HEADER TRANSFERASE 30-OCT-25 9XGT TITLE STRUCTURE OF THE EPHTT FROM ECHINACEA PURPUREA COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYDROXYCINNAMOYL-COA: TARTARIC ACID HYDROXYCINNAMOYL COMPND 3 TRANSFERASE; COMPND 4 CHAIN: A, B; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ECHINACEA PURPUREA; SOURCE 3 ORGANISM_TAXID: 53751; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 866768 KEYWDS HYDROXYCINNAMOYL-COA:TARTARIC ACID HYDROXYCINNAMOYL TRANSFERASE, KEYWDS 2 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR D.TANG,H.BAO,D.JIANG,X.F.HUANG REVDAT 1 04-NOV-26 9XGT 0 SPRSDE 04-NOV-26 9XGT 9WTS JRNL AUTH B.HUI,J.DI JRNL TITL STRUCTURE OF THE EPHTT PROTEIN FROM ECHINACEA PURPUREA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.38 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.20.1_4487: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.38 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.09 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 3 NUMBER OF REFLECTIONS : 43489 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.060 REMARK 3 FREE R VALUE TEST SET COUNT : 1764 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.0900 - 5.6000 0.95 3319 142 0.1500 0.1895 REMARK 3 2 5.6000 - 4.4500 0.99 3297 140 0.1402 0.1772 REMARK 3 3 4.4500 - 3.8900 0.96 3218 137 0.1452 0.2308 REMARK 3 4 3.8800 - 3.5300 0.99 3275 137 0.1665 0.2223 REMARK 3 5 3.5300 - 3.2800 0.99 3286 138 0.1962 0.2258 REMARK 3 6 3.2800 - 3.0800 0.99 3258 137 0.2088 0.2705 REMARK 3 7 3.0800 - 2.9300 0.99 3225 137 0.2335 0.3200 REMARK 3 8 2.9300 - 2.8000 0.97 3192 133 0.2419 0.2981 REMARK 3 9 2.8000 - 2.6900 0.96 3120 138 0.2305 0.2769 REMARK 3 10 2.6900 - 2.6000 0.98 3200 133 0.2425 0.2890 REMARK 3 11 2.6000 - 2.5200 0.97 3166 137 0.2658 0.3335 REMARK 3 12 2.5200 - 2.4500 0.96 3129 131 0.2893 0.3720 REMARK 3 13 2.4500 - 2.3800 0.94 3040 124 0.3058 0.3523 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.320 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 6908 REMARK 3 ANGLE : 1.077 9370 REMARK 3 CHIRALITY : 0.054 1010 REMARK 3 PLANARITY : 0.018 1211 REMARK 3 DIHEDRAL : 6.382 928 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3 THROUGH 70 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.8495 21.7951 -14.3209 REMARK 3 T TENSOR REMARK 3 T11: 0.4915 T22: 0.4375 REMARK 3 T33: 0.3141 T12: -0.0497 REMARK 3 T13: 0.0583 T23: 0.1122 REMARK 3 L TENSOR REMARK 3 L11: 2.1556 L22: 6.3964 REMARK 3 L33: 1.9230 L12: -1.3426 REMARK 3 L13: -0.0167 L23: 0.7482 REMARK 3 S TENSOR REMARK 3 S11: -0.0616 S12: -0.1201 S13: 0.0602 REMARK 3 S21: 0.1714 S22: 0.1809 S23: 0.6619 REMARK 3 S31: 0.1500 S32: -0.2125 S33: -0.1027 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 71 THROUGH 192 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.5371 20.3080 -12.8978 REMARK 3 T TENSOR REMARK 3 T11: 0.5080 T22: 0.3786 REMARK 3 T33: 0.2764 T12: 0.0126 REMARK 3 T13: 0.0308 T23: 0.0734 REMARK 3 L TENSOR REMARK 3 L11: 1.8741 L22: 3.7423 REMARK 3 L33: 1.6466 L12: -0.5822 REMARK 3 L13: -0.1304 L23: 0.0696 REMARK 3 S TENSOR REMARK 3 S11: -0.0471 S12: -0.1163 S13: -0.0603 REMARK 3 S21: 0.4266 S22: 0.1755 S23: 0.2430 REMARK 3 S31: 0.3191 S32: -0.0211 S33: -0.1275 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 193 THROUGH 332 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.7958 17.8245 -19.1030 REMARK 3 T TENSOR REMARK 3 T11: 0.6340 T22: 0.5890 REMARK 3 T33: 0.5211 T12: 0.1680 REMARK 3 T13: -0.0923 T23: -0.1086 REMARK 3 L TENSOR REMARK 3 L11: 3.0683 L22: 5.1409 REMARK 3 L33: 1.1166 L12: 1.1080 REMARK 3 L13: -0.0445 L23: 0.3317 REMARK 3 S TENSOR REMARK 3 S11: -0.0629 S12: -0.1983 S13: -0.2702 REMARK 3 S21: 0.2137 S22: 0.2786 S23: -1.1645 REMARK 3 S31: 0.4130 S32: 0.4124 S33: -0.2062 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 333 THROUGH 428 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.7166 22.4745 -15.7228 REMARK 3 T TENSOR REMARK 3 T11: 0.5291 T22: 0.4640 REMARK 3 T33: 0.3212 T12: 0.1047 REMARK 3 T13: -0.0607 T23: -0.0466 REMARK 3 L TENSOR REMARK 3 L11: 1.5619 L22: 3.2911 REMARK 3 L33: 1.6241 L12: -0.3906 REMARK 3 L13: -0.4041 L23: 0.2856 REMARK 3 S TENSOR REMARK 3 S11: -0.1778 S12: -0.1883 S13: 0.0348 REMARK 3 S21: 0.5763 S22: 0.3372 S23: -0.4191 REMARK 3 S31: 0.2824 S32: 0.2951 S33: -0.1708 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 4 THROUGH 70 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.2182 67.2791 -34.8266 REMARK 3 T TENSOR REMARK 3 T11: 0.5787 T22: 0.4242 REMARK 3 T33: 0.6099 T12: -0.1964 REMARK 3 T13: 0.1478 T23: -0.0591 REMARK 3 L TENSOR REMARK 3 L11: 1.7471 L22: 5.9768 REMARK 3 L33: 2.0983 L12: -0.3835 REMARK 3 L13: 0.9006 L23: -0.2000 REMARK 3 S TENSOR REMARK 3 S11: -0.1469 S12: 0.1493 S13: 0.1488 REMARK 3 S21: -0.5563 S22: 0.2852 S23: -0.8323 REMARK 3 S31: -0.2691 S32: 0.2577 S33: -0.1098 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 71 THROUGH 204 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.3533 70.9164 -28.4752 REMARK 3 T TENSOR REMARK 3 T11: 0.5747 T22: 0.4157 REMARK 3 T33: 0.5816 T12: -0.1359 REMARK 3 T13: 0.0494 T23: -0.0713 REMARK 3 L TENSOR REMARK 3 L11: 0.9609 L22: 2.8322 REMARK 3 L33: 1.5348 L12: -0.6516 REMARK 3 L13: 0.0900 L23: -0.3138 REMARK 3 S TENSOR REMARK 3 S11: -0.1266 S12: -0.0126 S13: 0.2880 REMARK 3 S21: 0.0713 S22: 0.1933 S23: -0.4376 REMARK 3 S31: -0.4956 S32: 0.1195 S33: -0.0845 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 205 THROUGH 230 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.8239 64.9629 -4.2297 REMARK 3 T TENSOR REMARK 3 T11: 0.7779 T22: 0.5755 REMARK 3 T33: 0.5522 T12: 0.0318 REMARK 3 T13: 0.0029 T23: 0.0112 REMARK 3 L TENSOR REMARK 3 L11: 3.9870 L22: 3.5639 REMARK 3 L33: 4.0484 L12: 2.3344 REMARK 3 L13: 3.4872 L23: 1.1094 REMARK 3 S TENSOR REMARK 3 S11: 0.0641 S12: 0.0459 S13: -0.2308 REMARK 3 S21: 0.7051 S22: -0.0111 S23: -0.6500 REMARK 3 S31: -0.4176 S32: 0.3859 S33: -0.0457 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 231 THROUGH 360 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.6781 71.7288 -8.5261 REMARK 3 T TENSOR REMARK 3 T11: 0.7988 T22: 0.4993 REMARK 3 T33: 0.6031 T12: 0.1063 REMARK 3 T13: 0.1084 T23: -0.0837 REMARK 3 L TENSOR REMARK 3 L11: 0.9667 L22: 5.7924 REMARK 3 L33: 1.9904 L12: 0.7314 REMARK 3 L13: -0.1192 L23: -0.6339 REMARK 3 S TENSOR REMARK 3 S11: 0.0559 S12: -0.3332 S13: 0.3014 REMARK 3 S21: 1.0569 S22: 0.0251 S23: 0.6094 REMARK 3 S31: -0.4752 S32: -0.1041 S33: -0.0858 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 361 THROUGH 428 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.6823 58.2156 -16.8478 REMARK 3 T TENSOR REMARK 3 T11: 0.5201 T22: 0.3139 REMARK 3 T33: 0.4353 T12: -0.0060 REMARK 3 T13: 0.0380 T23: -0.0737 REMARK 3 L TENSOR REMARK 3 L11: 2.2336 L22: 2.0689 REMARK 3 L33: 8.0495 L12: 0.9373 REMARK 3 L13: -3.7362 L23: -1.6086 REMARK 3 S TENSOR REMARK 3 S11: 0.1077 S12: -0.1851 S13: 0.2520 REMARK 3 S21: 0.3332 S22: 0.2713 S23: 0.0000 REMARK 3 S31: -0.2974 S32: 0.2085 S33: -0.3692 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9XGT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 03-NOV-25. REMARK 100 THE DEPOSITION ID IS D_1300065363. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-APR-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97853 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44223 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.380 REMARK 200 RESOLUTION RANGE LOW (A) : 35.090 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 200 DATA REDUNDANCY : 9.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.38 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.47 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.27 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.88 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 6000,SODIUM CACODYLATE,CALCIUM REMARK 280 ACETATE,GLYCEROL, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.91050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 64.91050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 46.89750 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 91.18550 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 46.89750 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 91.18550 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 64.91050 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 46.89750 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 91.18550 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 64.91050 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 46.89750 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 91.18550 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 ALA A 2 REMARK 465 LEU A 214 REMARK 465 LYS A 215 REMARK 465 VAL A 216 REMARK 465 SER A 217 REMARK 465 LEU A 218 REMARK 465 ASP A 219 REMARK 465 GLY B 1 REMARK 465 ALA B 2 REMARK 465 MET B 3 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 3 CG SD CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 657 O HOH B 677 2.00 REMARK 500 O HOH A 677 O HOH A 707 2.12 REMARK 500 O HOH A 605 O HOH A 708 2.14 REMARK 500 O HOH B 648 O HOH B 671 2.15 REMARK 500 O LEU A 293 O HOH A 601 2.17 REMARK 500 OG SER A 408 O HOH A 602 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LYS B 6 CD LYS B 6 CE 0.159 REMARK 500 LYS B 239 CB LYS B 239 CG 0.169 REMARK 500 LYS B 239 CG LYS B 239 CD 0.244 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 SER A 250 C - N - CA ANGL. DEV. = 16.5 DEGREES REMARK 500 LYS B 6 CD - CE - NZ ANGL. DEV. = 21.0 DEGREES REMARK 500 LYS B 239 CA - CB - CG ANGL. DEV. = 14.2 DEGREES REMARK 500 LYS B 239 CD - CE - NZ ANGL. DEV. = 14.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 37 43.44 -87.43 REMARK 500 PHE A 71 50.05 -95.12 REMARK 500 ASP A 188 100.10 -165.32 REMARK 500 GLU A 245 -145.65 58.67 REMARK 500 PHE B 71 50.96 -90.05 REMARK 500 ASP B 188 102.83 -165.94 REMARK 500 ASP B 219 83.76 63.40 REMARK 500 LYS B 239 -76.43 -12.71 REMARK 500 VAL B 301 38.73 -142.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LEU B 238 LYS B 239 149.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 195 0.13 SIDE CHAIN REMARK 500 ARG B 16 0.29 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF1 9XGT A 5 428 UNP A0A890VZR5_ECHPU DBREF2 9XGT A A0A890VZR5 1 424 DBREF1 9XGT B 5 428 UNP A0A890VZR5_ECHPU DBREF2 9XGT B A0A890VZR5 1 424 SEQADV 9XGT GLY A 1 UNP A0A890VZR EXPRESSION TAG SEQADV 9XGT ALA A 2 UNP A0A890VZR EXPRESSION TAG SEQADV 9XGT MET A 3 UNP A0A890VZR EXPRESSION TAG SEQADV 9XGT GLY A 4 UNP A0A890VZR EXPRESSION TAG SEQADV 9XGT GLY B 1 UNP A0A890VZR EXPRESSION TAG SEQADV 9XGT ALA B 2 UNP A0A890VZR EXPRESSION TAG SEQADV 9XGT MET B 3 UNP A0A890VZR EXPRESSION TAG SEQADV 9XGT GLY B 4 UNP A0A890VZR EXPRESSION TAG SEQRES 1 A 428 GLY ALA MET GLY MET LYS VAL VAL VAL ARG GLU SER THR SEQRES 2 A 428 VAL VAL ARG PRO ALA GLU GLU SER PRO PRO ARG LYS LEU SEQRES 3 A 428 TRP ASN SER SER LEU ASP LEU THR ASN LEU ASN GLY HIS SEQRES 4 A 428 THR LEU VAL VAL TYR PHE TYR ARG PRO ASN GLY ALA SER SEQRES 5 A 428 ASP PHE PHE ASN THR LYS LEU MET LYS ASP THR LEU SER SEQRES 6 A 428 ARG MET LEU VAL ALA PHE TYR PRO PHE ALA GLY ARG PHE SEQRES 7 A 428 LYS TYR ASP GLN HIS GLY ARG VAL GLU THR ASP CYS GLN SEQRES 8 A 428 GLY GLN GLY ALA LEU PHE LEU GLU ALA GLU SER ASP GLY SEQRES 9 A 428 LEU ILE ASP ASP PHE GLY ASP PHE LEU PRO THR LEU GLU SEQRES 10 A 428 TYR LEU LYS LEU ILE PRO ALA ILE ASP TYR SER LYS GLY SEQRES 11 A 428 ILE ASP SER PHE PRO LEU MET VAL PHE GLN VAL THR PHE SEQRES 12 A 428 PHE LYS CYS GLY GLY VAL SER LEU GLY VAL GLY MET HIS SEQRES 13 A 428 HIS HIS LEU VAL ASP GLY MET SER GLY LEU HIS PHE THR SEQRES 14 A 428 ASN THR TRP ALA ASP MET THR ARG GLY LEU ASP ILE THR SEQRES 15 A 428 LEU PRO PRO PHE ILE ASP ARG THR LEU LEU ARG PRO ARG SEQRES 16 A 428 ASP PRO PRO ARG PRO VAL PHE GLU HIS ILE GLU TYR GLN SEQRES 17 A 428 SER ASP PRO THR PRO LEU LYS VAL SER LEU ASP GLU THR SEQRES 18 A 428 LYS THR SER PHE SER MET PHE LYS LEU THR ARG ASN GLN SEQRES 19 A 428 LEU ALA LEU LEU LYS GLU LYS ALA LYS GLU GLU GLY ASN SEQRES 20 A 428 LYS ILE SER TYR THR THR PHE GLU MET PHE SER ALA HIS SEQRES 21 A 428 VAL TRP LYS CYS VAL CYS LYS ALA ARG GLY LEU PRO ASP SEQRES 22 A 428 ASP VAL GLU THR LYS LEU TYR LEU PRO VAL ASP GLY ARG SEQRES 23 A 428 ALA ARG LEU GLN PRO PRO LEU PRO PRO GLY TYR PHE GLY SEQRES 24 A 428 ASN VAL ILE PHE ASP ALA ALA VAL ILE ALA THR ALA GLY SEQRES 25 A 428 ASP ILE LYS SER LYS PRO ILE TRP TYR ALA ALA GLY LYS SEQRES 26 A 428 ILE HIS ASP SER LEU ALA ARG MET ASN ASN ASP TYR LEU SEQRES 27 A 428 ARG SER ALA ILE ASP TYR LEU GLU GLN HIS ASN CYS LYS SEQRES 28 A 428 LYS PRO TYR VAL ASP TYR ASN THR ASN LEU ARG ILE ASN SEQRES 29 A 428 SER TRP ALA ARG LEU PRO ILE HIS ASP ALA ASP PHE GLY SEQRES 30 A 428 TRP GLY ARG PRO ILE PHE MET GLY ARG THR GLY LEU PRO SEQRES 31 A 428 SER VAL GLY ARG VAL TYR VAL LEU PRO SER ALA MET ASP SEQRES 32 A 428 ASP GLY SER LEU SER ILE ILE LEU GLY LEU GLU ALA GLU SEQRES 33 A 428 GLU MET LYS VAL PHE GLY ASN LEU LEU TYR ALA ILE SEQRES 1 B 428 GLY ALA MET GLY MET LYS VAL VAL VAL ARG GLU SER THR SEQRES 2 B 428 VAL VAL ARG PRO ALA GLU GLU SER PRO PRO ARG LYS LEU SEQRES 3 B 428 TRP ASN SER SER LEU ASP LEU THR ASN LEU ASN GLY HIS SEQRES 4 B 428 THR LEU VAL VAL TYR PHE TYR ARG PRO ASN GLY ALA SER SEQRES 5 B 428 ASP PHE PHE ASN THR LYS LEU MET LYS ASP THR LEU SER SEQRES 6 B 428 ARG MET LEU VAL ALA PHE TYR PRO PHE ALA GLY ARG PHE SEQRES 7 B 428 LYS TYR ASP GLN HIS GLY ARG VAL GLU THR ASP CYS GLN SEQRES 8 B 428 GLY GLN GLY ALA LEU PHE LEU GLU ALA GLU SER ASP GLY SEQRES 9 B 428 LEU ILE ASP ASP PHE GLY ASP PHE LEU PRO THR LEU GLU SEQRES 10 B 428 TYR LEU LYS LEU ILE PRO ALA ILE ASP TYR SER LYS GLY SEQRES 11 B 428 ILE ASP SER PHE PRO LEU MET VAL PHE GLN VAL THR PHE SEQRES 12 B 428 PHE LYS CYS GLY GLY VAL SER LEU GLY VAL GLY MET HIS SEQRES 13 B 428 HIS HIS LEU VAL ASP GLY MET SER GLY LEU HIS PHE THR SEQRES 14 B 428 ASN THR TRP ALA ASP MET THR ARG GLY LEU ASP ILE THR SEQRES 15 B 428 LEU PRO PRO PHE ILE ASP ARG THR LEU LEU ARG PRO ARG SEQRES 16 B 428 ASP PRO PRO ARG PRO VAL PHE GLU HIS ILE GLU TYR GLN SEQRES 17 B 428 SER ASP PRO THR PRO LEU LYS VAL SER LEU ASP GLU THR SEQRES 18 B 428 LYS THR SER PHE SER MET PHE LYS LEU THR ARG ASN GLN SEQRES 19 B 428 LEU ALA LEU LEU LYS GLU LYS ALA LYS GLU GLU GLY ASN SEQRES 20 B 428 LYS ILE SER TYR THR THR PHE GLU MET PHE SER ALA HIS SEQRES 21 B 428 VAL TRP LYS CYS VAL CYS LYS ALA ARG GLY LEU PRO ASP SEQRES 22 B 428 ASP VAL GLU THR LYS LEU TYR LEU PRO VAL ASP GLY ARG SEQRES 23 B 428 ALA ARG LEU GLN PRO PRO LEU PRO PRO GLY TYR PHE GLY SEQRES 24 B 428 ASN VAL ILE PHE ASP ALA ALA VAL ILE ALA THR ALA GLY SEQRES 25 B 428 ASP ILE LYS SER LYS PRO ILE TRP TYR ALA ALA GLY LYS SEQRES 26 B 428 ILE HIS ASP SER LEU ALA ARG MET ASN ASN ASP TYR LEU SEQRES 27 B 428 ARG SER ALA ILE ASP TYR LEU GLU GLN HIS ASN CYS LYS SEQRES 28 B 428 LYS PRO TYR VAL ASP TYR ASN THR ASN LEU ARG ILE ASN SEQRES 29 B 428 SER TRP ALA ARG LEU PRO ILE HIS ASP ALA ASP PHE GLY SEQRES 30 B 428 TRP GLY ARG PRO ILE PHE MET GLY ARG THR GLY LEU PRO SEQRES 31 B 428 SER VAL GLY ARG VAL TYR VAL LEU PRO SER ALA MET ASP SEQRES 32 B 428 ASP GLY SER LEU SER ILE ILE LEU GLY LEU GLU ALA GLU SEQRES 33 B 428 GLU MET LYS VAL PHE GLY ASN LEU LEU TYR ALA ILE HET GOL A 501 14 HET GOL B 501 14 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL 2(C3 H8 O3) FORMUL 5 HOH *243(H2 O) HELIX 1 AA1 SER A 29 THR A 34 1 6 HELIX 2 AA2 ASN A 56 PHE A 71 1 16 HELIX 3 AA3 TYR A 72 GLY A 76 5 5 HELIX 4 AA4 LEU A 105 GLY A 110 5 6 HELIX 5 AA5 THR A 115 ILE A 122 5 8 HELIX 6 AA6 ASP A 161 ARG A 177 1 17 HELIX 7 AA7 ASP A 188 ARG A 193 5 6 HELIX 8 AA8 HIS A 204 GLN A 208 5 5 HELIX 9 AA9 THR A 231 LYS A 241 1 11 HELIX 10 AB1 ALA A 242 GLU A 244 5 3 HELIX 11 AB2 THR A 252 GLY A 270 1 19 HELIX 12 AB3 ALA A 311 LYS A 317 1 7 HELIX 13 AB4 PRO A 318 ARG A 332 1 15 HELIX 14 AB5 ASN A 334 HIS A 348 1 15 HELIX 15 AB6 ALA A 415 ALA A 427 1 13 HELIX 16 AB7 SER B 29 THR B 34 1 6 HELIX 17 AB8 ASN B 56 PHE B 71 1 16 HELIX 18 AB9 TYR B 72 GLY B 76 5 5 HELIX 19 AC1 LEU B 105 GLY B 110 5 6 HELIX 20 AC2 THR B 115 ILE B 122 5 8 HELIX 21 AC3 ASP B 161 ARG B 177 1 17 HELIX 22 AC4 ASP B 188 ARG B 193 5 6 HELIX 23 AC5 HIS B 204 GLN B 208 5 5 HELIX 24 AC6 ASP B 219 THR B 221 5 3 HELIX 25 AC7 THR B 231 LYS B 241 1 11 HELIX 26 AC8 ALA B 242 GLU B 244 5 3 HELIX 27 AC9 THR B 252 GLY B 270 1 19 HELIX 28 AD1 ALA B 311 LYS B 317 1 7 HELIX 29 AD2 PRO B 318 ARG B 332 1 15 HELIX 30 AD3 ASN B 334 HIS B 348 1 15 HELIX 31 AD4 ALA B 415 ALA B 427 1 13 SHEET 1 AA1 6 VAL A 7 VAL A 15 0 SHEET 2 AA1 6 ALA A 95 SER A 102 -1 O GLU A 99 N GLU A 11 SHEET 3 AA1 6 MET A 137 PHE A 143 1 O PHE A 139 N LEU A 98 SHEET 4 AA1 6 VAL A 149 HIS A 156 -1 O GLY A 152 N GLN A 140 SHEET 5 AA1 6 HIS A 39 TYR A 46 -1 N TYR A 46 O VAL A 149 SHEET 6 AA1 6 PHE A 383 ARG A 386 -1 O GLY A 385 N VAL A 43 SHEET 1 AA2 3 ARG A 24 LEU A 26 0 SHEET 2 AA2 3 VAL A 86 CYS A 90 -1 O THR A 88 N LEU A 26 SHEET 3 AA2 3 ARG A 77 TYR A 80 -1 N ARG A 77 O ASP A 89 SHEET 1 AA3 6 THR A 223 LEU A 230 0 SHEET 2 AA3 6 LEU A 407 GLU A 414 -1 O LEU A 413 N SER A 224 SHEET 3 AA3 6 ARG A 394 PRO A 399 -1 N TYR A 396 O ILE A 410 SHEET 4 AA3 6 LEU A 361 SER A 365 1 N ASN A 364 O VAL A 395 SHEET 5 AA3 6 GLU A 276 ASP A 284 1 N TYR A 280 O LEU A 361 SHEET 6 AA3 6 ILE A 302 THR A 310 -1 O VAL A 307 N LEU A 279 SHEET 1 AA4 6 VAL B 7 VAL B 15 0 SHEET 2 AA4 6 ALA B 95 SER B 102 -1 O GLU B 99 N ARG B 10 SHEET 3 AA4 6 MET B 137 PHE B 143 1 O VAL B 141 N ALA B 100 SHEET 4 AA4 6 VAL B 149 HIS B 156 -1 O GLY B 152 N GLN B 140 SHEET 5 AA4 6 HIS B 39 TYR B 46 -1 N THR B 40 O MET B 155 SHEET 6 AA4 6 PHE B 383 ARG B 386 -1 O GLY B 385 N VAL B 43 SHEET 1 AA5 3 ARG B 24 LEU B 26 0 SHEET 2 AA5 3 VAL B 86 CYS B 90 -1 O CYS B 90 N ARG B 24 SHEET 3 AA5 3 ARG B 77 TYR B 80 -1 N ARG B 77 O ASP B 89 SHEET 1 AA6 6 THR B 223 LEU B 230 0 SHEET 2 AA6 6 LEU B 407 GLU B 414 -1 O ILE B 409 N PHE B 228 SHEET 3 AA6 6 ARG B 394 PRO B 399 -1 N TYR B 396 O ILE B 410 SHEET 4 AA6 6 LEU B 361 SER B 365 1 N ASN B 364 O VAL B 395 SHEET 5 AA6 6 GLU B 276 ASP B 284 1 N TYR B 280 O LEU B 361 SHEET 6 AA6 6 ILE B 302 THR B 310 -1 O PHE B 303 N VAL B 283 CISPEP 1 GLN A 290 PRO A 291 0 -7.64 CISPEP 2 GLN B 290 PRO B 291 0 -8.03 CRYST1 93.795 182.371 129.821 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010662 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005483 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007703 0.00000 CONECT 6718 6719 6720 6724 6725 CONECT 6719 6718 6726 CONECT 6720 6718 6721 6722 6727 CONECT 6721 6720 6728 CONECT 6722 6720 6723 6729 6730 CONECT 6723 6722 6731 CONECT 6724 6718 CONECT 6725 6718 CONECT 6726 6719 CONECT 6727 6720 CONECT 6728 6721 CONECT 6729 6722 CONECT 6730 6722 CONECT 6731 6723 CONECT 6732 6733 6734 6738 6739 CONECT 6733 6732 6740 CONECT 6734 6732 6735 6736 6741 CONECT 6735 6734 6742 CONECT 6736 6734 6737 6743 6744 CONECT 6737 6736 6745 CONECT 6738 6732 CONECT 6739 6732 CONECT 6740 6733 CONECT 6741 6734 CONECT 6742 6735 CONECT 6743 6736 CONECT 6744 6736 CONECT 6745 6737 MASTER 496 0 2 31 30 0 0 6 6970 2 28 66 END