HEADER SUGAR BINDING PROTEIN 26-AUG-25 9XYT TITLE STRUCTURE OF AN ANCESTRAL GLUCOKINASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: RECONSTRUCTED ANCESTRAL GLUCOKINASE; COMPND 3 CHAIN: B, A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 3 ORGANISM_TAXID: 32630; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS GLUCOKINASE SUGAR KINASE ANCESTRAL, SUGAR BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.KAMALALDINEZABADI,H.LI,B.MILLER REVDAT 1 26-AUG-26 9XYT 0 JRNL AUTH S.S.KAMALALDINEZABADI,J.I.SANTIAGO,J.E.PAPA,Y.WANG, JRNL AUTH 2 P.A.FRANTOM,H.LI,R.SILVERS,A.C.WHITTINGTON,B.G.MILLER JRNL TITL EVOLUTION OF PROTEIN REGULATION IN THE VERTEBRATE GLUCOSE JRNL TITL 2 SENSOR. JRNL REF BIORXIV 2026 JRNL REFN ISSN 2692-8205 JRNL PMID 42146401 JRNL DOI 10.64898/2026.05.05.723016 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.42 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 86.3 REMARK 3 NUMBER OF REFLECTIONS : 57483 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.230 REMARK 3 R VALUE (WORKING SET) : 0.229 REMARK 3 FREE R VALUE : 0.268 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1731 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.4200 - 4.5800 0.99 5634 172 0.1857 0.2122 REMARK 3 2 4.5800 - 3.6300 1.00 5437 175 0.1775 0.2016 REMARK 3 3 3.6300 - 3.1700 1.00 5393 157 0.2207 0.2906 REMARK 3 4 3.1700 - 2.8800 0.99 5344 172 0.2622 0.3252 REMARK 3 5 2.8800 - 2.6800 0.98 5260 167 0.2728 0.3514 REMARK 3 6 2.6800 - 2.5200 0.98 5209 164 0.2740 0.2962 REMARK 3 7 2.5200 - 2.3900 0.97 5218 149 0.3130 0.3725 REMARK 3 8 2.3900 - 2.2900 0.96 5108 169 0.3146 0.3675 REMARK 3 9 2.2900 - 2.2000 0.95 5070 154 0.3291 0.3124 REMARK 3 10 2.2000 - 2.1300 0.86 4595 140 0.3519 0.3792 REMARK 3 11 2.1300 - 2.0600 0.48 2570 76 0.3810 0.4382 REMARK 3 12 2.0600 - 2.0000 0.17 914 36 0.3890 0.4319 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 34.551 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 46.04 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 54.92 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 6763 REMARK 3 ANGLE : 1.282 9095 REMARK 3 CHIRALITY : 0.073 1039 REMARK 3 PLANARITY : 0.013 1172 REMARK 3 DIHEDRAL : 5.200 917 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : ens_1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : chain "A" REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "B" and (resid 19 through 69 or REMARK 3 resid 74 through 94 or resid 106 through REMARK 3 254 or resid 257 through 464)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9XYT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-SEP-25. REMARK 100 THE DEPOSITION ID IS D_1000299210. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-NOV-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X17B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97926 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 66106 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.07 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS-HCL PH=7.5, 25 % W/V PEG REMARK 280 2000 MME, 0.3 M SODIUM ACETATE, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 42.64750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.52600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 46.41550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 61.52600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 42.64750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 46.41550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 1 REMARK 465 HIS B 2 REMARK 465 HIS B 3 REMARK 465 HIS B 4 REMARK 465 HIS B 5 REMARK 465 HIS B 6 REMARK 465 HIS B 7 REMARK 465 GLY B 8 REMARK 465 SER B 9 REMARK 465 GLY B 10 REMARK 465 SER B 11 REMARK 465 MET B 12 REMARK 465 ALA B 13 REMARK 465 SER B 14 REMARK 465 LYS B 15 REMARK 465 GLU B 16 REMARK 465 GLU B 17 REMARK 465 LYS B 18 REMARK 465 GLU B 96 REMARK 465 GLY B 97 REMARK 465 GLU B 98 REMARK 465 LYS B 99 REMARK 465 GLY B 100 REMARK 465 GLU B 101 REMARK 465 GLY B 102 REMARK 465 LYS B 103 REMARK 465 TRP B 104 REMARK 465 MET A 1 REMARK 465 HIS A 2 REMARK 465 HIS A 3 REMARK 465 HIS A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 GLY A 8 REMARK 465 SER A 9 REMARK 465 GLY A 10 REMARK 465 SER A 11 REMARK 465 MET A 12 REMARK 465 ALA A 13 REMARK 465 SER A 14 REMARK 465 LYS A 15 REMARK 465 GLU A 16 REMARK 465 GLU A 17 REMARK 465 LYS A 18 REMARK 465 ASP A 70 REMARK 465 GLY A 71 REMARK 465 THR A 72 REMARK 465 GLU A 73 REMARK 465 LYS A 95 REMARK 465 GLU A 96 REMARK 465 GLY A 97 REMARK 465 GLU A 98 REMARK 465 LYS A 99 REMARK 465 GLY A 100 REMARK 465 GLU A 101 REMARK 465 GLY A 102 REMARK 465 LYS A 103 REMARK 465 TRP A 104 REMARK 465 ASN A 105 REMARK 465 GLU A 255 REMARK 465 PRO A 256 REMARK 465 LYS A 465 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ1 LYS A 145 OD2 ASP A 199 1.39 REMARK 500 O ARG B 362 H GLY B 365 1.49 REMARK 500 O GLY A 303 HG1 THR A 340 1.56 REMARK 500 O GLY B 303 HG1 THR B 340 1.56 REMARK 500 OE2 GLU B 45 O HOH B 501 2.05 REMARK 500 OD1 ASP A 133 NH1 ARG A 197 2.11 REMARK 500 O HOH A 520 O HOH A 529 2.12 REMARK 500 O HOH A 515 O HOH A 522 2.16 REMARK 500 NZ LYS A 145 OD2 ASP A 199 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LYS B 359 CD LYS B 359 CE 0.163 REMARK 500 LYS B 359 CE LYS B 359 NZ 0.156 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LYS B 341 CD - CE - NZ ANGL. DEV. = 19.1 DEGREES REMARK 500 LYS B 359 N - CA - CB ANGL. DEV. = -13.4 DEGREES REMARK 500 LYS B 359 CA - CB - CG ANGL. DEV. = 13.4 DEGREES REMARK 500 LYS B 359 CB - CG - CD ANGL. DEV. = 30.3 DEGREES REMARK 500 LYS B 359 CG - CD - CE ANGL. DEV. = -27.4 DEGREES REMARK 500 GLU A 45 CA - CB - CG ANGL. DEV. = -31.1 DEGREES REMARK 500 GLU A 45 CB - CG - CD ANGL. DEV. = 18.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE B 170 -61.87 -96.05 REMARK 500 SER B 177 29.34 -152.00 REMARK 500 ASP B 224 33.52 -90.62 REMARK 500 ASP B 252 98.68 67.38 REMARK 500 ASN B 257 40.47 -80.84 REMARK 500 ASP B 446 -145.48 60.84 REMARK 500 ILE A 170 -63.80 -95.63 REMARK 500 SER A 177 30.20 -153.32 REMARK 500 ASP A 252 105.77 76.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG B 362 0.15 SIDE CHAIN REMARK 500 GLU A 45 0.14 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 LEU B 358 -11.73 REMARK 500 REMARK 500 REMARK: NULL DBREF 9XYT B 1 465 PDB 9XYT 9XYT 1 465 DBREF 9XYT A 1 465 PDB 9XYT 9XYT 1 465 SEQRES 1 B 465 MET HIS HIS HIS HIS HIS HIS GLY SER GLY SER MET ALA SEQRES 2 B 465 SER LYS GLU GLU LYS VAL ASP LEU ILE LEU ASP GLU PHE SEQRES 3 B 465 HIS LEU ASP ASN ASP THR LEU ASN ASP ILE MET GLY ARG SEQRES 4 B 465 MET HIS LYS GLU MET GLU LYS GLY LEU GLY LYS GLU THR SEQRES 5 B 465 ASN GLU ASP ALA THR VAL LYS MET LEU PRO THR TYR VAL SEQRES 6 B 465 ARG SER LEU PRO ASP GLY THR GLU SER GLY ASP PHE LEU SEQRES 7 B 465 ALA LEU ASP LEU GLY GLY SER ASN PHE ARG VAL LEU LEU SEQRES 8 B 465 VAL LYS ILE LYS GLU GLY GLU LYS GLY GLU GLY LYS TRP SEQRES 9 B 465 ASN VAL GLU MET LYS SER GLN VAL TYR ALA ILE PRO GLU SEQRES 10 B 465 ASP ILE MET THR GLY THR GLY GLU GLN LEU PHE ASP TYR SEQRES 11 B 465 ILE ALA ASP CYS MET ALA GLU PHE LEU GLU LYS LEU GLY SEQRES 12 B 465 MET LYS ASN LYS LYS LEU PRO LEU GLY PHE THR PHE SER SEQRES 13 B 465 PHE PRO CYS LYS GLN ASN GLY LEU ASP SER ALA SER LEU SEQRES 14 B 465 ILE THR TRP THR LYS GLY PHE SER ALA SER GLY VAL GLU SEQRES 15 B 465 GLY GLU ASP VAL VAL LYS LEU LEU ARG ASP ALA ILE LYS SEQRES 16 B 465 ARG ARG GLY ASP PHE ASP MET ASP ILE VAL ALA VAL VAL SEQRES 17 B 465 ASN ASP THR VAL GLY THR MET MET SER CYS ALA PHE ALA SEQRES 18 B 465 ASP HIS ASP CYS LEU ILE GLY LEU ILE VAL GLY THR GLY SEQRES 19 B 465 SER ASN ALA CYS TYR MET GLU LYS LEU ASP ASN VAL GLU SEQRES 20 B 465 LEU TRP GLU GLY ASP ARG GLY GLU PRO ASN GLN MET VAL SEQRES 21 B 465 VAL ASN MET GLU TRP GLY ALA PHE GLY ASP ASP GLY ALA SEQRES 22 B 465 LEU GLU ASP LEU ARG THR GLU TYR ASP ARG GLU ILE ASP SEQRES 23 B 465 GLU HIS SER LEU ASN LYS GLY GLN GLN LEU TYR GLU LYS SEQRES 24 B 465 MET ILE SER GLY MET TYR MET GLY GLU LEU VAL ARG LEU SEQRES 25 B 465 VAL LEU LEU LYS LEU THR LYS GLU GLY LEU LEU PHE GLY SEQRES 26 B 465 GLY LYS THR SER GLU GLU LEU GLN THR ARG GLY THR PHE SEQRES 27 B 465 GLN THR LYS TYR VAL SER GLU ILE GLU GLU ASP VAL SER SEQRES 28 B 465 SER ASP MET THR ALA THR LEU LYS ILE LEU ARG SER LEU SEQRES 29 B 465 GLY LEU LYS ALA THR GLU ALA ASP CYS GLU VAL VAL ARG SEQRES 30 B 465 GLU VAL CYS ARG ALA VAL SER THR ARG ALA ALA HIS LEU SEQRES 31 B 465 VAL SER ALA GLY ILE ALA ALA VAL VAL ASN LYS MET GLY SEQRES 32 B 465 ARG GLU ARG ILE THR VAL GLY VAL ASP GLY SER VAL TYR SEQRES 33 B 465 LYS TYR HIS PRO HIS PHE LYS GLU LEU MET SER GLN THR SEQRES 34 B 465 VAL ASP GLU LEU THR PRO HIS CYS ASP VAL LYS PHE MET SEQRES 35 B 465 LEU SER GLU ASP GLY SER GLY LYS GLY ALA ALA LEU ILE SEQRES 36 B 465 THR ALA VAL ALA CYS ARG LEU ALA GLY LYS SEQRES 1 A 465 MET HIS HIS HIS HIS HIS HIS GLY SER GLY SER MET ALA SEQRES 2 A 465 SER LYS GLU GLU LYS VAL ASP LEU ILE LEU ASP GLU PHE SEQRES 3 A 465 HIS LEU ASP ASN ASP THR LEU ASN ASP ILE MET GLY ARG SEQRES 4 A 465 MET HIS LYS GLU MET GLU LYS GLY LEU GLY LYS GLU THR SEQRES 5 A 465 ASN GLU ASP ALA THR VAL LYS MET LEU PRO THR TYR VAL SEQRES 6 A 465 ARG SER LEU PRO ASP GLY THR GLU SER GLY ASP PHE LEU SEQRES 7 A 465 ALA LEU ASP LEU GLY GLY SER ASN PHE ARG VAL LEU LEU SEQRES 8 A 465 VAL LYS ILE LYS GLU GLY GLU LYS GLY GLU GLY LYS TRP SEQRES 9 A 465 ASN VAL GLU MET LYS SER GLN VAL TYR ALA ILE PRO GLU SEQRES 10 A 465 ASP ILE MET THR GLY THR GLY GLU GLN LEU PHE ASP TYR SEQRES 11 A 465 ILE ALA ASP CYS MET ALA GLU PHE LEU GLU LYS LEU GLY SEQRES 12 A 465 MET LYS ASN LYS LYS LEU PRO LEU GLY PHE THR PHE SER SEQRES 13 A 465 PHE PRO CYS LYS GLN ASN GLY LEU ASP SER ALA SER LEU SEQRES 14 A 465 ILE THR TRP THR LYS GLY PHE SER ALA SER GLY VAL GLU SEQRES 15 A 465 GLY GLU ASP VAL VAL LYS LEU LEU ARG ASP ALA ILE LYS SEQRES 16 A 465 ARG ARG GLY ASP PHE ASP MET ASP ILE VAL ALA VAL VAL SEQRES 17 A 465 ASN ASP THR VAL GLY THR MET MET SER CYS ALA PHE ALA SEQRES 18 A 465 ASP HIS ASP CYS LEU ILE GLY LEU ILE VAL GLY THR GLY SEQRES 19 A 465 SER ASN ALA CYS TYR MET GLU LYS LEU ASP ASN VAL GLU SEQRES 20 A 465 LEU TRP GLU GLY ASP ARG GLY GLU PRO ASN GLN MET VAL SEQRES 21 A 465 VAL ASN MET GLU TRP GLY ALA PHE GLY ASP ASP GLY ALA SEQRES 22 A 465 LEU GLU ASP LEU ARG THR GLU TYR ASP ARG GLU ILE ASP SEQRES 23 A 465 GLU HIS SER LEU ASN LYS GLY GLN GLN LEU TYR GLU LYS SEQRES 24 A 465 MET ILE SER GLY MET TYR MET GLY GLU LEU VAL ARG LEU SEQRES 25 A 465 VAL LEU LEU LYS LEU THR LYS GLU GLY LEU LEU PHE GLY SEQRES 26 A 465 GLY LYS THR SER GLU GLU LEU GLN THR ARG GLY THR PHE SEQRES 27 A 465 GLN THR LYS TYR VAL SER GLU ILE GLU GLU ASP VAL SER SEQRES 28 A 465 SER ASP MET THR ALA THR LEU LYS ILE LEU ARG SER LEU SEQRES 29 A 465 GLY LEU LYS ALA THR GLU ALA ASP CYS GLU VAL VAL ARG SEQRES 30 A 465 GLU VAL CYS ARG ALA VAL SER THR ARG ALA ALA HIS LEU SEQRES 31 A 465 VAL SER ALA GLY ILE ALA ALA VAL VAL ASN LYS MET GLY SEQRES 32 A 465 ARG GLU ARG ILE THR VAL GLY VAL ASP GLY SER VAL TYR SEQRES 33 A 465 LYS TYR HIS PRO HIS PHE LYS GLU LEU MET SER GLN THR SEQRES 34 A 465 VAL ASP GLU LEU THR PRO HIS CYS ASP VAL LYS PHE MET SEQRES 35 A 465 LEU SER GLU ASP GLY SER GLY LYS GLY ALA ALA LEU ILE SEQRES 36 A 465 THR ALA VAL ALA CYS ARG LEU ALA GLY LYS FORMUL 3 HOH *109(H2 O) HELIX 1 AA1 VAL B 19 GLU B 25 1 7 HELIX 2 AA2 ASP B 29 GLY B 49 1 21 HELIX 3 AA3 PRO B 116 THR B 121 1 6 HELIX 4 AA4 THR B 123 GLY B 143 1 21 HELIX 5 AA5 ASP B 185 GLY B 198 1 14 HELIX 6 AA6 ASN B 209 PHE B 220 1 12 HELIX 7 AA7 ASP B 244 VAL B 246 5 3 HELIX 8 AA8 GLU B 264 PHE B 268 5 5 HELIX 9 AA9 THR B 279 HIS B 288 1 10 HELIX 10 AB1 GLN B 295 SER B 302 1 8 HELIX 11 AB2 TYR B 305 GLU B 320 1 16 HELIX 12 AB3 LEU B 323 LYS B 327 5 5 HELIX 13 AB4 GLN B 339 ASP B 349 1 11 HELIX 14 AB5 MET B 354 LEU B 364 1 11 HELIX 15 AB6 THR B 369 GLY B 403 1 35 HELIX 16 AB7 GLY B 413 HIS B 419 1 7 HELIX 17 AB8 HIS B 421 THR B 434 1 14 HELIX 18 AB9 GLY B 449 GLY B 464 1 16 HELIX 19 AC1 ASP A 20 ASP A 24 1 5 HELIX 20 AC2 GLU A 25 HIS A 27 5 3 HELIX 21 AC3 ASP A 29 GLY A 49 1 21 HELIX 22 AC4 PRO A 116 THR A 121 1 6 HELIX 23 AC5 THR A 123 GLY A 143 1 21 HELIX 24 AC6 ASP A 185 GLY A 198 1 14 HELIX 25 AC7 ASN A 209 PHE A 220 1 12 HELIX 26 AC8 ASP A 244 VAL A 246 5 3 HELIX 27 AC9 GLU A 264 PHE A 268 5 5 HELIX 28 AD1 THR A 279 HIS A 288 1 10 HELIX 29 AD2 GLN A 295 SER A 302 1 8 HELIX 30 AD3 TYR A 305 GLU A 320 1 16 HELIX 31 AD4 LEU A 323 LYS A 327 5 5 HELIX 32 AD5 SER A 329 THR A 334 1 6 HELIX 33 AD6 GLN A 339 ASP A 349 1 11 HELIX 34 AD7 MET A 354 LEU A 364 1 11 HELIX 35 AD8 THR A 369 GLY A 403 1 35 HELIX 36 AD9 GLY A 413 HIS A 419 1 7 HELIX 37 AE1 HIS A 421 THR A 434 1 14 HELIX 38 AE2 GLY A 449 GLY A 464 1 16 SHEET 1 AA1 6 LEU B 61 PRO B 62 0 SHEET 2 AA1 6 GLN B 258 ASN B 262 -1 O ASN B 262 N LEU B 61 SHEET 3 AA1 6 SER B 235 LYS B 242 -1 N GLU B 241 O MET B 259 SHEET 4 AA1 6 CYS B 225 VAL B 231 -1 N ILE B 230 O ASN B 236 SHEET 5 AA1 6 ARG B 406 ASP B 412 1 O GLY B 410 N LEU B 229 SHEET 6 AA1 6 ASP B 438 LEU B 443 1 O LYS B 440 N VAL B 409 SHEET 1 AA2 5 GLU B 107 ALA B 114 0 SHEET 2 AA2 5 ASN B 86 ILE B 94 -1 N LYS B 93 O GLU B 107 SHEET 3 AA2 5 GLY B 75 LEU B 82 -1 N PHE B 77 O VAL B 92 SHEET 4 AA2 5 LEU B 149 PHE B 155 1 O PRO B 150 N LEU B 78 SHEET 5 AA2 5 MET B 202 VAL B 208 1 O ALA B 206 N PHE B 153 SHEET 1 AA3 2 CYS B 159 GLY B 163 0 SHEET 2 AA3 2 SER B 166 LEU B 169 -1 O SER B 168 N LYS B 160 SHEET 1 AA4 6 LEU A 61 PRO A 62 0 SHEET 2 AA4 6 GLN A 258 ASN A 262 -1 O ASN A 262 N LEU A 61 SHEET 3 AA4 6 SER A 235 LYS A 242 -1 N GLU A 241 O MET A 259 SHEET 4 AA4 6 CYS A 225 VAL A 231 -1 N ILE A 230 O ASN A 236 SHEET 5 AA4 6 ARG A 406 ASP A 412 1 O GLY A 410 N LEU A 229 SHEET 6 AA4 6 ASP A 438 LEU A 443 1 O LYS A 440 N VAL A 409 SHEET 1 AA5 5 GLU A 107 ALA A 114 0 SHEET 2 AA5 5 ASN A 86 ILE A 94 -1 N LEU A 91 O LYS A 109 SHEET 3 AA5 5 GLY A 75 LEU A 82 -1 N PHE A 77 O VAL A 92 SHEET 4 AA5 5 LEU A 149 PHE A 155 1 O PRO A 150 N LEU A 78 SHEET 5 AA5 5 MET A 202 VAL A 208 1 O ALA A 206 N PHE A 153 SHEET 1 AA6 2 CYS A 159 GLY A 163 0 SHEET 2 AA6 2 SER A 166 LEU A 169 -1 O SER A 168 N LYS A 160 SSBOND 1 CYS B 218 CYS B 225 1555 1555 2.04 SSBOND 2 CYS A 218 CYS A 225 1555 1555 2.03 CISPEP 1 GLU B 255 PRO B 256 0 -20.81 CRYST1 85.295 92.831 123.052 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011724 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010772 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008127 0.00000 MTRIX1 1 -0.999297 0.037028 0.005937 -81.07184 1 MTRIX2 1 0.037125 0.954421 0.296145 0.14597 1 MTRIX3 1 0.005299 0.296157 -0.955124 7.72753 1 CONECT 2946 3038 CONECT 3038 2946 CONECT 9587 9678 CONECT 9678 9587 MASTER 409 0 0 38 26 0 0 9 6783 2 4 72 END