 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog175 hydrog ? ? A C 142 N4 ? ? ? 1_555 A G 158 O6 ? ? B C 146 B G 162 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog176 hydrog ? ? A C 142 O2 ? ? ? 1_555 A G 158 N2 ? ? B C 146 B G 162 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog177 hydrog ? ? A U 143 N3 ? ? ? 1_555 A A 156 N7 ? ? B U 147 B A 160 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog178 hydrog ? ? A U 143 O2 ? ? ? 1_555 A A 156 N6 ? ? B U 147 B A 160 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog179 hydrog ? ? A A 145 N1 ? ? ? 1_555 A U 157 N3 ? ? B A 149 B U 161 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog180 hydrog ? ? A A 145 N6 ? ? ? 1_555 A U 157 O4 ? ? B A 149 B U 161 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog181 hydrog ? ? A G 146 N1 ? ? ? 1_555 A U 155 O2 ? ? B G 150 B U 159 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog182 hydrog ? ? A G 146 O6 ? ? ? 1_555 A U 155 N3 ? ? B G 150 B U 159 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog183 hydrog ? ? A G 146 N1 ? ? ? 1_555 A U 157 O4 ? ? B G 150 B U 161 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog184 hydrog ? ? A G 147 N1 ? ? ? 1_555 A C 154 N3 ? ? B G 151 B C 158 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog185 hydrog ? ? A G 147 N2 ? ? ? 1_555 A C 154 O2 ? ? B G 151 B C 158 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog186 hydrog ? ? A G 147 O6 ? ? ? 1_555 A C 154 N4 ? ? B G 151 B C 158 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog187 hydrog ? ? A C 148 N3 ? ? ? 1_555 A G 153 N1 ? ? B C 152 B G 157 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog188 hydrog ? ? A C 148 N4 ? ? ? 1_555 A G 153 O6 ? ? B C 152 B G 157 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog189 hydrog ? ? A C 148 O2 ? ? ? 1_555 A G 153 N2 ? ? B C 152 B G 157 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog190 hydrog ? ? A C 172 N4 ? ? ? 1_555 A G 201 O6 ? ? B C 176 B G 205 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog191 hydrog ? ? A G 175 N1 ? ? ? 1_555 A C 199 N3 ? ? B G 179 B C 203 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog192 hydrog ? ? A G 175 N2 ? ? ? 1_555 A C 199 O2 ? ? B G 179 B C 203 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog193 hydrog ? ? A G 175 O6 ? ? ? 1_555 A C 199 N4 ? ? B G 179 B C 203 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog194 hydrog ? ? A G 176 N1 ? ? ? 1_555 A C 198 N3 ? ? B G 180 B C 202 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog195 hydrog ? ? A G 176 N2 ? ? ? 1_555 A C 198 O2 ? ? B G 180 B C 202 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog196 hydrog ? ? A G 176 O6 ? ? ? 1_555 A C 198 N4 ? ? B G 180 B C 202 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog197 hydrog ? ? A G 177 N2 ? ? ? 1_555 A A 197 N7 ? ? B G 181 B A 201 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog198 hydrog ? ? A G 177 N3 ? ? ? 1_555 A A 197 N6 ? ? B G 181 B A 201 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog199 hydrog ? ? A A 178 N6 ? ? ? 1_555 A A 196 N7 ? ? B A 182 B A 200 1_555 ? ? ? ? ? ? TYPE_2_PAIR ? ? ? hydrog200 hydrog ? ? A A 178 N7 ? ? ? 1_555 A A 196 N6 ? ? B A 182 B A 200 1_555 ? ? ? ? ? ? TYPE_2_PAIR ? ? ? hydrog201 hydrog ? ? A G 179 N1 ? ? ? 1_555 A C 192 N3 ? ? B G 183 B C 196 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog202 hydrog ? ? A G 179 N2 ? ? ? 1_555 A C 192 O2 ? ? B G 183 B C 196 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog203 hydrog ? ? A G 179 O6 ? ? ? 1_555 A C 192 N4 ? ? B G 183 B C 196 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog204 hydrog ? ? A U 180 N3 ? ? ? 1_555 A A 191 N1 ? ? B U 184 B A 195 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog205 hydrog ? ? A U 180 O4 ? ? ? 1_555 A A 191 N6 ? ? B U 184 B A 195 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog206 hydrog ? ? A G 181 N1 ? ? ? 1_555 A C 190 N3 ? ? B G 185 B C 194 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog207 hydrog ? ? A G 181 N2 ? ? ? 1_555 A C 190 O2 ? ? B G 185 B C 194 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog208 hydrog ? ? A G 181 O6 ? ? ? 1_555 A C 190 N4 ? ? B G 185 B C 194 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog209 hydrog ? ? A G 182 N1 ? ? ? 1_555 A U 189 O2 ? ? B G 186 B U 193 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog210 hydrog ? ? A G 182 O6 ? ? ? 1_555 A U 189 N3 ? ? B G 186 B U 193 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog211 hydrog ? ? A C 183 N3 ? ? ? 1_555 A G 188 N1 ? ? B C 187 B G 192 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog212 hydrog ? ? A C 183 N4 ? ? ? 1_555 A G 188 O6 ? ? B C 187 B G 192 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog213 hydrog ? ? A C 183 O2 ? ? ? 1_555 A G 188 N2 ? ? B C 187 B G 192 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog214 hydrog ? ? A G 184 N2 ? ? ? 1_555 A A 187 N7 ? ? B G 188 B A 191 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP2 ? A A 82 ? B A 86 ? 1_555 MG ? C MG . ? B MG 302 ? 1_555 OP2 ? A G 123 ? B G 127 ? 1_555 114.8 ? 2 OP1 ? A C 83 ? B C 87 ? 1_555 MG ? B MG . ? B MG 301 ? 1_555 OP1 ? A G 165 ? B G 169 ? 1_555 83.3 ? 3 OP1 ? A C 83 ? B C 87 ? 1_555 MG ? B MG . ? B MG 301 ? 1_555 OP1 ? A A 167 ? B A 171 ? 1_555 68.6 ? 4 OP1 ? A G 165 ? B G 169 ? 1_555 MG ? B MG . ? B MG 301 ? 1_555 OP1 ? A A 167 ? B A 171 ? 1_555 74.1 ? 5 OP1 ? A G 123 ? B G 127 ? 1_555 MG ? G MG . ? B MG 306 ? 1_555 OP2 ? A A 167 ? B A 171 ? 1_555 102.8 ? 6 OP1 ? A G 123 ? B G 127 ? 1_555 MG ? G MG . ? B MG 306 ? 1_555 "O2'" ? A G 201 ? B G 205 ? 1_555 95.0 ? 7 OP2 ? A A 167 ? B A 171 ? 1_555 MG ? G MG . ? B MG 306 ? 1_555 "O2'" ? A G 201 ? B G 205 ? 1_555 150.9 ? 8 OP2 ? A U 168 ? B U 172 ? 1_555 MG ? D MG . ? B MG 303 ? 1_555 OP2 ? A A 169 ? B A 173 ? 1_555 72.6 ? # _pdbx_entry_details.entry_id 9X6B _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" B A 46 ? ? "C1'" B A 46 ? ? N9 B A 46 ? ? 113.00 108.50 4.50 0.70 N 2 1 "O4'" B G 134 ? ? "C1'" B G 134 ? ? N9 B G 134 ? ? 113.45 108.50 4.95 0.70 N 3 1 "O4'" B G 168 ? ? "C1'" B G 168 ? ? N9 B G 168 ? ? 112.98 108.50 4.48 0.70 N 4 1 "O4'" B G 204 ? ? "C1'" B G 204 ? ? N9 B G 204 ? ? 112.75 108.50 4.25 0.70 N 5 1 N7 B G 204 ? ? C8 B G 204 ? ? N9 B G 204 ? ? 116.40 113.10 3.30 0.50 N # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9X6B _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 9X6B _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 2.86 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 213341 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.5 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'Cryo-EM structure of the Azoarcus sp. BH72 pre-tRNA(ILE) intron after second-step cyclization (circular form)' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_imaging.entry_id 9X6B _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 800 _em_imaging.nominal_defocus_max 1500 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? _em_imaging.objective_aperture ? _em_imaging.microscope_serial_number ? _em_imaging.microscope_version ? # _em_vitrification.entry_id 9X6B _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 9X6B _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 9X6B _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry C1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 G OP3 O N N 73 G P P N N 74 G OP1 O N N 75 G OP2 O N N 76 G "O5'" O N N 77 G "C5'" C N N 78 G "C4'" C N R 79 G "O4'" O N N 80 G "C3'" C N S 81 G "O3'" O N N 82 G "C2'" C N R 83 G "O2'" O N N 84 G "C1'" C N R 85 G N9 N Y N 86 G C8 C Y N 87 G N7 N Y N 88 G C5 C Y N 89 G C6 C N N 90 G O6 O N N 91 G N1 N N N 92 G C2 C N N 93 G N2 N N N 94 G N3 N N N 95 G C4 C Y N 96 G HOP3 H N N 97 G HOP2 H N N 98 G "H5'" H N N 99 G "H5''" H N N 100 G "H4'" H N N 101 G "H3'" H N N 102 G "HO3'" H N N 103 G "H2'" H N N 104 G "HO2'" H N N 105 G "H1'" H N N 106 G H8 H N N 107 G H1 H N N 108 G H21 H N N 109 G H22 H N N 110 MG MG MG N N 111 U OP3 O N N 112 U P P N N 113 U OP1 O N N 114 U OP2 O N N 115 U "O5'" O N N 116 U "C5'" C N N 117 U "C4'" C N R 118 U "O4'" O N N 119 U "C3'" C N S 120 U "O3'" O N N 121 U "C2'" C N R 122 U "O2'" O N N 123 U "C1'" C N R 124 U N1 N N N 125 U C2 C N N 126 U O2 O N N 127 U N3 N N N 128 U C4 C N N 129 U O4 O N N 130 U C5 C N N 131 U C6 C N N 132 U HOP3 H N N 133 U HOP2 H N N 134 U "H5'" H N N 135 U "H5''" H N N 136 U "H4'" H N N 137 U "H3'" H N N 138 U "HO3'" H N N 139 U "H2'" H N N 140 U "HO2'" H N N 141 U "H1'" H N N 142 U H3 H N N 143 U H5 H N N 144 U H6 H N N 145 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 G OP3 P sing N N 76 G OP3 HOP3 sing N N 77 G P OP1 doub N N 78 G P OP2 sing N N 79 G P "O5'" sing N N 80 G OP2 HOP2 sing N N 81 G "O5'" "C5'" sing N N 82 G "C5'" "C4'" sing N N 83 G "C5'" "H5'" sing N N 84 G "C5'" "H5''" sing N N 85 G "C4'" "O4'" sing N N 86 G "C4'" "C3'" sing N N 87 G "C4'" "H4'" sing N N 88 G "O4'" "C1'" sing N N 89 G "C3'" "O3'" sing N N 90 G "C3'" "C2'" sing N N 91 G "C3'" "H3'" sing N N 92 G "O3'" "HO3'" sing N N 93 G "C2'" "O2'" sing N N 94 G "C2'" "C1'" sing N N 95 G "C2'" "H2'" sing N N 96 G "O2'" "HO2'" sing N N 97 G "C1'" N9 sing N N 98 G "C1'" "H1'" sing N N 99 G N9 C8 sing Y N 100 G N9 C4 sing Y N 101 G C8 N7 doub Y N 102 G C8 H8 sing N N 103 G N7 C5 sing Y N 104 G C5 C6 sing N N 105 G C5 C4 doub Y N 106 G C6 O6 doub N N 107 G C6 N1 sing N N 108 G N1 C2 sing N N 109 G N1 H1 sing N N 110 G C2 N2 sing N N 111 G C2 N3 doub N N 112 G N2 H21 sing N N 113 G N2 H22 sing N N 114 G N3 C4 sing N N 115 U OP3 P sing N N 116 U OP3 HOP3 sing N N 117 U P OP1 doub N N 118 U P OP2 sing N N 119 U P "O5'" sing N N 120 U OP2 HOP2 sing N N 121 U "O5'" "C5'" sing N N 122 U "C5'" "C4'" sing N N 123 U "C5'" "H5'" sing N N 124 U "C5'" "H5''" sing N N 125 U "C4'" "O4'" sing N N 126 U "C4'" "C3'" sing N N 127 U "C4'" "H4'" sing N N 128 U "O4'" "C1'" sing N N 129 U "C3'" "O3'" sing N N 130 U "C3'" "C2'" sing N N 131 U "C3'" "H3'" sing N N 132 U "O3'" "HO3'" sing N N 133 U "C2'" "O2'" sing N N 134 U "C2'" "C1'" sing N N 135 U "C2'" "H2'" sing N N 136 U "O2'" "HO2'" sing N N 137 U "C1'" N1 sing N N 138 U "C1'" "H1'" sing N N 139 U N1 C2 sing N N 140 U N1 C6 sing N N 141 U C2 O2 doub N N 142 U C2 N3 sing N N 143 U N3 C4 sing N N 144 U N3 H3 sing N N 145 U C4 O4 doub N N 146 U C4 C5 sing N N 147 U C5 C6 doub N N 148 U C5 H5 sing N N 149 U C6 H6 sing N N 150 # _em_admin.current_status REL _em_admin.deposition_date 2025-10-15 _em_admin.deposition_site PDBJ _em_admin.entry_id 9X6B _em_admin.last_update 2026-03-25 _em_admin.map_release_date 2026-03-25 _em_admin.title 'Cryo-EM structure of the Azoarcus sp. BH72 pre-tRNA(ILE) intron after second-step cyclization (circular form)' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type NONE # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag YES _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units MEGADALTONS _em_entity_assembly_molwt.value 0.07 # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 418699 _em_entity_assembly_naturalsource.organism 'Azoarcus olearius' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 905932 _em_entity_assembly_recombinant.organism 'in vitro transcription vector pT7-Fluc(deltai)' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 50 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'FEI FALCON IV (4k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # _em_particle_selection.details ? _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.method ? _em_particle_selection.num_particles_selected 2308023 _em_particle_selection.reference_model ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version _em_software.reference_DOI 'PARTICLE SELECTION' ? 1 1 ? ? cryoSPARC 4 ? 'IMAGE ACQUISITION' ? 2 ? ? 1 EPU ? ? MASKING ? 3 ? ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? ? 'MODEL FITTING' ? 7 ? ? ? ? ? ? 'MODEL REFINEMENT' ? 8 ? ? ? ? ? ? OTHER ? 9 ? ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? ? CLASSIFICATION ? 12 1 ? ? cryoSPARC 4 ? RECONSTRUCTION ? 13 1 ? ? cryoSPARC 4 ? 'VOLUME SELECTION' ? 14 1 1 1 ? ? ? 'SERIES ALIGNMENT' ? 15 1 1 1 ? ? ? 'MOLECULAR REPLACEMENT' ? 16 1 1 1 ? ? ? 'LATTICE DISTORTION CORRECTION' ? 17 1 1 1 ? ? ? 'SYMMETRY DETERMINATION' ? 18 1 1 1 ? ? ? 'CRYSTALLOGRAPHY MERGING' ? 19 1 1 1 ? ? ? # _em_specimen.concentration 1 _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 9X6B 'double helix' 9X6B 'a-form double helix' 9X6B 'hairpin loop' 9X6B tetraloop 9X6B 'bulge loop' 9X6B 'mismatched base pair' 9X6B 'internal loop' 9X6B 'quadruple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A C 8 1_555 A G 32 1_555 0.179 -0.202 0.640 9.071 -11.710 -4.849 1 B_C12:G36_B B 12 ? B 36 ? 19 1 1 A C 9 1_555 A G 31 1_555 0.163 -0.180 0.667 4.617 -9.085 -0.914 2 B_C13:G35_B B 13 ? B 35 ? 19 1 1 A U 10 1_555 A A 30 1_555 -0.060 -0.020 0.214 -1.989 -7.798 -0.356 3 B_U14:A34_B B 14 ? B 34 ? 20 1 1 A U 11 1_555 A A 29 1_555 -0.100 -0.087 0.354 0.027 -2.696 0.816 4 B_U15:A33_B B 15 ? B 33 ? 20 1 1 A G 12 1_555 A C 28 1_555 -0.158 -0.146 0.593 1.550 -4.006 -0.811 5 B_G16:C32_B B 16 ? B 32 ? 19 1 1 A C 13 1_555 A G 27 1_555 0.220 -0.168 0.697 0.586 -2.740 0.322 6 B_C17:G31_B B 17 ? B 31 ? 19 1 1 A G 14 1_555 A C 26 1_555 -0.269 -0.145 -0.637 -2.533 -12.865 4.350 7 B_G18:C30_B B 18 ? B 30 ? 19 1 1 A G 17 1_555 A C 24 1_555 -0.209 -0.127 -0.793 -10.866 -4.351 1.320 8 B_G21:C28_B B 21 ? B 28 ? 19 1 1 A G 18 1_555 A C 23 1_555 -0.138 -0.091 -0.478 -8.562 4.707 -2.181 9 B_G22:C27_B B 22 ? B 27 ? 19 1 1 A G 70 1_555 A C 65 1_555 -0.195 -0.203 0.064 1.203 0.344 -2.257 10 B_G74:C69_B B 74 ? B 69 ? 19 1 1 A G 71 1_555 A C 64 1_555 -0.202 -0.152 0.191 6.503 -10.746 1.120 11 B_G75:C68_B B 75 ? B 68 ? 19 1 1 A G 72 1_555 A C 63 1_555 -0.178 -0.189 0.335 0.055 -5.353 -0.501 12 B_G76:C67_B B 76 ? B 67 ? 19 1 1 A C 73 1_555 A G 62 1_555 0.239 -0.188 0.125 1.214 -7.644 1.546 13 B_C77:G66_B B 77 ? B 66 ? 19 1 1 A G 74 1_555 A C 61 1_555 -0.205 -0.186 0.329 0.181 -7.873 -1.324 14 B_G78:C65_B B 78 ? B 65 ? 19 1 1 A U 75 1_555 A G 60 1_555 2.774 -0.515 0.087 -0.105 -9.138 0.081 15 B_U79:G64_B B 79 ? B 64 ? 28 1 1 A U 77 1_555 A A 59 1_555 -0.345 -0.122 -1.402 26.153 14.282 -11.320 16 B_U81:A63_B B 81 ? B 63 ? 20 1 1 A A 185 1_555 A A 76 1_555 1.963 0.795 0.027 -26.115 -2.345 -175.435 17 B_A189:A80_B B 189 ? B 80 ? 1 2 1 A G 78 1_555 A C 56 1_555 -0.222 -0.163 0.005 1.907 -5.792 -0.644 18 B_G82:C60_B B 82 ? B 60 ? 19 1 1 A G 79 1_555 A C 55 1_555 -0.210 -0.172 0.079 -5.253 -4.452 -0.390 19 B_G83:C59_B B 83 ? B 59 ? 19 1 1 A C 80 1_555 A A 54 1_555 3.632 -0.396 -0.080 -8.022 -0.714 -0.046 20 B_C84:A58_B B 84 ? B 58 ? ? 1 1 A A 81 1_555 A A 53 1_555 6.376 -3.527 0.039 6.521 9.133 -25.916 21 B_A85:A57_B B 85 ? B 57 ? ? 10 1 A A 82 1_555 A A 52 1_555 -6.493 -3.987 0.130 -5.390 -10.474 -13.502 22 B_A86:A56_B B 86 ? B 56 ? ? 10 1 A C 83 1_555 A G 51 1_555 0.232 -0.057 -0.003 1.362 -4.438 2.207 23 B_C87:G55_B B 87 ? B 55 ? 19 1 1 A G 84 1_555 A C 50 1_555 -0.243 -0.016 -0.057 -1.576 -3.807 0.594 24 B_G88:C54_B B 88 ? B 54 ? 19 1 1 A C 85 1_555 A G 49 1_555 0.118 -0.039 -0.245 2.433 0.090 -0.837 25 B_C89:G53_B B 89 ? B 53 ? 19 1 1 A C 86 1_555 A G 48 1_555 0.226 -0.162 0.157 -1.159 -2.013 -0.450 26 B_C90:G52_B B 90 ? B 52 ? 19 1 1 A G 87 1_555 A C 47 1_555 -0.227 -0.062 -0.094 1.191 -5.491 1.387 27 B_G91:C51_B B 91 ? B 51 ? 19 1 1 A A 88 1_555 A U 46 1_555 0.043 -0.054 -0.125 3.979 -3.641 6.463 28 B_A92:U50_B B 92 ? B 50 ? 20 1 1 A G 89 1_555 A U 119 1_555 -2.512 -0.266 0.888 7.635 -2.888 0.110 29 B_G93:U123_B B 93 ? B 123 ? 28 1 1 A C 90 1_555 A G 118 1_555 0.142 -0.060 0.416 1.482 -9.270 -1.295 30 B_C94:G122_B B 94 ? B 122 ? 19 1 1 A C 91 1_555 A G 117 1_555 0.176 -0.130 0.205 -2.019 -5.258 -0.783 31 B_C95:G121_B B 95 ? B 121 ? 19 1 1 A A 93 1_555 A A 116 1_555 -3.256 2.038 0.789 21.673 5.737 -30.831 32 B_A97:A120_B B 97 ? B 120 ? ? ? 1 A G 94 1_555 A A 115 1_555 -0.624 1.591 0.014 23.089 -0.851 -12.798 33 B_G98:A119_B B 98 ? B 119 ? 8 1 1 A C 95 1_555 A G 114 1_555 0.180 -0.156 0.282 11.199 -9.464 -0.890 34 B_C99:G118_B B 99 ? B 118 ? 19 1 1 A U 96 1_555 A U 113 1_555 -1.141 -1.472 0.258 -4.956 -21.642 1.861 35 B_U100:U117_B B 100 ? B 117 ? 16 1 1 A U 97 1_555 A A 112 1_555 -0.140 -0.093 0.073 -6.759 -12.130 0.388 36 B_U101:A116_B B 101 ? B 116 ? 20 1 1 A C 98 1_555 A G 111 1_555 0.214 -0.094 0.195 -2.332 -10.116 1.116 37 B_C102:G115_B B 102 ? B 115 ? 19 1 1 A G 99 1_555 A C 110 1_555 -0.267 -0.178 0.038 0.647 -4.606 0.999 38 B_G103:C114_B B 103 ? B 114 ? 19 1 1 A G 100 1_555 A C 109 1_555 -0.195 -0.114 0.052 -1.491 -3.130 0.548 39 B_G104:C113_B B 104 ? B 113 ? 19 1 1 A C 101 1_555 A G 108 1_555 0.253 -0.140 0.109 0.484 -1.835 -0.633 40 B_C105:G112_B B 105 ? B 112 ? 19 1 1 A G 102 1_555 A C 107 1_555 -0.193 -0.146 -0.546 -0.401 -0.115 -0.699 41 B_G106:C111_B B 106 ? B 111 ? 19 1 1 A C 103 1_555 A G 106 1_555 0.072 -0.217 -1.165 18.808 4.750 -1.611 42 B_C107:G110_B B 107 ? B 110 ? 19 1 1 A G 66 1_555 A C 68 1_555 -3.825 -1.117 -2.073 29.721 17.867 10.356 43 B_G70:C72_B B 70 ? B 72 ? ? ? 1 A G 123 1_555 A C 173 1_555 -0.165 -0.116 0.169 -13.393 1.071 0.555 44 B_G127:C177_B B 127 ? B 177 ? 19 1 1 A G 125 1_555 A C 172 1_555 -0.084 -0.047 0.251 5.085 -2.930 -0.409 45 B_G129:C176_B B 129 ? B 176 ? 19 1 1 A A 126 1_555 A U 171 1_555 -0.112 -0.034 0.205 -4.416 -8.901 2.219 46 B_A130:U175_B B 130 ? B 175 ? 20 1 1 A C 127 1_555 A G 170 1_555 0.212 -0.093 0.292 -4.020 -7.453 0.683 47 B_C131:G174_B B 131 ? B 174 ? 19 1 1 A U 128 1_555 A A 169 1_555 0.078 -0.080 0.071 -3.992 -8.696 0.158 48 B_U132:A173_B B 132 ? B 173 ? 20 1 1 A A 129 1_555 A U 168 1_555 0.147 0.009 0.579 -2.259 -7.439 -2.675 49 B_A133:U172_B B 133 ? B 172 ? 20 1 1 A G 130 1_555 A G 165 1_555 -6.322 -0.272 -0.541 1.304 -2.106 -120.922 50 B_G134:G169_B B 134 ? B 169 ? 7 4 1 A A 131 1_555 A A 42 1_555 -4.193 1.490 -0.303 -5.310 6.311 -108.769 51 B_A135:A46_B B 135 ? B 46 ? 5 4 1 A G 133 1_555 A C 41 1_555 -0.280 -0.118 0.122 9.237 -4.667 -0.526 52 B_G137:C45_B B 137 ? B 45 ? 19 1 1 A G 134 1_555 A U 40 1_555 -2.230 -0.213 0.325 4.635 -17.977 7.534 53 B_G138:U44_B B 138 ? B 44 ? 28 1 1 A C 135 1_555 A G 39 1_555 0.254 -0.061 0.160 -0.223 -13.024 1.653 54 B_C139:G43_B B 139 ? B 43 ? 19 1 1 A A 136 1_555 A U 38 1_555 0.031 -0.037 0.356 0.635 -11.467 1.751 55 B_A140:U42_B B 140 ? B 42 ? 20 1 1 A C 137 1_555 A G 37 1_555 0.223 -0.126 0.315 2.900 -9.865 -0.884 56 B_C141:G41_B B 141 ? B 41 ? 19 1 1 A C 138 1_555 A G 36 1_555 0.261 -0.235 0.248 0.352 -9.659 -0.138 57 B_C142:G40_B B 142 ? B 40 ? 19 1 1 A C 139 1_555 A G 161 1_555 0.230 -0.073 0.190 -0.384 -7.502 -0.513 58 B_C143:G165_B B 143 ? B 165 ? 19 1 1 A A 140 1_555 A U 160 1_555 0.028 -0.061 0.414 8.428 -11.910 2.345 59 B_A144:U164_B B 144 ? B 164 ? 20 1 1 A C 141 1_555 A G 159 1_555 0.205 -0.134 0.363 3.083 -12.348 0.307 60 B_C145:G163_B B 145 ? B 163 ? 19 1 1 A C 142 1_555 A G 158 1_555 0.270 -0.224 -0.156 -2.405 -5.463 -0.605 61 B_C146:G162_B B 146 ? B 162 ? 19 1 1 A A 156 1_555 A A 20 1_555 2.055 1.061 0.392 -21.601 1.641 -179.708 62 B_A160:A24_B B 160 ? B 24 ? 1 2 1 A U 157 1_555 A A 145 1_555 -0.224 -0.182 -1.128 17.056 15.931 -7.857 63 B_U161:A149_B B 161 ? B 149 ? 20 1 1 A G 146 1_555 A U 155 1_555 -3.511 -1.198 0.118 3.073 -5.700 -11.128 64 B_G150:U159_B B 150 ? B 159 ? 28 1 1 A G 147 1_555 A C 154 1_555 -0.217 -0.180 0.258 -0.649 -5.216 -1.333 65 B_G151:C158_B B 151 ? B 158 ? 19 1 1 A C 148 1_555 A G 153 1_555 0.188 -0.209 0.445 -4.583 -4.744 -1.126 66 B_C152:G157_B B 152 ? B 157 ? 19 1 1 A G 175 1_555 A C 199 1_555 -0.242 -0.119 -0.197 1.364 -10.329 2.768 67 B_G179:C203_B B 179 ? B 203 ? 19 1 1 A G 176 1_555 A C 198 1_555 -0.207 -0.065 -0.224 -5.623 -4.874 1.596 68 B_G180:C202_B B 180 ? B 202 ? 19 1 1 A G 177 1_555 A A 197 1_555 6.781 -3.893 -0.609 0.627 -0.236 -4.098 69 B_G181:A201_B B 181 ? B 201 ? 11 10 1 A A 178 1_555 A A 196 1_555 -6.600 4.878 0.649 -16.479 9.106 -174.919 70 B_A182:A200_B B 182 ? B 200 ? 2 8 1 A G 179 1_555 A C 192 1_555 -0.235 -0.141 -0.509 -12.236 -8.729 -1.025 71 B_G183:C196_B B 183 ? B 196 ? 19 1 1 A U 180 1_555 A A 191 1_555 -0.073 -0.061 -0.035 -6.021 -6.803 -1.771 72 B_U184:A195_B B 184 ? B 195 ? 20 1 1 A G 181 1_555 A C 190 1_555 -0.227 -0.081 -0.364 -1.879 -7.763 0.959 73 B_G185:C194_B B 185 ? B 194 ? 19 1 1 A G 182 1_555 A U 189 1_555 -2.386 -0.410 -0.458 -6.841 -2.153 -3.882 74 B_G186:U193_B B 186 ? B 193 ? 28 1 1 A C 183 1_555 A G 188 1_555 0.185 -0.125 -0.296 -2.039 7.141 -1.686 75 B_C187:G192_B B 187 ? B 192 ? 19 1 1 A G 184 1_555 A A 187 1_555 7.055 -5.095 0.893 17.995 4.642 -12.388 76 B_G188:A191_B B 188 ? B 191 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A C 8 1_555 A G 32 1_555 A C 9 1_555 A G 31 1_555 0.355 -1.956 3.345 -3.069 2.466 35.321 -3.565 -1.029 3.164 4.048 5.039 35.533 1 BB_C12C13:G35G36_BB B 12 ? B 36 ? B 13 ? B 35 ? 1 A C 9 1_555 A G 31 1_555 A U 10 1_555 A A 30 1_555 -0.436 -1.887 3.482 0.243 3.830 31.453 -4.184 0.845 3.232 7.033 -0.446 31.680 2 BB_C13U14:A34G35_BB B 13 ? B 35 ? B 14 ? B 34 ? 1 A U 10 1_555 A A 30 1_555 A U 11 1_555 A A 29 1_555 0.331 -1.182 3.314 -0.446 3.298 32.741 -2.646 -0.659 3.178 5.832 0.789 32.905 3 BB_U14U15:A33A34_BB B 14 ? B 34 ? B 15 ? B 33 ? 1 A U 11 1_555 A A 29 1_555 A G 12 1_555 A C 28 1_555 0.395 -1.611 2.933 0.147 13.959 32.343 -4.338 -0.637 2.084 23.727 -0.249 35.153 4 BB_U15G16:C32A33_BB B 15 ? B 33 ? B 16 ? B 32 ? 1 A G 12 1_555 A C 28 1_555 A C 13 1_555 A G 27 1_555 0.501 -1.820 3.369 0.149 1.772 32.720 -3.535 -0.862 3.271 3.143 -0.264 32.767 5 BB_G16C17:G31C32_BB B 16 ? B 32 ? B 17 ? B 31 ? 1 A C 13 1_555 A G 27 1_555 A G 14 1_555 A C 26 1_555 0.280 -1.772 2.989 10.266 16.882 31.036 -4.675 0.683 1.823 28.249 -17.179 36.661 6 BB_C17G18:C30G31_BB B 17 ? B 31 ? B 18 ? B 30 ? 1 A G 17 1_555 A C 24 1_555 A G 18 1_555 A C 23 1_555 -0.527 -1.845 3.630 -3.987 2.258 29.139 -4.154 0.100 3.519 4.454 7.863 29.489 7 BB_G21G22:C27C28_BB B 21 ? B 28 ? B 22 ? B 27 ? 1 A G 70 1_555 A C 65 1_555 A G 71 1_555 A C 64 1_555 0.937 -1.884 2.942 -1.324 8.421 31.869 -4.498 -1.837 2.342 15.004 2.358 32.960 8 BB_G74G75:C68C69_BB B 74 ? B 69 ? B 75 ? B 68 ? 1 A G 71 1_555 A C 64 1_555 A G 72 1_555 A C 63 1_555 -0.898 -2.256 3.375 -6.255 2.816 28.318 -5.120 0.379 3.260 5.652 12.554 29.121 9 BB_G75G76:C67C68_BB B 75 ? B 68 ? B 76 ? B 67 ? 1 A G 72 1_555 A C 63 1_555 A C 73 1_555 A G 62 1_555 -0.531 -1.383 3.356 -0.122 1.039 35.133 -2.449 0.861 3.317 1.722 0.203 35.148 10 BB_G76C77:G66C67_BB B 76 ? B 67 ? B 77 ? B 66 ? 1 A C 73 1_555 A G 62 1_555 A G 74 1_555 A C 61 1_555 0.034 -1.583 3.187 -1.066 12.165 29.189 -4.898 -0.237 2.353 22.916 2.009 31.589 11 BB_C77G78:C65G66_BB B 77 ? B 66 ? B 78 ? B 65 ? 1 A G 74 1_555 A C 61 1_555 A U 75 1_555 A G 60 1_555 0.088 -1.074 3.493 2.926 1.264 43.377 -1.579 0.182 3.460 1.707 -3.952 43.488 12 BB_G78U79:G64C65_BB B 78 ? B 65 ? B 79 ? B 64 ? 1 A U 75 1_555 A G 60 1_555 A U 77 1_555 A A 59 1_555 -4.791 0.041 2.326 12.935 28.555 46.895 -0.866 5.522 0.948 32.056 -14.521 55.911 13 BB_U79U81:A63G64_BB B 79 ? B 64 ? B 81 ? B 63 ? 1 A U 77 1_555 A A 59 1_555 A A 185 1_555 A A 76 1_555 2.339 -0.319 4.546 3.259 -18.763 -133.404 0.345 1.300 4.484 10.197 1.771 -134.083 14 BB_U81A189:A80A63_BB B 81 ? B 63 ? B 189 ? B 80 ? 1 A A 185 1_555 A A 76 1_555 A G 78 1_555 A C 56 1_555 -3.608 -4.774 4.455 17.725 20.559 -156.195 2.349 -1.766 4.745 -10.497 9.050 -156.869 15 BB_A189G82:C60A80_BB B 189 ? B 80 ? B 82 ? B 60 ? 1 A G 78 1_555 A C 56 1_555 A G 79 1_555 A C 55 1_555 0.862 -2.409 3.469 0.677 7.453 27.547 -6.534 -1.599 2.755 15.296 -1.390 28.527 16 BB_G82G83:C59C60_BB B 82 ? B 60 ? B 83 ? B 59 ? 1 A G 79 1_555 A C 55 1_555 A C 80 1_555 A A 54 1_555 -0.314 -0.990 3.475 3.699 4.751 49.822 -1.525 0.649 3.344 5.616 -4.373 50.162 17 BB_G83C84:A58C59_BB B 83 ? B 59 ? B 84 ? B 58 ? 1 A C 80 1_555 A A 54 1_555 A A 81 1_555 A A 53 1_555 -1.476 -1.021 3.157 6.002 4.887 43.500 -1.779 2.481 2.814 6.532 -8.023 44.151 18 BB_C84A85:A57A58_BB B 84 ? B 58 ? B 85 ? B 57 ? 1 A A 81 1_555 A A 53 1_555 A A 82 1_555 A A 52 1_555 0.709 -0.960 3.722 -2.803 1.880 -8.625 1.010 -2.966 3.876 -11.916 -17.768 -9.261 19 BB_A85A86:A56A57_BB B 85 ? B 57 ? B 86 ? B 56 ? 1 A A 82 1_555 A A 52 1_555 A C 83 1_555 A G 51 1_555 2.183 -0.732 3.343 2.053 2.851 55.007 -0.964 -2.235 3.378 3.084 -2.220 55.110 20 BB_A86C87:G55A56_BB B 86 ? B 56 ? B 87 ? B 55 ? 1 A C 83 1_555 A G 51 1_555 A G 84 1_555 A C 50 1_555 -1.027 -2.220 3.332 0.132 11.065 29.927 -5.862 1.893 2.377 20.562 -0.246 31.864 21 BB_C87G88:C54G55_BB B 87 ? B 55 ? B 88 ? B 54 ? 1 A G 84 1_555 A C 50 1_555 A C 85 1_555 A G 49 1_555 0.769 -2.524 3.405 0.983 2.841 23.973 -6.937 -1.524 3.118 6.806 -2.355 24.158 22 BB_G88C89:G53C54_BB B 88 ? B 54 ? B 89 ? B 53 ? 1 A C 85 1_555 A G 49 1_555 A C 86 1_555 A G 48 1_555 -0.707 -2.480 3.637 -4.393 -0.688 28.757 -4.766 0.314 3.758 -1.375 8.779 29.092 23 BB_C89C90:G52G53_BB B 89 ? B 53 ? B 90 ? B 52 ? 1 A C 86 1_555 A G 48 1_555 A G 87 1_555 A C 47 1_555 -1.104 -1.698 3.180 -1.131 10.626 30.333 -4.773 1.815 2.497 19.560 2.082 32.118 24 BB_C90G91:C51G52_BB B 90 ? B 52 ? B 91 ? B 51 ? 1 A G 87 1_555 A C 47 1_555 A A 88 1_555 A U 46 1_555 0.743 -1.611 3.409 -1.505 7.411 25.564 -5.375 -1.994 2.791 16.299 3.310 26.641 25 BB_G91A92:U50C51_BB B 91 ? B 51 ? B 92 ? B 50 ? 1 A A 88 1_555 A U 46 1_555 A G 89 1_555 A U 119 1_555 2.517 -1.192 2.728 -4.056 7.495 47.807 -1.901 -3.307 2.319 9.164 4.959 48.516 26 BB_A92G93:U123U50_BB B 92 ? B 50 ? B 93 ? B 123 ? 1 A G 89 1_555 A U 119 1_555 A C 90 1_555 A G 118 1_555 -0.144 -1.627 3.618 1.532 5.093 41.047 -2.890 0.380 3.394 7.226 -2.174 41.375 27 BB_G93C94:G122U123_BB B 93 ? B 123 ? B 94 ? B 122 ? 1 A C 90 1_555 A G 118 1_555 A C 91 1_555 A G 117 1_555 -0.554 -2.212 3.441 -0.534 4.305 28.839 -5.337 0.983 3.095 8.582 1.065 29.156 28 BB_C94C95:G121G122_BB B 94 ? B 122 ? B 95 ? B 121 ? 1 A C 91 1_555 A G 117 1_555 A A 93 1_555 A A 116 1_555 -4.794 -0.541 4.110 9.064 16.039 39.146 -2.440 7.487 2.586 22.488 -12.709 43.110 29 BB_C95A97:A120G121_BB B 95 ? B 121 ? B 97 ? B 120 ? 1 A A 93 1_555 A A 116 1_555 A G 94 1_555 A A 115 1_555 0.667 -1.874 3.455 -2.261 11.532 33.507 -4.702 -1.413 2.638 19.281 3.781 35.453 30 BB_A97G98:A119A120_BB B 97 ? B 120 ? B 98 ? B 119 ? 1 A G 94 1_555 A A 115 1_555 A C 95 1_555 A G 114 1_555 0.863 -1.884 3.484 -5.320 9.622 36.673 -4.060 -1.972 2.773 14.887 8.231 38.231 31 BB_G98C99:G118A119_BB B 98 ? B 119 ? B 99 ? B 118 ? 1 A C 95 1_555 A G 114 1_555 A U 96 1_555 A U 113 1_555 0.014 -1.682 3.433 -4.398 14.476 35.403 -4.283 -0.546 2.558 22.575 6.859 38.405 32 BB_C99U100:U117G118_BB B 99 ? B 118 ? B 100 ? B 117 ? 1 A U 96 1_555 A U 113 1_555 A U 97 1_555 A A 112 1_555 -0.542 -1.570 3.493 -0.510 2.987 33.628 -3.211 0.847 3.352 5.150 0.879 33.761 33 BB_U100U101:A116U117_BB B 100 ? B 117 ? B 101 ? B 116 ? 1 A U 97 1_555 A A 112 1_555 A C 98 1_555 A G 111 1_555 0.289 -1.495 3.320 -1.333 1.925 31.106 -3.147 -0.790 3.209 3.584 2.481 31.192 34 BB_U101C102:G115A116_BB B 101 ? B 116 ? B 102 ? B 115 ? 1 A C 98 1_555 A G 111 1_555 A G 99 1_555 A C 110 1_555 -0.290 -1.713 2.982 -2.817 15.261 27.195 -5.458 0.119 1.809 29.596 5.463 31.238 35 BB_C102G103:C114G115_BB B 102 ? B 115 ? B 103 ? B 114 ? 1 A G 99 1_555 A C 110 1_555 A G 100 1_555 A C 109 1_555 -0.201 -1.649 3.148 -1.151 5.078 35.661 -3.336 0.173 2.898 8.238 1.867 36.027 36 BB_G103G104:C113C114_BB B 103 ? B 114 ? B 104 ? B 113 ? 1 A G 100 1_555 A C 109 1_555 A C 101 1_555 A G 108 1_555 -0.066 -1.282 3.175 0.732 5.788 34.774 -2.924 0.211 2.929 9.600 -1.214 35.245 37 BB_G104C105:G112C113_BB B 104 ? B 113 ? B 105 ? B 112 ? 1 A C 101 1_555 A G 108 1_555 A G 102 1_555 A C 107 1_555 -0.050 -1.146 2.928 5.099 21.542 31.872 -3.852 0.578 1.801 34.515 -8.170 38.641 38 BB_C105G106:C111G112_BB B 105 ? B 112 ? B 106 ? B 111 ? 1 A G 102 1_555 A C 107 1_555 A C 103 1_555 A G 106 1_555 -0.850 -2.227 2.850 1.578 6.480 7.437 -20.036 6.649 0.546 40.747 -9.921 9.986 39 BB_G106C107:G110C111_BB B 106 ? B 111 ? B 107 ? B 110 ? 1 A G 123 1_555 A C 173 1_555 A G 125 1_555 A C 172 1_555 -2.795 -1.063 2.964 2.157 -4.097 50.352 -0.983 3.411 2.922 -4.804 -2.529 50.550 40 BB_G127G129:C176C177_BB B 127 ? B 177 ? B 129 ? B 176 ? 1 A G 125 1_555 A C 172 1_555 A A 126 1_555 A U 171 1_555 -1.591 -2.501 3.383 -4.586 4.255 31.375 -5.325 2.042 3.219 7.772 8.376 31.978 41 BB_G129A130:U175C176_BB B 129 ? B 176 ? B 130 ? B 175 ? 1 A A 126 1_555 A U 171 1_555 A C 127 1_555 A G 170 1_555 0.182 -1.599 3.341 -0.992 6.842 32.980 -3.844 -0.472 2.953 11.889 1.724 33.677 42 BB_A130C131:G174U175_BB B 130 ? B 175 ? B 131 ? B 174 ? 1 A C 127 1_555 A G 170 1_555 A U 128 1_555 A A 169 1_555 -0.941 -1.868 3.298 0.662 10.410 25.852 -6.119 2.097 2.358 22.155 -1.408 27.844 43 BB_C131U132:A173G174_BB B 131 ? B 174 ? B 132 ? B 173 ? 1 A U 128 1_555 A A 169 1_555 A A 129 1_555 A U 168 1_555 0.894 -1.227 3.113 0.768 5.202 36.990 -2.555 -1.303 2.937 8.148 -1.202 37.348 44 BB_U132A133:U172A173_BB B 132 ? B 173 ? B 133 ? B 172 ? 1 A A 129 1_555 A U 168 1_555 A G 130 1_555 A G 165 1_555 -3.249 -1.552 1.138 -91.884 152.730 66.038 -1.253 1.338 0.910 76.708 46.149 178.523 45 BB_A133G134:G169U172_BB B 133 ? B 172 ? B 134 ? B 169 ? 1 A G 130 1_555 A G 165 1_555 A A 131 1_555 A A 42 1_555 3.535 -0.919 1.103 79.783 157.394 -121.364 0.263 1.867 0.581 -78.899 39.994 -178.267 46 BB_G134A135:A46G169_BB B 134 ? B 169 ? B 135 ? B 46 ? 1 A A 131 1_555 A A 42 1_555 A G 133 1_555 A C 41 1_555 2.637 -1.606 3.179 -13.982 8.962 57.721 -1.991 -3.237 2.292 9.079 14.164 59.865 47 BB_A135G137:C45A46_BB B 135 ? B 46 ? B 137 ? B 45 ? 1 A G 133 1_555 A C 41 1_555 A G 134 1_555 A U 40 1_555 0.501 -1.901 3.039 -5.712 15.810 30.060 -5.154 -1.547 1.734 27.908 10.083 34.346 48 BB_G137G138:U44C45_BB B 137 ? B 45 ? B 138 ? B 44 ? 1 A G 134 1_555 A U 40 1_555 A C 135 1_555 A G 39 1_555 -0.256 -1.375 3.637 -0.326 2.262 41.235 -2.218 0.324 3.562 3.209 0.462 41.296 49 BB_G138C139:G43U44_BB B 138 ? B 44 ? B 139 ? B 43 ? 1 A C 135 1_555 A G 39 1_555 A A 136 1_555 A U 38 1_555 0.215 -1.422 3.083 1.047 12.015 32.345 -4.025 -0.221 2.422 20.692 -1.804 34.464 50 BB_C139A140:U42G43_BB B 139 ? B 43 ? B 140 ? B 42 ? 1 A A 136 1_555 A U 38 1_555 A C 137 1_555 A G 37 1_555 0.210 -1.683 3.382 1.206 2.326 29.011 -3.863 -0.150 3.246 4.631 -2.402 29.126 51 BB_A140C141:G41U42_BB B 140 ? B 42 ? B 141 ? B 41 ? 1 A C 137 1_555 A G 37 1_555 A C 138 1_555 A G 36 1_555 0.387 -2.038 3.383 0.249 3.087 33.326 -4.051 -0.631 3.189 5.369 -0.433 33.466 52 BB_C141C142:G40G41_BB B 141 ? B 41 ? B 142 ? B 40 ? 1 A C 138 1_555 A G 36 1_555 A C 139 1_555 A G 161 1_555 0.318 -1.921 3.387 -0.065 2.835 37.612 -3.344 -0.501 3.238 4.389 0.101 37.715 53 BB_C142C143:G165G40_BB B 142 ? B 40 ? B 143 ? B 165 ? 1 A C 139 1_555 A G 161 1_555 A A 140 1_555 A U 160 1_555 -0.720 -1.507 3.027 -7.454 13.330 26.853 -5.054 0.114 2.176 26.186 14.643 30.823 54 BB_C143A144:U164G165_BB B 143 ? B 165 ? B 144 ? B 164 ? 1 A A 140 1_555 A U 160 1_555 A C 141 1_555 A G 159 1_555 0.252 -1.339 3.500 -1.557 4.826 36.472 -2.805 -0.620 3.289 7.665 2.473 36.811 55 BB_A144C145:G163U164_BB B 144 ? B 164 ? B 145 ? B 163 ? 1 A C 141 1_555 A G 159 1_555 A C 142 1_555 A G 158 1_555 -0.876 -2.286 3.418 1.090 6.495 28.645 -5.854 1.954 2.808 12.912 -2.167 29.376 56 BB_C145C146:G162G163_BB B 145 ? B 163 ? B 146 ? B 162 ? 1 A C 142 1_555 A G 158 1_555 A A 156 1_555 A A 20 1_555 -4.402 -5.822 0.170 -147.129 -30.055 74.336 -2.746 1.132 4.415 -16.183 79.221 156.327 57 BB_C146A160:A24G162_BB B 146 ? B 162 ? B 160 ? B 24 ? 1 A A 156 1_555 A A 20 1_555 A U 157 1_555 A A 145 1_555 0.657 2.276 -4.325 14.725 3.264 -42.634 -2.562 -0.974 -4.461 -4.331 19.536 -45.106 58 BB_A160U161:A149A24_BB B 160 ? B 24 ? B 161 ? B 149 ? 1 A U 157 1_555 A A 145 1_555 A G 146 1_555 A U 155 1_555 0.667 -2.855 3.763 139.379 -57.903 136.010 -1.147 0.355 4.128 -29.342 -70.629 169.212 59 BB_U161G150:U159A149_BB B 161 ? B 149 ? B 150 ? B 159 ? 1 A G 146 1_555 A U 155 1_555 A G 147 1_555 A C 154 1_555 0.501 -1.411 3.463 -2.483 4.619 46.007 -2.201 -0.855 3.285 5.888 3.165 46.289 60 BB_G150G151:C158U159_BB B 150 ? B 159 ? B 151 ? B 158 ? 1 A G 147 1_555 A C 154 1_555 A C 148 1_555 A G 153 1_555 0.607 -2.174 3.440 0.412 2.558 32.063 -4.393 -1.020 3.269 4.621 -0.744 32.165 61 BB_G151C152:G157C158_BB B 151 ? B 158 ? B 152 ? B 157 ? 1 A G 175 1_555 A C 199 1_555 A G 176 1_555 A C 198 1_555 -0.089 -1.739 3.565 -0.493 5.950 33.429 -3.976 0.070 3.218 10.243 0.848 33.943 62 BB_G179G180:C202C203_BB B 179 ? B 203 ? B 180 ? B 202 ? 1 A G 176 1_555 A C 198 1_555 A G 177 1_555 A A 197 1_555 -0.725 -0.675 3.646 2.614 2.890 57.279 -0.876 0.912 3.578 3.011 -2.723 57.400 63 BB_G180G181:A201C202_BB B 180 ? B 202 ? B 181 ? B 201 ? 1 A G 177 1_555 A A 197 1_555 A A 178 1_555 A A 196 1_555 3.584 -0.030 -0.302 -84.624 -151.477 -144.998 0.010 1.795 0.229 75.869 -42.385 -178.050 64 BB_G181A182:A200A201_BB B 181 ? B 201 ? B 182 ? B 200 ? 1 A G 179 1_555 A C 192 1_555 A U 180 1_555 A A 191 1_555 -0.651 -1.105 3.270 -5.505 3.260 31.956 -2.538 0.201 3.209 5.849 9.875 32.574 65 BB_G183U184:A195C196_BB B 183 ? B 196 ? B 184 ? B 195 ? 1 A U 180 1_555 A A 191 1_555 A G 181 1_555 A C 190 1_555 0.060 -1.406 3.222 -0.220 10.164 28.731 -4.536 -0.155 2.585 19.720 0.426 30.441 66 BB_U184G185:C194A195_BB B 184 ? B 195 ? B 185 ? B 194 ? 1 A G 181 1_555 A C 190 1_555 A G 182 1_555 A U 189 1_555 -0.127 -2.140 3.489 -4.772 6.612 21.390 -7.691 -1.336 2.680 17.038 12.296 22.875 67 BB_G185G186:U193C194_BB B 185 ? B 194 ? B 186 ? B 193 ? 1 A G 182 1_555 A U 189 1_555 A C 183 1_555 A G 188 1_555 -0.357 -1.454 3.448 -3.882 4.138 41.770 -2.465 0.081 3.314 5.772 5.415 42.136 68 BB_G186C187:G192U193_BB B 186 ? B 193 ? B 187 ? B 192 ? 1 A C 183 1_555 A G 188 1_555 A G 184 1_555 A A 187 1_555 -1.743 -1.035 2.952 -3.296 7.418 53.426 -1.551 1.737 2.890 8.197 3.642 53.994 69 BB_C187G188:A191G192_BB B 187 ? B 192 ? B 188 ? B 191 ? # _pdbx_audit_support.funding_organization 'Other government' _pdbx_audit_support.country China _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 9X6B _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C MG N O P # loop_ #