data_9Y3B # _entry.id 9Y3B # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.406 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9Y3B pdb_00009y3b 10.2210/pdb9y3b/pdb WWPDB D_1000299766 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2025-11-05 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9Y3B _pdbx_database_status.recvd_initial_deposition_date 2025-09-02 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 4 _pdbx_contact_author.email rs17@nyu.edu _pdbx_contact_author.name_first Ruojie _pdbx_contact_author.name_last Sha _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-0807-734X # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Horvath, A.' 1 0009-0008-5770-8014 'Woloszyn, K.' 2 0000-0003-1200-583X 'Vecchioni, S.' 3 0000-0001-8243-650X 'Ohayon, Y.P.' 4 0000-0001-7500-4282 'Sha, R.' 5 0000-0002-0807-734X # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Blunt-End Tensegrity Triangles' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Horvath, A.' 1 0009-0008-5770-8014 primary 'Woloszyn, K.' 2 0000-0003-1200-583X primary 'Vecchioni, S.' 3 0000-0001-8243-650X primary 'Ohayon, Y.P.' 4 0000-0001-7500-4282 primary 'Sha, R.' 5 0000-0002-0807-734X # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*CP*CP*TP*GP*AP*CP*CP*TP*GP*GP*CP*AP*GP*GP*AP*CP*GP*TP*AP*CP*T)-3') ; 6424.148 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(*CP*TP*GP*AP*TP*GP*TP*GP*GP*TP*CP*AP*GP*G)-3') ; 4351.826 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(*AP*GP*TP*AP*CP*GP*TP*GP*GP*CP*AP*TP*CP*G)-3') ; 4320.815 1 ? ? ? ? 4 polymer syn ;DNA (5'-D(*CP*GP*AP*TP*GP*CP*CP*TP*GP*AP*TP*CP*GP*GP*AP*CP*AP*TP*AP*GP*A)-3') ; 6472.199 1 ? ? ? ? 5 polymer syn ;DNA (5'-D(*TP*CP*TP*AP*TP*GP*TP*GP*GP*TP*CP*GP*CP*T)-3') ; 4277.774 1 ? ? ? ? 6 polymer syn ;DNA (5'-D(*GP*AP*GP*CP*GP*AP*CP*CP*TP*GP*TP*AP*CP*GP*GP*AP*CP*AP*TP*CP*A)-3') ; 6457.188 1 ? ? ? ? 7 polymer syn ;DNA (5'-D(*TP*AP*CP*AP*CP*CP*GP*AP*TP*CP*AP*CP*CP*TP*GP*CP*CP*AP*CP*CP*G)-3') ; 6313.090 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no ;(DC)(DC)(DT)(DG)(DA)(DC)(DC)(DT)(DG)(DG)(DC)(DA)(DG)(DG)(DA)(DC)(DG)(DT)(DA)(DC) (DT) ; CCTGACCTGGCAGGACGTACT A ? 2 polydeoxyribonucleotide no no '(DC)(DT)(DG)(DA)(DT)(DG)(DT)(DG)(DG)(DT)(DC)(DA)(DG)(DG)' CTGATGTGGTCAGG E ? 3 polydeoxyribonucleotide no no '(DA)(DG)(DT)(DA)(DC)(DG)(DT)(DG)(DG)(DC)(DA)(DT)(DC)(DG)' AGTACGTGGCATCG D ? 4 polydeoxyribonucleotide no no ;(DC)(DG)(DA)(DT)(DG)(DC)(DC)(DT)(DG)(DA)(DT)(DC)(DG)(DG)(DA)(DC)(DA)(DT)(DA)(DG) (DA) ; CGATGCCTGATCGGACATAGA B ? 5 polydeoxyribonucleotide no no '(DT)(DC)(DT)(DA)(DT)(DG)(DT)(DG)(DG)(DT)(DC)(DG)(DC)(DT)' TCTATGTGGTCGCT F ? 6 polydeoxyribonucleotide no no ;(DG)(DA)(DG)(DC)(DG)(DA)(DC)(DC)(DT)(DG)(DT)(DA)(DC)(DG)(DG)(DA)(DC)(DA)(DT)(DC) (DA) ; GAGCGACCTGTACGGACATCA C ? 7 polydeoxyribonucleotide no no ;(DT)(DA)(DC)(DA)(DC)(DC)(DG)(DA)(DT)(DC)(DA)(DC)(DC)(DT)(DG)(DC)(DC)(DA)(DC)(DC) (DG) ; TACACCGATCACCTGCCACCG M ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DC n 1 3 DT n 1 4 DG n 1 5 DA n 1 6 DC n 1 7 DC n 1 8 DT n 1 9 DG n 1 10 DG n 1 11 DC n 1 12 DA n 1 13 DG n 1 14 DG n 1 15 DA n 1 16 DC n 1 17 DG n 1 18 DT n 1 19 DA n 1 20 DC n 1 21 DT n 2 1 DC n 2 2 DT n 2 3 DG n 2 4 DA n 2 5 DT n 2 6 DG n 2 7 DT n 2 8 DG n 2 9 DG n 2 10 DT n 2 11 DC n 2 12 DA n 2 13 DG n 2 14 DG n 3 1 DA n 3 2 DG n 3 3 DT n 3 4 DA n 3 5 DC n 3 6 DG n 3 7 DT n 3 8 DG n 3 9 DG n 3 10 DC n 3 11 DA n 3 12 DT n 3 13 DC n 3 14 DG n 4 1 DC n 4 2 DG n 4 3 DA n 4 4 DT n 4 5 DG n 4 6 DC n 4 7 DC n 4 8 DT n 4 9 DG n 4 10 DA n 4 11 DT n 4 12 DC n 4 13 DG n 4 14 DG n 4 15 DA n 4 16 DC n 4 17 DA n 4 18 DT n 4 19 DA n 4 20 DG n 4 21 DA n 5 1 DT n 5 2 DC n 5 3 DT n 5 4 DA n 5 5 DT n 5 6 DG n 5 7 DT n 5 8 DG n 5 9 DG n 5 10 DT n 5 11 DC n 5 12 DG n 5 13 DC n 5 14 DT n 6 1 DG n 6 2 DA n 6 3 DG n 6 4 DC n 6 5 DG n 6 6 DA n 6 7 DC n 6 8 DC n 6 9 DT n 6 10 DG n 6 11 DT n 6 12 DA n 6 13 DC n 6 14 DG n 6 15 DG n 6 16 DA n 6 17 DC n 6 18 DA n 6 19 DT n 6 20 DC n 6 21 DA n 7 1 DT n 7 2 DA n 7 3 DC n 7 4 DA n 7 5 DC n 7 6 DC n 7 7 DG n 7 8 DA n 7 9 DT n 7 10 DC n 7 11 DA n 7 12 DC n 7 13 DC n 7 14 DT n 7 15 DG n 7 16 DC n 7 17 DC n 7 18 DA n 7 19 DC n 7 20 DC n 7 21 DG n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 21 'synthetic construct' ? 32630 ? 2 1 sample 1 14 'synthetic construct' ? 32630 ? 3 1 sample 1 14 'synthetic construct' ? 32630 ? 4 1 sample 1 21 'synthetic construct' ? 32630 ? 5 1 sample 1 14 'synthetic construct' ? 32630 ? 6 1 sample 1 21 'synthetic construct' ? 32630 ? 7 1 sample 1 21 'synthetic construct' ? 32630 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 102 102 DC DC A . n A 1 2 DC 2 103 103 DC DC A . n A 1 3 DT 3 104 104 DT DT A . n A 1 4 DG 4 105 105 DG DG A . n A 1 5 DA 5 106 106 DA DA A . n A 1 6 DC 6 107 107 DC DC A . n A 1 7 DC 7 108 108 DC DC A . n A 1 8 DT 8 109 109 DT DT A . n A 1 9 DG 9 110 110 DG DG A . n A 1 10 DG 10 111 111 DG DG A . n A 1 11 DC 11 112 112 DC DC A . n A 1 12 DA 12 113 113 DA DA A . n A 1 13 DG 13 114 114 DG DG A . n A 1 14 DG 14 115 115 DG DG A . n A 1 15 DA 15 116 116 DA DA A . n A 1 16 DC 16 117 117 DC DC A . n A 1 17 DG 17 118 118 DG DG A . n A 1 18 DT 18 119 119 DT DT A . n A 1 19 DA 19 120 120 DA DA A . n A 1 20 DC 20 121 121 DC DC A . n A 1 21 DT 21 122 122 DT DT A . n B 2 1 DC 1 102 102 DC DC E . n B 2 2 DT 2 103 103 DT DT E . n B 2 3 DG 3 104 104 DG DG E . n B 2 4 DA 4 105 105 DA DA E . n B 2 5 DT 5 106 106 DT DT E . n B 2 6 DG 6 107 107 DG DG E . n B 2 7 DT 7 108 108 DT DT E . n B 2 8 DG 8 109 109 DG DG E . n B 2 9 DG 9 110 110 DG DG E . n B 2 10 DT 10 111 111 DT DT E . n B 2 11 DC 11 112 112 DC DC E . n B 2 12 DA 12 113 113 DA DA E . n B 2 13 DG 13 114 114 DG DG E . n B 2 14 DG 14 115 115 DG DG E . n C 3 1 DA 1 102 102 DA DA D . n C 3 2 DG 2 103 103 DG DG D . n C 3 3 DT 3 104 104 DT DT D . n C 3 4 DA 4 105 105 DA DA D . n C 3 5 DC 5 106 106 DC DC D . n C 3 6 DG 6 107 107 DG DG D . n C 3 7 DT 7 108 108 DT DT D . n C 3 8 DG 8 109 109 DG DG D . n C 3 9 DG 9 110 110 DG DG D . n C 3 10 DC 10 111 111 DC DC D . n C 3 11 DA 11 112 112 DA DA D . n C 3 12 DT 12 113 113 DT DT D . n C 3 13 DC 13 114 114 DC DC D . n C 3 14 DG 14 115 115 DG DG D . n D 4 1 DC 1 102 102 DC DC B . n D 4 2 DG 2 103 103 DG DG B . n D 4 3 DA 3 104 104 DA DA B . n D 4 4 DT 4 105 105 DT DT B . n D 4 5 DG 5 106 106 DG DG B . n D 4 6 DC 6 107 107 DC DC B . n D 4 7 DC 7 108 108 DC DC B . n D 4 8 DT 8 109 109 DT DT B . n D 4 9 DG 9 110 110 DG DG B . n D 4 10 DA 10 111 111 DA DA B . n D 4 11 DT 11 112 112 DT DT B . n D 4 12 DC 12 113 113 DC DC B . n D 4 13 DG 13 114 114 DG DG B . n D 4 14 DG 14 115 115 DG DG B . n D 4 15 DA 15 116 116 DA DA B . n D 4 16 DC 16 117 117 DC DC B . n D 4 17 DA 17 118 118 DA DA B . n D 4 18 DT 18 119 119 DT DT B . n D 4 19 DA 19 120 120 DA DA B . n D 4 20 DG 20 121 121 DG DG B . n D 4 21 DA 21 122 122 DA DA B . n E 5 1 DT 1 102 102 DT DT F . n E 5 2 DC 2 103 103 DC DC F . n E 5 3 DT 3 104 104 DT DT F . n E 5 4 DA 4 105 105 DA DA F . n E 5 5 DT 5 106 106 DT DT F . n E 5 6 DG 6 107 107 DG DG F . n E 5 7 DT 7 108 108 DT DT F . n E 5 8 DG 8 109 109 DG DG F . n E 5 9 DG 9 110 110 DG DG F . n E 5 10 DT 10 111 111 DT DT F . n E 5 11 DC 11 112 112 DC DC F . n E 5 12 DG 12 113 113 DG DG F . n E 5 13 DC 13 114 114 DC DC F . n E 5 14 DT 14 115 115 DT DT F . n F 6 1 DG 1 101 101 DG DG C . n F 6 2 DA 2 102 102 DA DA C . n F 6 3 DG 3 103 103 DG DG C . n F 6 4 DC 4 104 104 DC DC C . n F 6 5 DG 5 105 105 DG DG C . n F 6 6 DA 6 106 106 DA DA C . n F 6 7 DC 7 107 107 DC DC C . n F 6 8 DC 8 108 108 DC DC C . n F 6 9 DT 9 109 109 DT DT C . n F 6 10 DG 10 110 110 DG DG C . n F 6 11 DT 11 111 111 DT DT C . n F 6 12 DA 12 112 112 DA DA C . n F 6 13 DC 13 113 113 DC DC C . n F 6 14 DG 14 114 114 DG DG C . n F 6 15 DG 15 115 115 DG DG C . n F 6 16 DA 16 116 116 DA DA C . n F 6 17 DC 17 117 117 DC DC C . n F 6 18 DA 18 118 118 DA DA C . n F 6 19 DT 19 119 119 DT DT C . n F 6 20 DC 20 120 120 DC DC C . n F 6 21 DA 21 121 121 DA DA C . n G 7 1 DT 1 101 101 DT DT M . n G 7 2 DA 2 102 102 DA DA M . n G 7 3 DC 3 103 103 DC DC M . n G 7 4 DA 4 104 104 DA DA M . n G 7 5 DC 5 105 105 DC DC M . n G 7 6 DC 6 106 106 DC DC M . n G 7 7 DG 7 107 107 DG DG M . n G 7 8 DA 8 108 108 DA DA M . n G 7 9 DT 9 109 109 DT DT M . n G 7 10 DC 10 110 110 DC DC M . n G 7 11 DA 11 111 111 DA DA M . n G 7 12 DC 12 112 112 DC DC M . n G 7 13 DC 13 113 113 DC DC M . n G 7 14 DT 14 114 114 DT DT M . n G 7 15 DG 15 115 115 DG DG M . n G 7 16 DC 16 116 116 DC DC M . n G 7 17 DC 17 117 117 DC DC M . n G 7 18 DA 18 118 118 DA DA M . n G 7 19 DC 19 119 119 DC DC M . n G 7 20 DC 20 120 120 DC DC M . n G 7 21 DG 21 121 121 DG DG M . n # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_reference_DOI _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1_4487 ? 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? autoPROC ? ? ? . ? 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? STARANISO ? ? ? . ? 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . ? 4 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 9Y3B _cell.details ? _cell.formula_units_Z ? _cell.length_a 88.743 _cell.length_a_esd ? _cell.length_b 104.798 _cell.length_b_esd ? _cell.length_c 264.190 _cell.length_c_esd ? _cell.volume 2456990.490 _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9Y3B _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall 'C 2c 2' _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9Y3B _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 7.95 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details '338-293 at 0.4/hr' _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '100 mM MOPS, 1.25 M magnesium sulfate' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 9M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2022-11-13 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 17-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.00000 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 17-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 32.02 _reflns.entry_id 9Y3B _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 6.13 _reflns.d_resolution_low 65.602 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 1342 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 79.0 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 9.9 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 4.5 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.716 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_percent_possible_ellipsoidal _reflns_shell.pdbx_percent_possible_spherical _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous _reflns_shell.pdbx_percent_possible_spherical_anomalous _reflns_shell.pdbx_redundancy_anomalous _reflns_shell.pdbx_CC_half_anomalous _reflns_shell.pdbx_absDiff_over_sigma_anomalous _reflns_shell.pdbx_percent_possible_anomalous 6.135 7.588 ? ? ? ? ? ? 192 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 1 1 0.788 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 15.823 65.602 ? ? ? ? ? ? 191 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 0.686 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 236.85 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9Y3B _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 6.13 _refine.ls_d_res_low 48.71 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 1322 _refine.ls_number_reflns_R_free 56 _refine.ls_number_reflns_R_work 1266 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 42.80 _refine.ls_percent_reflns_R_free 4.24 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.3012 _refine.ls_R_factor_R_free 0.3571 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2987 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 40.0829 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 1.3437 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 6.13 _refine_hist.d_res_low 48.71 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2562 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 2562 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_Zscore _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0040 ? 2870 ? f_bond_d ? ? ? 'X-RAY DIFFRACTION' ? 0.5978 ? 4417 ? f_angle_d ? ? ? 'X-RAY DIFFRACTION' ? 0.0303 ? 497 ? f_chiral_restr ? ? ? 'X-RAY DIFFRACTION' ? 0.0034 ? 126 ? f_plane_restr ? ? ? 'X-RAY DIFFRACTION' ? 37.4830 ? 1232 ? f_dihedral_angle_d ? ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 6.13 _refine_ls_shell.d_res_low 48.71 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 56 _refine_ls_shell.number_reflns_R_work 1266 _refine_ls_shell.percent_reflns_obs 42.80 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.2987 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.correlation_coeff_Fo_to_Fc ? _refine_ls_shell.correlation_coeff_Fo_to_Fc_free ? _refine_ls_shell.correlation_coeff_I_to_Fcsqd_work ? _refine_ls_shell.correlation_coeff_I_to_Fcsqd_free ? _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? _refine_ls_shell.R_factor_R_free 0.3571 # _struct.entry_id 9Y3B _struct.title '[21-7B-001] 21 bp tensegrity triangle that propagates via blunt-end stacking on two sides and via sticky-end cohesion on one side' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9Y3B _struct_keywords.text 'dna, tensegrity triangle, stacking, blunt' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 7 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 9Y3B 9Y3B ? 1 ? 1 2 PDB 9Y3B 9Y3B ? 2 ? 1 3 PDB 9Y3B 9Y3B ? 3 ? 1 4 PDB 9Y3B 9Y3B ? 4 ? 1 5 PDB 9Y3B 9Y3B ? 5 ? 1 6 PDB 9Y3B 9Y3B ? 6 ? 1 7 PDB 9Y3B 9Y3B ? 7 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9Y3B A 1 ? 21 ? 9Y3B 102 ? 122 ? 102 122 2 2 9Y3B E 1 ? 14 ? 9Y3B 102 ? 115 ? 102 115 3 3 9Y3B D 1 ? 14 ? 9Y3B 102 ? 115 ? 102 115 4 4 9Y3B B 1 ? 21 ? 9Y3B 102 ? 122 ? 102 122 5 5 9Y3B F 1 ? 14 ? 9Y3B 102 ? 115 ? 102 115 6 6 9Y3B C 1 ? 21 ? 9Y3B 101 ? 121 ? 101 121 7 7 9Y3B M 1 ? 21 ? 9Y3B 101 ? 121 ? 101 121 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details heptameric _pdbx_struct_assembly.oligomeric_count 7 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 7980 ? 1 MORE -37 ? 1 'SSA (A^2)' 21350 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'native gel electrophoresis' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 14 N1 ? ? A DC 102 E DG 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 14 O6 ? ? A DC 102 E DG 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 14 N2 ? ? A DC 102 E DG 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B DG 13 N1 ? ? A DC 103 E DG 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 13 O6 ? ? A DC 103 E DG 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DG 13 N2 ? ? A DC 103 E DG 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DT 3 N3 ? ? ? 1_555 B DA 12 N1 ? ? A DT 104 E DA 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DT 3 O4 ? ? ? 1_555 B DA 12 N6 ? ? A DT 104 E DA 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 11 N3 ? ? A DG 105 E DC 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 11 O2 ? ? A DG 105 E DC 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 11 N4 ? ? A DG 105 E DC 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DA 5 N1 ? ? ? 1_555 B DT 10 N3 ? ? A DA 106 E DT 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DA 5 N6 ? ? ? 1_555 B DT 10 O4 ? ? A DA 106 E DT 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 6 N3 ? ? ? 1_555 B DG 9 N1 ? ? A DC 107 E DG 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 6 N4 ? ? ? 1_555 B DG 9 O6 ? ? A DC 107 E DG 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 6 O2 ? ? ? 1_555 B DG 9 N2 ? ? A DC 107 E DG 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 7 N3 ? ? ? 1_555 B DG 8 N1 ? ? A DC 108 E DG 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 7 N4 ? ? ? 1_555 B DG 8 O6 ? ? A DC 108 E DG 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 7 O2 ? ? ? 1_555 B DG 8 N2 ? ? A DC 108 E DG 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DT 8 N3 ? ? ? 1_555 G DA 18 N1 ? ? A DT 109 M DA 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DT 8 O4 ? ? ? 1_555 G DA 18 N6 ? ? A DT 109 M DA 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 9 N1 ? ? ? 1_555 G DC 17 N3 ? ? A DG 110 M DC 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 9 N2 ? ? ? 1_555 G DC 17 O2 ? ? A DG 110 M DC 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DG 9 O6 ? ? ? 1_555 G DC 17 N4 ? ? A DG 110 M DC 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DG 10 N1 ? ? ? 1_555 G DC 16 N3 ? ? A DG 111 M DC 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 10 N2 ? ? ? 1_555 G DC 16 O2 ? ? A DG 111 M DC 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DG 10 O6 ? ? ? 1_555 G DC 16 N4 ? ? A DG 111 M DC 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DC 11 N3 ? ? ? 1_555 G DG 15 N1 ? ? A DC 112 M DG 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DC 11 N4 ? ? ? 1_555 G DG 15 O6 ? ? A DC 112 M DG 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DC 11 O2 ? ? ? 1_555 G DG 15 N2 ? ? A DC 112 M DG 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DA 12 N1 ? ? ? 1_555 G DT 14 N3 ? ? A DA 113 M DT 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DA 12 N6 ? ? ? 1_555 G DT 14 O4 ? ? A DA 113 M DT 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DG 13 N1 ? ? ? 1_555 G DC 13 N3 ? ? A DG 114 M DC 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DG 13 N2 ? ? ? 1_555 G DC 13 O2 ? ? A DG 114 M DC 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DG 13 O6 ? ? ? 1_555 G DC 13 N4 ? ? A DG 114 M DC 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DG 14 N1 ? ? ? 1_555 G DC 12 N3 ? ? A DG 115 M DC 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DG 14 N2 ? ? ? 1_555 G DC 12 O2 ? ? A DG 115 M DC 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DG 14 O6 ? ? ? 1_555 G DC 12 N4 ? ? A DG 115 M DC 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DA 15 N1 ? ? ? 1_555 C DT 7 N3 ? ? A DA 116 D DT 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A DA 15 N6 ? ? ? 1_555 C DT 7 O4 ? ? A DA 116 D DT 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A DC 16 N3 ? ? ? 1_555 C DG 6 N1 ? ? A DC 117 D DG 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A DC 16 N4 ? ? ? 1_555 C DG 6 O6 ? ? A DC 117 D DG 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A DC 16 O2 ? ? ? 1_555 C DG 6 N2 ? ? A DC 117 D DG 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A DG 17 N1 ? ? ? 1_555 C DC 5 N3 ? ? A DG 118 D DC 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A DG 17 N2 ? ? ? 1_555 C DC 5 O2 ? ? A DG 118 D DC 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A DG 17 O6 ? ? ? 1_555 C DC 5 N4 ? ? A DG 118 D DC 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A DT 18 N3 ? ? ? 1_555 C DA 4 N1 ? ? A DT 119 D DA 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A DT 18 O4 ? ? ? 1_555 C DA 4 N6 ? ? A DT 119 D DA 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A DA 19 N1 ? ? ? 1_555 C DT 3 N3 ? ? A DA 120 D DT 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A DA 19 N6 ? ? ? 1_555 C DT 3 O4 ? ? A DA 120 D DT 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A DC 20 N3 ? ? ? 1_555 C DG 2 N1 ? ? A DC 121 D DG 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A DC 20 N4 ? ? ? 1_555 C DG 2 O6 ? ? A DC 121 D DG 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A DC 20 O2 ? ? ? 1_555 C DG 2 N2 ? ? A DC 121 D DG 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A DT 21 N3 ? ? ? 1_555 C DA 1 N1 ? ? A DT 122 D DA 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A DT 21 O4 ? ? ? 1_555 C DA 1 N6 ? ? A DT 122 D DA 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? D DT 8 N3 ? ? ? 1_555 G DA 11 N1 ? ? B DT 109 M DA 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? D DT 8 O4 ? ? ? 1_555 G DA 11 N6 ? ? B DT 109 M DA 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? D DG 9 N1 ? ? ? 1_555 G DC 10 N3 ? ? B DG 110 M DC 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? D DG 9 N2 ? ? ? 1_555 G DC 10 O2 ? ? B DG 110 M DC 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? D DG 9 O6 ? ? ? 1_555 G DC 10 N4 ? ? B DG 110 M DC 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? D DA 10 N1 ? ? ? 1_555 G DT 9 N3 ? ? B DA 111 M DT 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? D DA 10 N6 ? ? ? 1_555 G DT 9 O4 ? ? B DA 111 M DT 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? D DT 11 N3 ? ? ? 1_555 G DA 8 N1 ? ? B DT 112 M DA 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? D DT 11 O4 ? ? ? 1_555 G DA 8 N6 ? ? B DT 112 M DA 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? D DC 12 N3 ? ? ? 1_555 G DG 7 N1 ? ? B DC 113 M DG 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? D DC 12 N4 ? ? ? 1_555 G DG 7 O6 ? ? B DC 113 M DG 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? D DC 12 O2 ? ? ? 1_555 G DG 7 N2 ? ? B DC 113 M DG 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? D DG 13 N1 ? ? ? 1_555 G DC 6 N3 ? ? B DG 114 M DC 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? D DG 13 N2 ? ? ? 1_555 G DC 6 O2 ? ? B DG 114 M DC 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? D DG 13 O6 ? ? ? 1_555 G DC 6 N4 ? ? B DG 114 M DC 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? D DG 14 N1 ? ? ? 1_555 G DC 5 N3 ? ? B DG 115 M DC 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? D DG 14 N2 ? ? ? 1_555 G DC 5 O2 ? ? B DG 115 M DC 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? D DG 14 O6 ? ? ? 1_555 G DC 5 N4 ? ? B DG 115 M DC 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? D DA 15 N1 ? ? ? 1_555 E DT 7 N3 ? ? B DA 116 F DT 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? D DA 15 N6 ? ? ? 1_555 E DT 7 O4 ? ? B DA 116 F DT 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? D DC 16 N3 ? ? ? 1_555 E DG 6 N1 ? ? B DC 117 F DG 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? D DC 16 N4 ? ? ? 1_555 E DG 6 O6 ? ? B DC 117 F DG 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? D DC 16 O2 ? ? ? 1_555 E DG 6 N2 ? ? B DC 117 F DG 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? D DA 17 N1 ? ? ? 1_555 E DT 5 N3 ? ? B DA 118 F DT 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? D DA 17 N6 ? ? ? 1_555 E DT 5 O4 ? ? B DA 118 F DT 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? D DT 18 N3 ? ? ? 1_555 E DA 4 N1 ? ? B DT 119 F DA 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? D DT 18 O4 ? ? ? 1_555 E DA 4 N6 ? ? B DT 119 F DA 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? D DA 19 N1 ? ? ? 1_555 E DT 3 N3 ? ? B DA 120 F DT 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? D DA 19 N6 ? ? ? 1_555 E DT 3 O4 ? ? B DA 120 F DT 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? D DG 20 N1 ? ? ? 1_555 E DC 2 N3 ? ? B DG 121 F DC 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? D DG 20 N2 ? ? ? 1_555 E DC 2 O2 ? ? B DG 121 F DC 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? D DG 20 O6 ? ? ? 1_555 E DC 2 N4 ? ? B DG 121 F DC 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? D DA 21 N1 ? ? ? 1_555 E DT 1 N3 ? ? B DA 122 F DT 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? D DA 21 N6 ? ? ? 1_555 E DT 1 O4 ? ? B DA 122 F DT 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog90 hydrog ? ? F DT 9 N3 ? ? ? 1_555 G DA 4 N1 ? ? C DT 109 M DA 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? F DT 9 O4 ? ? ? 1_555 G DA 4 N6 ? ? C DT 109 M DA 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? F DG 10 N1 ? ? ? 1_555 G DC 3 N3 ? ? C DG 110 M DC 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? F DG 10 N2 ? ? ? 1_555 G DC 3 O2 ? ? C DG 110 M DC 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog94 hydrog ? ? F DG 10 O6 ? ? ? 1_555 G DC 3 N4 ? ? C DG 110 M DC 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog95 hydrog ? ? F DT 11 N3 ? ? ? 1_555 G DA 2 N1 ? ? C DT 111 M DA 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog96 hydrog ? ? F DT 11 O4 ? ? ? 1_555 G DA 2 N6 ? ? C DT 111 M DA 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog97 hydrog ? ? F DA 12 N1 ? ? ? 1_555 G DT 1 N3 ? ? C DA 112 M DT 101 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog98 hydrog ? ? F DA 12 N6 ? ? ? 1_555 G DT 1 O4 ? ? C DA 112 M DT 101 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog99 hydrog ? ? F DC 13 N3 ? ? ? 1_555 G DG 21 N1 ? ? C DC 113 M DG 121 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog100 hydrog ? ? F DC 13 N4 ? ? ? 1_555 G DG 21 O6 ? ? C DC 113 M DG 121 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog101 hydrog ? ? F DC 13 O2 ? ? ? 1_555 G DG 21 N2 ? ? C DC 113 M DG 121 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog102 hydrog ? ? F DG 14 N1 ? ? ? 1_555 G DC 20 N3 ? ? C DG 114 M DC 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog103 hydrog ? ? F DG 14 N2 ? ? ? 1_555 G DC 20 O2 ? ? C DG 114 M DC 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog104 hydrog ? ? F DG 14 O6 ? ? ? 1_555 G DC 20 N4 ? ? C DG 114 M DC 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog105 hydrog ? ? F DG 15 N1 ? ? ? 1_555 G DC 19 N3 ? ? C DG 115 M DC 119 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog106 hydrog ? ? F DG 15 N2 ? ? ? 1_555 G DC 19 O2 ? ? C DG 115 M DC 119 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog107 hydrog ? ? F DG 15 O6 ? ? ? 1_555 G DC 19 N4 ? ? C DG 115 M DC 119 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog108 hydrog ? ? C DG 8 N1 ? ? ? 1_555 D DC 7 N3 ? ? D DG 109 B DC 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog109 hydrog ? ? C DG 8 N2 ? ? ? 1_555 D DC 7 O2 ? ? D DG 109 B DC 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog110 hydrog ? ? C DG 8 O6 ? ? ? 1_555 D DC 7 N4 ? ? D DG 109 B DC 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog111 hydrog ? ? C DG 9 N1 ? ? ? 1_555 D DC 6 N3 ? ? D DG 110 B DC 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog112 hydrog ? ? C DG 9 N2 ? ? ? 1_555 D DC 6 O2 ? ? D DG 110 B DC 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog113 hydrog ? ? C DG 9 O6 ? ? ? 1_555 D DC 6 N4 ? ? D DG 110 B DC 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog114 hydrog ? ? C DC 10 N3 ? ? ? 1_555 D DG 5 N1 ? ? D DC 111 B DG 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog115 hydrog ? ? C DC 10 N4 ? ? ? 1_555 D DG 5 O6 ? ? D DC 111 B DG 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog116 hydrog ? ? C DC 10 O2 ? ? ? 1_555 D DG 5 N2 ? ? D DC 111 B DG 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog117 hydrog ? ? C DA 11 N1 ? ? ? 1_555 D DT 4 N3 ? ? D DA 112 B DT 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog118 hydrog ? ? C DA 11 N6 ? ? ? 1_555 D DT 4 O4 ? ? D DA 112 B DT 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog119 hydrog ? ? C DT 12 N3 ? ? ? 1_555 D DA 3 N1 ? ? D DT 113 B DA 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog120 hydrog ? ? C DT 12 O4 ? ? ? 1_555 D DA 3 N6 ? ? D DT 113 B DA 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog121 hydrog ? ? C DC 13 N3 ? ? ? 1_555 D DG 2 N1 ? ? D DC 114 B DG 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog122 hydrog ? ? C DC 13 N4 ? ? ? 1_555 D DG 2 O6 ? ? D DC 114 B DG 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog123 hydrog ? ? C DC 13 O2 ? ? ? 1_555 D DG 2 N2 ? ? D DC 114 B DG 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog124 hydrog ? ? C DG 14 N1 ? ? ? 1_555 D DC 1 N3 ? ? D DG 115 B DC 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog125 hydrog ? ? C DG 14 N2 ? ? ? 1_555 D DC 1 O2 ? ? D DG 115 B DC 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog126 hydrog ? ? C DG 14 O6 ? ? ? 1_555 D DC 1 N4 ? ? D DG 115 B DC 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog127 hydrog ? ? B DT 2 N3 ? ? ? 1_555 F DA 21 N1 ? ? E DT 103 C DA 121 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog128 hydrog ? ? B DT 2 O4 ? ? ? 1_555 F DA 21 N6 ? ? E DT 103 C DA 121 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog129 hydrog ? ? B DG 3 N1 ? ? ? 1_555 F DC 20 N3 ? ? E DG 104 C DC 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog130 hydrog ? ? B DG 3 N2 ? ? ? 1_555 F DC 20 O2 ? ? E DG 104 C DC 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog131 hydrog ? ? B DG 3 O6 ? ? ? 1_555 F DC 20 N4 ? ? E DG 104 C DC 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog132 hydrog ? ? B DA 4 N1 ? ? ? 1_555 F DT 19 N3 ? ? E DA 105 C DT 119 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog133 hydrog ? ? B DA 4 N6 ? ? ? 1_555 F DT 19 O4 ? ? E DA 105 C DT 119 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog134 hydrog ? ? B DT 5 N3 ? ? ? 1_555 F DA 18 N1 ? ? E DT 106 C DA 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog135 hydrog ? ? B DT 5 O4 ? ? ? 1_555 F DA 18 N6 ? ? E DT 106 C DA 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog136 hydrog ? ? B DG 6 N1 ? ? ? 1_555 F DC 17 N3 ? ? E DG 107 C DC 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog137 hydrog ? ? B DG 6 N2 ? ? ? 1_555 F DC 17 O2 ? ? E DG 107 C DC 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog138 hydrog ? ? B DG 6 O6 ? ? ? 1_555 F DC 17 N4 ? ? E DG 107 C DC 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog139 hydrog ? ? B DT 7 N3 ? ? ? 1_555 F DA 16 N1 ? ? E DT 108 C DA 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog140 hydrog ? ? B DT 7 O4 ? ? ? 1_555 F DA 16 N6 ? ? E DT 108 C DA 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog141 hydrog ? ? E DG 8 N1 ? ? ? 1_555 F DC 8 N3 ? ? F DG 109 C DC 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog142 hydrog ? ? E DG 8 N2 ? ? ? 1_555 F DC 8 O2 ? ? F DG 109 C DC 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog143 hydrog ? ? E DG 8 O6 ? ? ? 1_555 F DC 8 N4 ? ? F DG 109 C DC 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog144 hydrog ? ? E DG 9 N1 ? ? ? 1_555 F DC 7 N3 ? ? F DG 110 C DC 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog145 hydrog ? ? E DG 9 N2 ? ? ? 1_555 F DC 7 O2 ? ? F DG 110 C DC 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog146 hydrog ? ? E DG 9 O6 ? ? ? 1_555 F DC 7 N4 ? ? F DG 110 C DC 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog147 hydrog ? ? E DT 10 N3 ? ? ? 1_555 F DA 6 N1 ? ? F DT 111 C DA 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog148 hydrog ? ? E DT 10 O4 ? ? ? 1_555 F DA 6 N6 ? ? F DT 111 C DA 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog149 hydrog ? ? E DC 11 N3 ? ? ? 1_555 F DG 5 N1 ? ? F DC 112 C DG 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog150 hydrog ? ? E DC 11 N4 ? ? ? 1_555 F DG 5 O6 ? ? F DC 112 C DG 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog151 hydrog ? ? E DC 11 O2 ? ? ? 1_555 F DG 5 N2 ? ? F DC 112 C DG 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog152 hydrog ? ? E DG 12 N1 ? ? ? 1_555 F DC 4 N3 ? ? F DG 113 C DC 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog153 hydrog ? ? E DG 12 N2 ? ? ? 1_555 F DC 4 O2 ? ? F DG 113 C DC 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog154 hydrog ? ? E DG 12 O6 ? ? ? 1_555 F DC 4 N4 ? ? F DG 113 C DC 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog155 hydrog ? ? E DC 13 N3 ? ? ? 1_555 F DG 3 N1 ? ? F DC 114 C DG 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog156 hydrog ? ? E DC 13 N4 ? ? ? 1_555 F DG 3 O6 ? ? F DC 114 C DG 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog157 hydrog ? ? E DC 13 O2 ? ? ? 1_555 F DG 3 N2 ? ? F DC 114 C DG 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog158 hydrog ? ? E DT 14 N3 ? ? ? 1_555 F DA 2 N1 ? ? F DT 115 C DA 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog159 hydrog ? ? E DT 14 O4 ? ? ? 1_555 F DA 2 N6 ? ? F DT 115 C DA 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_entry_details.entry_id 9Y3B _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" D DA 105 ? ? "C1'" D DA 105 ? ? N9 D DA 105 ? ? 110.56 108.30 2.26 0.30 N 2 1 "O4'" F DT 111 ? ? "C1'" F DT 111 ? ? N1 F DT 111 ? ? 110.10 108.30 1.80 0.30 N # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 x,-y,-z 3 -x,y,-z+1/2 4 -x,-y,z+1/2 5 x+1/2,y+1/2,z 6 x+1/2,-y+1/2,-z 7 -x+1/2,y+1/2,-z+1/2 8 -x+1/2,-y+1/2,z+1/2 # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined -12.1983276628 -4.81104411636 -33.9846246467 2.11928957673 ? -0.438968067597 ? -0.511629318028 ? 3.1167180197 ? 0.864423088845 ? 1.57105070751 ? 2.02633314382 ? -0.00826518820953 ? -2.21591424899 ? 3.19224383484 ? -0.803048939186 ? 8.55913678831 ? 0.490931627732 ? 0.929485550338 ? -0.32613262892 ? 1.39671689687 ? -0.810361277533 ? 0.114576094764 ? 0.251320609685 ? -0.113821268625 ? 0.233473146042 ? 2 'X-RAY DIFFRACTION' ? refined 2.09021768382 -7.4666896157 -48.0783320877 0.669810030985 ? -1.22357724473 ? -0.231006802063 ? 1.86191498298 ? 0.344990425193 ? 2.64297166211 ? 4.476098582 ? 1.64210301767 ? -0.319568284386 ? 2.1222742062 ? 0.187262067923 ? 2.78264146468 ? 0.592190471356 ? -0.877265489948 ? -0.205289020249 ? 0.457292850594 ? -0.0175488091383 ? -0.265303653793 ? -0.114800845625 ? 1.86014832654 ? -0.465384901511 ? 3 'X-RAY DIFFRACTION' ? refined -26.8124044894 -8.24450291518 -18.036780511 1.04270777026 ? -0.638822003755 ? 0.614719078133 ? 1.07316195507 ? 1.70708818638 ? 3.18418315088 ? 0.611847767268 ? 0.791533102791 ? -0.731316560008 ? 3.66451047214 ? 0.466038036515 ? 2.03812492656 ? -0.286925250057 ? -0.379520325284 ? 0.0140776621036 ? 0.471326012463 ? -1.33820410247 ? 0.740807524706 ? -0.130915574616 ? 0.649694723811 ? 0.743786544748 ? 4 'X-RAY DIFFRACTION' ? refined -21.1777043787 -27.4630880662 -23.1406547334 1.20351593734 ? -1.48302770344 ? -1.14359514526 ? 2.16263986054 ? 0.67413441374 ? 1.76617061054 ? 1.04148028867 ? 0.983529158751 ? 0.907417969569 ? 1.38307280091 ? 0.181806616199 ? 2.52626483026 ? -0.223625358046 ? -0.787949060566 ? 0.121045487893 ? -0.222310234106 ? -0.647750975098 ? 0.109384943736 ? 0.542342675545 ? 1.6297699232 ? 0.245939164359 ? 5 'X-RAY DIFFRACTION' ? refined -11.1025681835 -44.7852932439 -32.5654886326 1.87173345951 ? 1.54894845734 ? 0.120863916474 ? 1.36474188351 ? -0.82173741997 ? 1.32845285295 ? 2.49810269833 ? -0.179356055758 ? -0.98892770407 ? 3.54751530488 ? 2.41570330107 ? 1.80249877297 ? -0.330393450164 ? -0.000114966141464 ? -0.704347720677 ? -0.6370681981 ? 0.281061007145 ? 0.650738756572 ? 0.299611016662 ? -0.364637515432 ? -0.19268706801 ? 6 'X-RAY DIFFRACTION' ? refined -5.79075027477 -31.3563962412 -41.6842986359 0.736112010959 ? -1.05806799629 ? 0.370361392749 ? 1.17154727328 ? 1.91168377195 ? 2.00223415672 ? 1.20909856733 ? -0.917191000059 ? 0.837579425109 ? 0.775129018666 ? -0.205146954033 ? 1.54304744544 ? 0.383589278202 ? 0.949992298188 ? -0.20085870267 ? -0.40775696492 ? 0.747549496391 ? -0.443856615619 ? 0.188879958206 ? 0.788635327776 ? 0.0997961355834 ? 7 'X-RAY DIFFRACTION' ? refined -13.5823300487 -19.5901646819 -33.0683350751 4.77376889209 ? 0.951783986404 ? -0.825843581384 ? 0.608567860413 ? 0.0410979991874 ? 3.151420159 ? 1.79999484895 ? -1.58816008229 ? -0.739941086418 ? 4.03972080427 ? 1.29813773801 ? 0.585766849905 ? -1.05915599992 ? 0.404016967912 ? -2.50261431272 ? -0.989269461733 ? -0.35865604018 ? -1.31671486231 ? 0.152966179946 ? 0.464683592659 ? 1.24436194246 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 A ? A 102 ? A ? A 122 ? ? ;(chain 'A' and resid 102 through 122) ; 2 'X-RAY DIFFRACTION' 2 B ? E 102 ? B ? E 115 ? ? ;(chain 'E' and resid 102 through 115) ; 3 'X-RAY DIFFRACTION' 3 C ? D 102 ? C ? D 115 ? ? ;(chain 'D' and resid 102 through 115) ; 4 'X-RAY DIFFRACTION' 4 D ? B 102 ? D ? B 122 ? ? ;(chain 'B' and resid 102 through 122) ; 5 'X-RAY DIFFRACTION' 5 E ? F 102 ? E ? F 115 ? ? ;(chain 'F' and resid 102 through 115) ; 6 'X-RAY DIFFRACTION' 6 F ? C 101 ? F ? C 121 ? ? ;(chain 'C' and resid 101 through 121) ; 7 'X-RAY DIFFRACTION' 7 G ? M 101 ? G ? M 121 ? ? ;(chain 'M' and resid 101 through 121) ; # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DC OP3 O N N 37 DC P P N N 38 DC OP1 O N N 39 DC OP2 O N N 40 DC "O5'" O N N 41 DC "C5'" C N N 42 DC "C4'" C N R 43 DC "O4'" O N N 44 DC "C3'" C N S 45 DC "O3'" O N N 46 DC "C2'" C N N 47 DC "C1'" C N R 48 DC N1 N N N 49 DC C2 C N N 50 DC O2 O N N 51 DC N3 N N N 52 DC C4 C N N 53 DC N4 N N N 54 DC C5 C N N 55 DC C6 C N N 56 DC HOP3 H N N 57 DC HOP2 H N N 58 DC "H5'" H N N 59 DC "H5''" H N N 60 DC "H4'" H N N 61 DC "H3'" H N N 62 DC "HO3'" H N N 63 DC "H2'" H N N 64 DC "H2''" H N N 65 DC "H1'" H N N 66 DC H41 H N N 67 DC H42 H N N 68 DC H5 H N N 69 DC H6 H N N 70 DG OP3 O N N 71 DG P P N N 72 DG OP1 O N N 73 DG OP2 O N N 74 DG "O5'" O N N 75 DG "C5'" C N N 76 DG "C4'" C N R 77 DG "O4'" O N N 78 DG "C3'" C N S 79 DG "O3'" O N N 80 DG "C2'" C N N 81 DG "C1'" C N R 82 DG N9 N Y N 83 DG C8 C Y N 84 DG N7 N Y N 85 DG C5 C Y N 86 DG C6 C N N 87 DG O6 O N N 88 DG N1 N N N 89 DG C2 C N N 90 DG N2 N N N 91 DG N3 N N N 92 DG C4 C Y N 93 DG HOP3 H N N 94 DG HOP2 H N N 95 DG "H5'" H N N 96 DG "H5''" H N N 97 DG "H4'" H N N 98 DG "H3'" H N N 99 DG "HO3'" H N N 100 DG "H2'" H N N 101 DG "H2''" H N N 102 DG "H1'" H N N 103 DG H8 H N N 104 DG H1 H N N 105 DG H21 H N N 106 DG H22 H N N 107 DT OP3 O N N 108 DT P P N N 109 DT OP1 O N N 110 DT OP2 O N N 111 DT "O5'" O N N 112 DT "C5'" C N N 113 DT "C4'" C N R 114 DT "O4'" O N N 115 DT "C3'" C N S 116 DT "O3'" O N N 117 DT "C2'" C N N 118 DT "C1'" C N R 119 DT N1 N N N 120 DT C2 C N N 121 DT O2 O N N 122 DT N3 N N N 123 DT C4 C N N 124 DT O4 O N N 125 DT C5 C N N 126 DT C7 C N N 127 DT C6 C N N 128 DT HOP3 H N N 129 DT HOP2 H N N 130 DT "H5'" H N N 131 DT "H5''" H N N 132 DT "H4'" H N N 133 DT "H3'" H N N 134 DT "HO3'" H N N 135 DT "H2'" H N N 136 DT "H2''" H N N 137 DT "H1'" H N N 138 DT H3 H N N 139 DT H71 H N N 140 DT H72 H N N 141 DT H73 H N N 142 DT H6 H N N 143 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 9Y3B 'double helix' 9Y3B 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B DG 14 1_555 0.205 -0.124 0.232 1.768 -6.657 0.472 1 A_DC102:DG115_E A 102 ? E 115 ? 19 1 1 A DC 2 1_555 B DG 13 1_555 0.186 -0.134 0.146 -5.790 -7.471 0.907 2 A_DC103:DG114_E A 103 ? E 114 ? 19 1 1 A DT 3 1_555 B DA 12 1_555 -0.093 -0.114 -0.082 -4.405 -3.195 -0.566 3 A_DT104:DA113_E A 104 ? E 113 ? 20 1 1 A DG 4 1_555 B DC 11 1_555 -0.220 -0.122 -0.496 -12.789 -4.915 0.355 4 A_DG105:DC112_E A 105 ? E 112 ? 19 1 1 A DA 5 1_555 B DT 10 1_555 0.166 -0.255 -1.086 -7.716 -1.492 -2.575 5 A_DA106:DT111_E A 106 ? E 111 ? 20 1 1 A DC 6 1_555 B DG 9 1_555 0.182 -0.174 -0.539 -5.233 2.211 0.098 6 A_DC107:DG110_E A 107 ? E 110 ? 19 1 1 A DC 7 1_555 B DG 8 1_555 0.171 -0.128 -0.261 -4.542 -2.858 -0.732 7 A_DC108:DG109_E A 108 ? E 109 ? 19 1 1 A DT 8 1_555 G DA 18 1_555 -0.126 -0.127 0.208 -0.920 -0.500 -1.764 8 A_DT109:DA118_M A 109 ? M 118 ? 20 1 1 A DG 9 1_555 G DC 17 1_555 -0.209 -0.176 0.382 3.364 0.222 0.433 9 A_DG110:DC117_M A 110 ? M 117 ? 19 1 1 A DG 10 1_555 G DC 16 1_555 -0.148 -0.155 0.541 6.905 -4.104 -1.143 10 A_DG111:DC116_M A 111 ? M 116 ? 19 1 1 A DC 11 1_555 G DG 15 1_555 0.182 -0.160 0.214 0.401 -9.484 -0.212 11 A_DC112:DG115_M A 112 ? M 115 ? 19 1 1 A DA 12 1_555 G DT 14 1_555 0.099 -0.133 0.017 -0.573 -9.400 1.745 12 A_DA113:DT114_M A 113 ? M 114 ? 20 1 1 A DG 13 1_555 G DC 13 1_555 -0.252 -0.122 -0.351 -10.083 -11.712 1.110 13 A_DG114:DC113_M A 114 ? M 113 ? 19 1 1 A DG 14 1_555 G DC 12 1_555 -0.176 -0.271 -1.226 -17.419 -4.504 0.429 14 A_DG115:DC112_M A 115 ? M 112 ? 19 1 1 A DA 15 1_555 C DT 7 1_555 0.083 -0.155 -0.008 -0.757 0.898 5.104 15 A_DA116:DT108_D A 116 ? D 108 ? 20 1 1 A DC 16 1_555 C DG 6 1_555 0.174 -0.131 -0.239 -0.395 0.630 -0.609 16 A_DC117:DG107_D A 117 ? D 107 ? 19 1 1 A DG 17 1_555 C DC 5 1_555 -0.193 -0.116 0.107 2.545 -1.887 -0.192 17 A_DG118:DC106_D A 118 ? D 106 ? 19 1 1 A DT 18 1_555 C DA 4 1_555 -0.127 -0.154 0.295 0.453 -1.912 3.637 18 A_DT119:DA105_D A 119 ? D 105 ? 20 1 1 A DA 19 1_555 C DT 3 1_555 0.053 -0.135 -0.188 -2.729 -1.310 2.343 19 A_DA120:DT104_D A 120 ? D 104 ? 20 1 1 A DC 20 1_555 C DG 2 1_555 0.214 -0.162 -0.319 -2.054 -0.124 1.043 20 A_DC121:DG103_D A 121 ? D 103 ? 19 1 1 A DT 21 1_555 C DA 1 1_555 -0.068 -0.138 -0.041 0.346 0.108 1.615 21 A_DT122:DA102_D A 122 ? D 102 ? 20 1 1 B DT 2 1_555 F DA 21 1_555 -0.005 -0.185 0.102 4.210 -0.275 5.581 22 E_DT103:DA121_C E 103 ? C 121 ? 20 1 1 B DG 3 1_555 F DC 20 1_555 -0.193 -0.126 0.265 1.559 -7.875 -0.999 23 E_DG104:DC120_C E 104 ? C 120 ? 19 1 1 B DA 4 1_555 F DT 19 1_555 0.062 -0.123 -0.190 -5.027 -6.516 1.789 24 E_DA105:DT119_C E 105 ? C 119 ? 20 1 1 B DT 5 1_555 F DA 18 1_555 -0.059 -0.171 -0.354 -2.383 -4.739 2.034 25 E_DT106:DA118_C E 106 ? C 118 ? 20 1 1 B DG 6 1_555 F DC 17 1_555 -0.191 -0.128 -0.435 -5.224 -2.202 -0.249 26 E_DG107:DC117_C E 107 ? C 117 ? 19 1 1 B DT 7 1_555 F DA 16 1_555 -0.131 -0.036 -0.029 -1.060 -1.035 -3.642 27 E_DT108:DA116_C E 108 ? C 116 ? 20 1 1 G DC 19 1_555 F DG 15 1_555 0.178 -0.146 0.056 2.144 -7.185 -1.482 28 M_DC119:DG115_C M 119 ? C 115 ? 19 1 1 G DC 20 1_555 F DG 14 1_555 0.170 -0.248 0.928 -4.886 4.654 0.221 29 M_DC120:DG114_C M 120 ? C 114 ? 19 1 1 G DG 21 1_555 F DC 13 1_555 -0.204 -0.144 0.150 1.009 8.223 1.161 30 M_DG121:DC113_C M 121 ? C 113 ? 19 1 1 G DT 1 1_555 F DA 12 1_555 -0.062 -0.184 0.453 -1.193 -10.121 4.311 31 M_DT101:DA112_C M 101 ? C 112 ? 20 1 1 G DA 2 1_555 F DT 11 1_555 0.081 -0.158 -0.223 -4.225 -7.809 1.124 32 M_DA102:DT111_C M 102 ? C 111 ? 20 1 1 G DC 3 1_555 F DG 10 1_555 0.191 -0.133 -0.025 -3.091 -5.251 0.524 33 M_DC103:DG110_C M 103 ? C 110 ? 19 1 1 G DA 4 1_555 F DT 9 1_555 0.115 -0.143 0.570 -2.199 -3.019 -0.078 34 M_DA104:DT109_C M 104 ? C 109 ? 20 1 1 E DG 8 1_555 F DC 8 1_555 -0.206 -0.179 -0.626 -2.738 -4.174 1.566 35 F_DG109:DC108_C F 109 ? C 108 ? 19 1 1 E DG 9 1_555 F DC 7 1_555 -0.200 -0.259 -0.986 -3.457 -4.534 1.289 36 F_DG110:DC107_C F 110 ? C 107 ? 19 1 1 E DT 10 1_555 F DA 6 1_555 -0.041 -0.375 -1.068 -1.619 -6.593 5.200 37 F_DT111:DA106_C F 111 ? C 106 ? 20 1 1 E DC 11 1_555 F DG 5 1_555 0.167 -0.184 -0.406 -3.486 -0.027 -0.782 38 F_DC112:DG105_C F 112 ? C 105 ? 19 1 1 E DG 12 1_555 F DC 4 1_555 -0.222 -0.126 -0.003 -5.178 -9.604 -0.565 39 F_DG113:DC104_C F 113 ? C 104 ? 19 1 1 E DC 13 1_555 F DG 3 1_555 0.198 -0.154 -0.198 -4.393 -7.317 1.218 40 F_DC114:DG103_C F 114 ? C 103 ? 19 1 1 E DT 14 1_555 F DA 2 1_555 -0.071 -0.146 -0.121 -1.339 -6.515 0.642 41 F_DT115:DA102_C F 115 ? C 102 ? 20 1 1 D DC 1 1_555 C DG 14 1_555 0.242 -0.196 -0.716 8.360 -10.308 1.840 42 B_DC102:DG115_D B 102 ? D 115 ? 19 1 1 D DG 2 1_555 C DC 13 1_555 -0.174 -0.129 0.324 -1.953 2.945 -0.178 43 B_DG103:DC114_D B 103 ? D 114 ? 19 1 1 D DA 3 1_555 C DT 12 1_555 0.066 -0.191 0.403 -0.919 1.100 0.789 44 B_DA104:DT113_D B 104 ? D 113 ? 20 1 1 D DT 4 1_555 C DA 11 1_555 -0.079 -0.140 0.467 0.039 -0.031 -1.732 45 B_DT105:DA112_D B 105 ? D 112 ? 20 1 1 D DG 5 1_555 C DC 10 1_555 -0.187 -0.125 0.365 -2.173 -0.548 -0.580 46 B_DG106:DC111_D B 106 ? D 111 ? 19 1 1 D DC 6 1_555 C DG 9 1_555 0.154 -0.183 0.196 -1.427 0.352 -3.021 47 B_DC107:DG110_D B 107 ? D 110 ? 19 1 1 D DC 7 1_555 C DG 8 1_555 0.155 -0.138 0.015 -6.461 3.304 -1.034 48 B_DC108:DG109_D B 108 ? D 109 ? 19 1 1 D DT 8 1_555 G DA 11 1_555 -0.092 -0.086 0.275 0.860 -3.579 -0.413 49 B_DT109:DA111_M B 109 ? M 111 ? 20 1 1 D DG 9 1_555 G DC 10 1_555 -0.196 -0.175 0.462 -7.346 0.179 -0.388 50 B_DG110:DC110_M B 110 ? M 110 ? 19 1 1 D DA 10 1_555 G DT 9 1_555 0.104 -0.137 -0.172 -2.789 -1.152 -1.609 51 B_DA111:DT109_M B 111 ? M 109 ? 20 1 1 D DT 11 1_555 G DA 8 1_555 -0.145 -0.020 -0.001 -0.912 0.536 -7.253 52 B_DT112:DA108_M B 112 ? M 108 ? 20 1 1 D DC 12 1_555 G DG 7 1_555 0.166 -0.176 0.542 1.090 0.760 1.863 53 B_DC113:DG107_M B 113 ? M 107 ? 19 1 1 D DG 13 1_555 G DC 6 1_555 -0.141 -0.227 0.842 -0.454 -4.539 -1.726 54 B_DG114:DC106_M B 114 ? M 106 ? 19 1 1 D DG 14 1_555 G DC 5 1_555 -0.221 -0.214 -0.817 -10.565 -7.002 1.421 55 B_DG115:DC105_M B 115 ? M 105 ? 19 1 1 D DA 15 1_555 E DT 7 1_555 0.055 -0.138 -0.256 -6.801 -13.111 0.196 56 B_DA116:DT108_F B 116 ? F 108 ? 20 1 1 D DC 16 1_555 E DG 6 1_555 0.167 -0.114 0.053 -4.546 -7.280 -0.242 57 B_DC117:DG107_F B 117 ? F 107 ? 19 1 1 D DA 17 1_555 E DT 5 1_555 0.091 -0.124 0.028 -5.928 -7.741 -0.633 58 B_DA118:DT106_F B 118 ? F 106 ? 20 1 1 D DT 18 1_555 E DA 4 1_555 -0.201 -0.010 0.333 -5.488 -9.632 -5.382 59 B_DT119:DA105_F B 119 ? F 105 ? 20 1 1 D DA 19 1_555 E DT 3 1_555 -0.001 -0.211 -0.031 -8.091 -8.543 6.240 60 B_DA120:DT104_F B 120 ? F 104 ? 20 1 1 D DG 20 1_555 E DC 2 1_555 -0.198 -0.290 -1.013 -8.986 -6.249 0.366 61 B_DG121:DC103_F B 121 ? F 103 ? 19 1 1 D DA 21 1_555 E DT 1 1_555 0.244 -0.310 -1.382 -7.624 -2.844 -5.066 62 B_DA122:DT102_F B 122 ? F 102 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B DG 14 1_555 A DC 2 1_555 B DG 13 1_555 -0.051 -0.964 3.186 1.683 1.240 41.010 -1.505 0.251 3.152 1.768 -2.400 41.061 1 AA_DC102DC103:DG114DG115_EE A 102 ? E 115 ? A 103 ? E 114 ? 1 A DC 2 1_555 B DG 13 1_555 A DT 3 1_555 B DA 12 1_555 -0.173 1.386 3.611 -2.307 1.418 28.021 2.478 -0.246 3.677 2.920 4.749 28.149 2 AA_DC103DT104:DA113DG114_EE A 103 ? E 114 ? A 104 ? E 113 ? 1 A DT 3 1_555 B DA 12 1_555 A DG 4 1_555 B DC 11 1_555 0.280 -0.102 3.253 0.235 11.018 40.678 -1.273 -0.366 3.125 15.508 -0.330 42.084 3 AA_DT104DG105:DC112DA113_EE A 104 ? E 113 ? A 105 ? E 112 ? 1 A DG 4 1_555 B DC 11 1_555 A DA 5 1_555 B DT 10 1_555 -0.430 0.467 3.390 -3.734 5.502 33.131 -0.137 0.101 3.447 9.529 6.467 33.773 4 AA_DG105DA106:DT111DC112_EE A 105 ? E 112 ? A 106 ? E 111 ? 1 A DA 5 1_555 B DT 10 1_555 A DC 6 1_555 B DG 9 1_555 0.845 -1.211 3.173 -3.478 2.342 33.251 -2.465 -2.006 2.982 4.072 6.049 33.507 5 AA_DA106DC107:DG110DT111_EE A 106 ? E 111 ? A 107 ? E 110 ? 1 A DC 6 1_555 B DG 9 1_555 A DC 7 1_555 B DG 8 1_555 0.728 -0.481 3.174 -2.447 9.356 42.522 -1.505 -1.205 2.965 12.705 3.323 43.559 6 AA_DC107DC108:DG109DG110_EE A 107 ? E 110 ? A 108 ? E 109 ? 1 A DC 7 1_555 B DG 8 1_555 A DT 8 1_555 G DA 18 1_555 -2.735 -0.650 3.399 0.343 4.569 10.867 -9.233 13.768 2.803 22.841 -1.717 11.791 7 AA_DC108DT109:DA118DG109_ME A 108 ? E 109 ? A 109 ? M 118 ? 1 A DT 8 1_555 G DA 18 1_555 A DG 9 1_555 G DC 17 1_555 0.359 -0.439 2.880 -0.638 4.409 38.630 -1.127 -0.608 2.809 6.638 0.960 38.876 8 AA_DT109DG110:DC117DA118_MM A 109 ? M 118 ? A 110 ? M 117 ? 1 A DG 9 1_555 G DC 17 1_555 A DG 10 1_555 G DC 16 1_555 0.987 0.264 3.147 0.519 1.606 31.271 0.197 -1.733 3.171 2.976 -0.962 31.316 9 AA_DG110DG111:DC116DC117_MM A 110 ? M 117 ? A 111 ? M 116 ? 1 A DG 10 1_555 G DC 16 1_555 A DC 11 1_555 G DG 15 1_555 -0.440 -0.624 3.248 1.110 -0.831 43.599 -0.760 0.698 3.247 -1.118 -1.493 43.620 10 AA_DG111DC112:DG115DC116_MM A 111 ? M 116 ? A 112 ? M 115 ? 1 A DC 11 1_555 G DG 15 1_555 A DA 12 1_555 G DT 14 1_555 -0.604 2.823 3.968 3.633 0.025 39.059 4.202 1.422 3.901 0.037 -5.419 39.221 11 AA_DC112DA113:DT114DG115_MM A 112 ? M 115 ? A 113 ? M 114 ? 1 A DA 12 1_555 G DT 14 1_555 A DG 13 1_555 G DC 13 1_555 -1.006 -0.243 3.495 -4.265 -0.884 34.336 -0.261 0.976 3.595 -1.491 7.189 34.603 12 AA_DA113DG114:DC113DT114_MM A 113 ? M 114 ? A 114 ? M 113 ? 1 A DG 13 1_555 G DC 13 1_555 A DG 14 1_555 G DC 12 1_555 -0.575 0.407 3.748 -5.003 -0.200 39.259 0.629 0.171 3.788 -0.297 7.409 39.565 13 AA_DG114DG115:DC112DC113_MM A 114 ? M 113 ? A 115 ? M 112 ? 1 A DG 14 1_555 G DC 12 1_555 A DA 15 1_555 C DT 7 1_555 0.191 -0.779 2.961 -15.331 3.524 27.564 -2.002 -2.845 2.410 6.745 29.344 31.661 14 AA_DG115DA116:DT108DC112_DM A 115 ? M 112 ? A 116 ? D 108 ? 1 A DA 15 1_555 C DT 7 1_555 A DC 16 1_555 C DG 6 1_555 -1.626 -0.421 3.376 -2.004 1.232 26.956 -1.227 2.944 3.463 2.637 4.289 27.057 15 AA_DA116DC117:DG107DT108_DD A 116 ? D 108 ? A 117 ? D 107 ? 1 A DC 16 1_555 C DG 6 1_555 A DG 17 1_555 C DC 5 1_555 0.337 0.734 3.152 -0.701 2.998 31.214 0.808 -0.752 3.199 5.554 1.299 31.362 16 AA_DC117DG118:DC106DG107_DD A 117 ? D 107 ? A 118 ? D 106 ? 1 A DG 17 1_555 C DC 5 1_555 A DT 18 1_555 C DA 4 1_555 0.590 -0.533 3.431 2.784 -0.178 35.183 -0.851 -0.538 3.468 -0.294 -4.597 35.290 17 AA_DG118DT119:DA105DC106_DD A 118 ? D 106 ? A 119 ? D 105 ? 1 A DT 18 1_555 C DA 4 1_555 A DA 19 1_555 C DT 3 1_555 -0.555 1.965 3.649 -0.096 -0.530 37.608 3.125 0.848 3.623 -0.822 0.150 37.612 18 AA_DT119DA120:DT104DA105_DD A 119 ? D 105 ? A 120 ? D 104 ? 1 A DA 19 1_555 C DT 3 1_555 A DC 20 1_555 C DG 2 1_555 -0.051 -0.969 3.410 -0.518 2.360 32.841 -2.124 -0.001 3.335 4.167 0.914 32.927 19 AA_DA120DC121:DG103DT104_DD A 120 ? D 104 ? A 121 ? D 103 ? 1 A DC 20 1_555 C DG 2 1_555 A DT 21 1_555 C DA 1 1_555 0.612 0.486 4.094 -2.149 1.079 34.752 0.607 -1.430 4.063 1.804 3.592 34.833 20 AA_DC121DT122:DA102DG103_DD A 121 ? D 103 ? A 122 ? D 102 ? 1 B DT 2 1_555 F DA 21 1_555 B DG 3 1_555 F DC 20 1_555 -0.140 -0.884 3.052 -1.812 3.588 33.223 -2.080 -0.032 2.946 6.246 3.154 33.458 21 EE_DT103DG104:DC120DA121_CC E 103 ? C 121 ? E 104 ? C 120 ? 1 B DG 3 1_555 F DC 20 1_555 B DA 4 1_555 F DT 19 1_555 -0.380 -1.566 3.377 0.870 -1.813 30.257 -2.612 0.909 3.450 -3.468 -1.664 30.322 22 EE_DG104DA105:DT119DC120_CC E 104 ? C 120 ? E 105 ? C 119 ? 1 B DA 4 1_555 F DT 19 1_555 B DT 5 1_555 F DA 18 1_555 -0.189 -0.912 3.321 0.724 1.943 29.622 -2.191 0.523 3.251 3.795 -1.414 29.693 23 EE_DA105DT106:DA118DT119_CC E 105 ? C 119 ? E 106 ? C 118 ? 1 B DT 5 1_555 F DA 18 1_555 B DG 6 1_555 F DC 17 1_555 0.255 1.590 3.433 -1.187 0.121 38.443 2.398 -0.542 3.428 0.184 1.802 38.461 24 EE_DT106DG107:DC117DA118_CC E 106 ? C 118 ? E 107 ? C 117 ? 1 B DG 6 1_555 F DC 17 1_555 B DT 7 1_555 F DA 16 1_555 0.701 0.212 3.390 -1.981 1.654 26.806 0.018 -2.028 3.337 3.558 4.261 26.928 25 EE_DG107DT108:DA116DC117_CC E 107 ? C 117 ? E 108 ? C 116 ? 1 B DT 7 1_555 F DA 16 1_555 G DC 19 1_555 F DG 15 1_555 0.670 -0.620 3.180 2.566 -2.744 29.501 -0.639 -0.773 3.268 -5.362 -5.014 29.734 26 EM_DT108DC119:DG115DA116_CC E 108 ? C 116 ? M 119 ? C 115 ? 1 G DC 19 1_555 F DG 15 1_555 G DC 20 1_555 F DG 14 1_555 0.420 1.927 4.669 -3.692 6.555 46.339 1.628 -0.975 4.838 8.266 4.656 46.913 27 MM_DC119DC120:DG114DG115_CC M 119 ? C 115 ? M 120 ? C 114 ? 1 G DC 20 1_555 F DG 14 1_555 G DG 21 1_555 F DC 13 1_555 0.847 0.491 3.741 2.222 4.332 37.323 0.108 -0.978 3.815 6.734 -3.454 37.628 28 MM_DC120DG121:DC113DG114_CC M 120 ? C 114 ? M 121 ? C 113 ? 1 G DG 21 1_555 F DC 13 1_555 G DT 1 1_555 F DA 12 1_555 0.036 -0.046 4.279 -3.160 -11.613 37.476 1.747 -0.548 4.099 -17.530 4.771 39.295 29 MM_DG121DT101:DA112DC113_CC M 121 ? C 113 ? M 101 ? C 112 ? 1 G DT 1 1_555 F DA 12 1_555 G DA 2 1_555 F DT 11 1_555 -0.982 2.319 3.297 1.875 -4.040 44.876 3.376 1.444 3.047 -5.277 -2.448 45.085 30 MM_DT101DA102:DT111DA112_CC M 101 ? C 112 ? M 102 ? C 111 ? 1 G DA 2 1_555 F DT 11 1_555 G DC 3 1_555 F DG 10 1_555 -0.274 -0.367 3.183 -3.596 -0.065 35.181 -0.595 -0.067 3.195 -0.107 5.930 35.359 31 MM_DA102DC103:DG110DT111_CC M 102 ? C 111 ? M 103 ? C 110 ? 1 G DC 3 1_555 F DG 10 1_555 G DA 4 1_555 F DT 9 1_555 1.584 -0.160 2.901 -0.437 2.361 39.136 -0.488 -2.407 2.870 3.521 0.651 39.206 32 MM_DC103DA104:DT109DG110_CC M 103 ? C 110 ? M 104 ? C 109 ? 1 G DA 4 1_555 F DT 9 1_555 E DG 8 1_555 F DC 8 1_555 2.920 -1.863 3.582 11.097 20.540 8.291 -10.925 -3.257 0.972 62.214 -33.614 24.755 33 MF_DA104DG109:DC108DT109_CC M 104 ? C 109 ? F 109 ? C 108 ? 1 E DG 8 1_555 F DC 8 1_555 E DG 9 1_555 F DC 7 1_555 -0.584 -0.352 3.441 -3.175 0.153 35.700 -0.596 0.466 3.477 0.250 5.167 35.837 34 FF_DG109DG110:DC107DC108_CC F 109 ? C 108 ? F 110 ? C 107 ? 1 E DG 9 1_555 F DC 7 1_555 E DT 10 1_555 F DA 6 1_555 0.111 -0.583 3.189 0.460 0.118 26.502 -1.302 -0.123 3.188 0.257 -1.002 26.506 35 FF_DG110DT111:DA106DC107_CC F 110 ? C 107 ? F 111 ? C 106 ? 1 E DT 10 1_555 F DA 6 1_555 E DC 11 1_555 F DG 5 1_555 -0.776 0.184 3.392 -8.677 3.831 36.797 -0.240 0.009 3.481 5.948 13.472 37.958 36 FF_DT111DC112:DG105DA106_CC F 111 ? C 106 ? F 112 ? C 105 ? 1 E DC 11 1_555 F DG 5 1_555 E DG 12 1_555 F DC 4 1_555 0.868 -0.068 2.970 -2.316 10.741 37.884 -1.245 -1.535 2.794 16.134 3.479 39.390 37 FF_DC112DG113:DC104DG105_CC F 112 ? C 105 ? F 113 ? C 104 ? 1 E DG 12 1_555 F DC 4 1_555 E DC 13 1_555 F DG 3 1_555 -1.258 -0.541 3.055 -1.542 0.034 37.568 -0.843 1.764 3.102 0.053 2.394 37.598 38 FF_DG113DC114:DG103DC104_CC F 113 ? C 104 ? F 114 ? C 103 ? 1 E DC 13 1_555 F DG 3 1_555 E DT 14 1_555 F DA 2 1_555 0.173 -0.320 3.053 1.638 4.415 34.772 -1.146 -0.059 2.996 7.347 -2.725 35.079 39 FF_DC114DT115:DA102DG103_CC F 114 ? C 103 ? F 115 ? C 102 ? 1 D DC 1 1_555 C DG 14 1_555 D DG 2 1_555 C DC 13 1_555 -0.144 -0.943 3.190 -8.673 14.850 28.196 -3.989 -1.104 2.362 27.487 16.053 32.935 40 BB_DC102DG103:DC114DG115_DD B 102 ? D 115 ? B 103 ? D 114 ? 1 D DG 2 1_555 C DC 13 1_555 D DA 3 1_555 C DT 12 1_555 -0.669 -0.099 3.144 -0.625 2.805 38.605 -0.480 0.936 3.139 4.236 0.944 38.708 41 BB_DG103DA104:DT113DC114_DD B 103 ? D 114 ? B 104 ? D 113 ? 1 D DA 3 1_555 C DT 12 1_555 D DT 4 1_555 C DA 11 1_555 0.122 -0.978 3.245 -0.674 0.647 28.331 -2.145 -0.403 3.218 1.321 1.377 28.346 42 BB_DA104DT105:DA112DT113_DD B 104 ? D 113 ? B 105 ? D 112 ? 1 D DT 4 1_555 C DA 11 1_555 D DG 5 1_555 C DC 10 1_555 0.228 -0.615 3.282 4.991 7.633 35.687 -2.003 0.312 3.092 12.211 -7.984 36.797 43 BB_DT105DG106:DC111DA112_DD B 105 ? D 112 ? B 106 ? D 111 ? 1 D DG 5 1_555 C DC 10 1_555 D DC 6 1_555 C DG 9 1_555 -1.605 -0.169 3.196 -3.011 2.910 37.178 -0.644 2.109 3.290 4.547 4.705 37.405 44 BB_DG106DC107:DG110DC111_DD B 106 ? D 111 ? B 107 ? D 110 ? 1 D DC 6 1_555 C DG 9 1_555 D DC 7 1_555 C DG 8 1_555 0.835 -0.061 3.171 3.158 3.415 44.698 -0.382 -0.813 3.206 4.476 -4.139 44.927 45 BB_DC107DC108:DG109DG110_DD B 107 ? D 110 ? B 108 ? D 109 ? 1 D DC 7 1_555 C DG 8 1_555 D DT 8 1_555 G DA 11 1_555 -1.438 -1.115 3.355 1.109 15.415 -12.088 -5.806 -3.571 3.030 -52.057 3.744 -19.598 46 BB_DC108DT109:DA111DG109_MD B 108 ? D 109 ? B 109 ? M 111 ? 1 D DT 8 1_555 G DA 11 1_555 D DG 9 1_555 G DC 10 1_555 -0.844 -0.824 3.270 -5.983 3.719 41.325 -1.543 0.551 3.272 5.224 8.404 41.895 47 BB_DT109DG110:DC110DA111_MM B 109 ? M 111 ? B 110 ? M 110 ? 1 D DG 9 1_555 G DC 10 1_555 D DA 10 1_555 G DT 9 1_555 -0.906 0.922 3.431 -3.824 7.636 33.783 0.267 0.876 3.625 12.886 6.453 34.815 48 BB_DG110DA111:DT109DC110_MM B 110 ? M 110 ? B 111 ? M 109 ? 1 D DA 10 1_555 G DT 9 1_555 D DT 11 1_555 G DA 8 1_555 -0.039 -1.236 3.219 -0.152 1.882 32.089 -2.561 0.043 3.143 3.401 0.274 32.143 49 BB_DA111DT112:DA108DT109_MM B 111 ? M 109 ? B 112 ? M 108 ? 1 D DT 11 1_555 G DA 8 1_555 D DC 12 1_555 G DG 7 1_555 1.915 -0.249 3.445 -1.180 3.267 37.640 -0.823 -3.114 3.353 5.051 1.823 37.794 50 BB_DT112DC113:DG107DA108_MM B 112 ? M 108 ? B 113 ? M 107 ? 1 D DC 12 1_555 G DG 7 1_555 D DG 13 1_555 G DC 6 1_555 -0.353 2.657 3.589 0.711 -2.592 35.518 4.746 0.688 3.386 -4.241 -1.163 35.617 51 BB_DC113DG114:DC106DG107_MM B 113 ? M 107 ? B 114 ? M 106 ? 1 D DG 13 1_555 G DC 6 1_555 D DG 14 1_555 G DC 5 1_555 -0.036 1.882 4.331 1.585 3.293 47.619 1.972 0.214 4.441 4.072 -1.960 47.751 52 BB_DG114DG115:DC105DC106_MM B 114 ? M 106 ? B 115 ? M 105 ? 1 D DG 14 1_555 G DC 5 1_555 D DA 15 1_555 E DT 7 1_555 0.111 -0.015 3.093 -9.669 8.945 38.575 -0.958 -1.172 2.911 13.083 14.143 40.681 53 BB_DG115DA116:DT108DC105_FM B 115 ? M 105 ? B 116 ? F 108 ? 1 D DA 15 1_555 E DT 7 1_555 D DC 16 1_555 E DG 6 1_555 -0.555 0.960 3.254 -3.864 -3.266 30.512 2.428 0.300 3.181 -6.152 7.279 30.919 54 BB_DA116DC117:DG107DT108_FF B 116 ? F 108 ? B 117 ? F 107 ? 1 D DC 16 1_555 E DG 6 1_555 D DA 17 1_555 E DT 5 1_555 -0.394 -0.757 3.233 -2.558 1.934 32.342 -1.687 0.262 3.204 3.461 4.579 32.496 55 BB_DC117DA118:DT106DG107_FF B 117 ? F 107 ? B 118 ? F 106 ? 1 D DA 17 1_555 E DT 5 1_555 D DT 18 1_555 E DA 4 1_555 0.009 -0.771 3.180 -2.965 -1.794 29.593 -1.133 -0.623 3.204 -3.496 5.780 29.791 56 BB_DA118DT119:DA105DT106_FF B 118 ? F 106 ? B 119 ? F 105 ? 1 D DT 18 1_555 E DA 4 1_555 D DA 19 1_555 E DT 3 1_555 -0.257 -0.045 3.234 0.164 1.762 31.165 -0.415 0.508 3.225 3.276 -0.304 31.214 57 BB_DT119DA120:DT104DA105_FF B 119 ? F 105 ? B 120 ? F 104 ? 1 D DA 19 1_555 E DT 3 1_555 D DG 20 1_555 E DC 2 1_555 -0.873 2.266 3.528 -5.076 1.230 47.710 2.679 0.632 3.651 1.516 6.253 47.979 58 BB_DA120DG121:DC103DT104_FF B 120 ? F 104 ? B 121 ? F 103 ? 1 D DG 20 1_555 E DC 2 1_555 D DA 21 1_555 E DT 1 1_555 -0.383 -0.213 3.430 -3.441 2.860 36.182 -0.757 0.111 3.424 4.584 5.515 36.448 59 BB_DG121DA122:DT102DC103_FF B 121 ? F 103 ? B 122 ? F 102 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Office of Naval Research (ONR)' 'United States' N000141912596 1 'Department of Energy (DOE, United States)' 'United States' DE-SC0007991 2 'National Science Foundation (NSF, United States)' 'United States' CCF-2106790 3 'National Science Foundation (NSF, United States)' 'United States' GCR-2317843 4 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 8d93 _pdbx_initial_refinement_model.details ? # _space_group.name_H-M_alt 'C 2 2 21' _space_group.name_Hall 'C 2c 2' _space_group.IT_number 20 _space_group.crystal_system orthorhombic _space_group.id 1 # _atom_sites.entry_id 9Y3B _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.011268 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009542 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.003785 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 5.96793 ? ? ? 14.89577 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 6.96715 ? ? ? 11.43723 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 7.96527 ? ? ? 9.05267 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? P ? ? 14.90797 ? ? ? 11.91318 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ # loop_ #