HEADER IMMUNE SYSTEM 28-AUG-25 9Y0D TITLE CRYSTAL STRUCTURE OF HUMAN IGE FAB 2H22 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HIGE FAB 2H22 HEAVY CHAIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: HIGE FAB 2H22 LIGHT CHAIN; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: CHINESE HAMSTER; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 13 EXPRESSION_SYSTEM_COMMON: CHINESE HAMSTER; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 10029 KEYWDS ALLERGEN, IGE, IGE FAB, ALLERGEN-ANTIBODY COMPLEX, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR A.O'MALLEY,B.T.BORDERS,S.A.SMITH,M.CHRUSZCZ REVDAT 1 11-FEB-26 9Y0D 0 JRNL AUTH A.O'MALLEY,B.T.BORDERS,J.M.WILSON,S.A.SMITH,M.CHRUSZCZ JRNL TITL STRUCTURAL DETERMINATION OF A HUMAN IGE EPITOPE ON MAJOR JRNL TITL 2 BIRCH ALLERGEN BET V 1. JRNL REF ALLERGY 2026 JRNL REFN ESSN 1398-9995 JRNL PMID 41622586 JRNL DOI 10.1111/ALL.70240 REMARK 2 REMARK 2 RESOLUTION. 2.27 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0425 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.27 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.02 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 25366 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.687 REMARK 3 FREE R VALUE TEST SET COUNT : 1189 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.27 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.33 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1693 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.57 REMARK 3 BIN R VALUE (WORKING SET) : 0.2420 REMARK 3 BIN FREE R VALUE SET COUNT : 85 REMARK 3 BIN FREE R VALUE : 0.2680 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3220 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 35 REMARK 3 SOLVENT ATOMS : 167 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 79.42 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.46200 REMARK 3 B22 (A**2) : 0.46200 REMARK 3 B33 (A**2) : -1.50000 REMARK 3 B12 (A**2) : 0.23100 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.247 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.212 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.163 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.936 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.924 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3337 ; 0.003 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 3031 ; 0.010 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4561 ; 0.991 ; 1.785 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7036 ; 0.440 ; 1.710 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 434 ; 7.252 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 7 ; 7.285 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 481 ;10.972 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 522 ; 0.055 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3886 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 706 ; 0.005 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 495 ; 0.191 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 56 ; 0.200 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1583 ; 0.171 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 143 ; 0.215 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1745 ; 2.127 ; 5.454 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1745 ; 2.127 ; 5.454 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2176 ; 3.332 ; 9.787 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2177 ; 3.331 ; 9.788 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1592 ; 2.398 ; 5.686 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1593 ; 2.397 ; 5.689 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2385 ; 3.689 ;10.333 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2386 ; 3.688 ;10.335 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 124 REMARK 3 ORIGIN FOR THE GROUP (A): 1.1370 32.2470 -11.9200 REMARK 3 T TENSOR REMARK 3 T11: 0.0219 T22: 0.0907 REMARK 3 T33: 0.5232 T12: -0.0087 REMARK 3 T13: -0.0406 T23: 0.0116 REMARK 3 L TENSOR REMARK 3 L11: 2.9647 L22: 2.2064 REMARK 3 L33: 2.5783 L12: 0.3753 REMARK 3 L13: -0.3060 L23: -0.4423 REMARK 3 S TENSOR REMARK 3 S11: 0.0149 S12: 0.3268 S13: 0.1171 REMARK 3 S21: -0.1465 S22: -0.0479 S23: -0.1620 REMARK 3 S31: -0.0860 S32: 0.3096 S33: 0.0330 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 125 A 226 REMARK 3 ORIGIN FOR THE GROUP (A): 28.4930 46.8320 -3.0200 REMARK 3 T TENSOR REMARK 3 T11: 0.3363 T22: 0.2372 REMARK 3 T33: 0.6204 T12: -0.2581 REMARK 3 T13: -0.0151 T23: 0.0976 REMARK 3 L TENSOR REMARK 3 L11: 4.1102 L22: 2.7448 REMARK 3 L33: 3.0121 L12: -1.6071 REMARK 3 L13: -0.6596 L23: -0.9434 REMARK 3 S TENSOR REMARK 3 S11: -0.1516 S12: 0.1680 S13: 0.0817 REMARK 3 S21: -0.0493 S22: 0.1917 S23: -0.0719 REMARK 3 S31: -0.1960 S32: 0.1751 S33: -0.0401 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 0 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 ORIGIN FOR THE GROUP (A): -3.2990 31.0330 9.6980 REMARK 3 T TENSOR REMARK 3 T11: 0.0123 T22: 0.0188 REMARK 3 T33: 0.5248 T12: -0.0007 REMARK 3 T13: -0.0365 T23: -0.0093 REMARK 3 L TENSOR REMARK 3 L11: 3.3807 L22: 0.5211 REMARK 3 L33: 1.8044 L12: 0.6608 REMARK 3 L13: 1.7451 L23: 0.1463 REMARK 3 S TENSOR REMARK 3 S11: -0.0287 S12: -0.1606 S13: 0.1778 REMARK 3 S21: -0.0115 S22: -0.0954 S23: 0.0561 REMARK 3 S31: -0.1028 S32: -0.0254 S33: 0.1241 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 0 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 ORIGIN FOR THE GROUP (A): 25.0510 57.6370 8.5280 REMARK 3 T TENSOR REMARK 3 T11: 0.3709 T22: 0.1248 REMARK 3 T33: 0.7809 T12: -0.2045 REMARK 3 T13: -0.0043 T23: 0.0239 REMARK 3 L TENSOR REMARK 3 L11: 2.5225 L22: 3.0108 REMARK 3 L33: 3.0588 L12: 1.2547 REMARK 3 L13: -1.6393 L23: -1.0110 REMARK 3 S TENSOR REMARK 3 S11: 0.2746 S12: -0.2676 S13: 0.5421 REMARK 3 S21: 0.0333 S22: -0.1220 S23: -0.2259 REMARK 3 S31: -0.8491 S32: 0.4857 S33: -0.1525 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL PLUS MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 9Y0D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-AUG-25. REMARK 100 THE DEPOSITION ID IS D_1000299604. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-FEB-25 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 3.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MAX IV REMARK 200 BEAMLINE : BIOMAX REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.729 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25393 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.270 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 11.10 REMARK 200 R MERGE (I) : 0.14400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 47.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.27 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.31 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 12.20 REMARK 200 R MERGE FOR SHELL (I) : 0.91100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M CITRIC ACID PH 3.5; 25% PEG REMARK 280 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.40133 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 23.70067 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 35.55100 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 11.85033 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 59.25167 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4270 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19730 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 140 REMARK 465 SER A 141 REMARK 465 THR A 142 REMARK 465 CYS A 227 REMARK 465 CYS B 215 REMARK 465 SER B 216 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 225 CG CD CE NZ REMARK 470 LYS B 160 CG CD CE NZ REMARK 470 ARG B 193 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 214 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 15 -16.59 84.81 REMARK 500 ASN A 103 -168.08 -119.75 REMARK 500 ASP A 112 127.45 -171.87 REMARK 500 SER A 138 119.00 -160.91 REMARK 500 ASP A 155 76.48 58.15 REMARK 500 ASN B 28 -86.74 -112.07 REMARK 500 ASN B 52 -45.71 79.67 REMARK 500 ASN B 53 12.33 -149.21 REMARK 500 SER B 68 -162.97 -101.44 REMARK 500 THR B 91 -169.89 -162.43 REMARK 500 ALA B 134 110.17 -160.90 REMARK 500 PRO B 145 175.32 -56.24 REMARK 500 ASP B 155 -112.54 52.64 REMARK 500 REMARK 500 REMARK: NULL DBREF 9Y0D A 1 227 PDB 9Y0D 9Y0D 1 227 DBREF 9Y0D B 1 216 PDB 9Y0D 9Y0D 1 216 SEQRES 1 A 227 GLU VAL GLN LEU GLN GLU SER GLY PRO GLY LEU VAL LYS SEQRES 2 A 227 PRO SER GLU THR LEU SER LEU THR CYS THR VAL SER GLY SEQRES 3 A 227 GLY SER ILE SER THR ASN GLY TYR TYR TRP GLY TRP ILE SEQRES 4 A 227 ARG GLN PRO PRO GLY LYS GLY LEU ASP TRP ILE GLY SER SEQRES 5 A 227 ILE SER TYR SER GLY ASN THR TYR TYR ASN PRO SER LEU SEQRES 6 A 227 GLN SER ARG VAL SER ILE SER VAL ASP THR SER LYS LYS SEQRES 7 A 227 GLN PHE SER LEU LYS LEU SER SER VAL THR ALA SER ASP SEQRES 8 A 227 THR ALA VAL TYR TYR CYS ALA ARG HIS GLY ALA ASN TRP SEQRES 9 A 227 GLU GLY VAL VAL GLY TRP PHE ASP PRO TRP GLY GLN GLY SEQRES 10 A 227 THR LEU VAL THR VAL SER SER ALA SER THR LYS GLY PRO SEQRES 11 A 227 SER VAL PHE PRO LEU ALA PRO SER SER LYS SER THR SER SEQRES 12 A 227 GLY GLY THR ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR SEQRES 13 A 227 PHE PRO GLU PRO VAL THR VAL SER TRP ASN SER GLY ALA SEQRES 14 A 227 LEU THR SER GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SEQRES 15 A 227 SER SER GLY LEU TYR SER LEU SER SER VAL VAL THR VAL SEQRES 16 A 227 PRO SER SER SER LEU GLY THR GLN THR TYR ILE CYS ASN SEQRES 17 A 227 VAL ASN HIS LYS PRO SER ASN THR LYS VAL ASP LYS LYS SEQRES 18 A 227 VAL GLU PRO LYS SER CYS SEQRES 1 B 216 GLN SER VAL LEU PRO GLN PRO PRO SER VAL SER ALA ALA SEQRES 2 B 216 PRO GLY GLN ASN VAL THR ILE SER CYS SER GLY SER ILE SEQRES 3 B 216 SER ASN ILE GLY ASN ASN TYR VAL SER TRP TYR GLN ARG SEQRES 4 B 216 LEU PRO GLY THR ALA PRO LYS LEU LEU ILE TYR GLY ASN SEQRES 5 B 216 ASN ASN ARG PRO SER GLY ILE PRO ASP ARG PHE SER GLY SEQRES 6 B 216 SER LYS SER ALA THR SER ALA THR LEU GLY ILE THR GLY SEQRES 7 B 216 LEU GLN ALA GLY ASP GLU ALA VAL TYR TYR CYS GLY THR SEQRES 8 B 216 TRP ASP SER SER LEU ARG ALA GLY VAL PHE GLY GLY GLY SEQRES 9 B 216 THR GLN LEU THR VAL LEU GLY GLN PRO LYS ALA ALA PRO SEQRES 10 B 216 SER VAL THR LEU PHE PRO PRO SER SER GLU GLU LEU GLN SEQRES 11 B 216 ALA ASN LYS ALA THR LEU VAL CYS LEU ILE SER ASP PHE SEQRES 12 B 216 TYR PRO GLY ALA VAL THR VAL ALA TRP LYS ALA ASP SER SEQRES 13 B 216 SER PRO VAL LYS ALA GLY VAL GLU THR THR THR PRO SER SEQRES 14 B 216 LYS GLN SER ASN ASN LYS TYR ALA ALA SER SER TYR LEU SEQRES 15 B 216 SER LEU THR PRO GLU GLN TRP LYS SER HIS ARG SER TYR SEQRES 16 B 216 SER CYS GLN VAL THR HIS GLU GLY SER THR VAL GLU LYS SEQRES 17 B 216 THR VAL ALA PRO THR GLU CYS SER HET PEG A 301 7 HET PEG B 301 7 HET NAG B 302 14 HET PEG B 303 7 HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 3 PEG 3(C4 H10 O3) FORMUL 5 NAG C8 H15 N O6 FORMUL 7 HOH *167(H2 O) HELIX 1 AA1 LEU A 65 SER A 67 5 3 HELIX 2 AA2 THR A 75 LYS A 77 5 3 HELIX 3 AA3 THR A 88 THR A 92 5 5 HELIX 4 AA4 SER A 167 ALA A 169 5 3 HELIX 5 AA5 SER A 198 GLY A 201 5 4 HELIX 6 AA6 LYS A 212 ASN A 215 5 4 HELIX 7 AA7 GLN B 80 GLU B 84 5 5 HELIX 8 AA8 SER B 125 ALA B 131 1 7 HELIX 9 AA9 THR B 185 HIS B 192 1 8 SHEET 1 AA1 4 GLN A 3 SER A 7 0 SHEET 2 AA1 4 LEU A 18 SER A 25 -1 O SER A 25 N GLN A 3 SHEET 3 AA1 4 GLN A 79 LEU A 84 -1 O LEU A 84 N LEU A 18 SHEET 4 AA1 4 VAL A 69 ASP A 74 -1 N ASP A 74 O GLN A 79 SHEET 1 AA2 6 LEU A 11 VAL A 12 0 SHEET 2 AA2 6 THR A 118 VAL A 122 1 O THR A 121 N VAL A 12 SHEET 3 AA2 6 ALA A 93 HIS A 100 -1 N TYR A 95 O THR A 118 SHEET 4 AA2 6 TYR A 35 GLN A 41 -1 N ILE A 39 O TYR A 96 SHEET 5 AA2 6 ASP A 48 SER A 54 -1 O GLY A 51 N TRP A 38 SHEET 6 AA2 6 THR A 59 TYR A 61 -1 O TYR A 60 N SER A 52 SHEET 1 AA3 4 LEU A 11 VAL A 12 0 SHEET 2 AA3 4 THR A 118 VAL A 122 1 O THR A 121 N VAL A 12 SHEET 3 AA3 4 ALA A 93 HIS A 100 -1 N TYR A 95 O THR A 118 SHEET 4 AA3 4 PHE A 111 TRP A 114 -1 O ASP A 112 N ARG A 99 SHEET 1 AA4 4 SER A 131 LEU A 135 0 SHEET 2 AA4 4 THR A 146 TYR A 156 -1 O LEU A 152 N PHE A 133 SHEET 3 AA4 4 TYR A 187 PRO A 196 -1 O TYR A 187 N TYR A 156 SHEET 4 AA4 4 VAL A 174 THR A 176 -1 N HIS A 175 O VAL A 192 SHEET 1 AA5 4 SER A 131 LEU A 135 0 SHEET 2 AA5 4 THR A 146 TYR A 156 -1 O LEU A 152 N PHE A 133 SHEET 3 AA5 4 TYR A 187 PRO A 196 -1 O TYR A 187 N TYR A 156 SHEET 4 AA5 4 VAL A 180 LEU A 181 -1 N VAL A 180 O SER A 188 SHEET 1 AA6 3 THR A 162 TRP A 165 0 SHEET 2 AA6 3 ILE A 206 HIS A 211 -1 O ASN A 208 N SER A 164 SHEET 3 AA6 3 THR A 216 LYS A 221 -1 O VAL A 218 N VAL A 209 SHEET 1 AA7 5 VAL B 3 LEU B 4 0 SHEET 2 AA7 5 ALA B 98 GLY B 102 1 O PHE B 101 N LEU B 4 SHEET 3 AA7 5 ALA B 85 ASP B 93 -1 N ASP B 93 O ALA B 98 SHEET 4 AA7 5 THR B 105 VAL B 109 -1 O LEU B 107 N ALA B 85 SHEET 5 AA7 5 SER B 9 ALA B 12 1 N VAL B 10 O THR B 108 SHEET 1 AA8 5 VAL B 3 LEU B 4 0 SHEET 2 AA8 5 ALA B 98 GLY B 102 1 O PHE B 101 N LEU B 4 SHEET 3 AA8 5 ALA B 85 ASP B 93 -1 N ASP B 93 O ALA B 98 SHEET 4 AA8 5 SER B 35 ARG B 39 -1 N ARG B 39 O VAL B 86 SHEET 5 AA8 5 LYS B 46 ILE B 49 -1 O LEU B 48 N TRP B 36 SHEET 1 AA9 3 VAL B 18 SER B 23 0 SHEET 2 AA9 3 SER B 71 ILE B 76 -1 O LEU B 74 N ILE B 20 SHEET 3 AA9 3 PHE B 63 LYS B 67 -1 N SER B 66 O THR B 73 SHEET 1 AB1 4 SER B 118 PHE B 122 0 SHEET 2 AB1 4 ALA B 134 PHE B 143 -1 O LEU B 139 N THR B 120 SHEET 3 AB1 4 TYR B 176 LEU B 184 -1 O ALA B 178 N ILE B 140 SHEET 4 AB1 4 VAL B 163 THR B 165 -1 N GLU B 164 O TYR B 181 SHEET 1 AB2 4 SER B 118 PHE B 122 0 SHEET 2 AB2 4 ALA B 134 PHE B 143 -1 O LEU B 139 N THR B 120 SHEET 3 AB2 4 TYR B 176 LEU B 184 -1 O ALA B 178 N ILE B 140 SHEET 4 AB2 4 SER B 169 LYS B 170 -1 N SER B 169 O ALA B 177 SHEET 1 AB3 4 SER B 157 PRO B 158 0 SHEET 2 AB3 4 THR B 149 ALA B 154 -1 N ALA B 154 O SER B 157 SHEET 3 AB3 4 TYR B 195 HIS B 201 -1 O THR B 200 N THR B 149 SHEET 4 AB3 4 SER B 204 VAL B 210 -1 O VAL B 206 N VAL B 199 SSBOND 1 CYS A 22 CYS A 97 1555 1555 2.50 SSBOND 2 CYS A 151 CYS A 207 1555 1555 2.25 SSBOND 3 CYS B 22 CYS B 89 1555 1555 2.22 SSBOND 4 CYS B 138 CYS B 197 1555 1555 2.14 LINK ND2 ASN B 17 C1 NAG B 302 1555 1555 1.48 CISPEP 1 ASP A 112 PRO A 113 0 -4.30 CISPEP 2 PHE A 157 PRO A 158 0 -2.86 CISPEP 3 GLU A 159 PRO A 160 0 -2.16 CISPEP 4 TYR B 144 PRO B 145 0 -6.78 CRYST1 116.769 116.769 71.102 90.00 90.00 120.00 P 65 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008564 0.004944 0.000000 0.00000 SCALE2 0.000000 0.009889 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014064 0.00000 CONECT 160 738 CONECT 738 160 CONECT 1095 1509 CONECT 1509 1095 CONECT 1773 3237 CONECT 1807 2305 CONECT 2305 1807 CONECT 2655 3099 CONECT 3099 2655 CONECT 3223 3224 3225 CONECT 3224 3223 CONECT 3225 3223 3226 CONECT 3226 3225 3227 CONECT 3227 3226 3228 CONECT 3228 3227 3229 CONECT 3229 3228 CONECT 3230 3231 3232 CONECT 3231 3230 CONECT 3232 3230 3233 CONECT 3233 3232 3234 CONECT 3234 3233 3235 CONECT 3235 3234 3236 CONECT 3236 3235 CONECT 3237 1773 3238 3248 CONECT 3238 3237 3239 3245 CONECT 3239 3238 3240 3246 CONECT 3240 3239 3241 3247 CONECT 3241 3240 3242 3248 CONECT 3242 3241 3249 CONECT 3243 3244 3245 3250 CONECT 3244 3243 CONECT 3245 3238 3243 CONECT 3246 3239 CONECT 3247 3240 CONECT 3248 3237 3241 CONECT 3249 3242 CONECT 3250 3243 CONECT 3251 3252 3253 CONECT 3252 3251 CONECT 3253 3251 3254 CONECT 3254 3253 3255 CONECT 3255 3254 3256 CONECT 3256 3255 3257 CONECT 3257 3256 MASTER 370 0 4 9 50 0 0 6 3422 2 44 35 END