data_9Y4J # _entry.id 9Y4J # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.416 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9Y4J pdb_00009y4j 10.2210/pdb9y4j/pdb WWPDB D_1000299075 ? ? EMDB EMD-72484 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2026-09-09 ? 2 'EM metadata' 1 0 2026-09-09 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9Y4J _pdbx_database_status.recvd_initial_deposition_date 2025-09-03 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'CryoEM Structure of human MDA5 with dsRNA (one protein subunit on dsRNA)' _pdbx_database_related.db_id EMD-72484 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 3 _pdbx_contact_author.email anna.pyle@yale.edu _pdbx_contact_author.name_first Anna _pdbx_contact_author.name_last Pyle _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-9045-8872 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Xu, L.' 1 0000-0002-9057-0829 'Chung, K.' 2 0000-0003-0402-6833 'Pyle, A.' 3 0000-0001-9045-8872 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Unraveling the molecular basis for MDA5 T331I disease-linked mutation' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Xu, L.' 1 0000-0002-9057-0829 primary 'Chung, K.' 2 0000-0003-0402-6833 primary 'Guo, R.' 3 ? primary 'Pan, A.' 4 ? primary 'Pyle, A.M.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Interferon-induced helicase C domain-containing protein 1' 83702.422 1 3.6.4.13 ? ? ? 2 polymer syn 'RNA 13mer' 4213.550 1 ? ? ? ? 3 polymer syn 'RNA 13mer' 4076.494 1 ? ? ? ? 4 non-polymer syn 'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' 506.196 1 ? ? ? ? 5 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 6 water nat water 18.015 2 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Clinically amyopathic dermatomyositis autoantigen 140 kDa,CADM-140 autoantigen,Helicase with 2 CARD domains,Helicard,Interferon-induced with helicase C domain protein 1,Melanoma differentiation-associated protein 5,MDA-5,Murabutide down-regulated protein,RIG-I-like receptor 2,RLR-2,RNA helicase-DEAD box protein 116 ; # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;ARASPEPELQLRPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVIVLVNKVLLVEQLFRKEF QPFLKKWYRVIGLSGDTQLKISFPEVVKSCDIIISTAQILENSLLNLENGEDAGVQLSDFSLIIIDECHHTNKEAVYNNI MRHYLMQKLKNNRLKKENKPVIPLPQILGLTASPGVGGATKQAKAEEHILKLCANLDAFTIKTVKENLDQLKNQIQEPCK KFAIADATREDPFKEKLLEIMTRIQTYCQMSPMSDFGTQPYEQWAIQMEKKAAKEGNRKERVCAEHLRKYNEALQINDTI RMIDAYTHLETFYNEEKDKKFAVIEDDSDEGGDDEYCDGDEDEDDLKKPLKLDETDRFLMTLFFENNKMLKRLAENPEYE NEKLTKLRNTIMEQYTRTEESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLIGAGHSSEFKPMTQNEQKEVISK FRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVAHSGSGVIEHETVNDFREKMMYKA IHCVQNMKPEEYAHKILELQMQSIMEKKMKTKRNIAKHYKNNPSLITFLCKNCSVLACSGEDIHVIEKMHHVNMTPEFKE LYIVRENKALQKKCADYQINGEIICKCGQAWGTMMVHKGLDLPCLKIRNFVVVFKNNSTKKQYKKWVELPITFPNLDYSE CCLFSDED ; ;ARASPEPELQLRPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVIVLVNKVLLVEQLFRKEF QPFLKKWYRVIGLSGDTQLKISFPEVVKSCDIIISTAQILENSLLNLENGEDAGVQLSDFSLIIIDECHHTNKEAVYNNI MRHYLMQKLKNNRLKKENKPVIPLPQILGLTASPGVGGATKQAKAEEHILKLCANLDAFTIKTVKENLDQLKNQIQEPCK KFAIADATREDPFKEKLLEIMTRIQTYCQMSPMSDFGTQPYEQWAIQMEKKAAKEGNRKERVCAEHLRKYNEALQINDTI RMIDAYTHLETFYNEEKDKKFAVIEDDSDEGGDDEYCDGDEDEDDLKKPLKLDETDRFLMTLFFENNKMLKRLAENPEYE NEKLTKLRNTIMEQYTRTEESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLIGAGHSSEFKPMTQNEQKEVISK FRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVAHSGSGVIEHETVNDFREKMMYKA IHCVQNMKPEEYAHKILELQMQSIMEKKMKTKRNIAKHYKNNPSLITFLCKNCSVLACSGEDIHVIEKMHHVNMTPEFKE LYIVRENKALQKKCADYQINGEIICKCGQAWGTMMVHKGLDLPCLKIRNFVVVFKNNSTKKQYKKWVELPITFPNLDYSE CCLFSDED ; A ? 2 polyribonucleotide no no CGGUUAGGGGCUA CGGUUAGGGGCUA B ? 3 polyribonucleotide no no UAGCCCCUAACCG UAGCCCCUAACCG C ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' ANP 5 'MAGNESIUM ION' MG 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 ARG n 1 3 ALA n 1 4 SER n 1 5 PRO n 1 6 GLU n 1 7 PRO n 1 8 GLU n 1 9 LEU n 1 10 GLN n 1 11 LEU n 1 12 ARG n 1 13 PRO n 1 14 TYR n 1 15 GLN n 1 16 MET n 1 17 GLU n 1 18 VAL n 1 19 ALA n 1 20 GLN n 1 21 PRO n 1 22 ALA n 1 23 LEU n 1 24 GLU n 1 25 GLY n 1 26 LYS n 1 27 ASN n 1 28 ILE n 1 29 ILE n 1 30 ILE n 1 31 CYS n 1 32 LEU n 1 33 PRO n 1 34 THR n 1 35 GLY n 1 36 SER n 1 37 GLY n 1 38 LYS n 1 39 THR n 1 40 ARG n 1 41 VAL n 1 42 ALA n 1 43 VAL n 1 44 TYR n 1 45 ILE n 1 46 ALA n 1 47 LYS n 1 48 ASP n 1 49 HIS n 1 50 LEU n 1 51 ASP n 1 52 LYS n 1 53 LYS n 1 54 LYS n 1 55 LYS n 1 56 ALA n 1 57 SER n 1 58 GLU n 1 59 PRO n 1 60 GLY n 1 61 LYS n 1 62 VAL n 1 63 ILE n 1 64 VAL n 1 65 LEU n 1 66 VAL n 1 67 ASN n 1 68 LYS n 1 69 VAL n 1 70 LEU n 1 71 LEU n 1 72 VAL n 1 73 GLU n 1 74 GLN n 1 75 LEU n 1 76 PHE n 1 77 ARG n 1 78 LYS n 1 79 GLU n 1 80 PHE n 1 81 GLN n 1 82 PRO n 1 83 PHE n 1 84 LEU n 1 85 LYS n 1 86 LYS n 1 87 TRP n 1 88 TYR n 1 89 ARG n 1 90 VAL n 1 91 ILE n 1 92 GLY n 1 93 LEU n 1 94 SER n 1 95 GLY n 1 96 ASP n 1 97 THR n 1 98 GLN n 1 99 LEU n 1 100 LYS n 1 101 ILE n 1 102 SER n 1 103 PHE n 1 104 PRO n 1 105 GLU n 1 106 VAL n 1 107 VAL n 1 108 LYS n 1 109 SER n 1 110 CYS n 1 111 ASP n 1 112 ILE n 1 113 ILE n 1 114 ILE n 1 115 SER n 1 116 THR n 1 117 ALA n 1 118 GLN n 1 119 ILE n 1 120 LEU n 1 121 GLU n 1 122 ASN n 1 123 SER n 1 124 LEU n 1 125 LEU n 1 126 ASN n 1 127 LEU n 1 128 GLU n 1 129 ASN n 1 130 GLY n 1 131 GLU n 1 132 ASP n 1 133 ALA n 1 134 GLY n 1 135 VAL n 1 136 GLN n 1 137 LEU n 1 138 SER n 1 139 ASP n 1 140 PHE n 1 141 SER n 1 142 LEU n 1 143 ILE n 1 144 ILE n 1 145 ILE n 1 146 ASP n 1 147 GLU n 1 148 CYS n 1 149 HIS n 1 150 HIS n 1 151 THR n 1 152 ASN n 1 153 LYS n 1 154 GLU n 1 155 ALA n 1 156 VAL n 1 157 TYR n 1 158 ASN n 1 159 ASN n 1 160 ILE n 1 161 MET n 1 162 ARG n 1 163 HIS n 1 164 TYR n 1 165 LEU n 1 166 MET n 1 167 GLN n 1 168 LYS n 1 169 LEU n 1 170 LYS n 1 171 ASN n 1 172 ASN n 1 173 ARG n 1 174 LEU n 1 175 LYS n 1 176 LYS n 1 177 GLU n 1 178 ASN n 1 179 LYS n 1 180 PRO n 1 181 VAL n 1 182 ILE n 1 183 PRO n 1 184 LEU n 1 185 PRO n 1 186 GLN n 1 187 ILE n 1 188 LEU n 1 189 GLY n 1 190 LEU n 1 191 THR n 1 192 ALA n 1 193 SER n 1 194 PRO n 1 195 GLY n 1 196 VAL n 1 197 GLY n 1 198 GLY n 1 199 ALA n 1 200 THR n 1 201 LYS n 1 202 GLN n 1 203 ALA n 1 204 LYS n 1 205 ALA n 1 206 GLU n 1 207 GLU n 1 208 HIS n 1 209 ILE n 1 210 LEU n 1 211 LYS n 1 212 LEU n 1 213 CYS n 1 214 ALA n 1 215 ASN n 1 216 LEU n 1 217 ASP n 1 218 ALA n 1 219 PHE n 1 220 THR n 1 221 ILE n 1 222 LYS n 1 223 THR n 1 224 VAL n 1 225 LYS n 1 226 GLU n 1 227 ASN n 1 228 LEU n 1 229 ASP n 1 230 GLN n 1 231 LEU n 1 232 LYS n 1 233 ASN n 1 234 GLN n 1 235 ILE n 1 236 GLN n 1 237 GLU n 1 238 PRO n 1 239 CYS n 1 240 LYS n 1 241 LYS n 1 242 PHE n 1 243 ALA n 1 244 ILE n 1 245 ALA n 1 246 ASP n 1 247 ALA n 1 248 THR n 1 249 ARG n 1 250 GLU n 1 251 ASP n 1 252 PRO n 1 253 PHE n 1 254 LYS n 1 255 GLU n 1 256 LYS n 1 257 LEU n 1 258 LEU n 1 259 GLU n 1 260 ILE n 1 261 MET n 1 262 THR n 1 263 ARG n 1 264 ILE n 1 265 GLN n 1 266 THR n 1 267 TYR n 1 268 CYS n 1 269 GLN n 1 270 MET n 1 271 SER n 1 272 PRO n 1 273 MET n 1 274 SER n 1 275 ASP n 1 276 PHE n 1 277 GLY n 1 278 THR n 1 279 GLN n 1 280 PRO n 1 281 TYR n 1 282 GLU n 1 283 GLN n 1 284 TRP n 1 285 ALA n 1 286 ILE n 1 287 GLN n 1 288 MET n 1 289 GLU n 1 290 LYS n 1 291 LYS n 1 292 ALA n 1 293 ALA n 1 294 LYS n 1 295 GLU n 1 296 GLY n 1 297 ASN n 1 298 ARG n 1 299 LYS n 1 300 GLU n 1 301 ARG n 1 302 VAL n 1 303 CYS n 1 304 ALA n 1 305 GLU n 1 306 HIS n 1 307 LEU n 1 308 ARG n 1 309 LYS n 1 310 TYR n 1 311 ASN n 1 312 GLU n 1 313 ALA n 1 314 LEU n 1 315 GLN n 1 316 ILE n 1 317 ASN n 1 318 ASP n 1 319 THR n 1 320 ILE n 1 321 ARG n 1 322 MET n 1 323 ILE n 1 324 ASP n 1 325 ALA n 1 326 TYR n 1 327 THR n 1 328 HIS n 1 329 LEU n 1 330 GLU n 1 331 THR n 1 332 PHE n 1 333 TYR n 1 334 ASN n 1 335 GLU n 1 336 GLU n 1 337 LYS n 1 338 ASP n 1 339 LYS n 1 340 LYS n 1 341 PHE n 1 342 ALA n 1 343 VAL n 1 344 ILE n 1 345 GLU n 1 346 ASP n 1 347 ASP n 1 348 SER n 1 349 ASP n 1 350 GLU n 1 351 GLY n 1 352 GLY n 1 353 ASP n 1 354 ASP n 1 355 GLU n 1 356 TYR n 1 357 CYS n 1 358 ASP n 1 359 GLY n 1 360 ASP n 1 361 GLU n 1 362 ASP n 1 363 GLU n 1 364 ASP n 1 365 ASP n 1 366 LEU n 1 367 LYS n 1 368 LYS n 1 369 PRO n 1 370 LEU n 1 371 LYS n 1 372 LEU n 1 373 ASP n 1 374 GLU n 1 375 THR n 1 376 ASP n 1 377 ARG n 1 378 PHE n 1 379 LEU n 1 380 MET n 1 381 THR n 1 382 LEU n 1 383 PHE n 1 384 PHE n 1 385 GLU n 1 386 ASN n 1 387 ASN n 1 388 LYS n 1 389 MET n 1 390 LEU n 1 391 LYS n 1 392 ARG n 1 393 LEU n 1 394 ALA n 1 395 GLU n 1 396 ASN n 1 397 PRO n 1 398 GLU n 1 399 TYR n 1 400 GLU n 1 401 ASN n 1 402 GLU n 1 403 LYS n 1 404 LEU n 1 405 THR n 1 406 LYS n 1 407 LEU n 1 408 ARG n 1 409 ASN n 1 410 THR n 1 411 ILE n 1 412 MET n 1 413 GLU n 1 414 GLN n 1 415 TYR n 1 416 THR n 1 417 ARG n 1 418 THR n 1 419 GLU n 1 420 GLU n 1 421 SER n 1 422 ALA n 1 423 ARG n 1 424 GLY n 1 425 ILE n 1 426 ILE n 1 427 PHE n 1 428 THR n 1 429 LYS n 1 430 THR n 1 431 ARG n 1 432 GLN n 1 433 SER n 1 434 ALA n 1 435 TYR n 1 436 ALA n 1 437 LEU n 1 438 SER n 1 439 GLN n 1 440 TRP n 1 441 ILE n 1 442 THR n 1 443 GLU n 1 444 ASN n 1 445 GLU n 1 446 LYS n 1 447 PHE n 1 448 ALA n 1 449 GLU n 1 450 VAL n 1 451 GLY n 1 452 VAL n 1 453 LYS n 1 454 ALA n 1 455 HIS n 1 456 HIS n 1 457 LEU n 1 458 ILE n 1 459 GLY n 1 460 ALA n 1 461 GLY n 1 462 HIS n 1 463 SER n 1 464 SER n 1 465 GLU n 1 466 PHE n 1 467 LYS n 1 468 PRO n 1 469 MET n 1 470 THR n 1 471 GLN n 1 472 ASN n 1 473 GLU n 1 474 GLN n 1 475 LYS n 1 476 GLU n 1 477 VAL n 1 478 ILE n 1 479 SER n 1 480 LYS n 1 481 PHE n 1 482 ARG n 1 483 THR n 1 484 GLY n 1 485 LYS n 1 486 ILE n 1 487 ASN n 1 488 LEU n 1 489 LEU n 1 490 ILE n 1 491 ALA n 1 492 THR n 1 493 THR n 1 494 VAL n 1 495 ALA n 1 496 GLU n 1 497 GLU n 1 498 GLY n 1 499 LEU n 1 500 ASP n 1 501 ILE n 1 502 LYS n 1 503 GLU n 1 504 CYS n 1 505 ASN n 1 506 ILE n 1 507 VAL n 1 508 ILE n 1 509 ARG n 1 510 TYR n 1 511 GLY n 1 512 LEU n 1 513 VAL n 1 514 THR n 1 515 ASN n 1 516 GLU n 1 517 ILE n 1 518 ALA n 1 519 MET n 1 520 VAL n 1 521 GLN n 1 522 ALA n 1 523 ARG n 1 524 GLY n 1 525 ARG n 1 526 ALA n 1 527 ARG n 1 528 ALA n 1 529 ASP n 1 530 GLU n 1 531 SER n 1 532 THR n 1 533 TYR n 1 534 VAL n 1 535 LEU n 1 536 VAL n 1 537 ALA n 1 538 HIS n 1 539 SER n 1 540 GLY n 1 541 SER n 1 542 GLY n 1 543 VAL n 1 544 ILE n 1 545 GLU n 1 546 HIS n 1 547 GLU n 1 548 THR n 1 549 VAL n 1 550 ASN n 1 551 ASP n 1 552 PHE n 1 553 ARG n 1 554 GLU n 1 555 LYS n 1 556 MET n 1 557 MET n 1 558 TYR n 1 559 LYS n 1 560 ALA n 1 561 ILE n 1 562 HIS n 1 563 CYS n 1 564 VAL n 1 565 GLN n 1 566 ASN n 1 567 MET n 1 568 LYS n 1 569 PRO n 1 570 GLU n 1 571 GLU n 1 572 TYR n 1 573 ALA n 1 574 HIS n 1 575 LYS n 1 576 ILE n 1 577 LEU n 1 578 GLU n 1 579 LEU n 1 580 GLN n 1 581 MET n 1 582 GLN n 1 583 SER n 1 584 ILE n 1 585 MET n 1 586 GLU n 1 587 LYS n 1 588 LYS n 1 589 MET n 1 590 LYS n 1 591 THR n 1 592 LYS n 1 593 ARG n 1 594 ASN n 1 595 ILE n 1 596 ALA n 1 597 LYS n 1 598 HIS n 1 599 TYR n 1 600 LYS n 1 601 ASN n 1 602 ASN n 1 603 PRO n 1 604 SER n 1 605 LEU n 1 606 ILE n 1 607 THR n 1 608 PHE n 1 609 LEU n 1 610 CYS n 1 611 LYS n 1 612 ASN n 1 613 CYS n 1 614 SER n 1 615 VAL n 1 616 LEU n 1 617 ALA n 1 618 CYS n 1 619 SER n 1 620 GLY n 1 621 GLU n 1 622 ASP n 1 623 ILE n 1 624 HIS n 1 625 VAL n 1 626 ILE n 1 627 GLU n 1 628 LYS n 1 629 MET n 1 630 HIS n 1 631 HIS n 1 632 VAL n 1 633 ASN n 1 634 MET n 1 635 THR n 1 636 PRO n 1 637 GLU n 1 638 PHE n 1 639 LYS n 1 640 GLU n 1 641 LEU n 1 642 TYR n 1 643 ILE n 1 644 VAL n 1 645 ARG n 1 646 GLU n 1 647 ASN n 1 648 LYS n 1 649 ALA n 1 650 LEU n 1 651 GLN n 1 652 LYS n 1 653 LYS n 1 654 CYS n 1 655 ALA n 1 656 ASP n 1 657 TYR n 1 658 GLN n 1 659 ILE n 1 660 ASN n 1 661 GLY n 1 662 GLU n 1 663 ILE n 1 664 ILE n 1 665 CYS n 1 666 LYS n 1 667 CYS n 1 668 GLY n 1 669 GLN n 1 670 ALA n 1 671 TRP n 1 672 GLY n 1 673 THR n 1 674 MET n 1 675 MET n 1 676 VAL n 1 677 HIS n 1 678 LYS n 1 679 GLY n 1 680 LEU n 1 681 ASP n 1 682 LEU n 1 683 PRO n 1 684 CYS n 1 685 LEU n 1 686 LYS n 1 687 ILE n 1 688 ARG n 1 689 ASN n 1 690 PHE n 1 691 VAL n 1 692 VAL n 1 693 VAL n 1 694 PHE n 1 695 LYS n 1 696 ASN n 1 697 ASN n 1 698 SER n 1 699 THR n 1 700 LYS n 1 701 LYS n 1 702 GLN n 1 703 TYR n 1 704 LYS n 1 705 LYS n 1 706 TRP n 1 707 VAL n 1 708 GLU n 1 709 LEU n 1 710 PRO n 1 711 ILE n 1 712 THR n 1 713 PHE n 1 714 PRO n 1 715 ASN n 1 716 LEU n 1 717 ASP n 1 718 TYR n 1 719 SER n 1 720 GLU n 1 721 CYS n 1 722 CYS n 1 723 LEU n 1 724 PHE n 1 725 SER n 1 726 ASP n 1 727 GLU n 1 728 ASP n 2 1 C n 2 2 G n 2 3 G n 2 4 U n 2 5 U n 2 6 A n 2 7 G n 2 8 G n 2 9 G n 2 10 G n 2 11 C n 2 12 U n 2 13 A n 3 1 U n 3 2 A n 3 3 G n 3 4 C n 3 5 C n 3 6 C n 3 7 C n 3 8 U n 3 9 A n 3 10 A n 3 11 C n 3 12 C n 3 13 G n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 728 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'IFIH1, MDA5, RH116' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ;Escherichia coli 'BL21-Gold(DE3)pLysS AG' ; _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 866768 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 13 'in vitro transcription vector pT7-Fluc(deltai)' ? 905932 ? 3 1 sample 1 13 'in vitro transcription vector pT7-Fluc(deltai)' ? 905932 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ANP non-polymer . 'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' ? 'C10 H17 N6 O12 P3' 506.196 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 298 ? ? ? A . n A 1 2 ARG 2 299 ? ? ? A . n A 1 3 ALA 3 300 ? ? ? A . n A 1 4 SER 4 301 ? ? ? A . n A 1 5 PRO 5 302 ? ? ? A . n A 1 6 GLU 6 303 ? ? ? A . n A 1 7 PRO 7 304 ? ? ? A . n A 1 8 GLU 8 305 ? ? ? A . n A 1 9 LEU 9 306 306 LEU LEU A . n A 1 10 GLN 10 307 307 GLN GLN A . n A 1 11 LEU 11 308 308 LEU LEU A . n A 1 12 ARG 12 309 309 ARG ARG A . n A 1 13 PRO 13 310 310 PRO PRO A . n A 1 14 TYR 14 311 311 TYR TYR A . n A 1 15 GLN 15 312 312 GLN GLN A . n A 1 16 MET 16 313 313 MET MET A . n A 1 17 GLU 17 314 314 GLU GLU A . n A 1 18 VAL 18 315 315 VAL VAL A . n A 1 19 ALA 19 316 316 ALA ALA A . n A 1 20 GLN 20 317 317 GLN GLN A . n A 1 21 PRO 21 318 318 PRO PRO A . n A 1 22 ALA 22 319 319 ALA ALA A . n A 1 23 LEU 23 320 320 LEU LEU A . n A 1 24 GLU 24 321 321 GLU GLU A . n A 1 25 GLY 25 322 322 GLY GLY A . n A 1 26 LYS 26 323 323 LYS LYS A . n A 1 27 ASN 27 324 324 ASN ASN A . n A 1 28 ILE 28 325 325 ILE ILE A . n A 1 29 ILE 29 326 326 ILE ILE A . n A 1 30 ILE 30 327 327 ILE ILE A . n A 1 31 CYS 31 328 328 CYS CYS A . n A 1 32 LEU 32 329 329 LEU LEU A . n A 1 33 PRO 33 330 330 PRO PRO A . n A 1 34 THR 34 331 331 THR THR A . n A 1 35 GLY 35 332 332 GLY GLY A . n A 1 36 SER 36 333 333 SER SER A . n A 1 37 GLY 37 334 334 GLY GLY A . n A 1 38 LYS 38 335 335 LYS LYS A . n A 1 39 THR 39 336 336 THR THR A . n A 1 40 ARG 40 337 337 ARG ARG A . n A 1 41 VAL 41 338 338 VAL VAL A . n A 1 42 ALA 42 339 339 ALA ALA A . n A 1 43 VAL 43 340 340 VAL VAL A . n A 1 44 TYR 44 341 341 TYR TYR A . n A 1 45 ILE 45 342 342 ILE ILE A . n A 1 46 ALA 46 343 343 ALA ALA A . n A 1 47 LYS 47 344 344 LYS LYS A . n A 1 48 ASP 48 345 345 ASP ASP A . n A 1 49 HIS 49 346 346 HIS HIS A . n A 1 50 LEU 50 347 347 LEU LEU A . n A 1 51 ASP 51 348 348 ASP ASP A . n A 1 52 LYS 52 349 349 LYS LYS A . n A 1 53 LYS 53 350 350 LYS LYS A . n A 1 54 LYS 54 351 351 LYS LYS A . n A 1 55 LYS 55 352 352 LYS LYS A . n A 1 56 ALA 56 353 353 ALA ALA A . n A 1 57 SER 57 354 354 SER SER A . n A 1 58 GLU 58 355 355 GLU GLU A . n A 1 59 PRO 59 356 356 PRO PRO A . n A 1 60 GLY 60 357 357 GLY GLY A . n A 1 61 LYS 61 358 358 LYS LYS A . n A 1 62 VAL 62 359 359 VAL VAL A . n A 1 63 ILE 63 360 360 ILE ILE A . n A 1 64 VAL 64 361 361 VAL VAL A . n A 1 65 LEU 65 362 362 LEU LEU A . n A 1 66 VAL 66 363 363 VAL VAL A . n A 1 67 ASN 67 364 364 ASN ASN A . n A 1 68 LYS 68 365 365 LYS LYS A . n A 1 69 VAL 69 366 366 VAL VAL A . n A 1 70 LEU 70 367 367 LEU LEU A . n A 1 71 LEU 71 368 368 LEU LEU A . n A 1 72 VAL 72 369 369 VAL VAL A . n A 1 73 GLU 73 370 370 GLU GLU A . n A 1 74 GLN 74 371 371 GLN GLN A . n A 1 75 LEU 75 372 372 LEU LEU A . n A 1 76 PHE 76 373 373 PHE PHE A . n A 1 77 ARG 77 374 374 ARG ARG A . n A 1 78 LYS 78 375 375 LYS LYS A . n A 1 79 GLU 79 376 376 GLU GLU A . n A 1 80 PHE 80 377 377 PHE PHE A . n A 1 81 GLN 81 378 378 GLN GLN A . n A 1 82 PRO 82 379 379 PRO PRO A . n A 1 83 PHE 83 380 380 PHE PHE A . n A 1 84 LEU 84 381 381 LEU LEU A . n A 1 85 LYS 85 382 382 LYS LYS A . n A 1 86 LYS 86 383 383 LYS LYS A . n A 1 87 TRP 87 384 384 TRP TRP A . n A 1 88 TYR 88 385 385 TYR TYR A . n A 1 89 ARG 89 386 386 ARG ARG A . n A 1 90 VAL 90 387 387 VAL VAL A . n A 1 91 ILE 91 388 388 ILE ILE A . n A 1 92 GLY 92 389 389 GLY GLY A . n A 1 93 LEU 93 390 390 LEU LEU A . n A 1 94 SER 94 391 391 SER SER A . n A 1 95 GLY 95 392 392 GLY GLY A . n A 1 96 ASP 96 393 393 ASP ASP A . n A 1 97 THR 97 394 394 THR THR A . n A 1 98 GLN 98 395 395 GLN GLN A . n A 1 99 LEU 99 396 396 LEU LEU A . n A 1 100 LYS 100 397 397 LYS LYS A . n A 1 101 ILE 101 398 398 ILE ILE A . n A 1 102 SER 102 399 399 SER SER A . n A 1 103 PHE 103 400 400 PHE PHE A . n A 1 104 PRO 104 401 401 PRO PRO A . n A 1 105 GLU 105 402 402 GLU GLU A . n A 1 106 VAL 106 403 403 VAL VAL A . n A 1 107 VAL 107 404 404 VAL VAL A . n A 1 108 LYS 108 405 405 LYS LYS A . n A 1 109 SER 109 406 406 SER SER A . n A 1 110 CYS 110 407 407 CYS CYS A . n A 1 111 ASP 111 408 408 ASP ASP A . n A 1 112 ILE 112 409 409 ILE ILE A . n A 1 113 ILE 113 410 410 ILE ILE A . n A 1 114 ILE 114 411 411 ILE ILE A . n A 1 115 SER 115 412 412 SER SER A . n A 1 116 THR 116 413 413 THR THR A . n A 1 117 ALA 117 414 414 ALA ALA A . n A 1 118 GLN 118 415 415 GLN GLN A . n A 1 119 ILE 119 416 416 ILE ILE A . n A 1 120 LEU 120 417 417 LEU LEU A . n A 1 121 GLU 121 418 418 GLU GLU A . n A 1 122 ASN 122 419 419 ASN ASN A . n A 1 123 SER 123 420 420 SER SER A . n A 1 124 LEU 124 421 421 LEU LEU A . n A 1 125 LEU 125 422 422 LEU LEU A . n A 1 126 ASN 126 423 423 ASN ASN A . n A 1 127 LEU 127 424 ? ? ? A . n A 1 128 GLU 128 425 ? ? ? A . n A 1 129 ASN 129 426 ? ? ? A . n A 1 130 GLY 130 427 ? ? ? A . n A 1 131 GLU 131 428 ? ? ? A . n A 1 132 ASP 132 429 ? ? ? A . n A 1 133 ALA 133 430 430 ALA ALA A . n A 1 134 GLY 134 431 431 GLY GLY A . n A 1 135 VAL 135 432 432 VAL VAL A . n A 1 136 GLN 136 433 433 GLN GLN A . n A 1 137 LEU 137 434 434 LEU LEU A . n A 1 138 SER 138 435 435 SER SER A . n A 1 139 ASP 139 436 436 ASP ASP A . n A 1 140 PHE 140 437 437 PHE PHE A . n A 1 141 SER 141 438 438 SER SER A . n A 1 142 LEU 142 439 439 LEU LEU A . n A 1 143 ILE 143 440 440 ILE ILE A . n A 1 144 ILE 144 441 441 ILE ILE A . n A 1 145 ILE 145 442 442 ILE ILE A . n A 1 146 ASP 146 443 443 ASP ASP A . n A 1 147 GLU 147 444 444 GLU GLU A . n A 1 148 CYS 148 445 445 CYS CYS A . n A 1 149 HIS 149 446 446 HIS HIS A . n A 1 150 HIS 150 447 447 HIS HIS A . n A 1 151 THR 151 448 448 THR THR A . n A 1 152 ASN 152 449 449 ASN ASN A . n A 1 153 LYS 153 450 450 LYS LYS A . n A 1 154 GLU 154 451 451 GLU GLU A . n A 1 155 ALA 155 452 452 ALA ALA A . n A 1 156 VAL 156 453 453 VAL VAL A . n A 1 157 TYR 157 454 454 TYR TYR A . n A 1 158 ASN 158 455 455 ASN ASN A . n A 1 159 ASN 159 456 456 ASN ASN A . n A 1 160 ILE 160 457 457 ILE ILE A . n A 1 161 MET 161 458 458 MET MET A . n A 1 162 ARG 162 459 459 ARG ARG A . n A 1 163 HIS 163 460 460 HIS HIS A . n A 1 164 TYR 164 461 461 TYR TYR A . n A 1 165 LEU 165 462 462 LEU LEU A . n A 1 166 MET 166 463 463 MET MET A . n A 1 167 GLN 167 464 464 GLN GLN A . n A 1 168 LYS 168 465 465 LYS LYS A . n A 1 169 LEU 169 466 466 LEU LEU A . n A 1 170 LYS 170 467 467 LYS LYS A . n A 1 171 ASN 171 468 468 ASN ASN A . n A 1 172 ASN 172 469 469 ASN ASN A . n A 1 173 ARG 173 470 470 ARG ARG A . n A 1 174 LEU 174 471 471 LEU LEU A . n A 1 175 LYS 175 472 472 LYS LYS A . n A 1 176 LYS 176 473 473 LYS LYS A . n A 1 177 GLU 177 474 474 GLU GLU A . n A 1 178 ASN 178 475 475 ASN ASN A . n A 1 179 LYS 179 476 476 LYS LYS A . n A 1 180 PRO 180 477 477 PRO PRO A . n A 1 181 VAL 181 478 478 VAL VAL A . n A 1 182 ILE 182 479 479 ILE ILE A . n A 1 183 PRO 183 480 480 PRO PRO A . n A 1 184 LEU 184 481 481 LEU LEU A . n A 1 185 PRO 185 482 482 PRO PRO A . n A 1 186 GLN 186 483 483 GLN GLN A . n A 1 187 ILE 187 484 484 ILE ILE A . n A 1 188 LEU 188 485 485 LEU LEU A . n A 1 189 GLY 189 486 486 GLY GLY A . n A 1 190 LEU 190 487 487 LEU LEU A . n A 1 191 THR 191 488 488 THR THR A . n A 1 192 ALA 192 489 489 ALA ALA A . n A 1 193 SER 193 490 490 SER SER A . n A 1 194 PRO 194 491 491 PRO PRO A . n A 1 195 GLY 195 492 492 GLY GLY A . n A 1 196 VAL 196 493 493 VAL VAL A . n A 1 197 GLY 197 494 494 GLY GLY A . n A 1 198 GLY 198 495 495 GLY GLY A . n A 1 199 ALA 199 496 496 ALA ALA A . n A 1 200 THR 200 497 497 THR THR A . n A 1 201 LYS 201 498 498 LYS LYS A . n A 1 202 GLN 202 499 499 GLN GLN A . n A 1 203 ALA 203 500 500 ALA ALA A . n A 1 204 LYS 204 501 501 LYS LYS A . n A 1 205 ALA 205 502 502 ALA ALA A . n A 1 206 GLU 206 503 503 GLU GLU A . n A 1 207 GLU 207 504 504 GLU GLU A . n A 1 208 HIS 208 505 505 HIS HIS A . n A 1 209 ILE 209 506 506 ILE ILE A . n A 1 210 LEU 210 507 507 LEU LEU A . n A 1 211 LYS 211 508 508 LYS LYS A . n A 1 212 LEU 212 509 509 LEU LEU A . n A 1 213 CYS 213 510 510 CYS CYS A . n A 1 214 ALA 214 511 511 ALA ALA A . n A 1 215 ASN 215 512 512 ASN ASN A . n A 1 216 LEU 216 513 513 LEU LEU A . n A 1 217 ASP 217 514 514 ASP ASP A . n A 1 218 ALA 218 515 515 ALA ALA A . n A 1 219 PHE 219 516 516 PHE PHE A . n A 1 220 THR 220 517 517 THR THR A . n A 1 221 ILE 221 518 518 ILE ILE A . n A 1 222 LYS 222 519 519 LYS LYS A . n A 1 223 THR 223 520 520 THR THR A . n A 1 224 VAL 224 521 521 VAL VAL A . n A 1 225 LYS 225 522 522 LYS LYS A . n A 1 226 GLU 226 523 523 GLU GLU A . n A 1 227 ASN 227 524 524 ASN ASN A . n A 1 228 LEU 228 525 525 LEU LEU A . n A 1 229 ASP 229 526 526 ASP ASP A . n A 1 230 GLN 230 527 527 GLN GLN A . n A 1 231 LEU 231 528 528 LEU LEU A . n A 1 232 LYS 232 529 529 LYS LYS A . n A 1 233 ASN 233 530 530 ASN ASN A . n A 1 234 GLN 234 531 531 GLN GLN A . n A 1 235 ILE 235 532 532 ILE ILE A . n A 1 236 GLN 236 533 533 GLN GLN A . n A 1 237 GLU 237 534 534 GLU GLU A . n A 1 238 PRO 238 535 535 PRO PRO A . n A 1 239 CYS 239 536 536 CYS CYS A . n A 1 240 LYS 240 537 537 LYS LYS A . n A 1 241 LYS 241 538 538 LYS LYS A . n A 1 242 PHE 242 539 539 PHE PHE A . n A 1 243 ALA 243 540 540 ALA ALA A . n A 1 244 ILE 244 541 541 ILE ILE A . n A 1 245 ALA 245 542 542 ALA ALA A . n A 1 246 ASP 246 543 543 ASP ASP A . n A 1 247 ALA 247 544 544 ALA ALA A . n A 1 248 THR 248 545 545 THR THR A . n A 1 249 ARG 249 546 546 ARG ARG A . n A 1 250 GLU 250 547 547 GLU GLU A . n A 1 251 ASP 251 548 548 ASP ASP A . n A 1 252 PRO 252 549 549 PRO PRO A . n A 1 253 PHE 253 550 550 PHE PHE A . n A 1 254 LYS 254 551 551 LYS LYS A . n A 1 255 GLU 255 552 552 GLU GLU A . n A 1 256 LYS 256 553 553 LYS LYS A . n A 1 257 LEU 257 554 554 LEU LEU A . n A 1 258 LEU 258 555 555 LEU LEU A . n A 1 259 GLU 259 556 556 GLU GLU A . n A 1 260 ILE 260 557 557 ILE ILE A . n A 1 261 MET 261 558 558 MET MET A . n A 1 262 THR 262 559 559 THR THR A . n A 1 263 ARG 263 560 560 ARG ARG A . n A 1 264 ILE 264 561 561 ILE ILE A . n A 1 265 GLN 265 562 562 GLN GLN A . n A 1 266 THR 266 563 563 THR THR A . n A 1 267 TYR 267 564 564 TYR TYR A . n A 1 268 CYS 268 565 565 CYS CYS A . n A 1 269 GLN 269 566 566 GLN GLN A . n A 1 270 MET 270 567 567 MET MET A . n A 1 271 SER 271 568 568 SER SER A . n A 1 272 PRO 272 569 569 PRO PRO A . n A 1 273 MET 273 570 570 MET MET A . n A 1 274 SER 274 571 571 SER SER A . n A 1 275 ASP 275 572 572 ASP ASP A . n A 1 276 PHE 276 573 573 PHE PHE A . n A 1 277 GLY 277 574 574 GLY GLY A . n A 1 278 THR 278 575 575 THR THR A . n A 1 279 GLN 279 576 576 GLN GLN A . n A 1 280 PRO 280 577 577 PRO PRO A . n A 1 281 TYR 281 578 578 TYR TYR A . n A 1 282 GLU 282 579 579 GLU GLU A . n A 1 283 GLN 283 580 580 GLN GLN A . n A 1 284 TRP 284 581 581 TRP TRP A . n A 1 285 ALA 285 582 582 ALA ALA A . n A 1 286 ILE 286 583 583 ILE ILE A . n A 1 287 GLN 287 584 584 GLN GLN A . n A 1 288 MET 288 585 585 MET MET A . n A 1 289 GLU 289 586 586 GLU GLU A . n A 1 290 LYS 290 587 587 LYS LYS A . n A 1 291 LYS 291 588 588 LYS LYS A . n A 1 292 ALA 292 589 589 ALA ALA A . n A 1 293 ALA 293 590 590 ALA ALA A . n A 1 294 LYS 294 591 591 LYS LYS A . n A 1 295 GLU 295 592 592 GLU GLU A . n A 1 296 GLY 296 593 593 GLY GLY A . n A 1 297 ASN 297 594 594 ASN ASN A . n A 1 298 ARG 298 595 595 ARG ARG A . n A 1 299 LYS 299 596 596 LYS LYS A . n A 1 300 GLU 300 597 597 GLU GLU A . n A 1 301 ARG 301 598 598 ARG ARG A . n A 1 302 VAL 302 599 599 VAL VAL A . n A 1 303 CYS 303 600 600 CYS CYS A . n A 1 304 ALA 304 601 601 ALA ALA A . n A 1 305 GLU 305 602 602 GLU GLU A . n A 1 306 HIS 306 603 603 HIS HIS A . n A 1 307 LEU 307 604 604 LEU LEU A . n A 1 308 ARG 308 605 605 ARG ARG A . n A 1 309 LYS 309 606 606 LYS LYS A . n A 1 310 TYR 310 607 607 TYR TYR A . n A 1 311 ASN 311 608 608 ASN ASN A . n A 1 312 GLU 312 609 609 GLU GLU A . n A 1 313 ALA 313 610 610 ALA ALA A . n A 1 314 LEU 314 611 611 LEU LEU A . n A 1 315 GLN 315 612 612 GLN GLN A . n A 1 316 ILE 316 613 613 ILE ILE A . n A 1 317 ASN 317 614 614 ASN ASN A . n A 1 318 ASP 318 615 615 ASP ASP A . n A 1 319 THR 319 616 616 THR THR A . n A 1 320 ILE 320 617 617 ILE ILE A . n A 1 321 ARG 321 618 618 ARG ARG A . n A 1 322 MET 322 619 619 MET MET A . n A 1 323 ILE 323 620 620 ILE ILE A . n A 1 324 ASP 324 621 621 ASP ASP A . n A 1 325 ALA 325 622 622 ALA ALA A . n A 1 326 TYR 326 623 623 TYR TYR A . n A 1 327 THR 327 624 624 THR THR A . n A 1 328 HIS 328 625 625 HIS HIS A . n A 1 329 LEU 329 626 626 LEU LEU A . n A 1 330 GLU 330 627 627 GLU GLU A . n A 1 331 THR 331 628 628 THR THR A . n A 1 332 PHE 332 629 629 PHE PHE A . n A 1 333 TYR 333 630 630 TYR TYR A . n A 1 334 ASN 334 631 631 ASN ASN A . n A 1 335 GLU 335 632 632 GLU GLU A . n A 1 336 GLU 336 633 633 GLU GLU A . n A 1 337 LYS 337 634 634 LYS LYS A . n A 1 338 ASP 338 635 635 ASP ASP A . n A 1 339 LYS 339 636 636 LYS LYS A . n A 1 340 LYS 340 637 637 LYS LYS A . n A 1 341 PHE 341 638 638 PHE PHE A . n A 1 342 ALA 342 639 639 ALA ALA A . n A 1 343 VAL 343 640 640 VAL VAL A . n A 1 344 ILE 344 641 ? ? ? A . n A 1 345 GLU 345 642 ? ? ? A . n A 1 346 ASP 346 643 ? ? ? A . n A 1 347 ASP 347 644 ? ? ? A . n A 1 348 SER 348 645 ? ? ? A . n A 1 349 ASP 349 646 ? ? ? A . n A 1 350 GLU 350 647 ? ? ? A . n A 1 351 GLY 351 648 ? ? ? A . n A 1 352 GLY 352 649 ? ? ? A . n A 1 353 ASP 353 650 ? ? ? A . n A 1 354 ASP 354 651 ? ? ? A . n A 1 355 GLU 355 652 ? ? ? A . n A 1 356 TYR 356 653 ? ? ? A . n A 1 357 CYS 357 654 ? ? ? A . n A 1 358 ASP 358 655 ? ? ? A . n A 1 359 GLY 359 656 ? ? ? A . n A 1 360 ASP 360 657 ? ? ? A . n A 1 361 GLU 361 658 ? ? ? A . n A 1 362 ASP 362 659 ? ? ? A . n A 1 363 GLU 363 660 ? ? ? A . n A 1 364 ASP 364 661 ? ? ? A . n A 1 365 ASP 365 662 ? ? ? A . n A 1 366 LEU 366 663 ? ? ? A . n A 1 367 LYS 367 664 ? ? ? A . n A 1 368 LYS 368 665 ? ? ? A . n A 1 369 PRO 369 666 ? ? ? A . n A 1 370 LEU 370 667 ? ? ? A . n A 1 371 LYS 371 668 ? ? ? A . n A 1 372 LEU 372 669 669 LEU LEU A . n A 1 373 ASP 373 670 670 ASP ASP A . n A 1 374 GLU 374 671 671 GLU GLU A . n A 1 375 THR 375 672 672 THR THR A . n A 1 376 ASP 376 673 673 ASP ASP A . n A 1 377 ARG 377 674 674 ARG ARG A . n A 1 378 PHE 378 675 675 PHE PHE A . n A 1 379 LEU 379 676 676 LEU LEU A . n A 1 380 MET 380 677 677 MET MET A . n A 1 381 THR 381 678 678 THR THR A . n A 1 382 LEU 382 679 679 LEU LEU A . n A 1 383 PHE 383 680 680 PHE PHE A . n A 1 384 PHE 384 681 681 PHE PHE A . n A 1 385 GLU 385 682 682 GLU GLU A . n A 1 386 ASN 386 683 683 ASN ASN A . n A 1 387 ASN 387 684 684 ASN ASN A . n A 1 388 LYS 388 685 685 LYS LYS A . n A 1 389 MET 389 686 686 MET MET A . n A 1 390 LEU 390 687 687 LEU LEU A . n A 1 391 LYS 391 688 688 LYS LYS A . n A 1 392 ARG 392 689 689 ARG ARG A . n A 1 393 LEU 393 690 690 LEU LEU A . n A 1 394 ALA 394 691 691 ALA ALA A . n A 1 395 GLU 395 692 692 GLU GLU A . n A 1 396 ASN 396 693 693 ASN ASN A . n A 1 397 PRO 397 694 694 PRO PRO A . n A 1 398 GLU 398 695 695 GLU GLU A . n A 1 399 TYR 399 696 696 TYR TYR A . n A 1 400 GLU 400 697 697 GLU GLU A . n A 1 401 ASN 401 698 698 ASN ASN A . n A 1 402 GLU 402 699 699 GLU GLU A . n A 1 403 LYS 403 700 700 LYS LYS A . n A 1 404 LEU 404 701 701 LEU LEU A . n A 1 405 THR 405 702 702 THR THR A . n A 1 406 LYS 406 703 703 LYS LYS A . n A 1 407 LEU 407 704 704 LEU LEU A . n A 1 408 ARG 408 705 705 ARG ARG A . n A 1 409 ASN 409 706 706 ASN ASN A . n A 1 410 THR 410 707 707 THR THR A . n A 1 411 ILE 411 708 708 ILE ILE A . n A 1 412 MET 412 709 709 MET MET A . n A 1 413 GLU 413 710 710 GLU GLU A . n A 1 414 GLN 414 711 711 GLN GLN A . n A 1 415 TYR 415 712 712 TYR TYR A . n A 1 416 THR 416 713 713 THR THR A . n A 1 417 ARG 417 714 714 ARG ARG A . n A 1 418 THR 418 715 715 THR THR A . n A 1 419 GLU 419 716 716 GLU GLU A . n A 1 420 GLU 420 717 717 GLU GLU A . n A 1 421 SER 421 718 718 SER SER A . n A 1 422 ALA 422 719 719 ALA ALA A . n A 1 423 ARG 423 720 720 ARG ARG A . n A 1 424 GLY 424 721 721 GLY GLY A . n A 1 425 ILE 425 722 722 ILE ILE A . n A 1 426 ILE 426 723 723 ILE ILE A . n A 1 427 PHE 427 724 724 PHE PHE A . n A 1 428 THR 428 725 725 THR THR A . n A 1 429 LYS 429 726 726 LYS LYS A . n A 1 430 THR 430 727 727 THR THR A . n A 1 431 ARG 431 728 728 ARG ARG A . n A 1 432 GLN 432 729 729 GLN GLN A . n A 1 433 SER 433 730 730 SER SER A . n A 1 434 ALA 434 731 731 ALA ALA A . n A 1 435 TYR 435 732 732 TYR TYR A . n A 1 436 ALA 436 733 733 ALA ALA A . n A 1 437 LEU 437 734 734 LEU LEU A . n A 1 438 SER 438 735 735 SER SER A . n A 1 439 GLN 439 736 736 GLN GLN A . n A 1 440 TRP 440 737 737 TRP TRP A . n A 1 441 ILE 441 738 738 ILE ILE A . n A 1 442 THR 442 739 739 THR THR A . n A 1 443 GLU 443 740 740 GLU GLU A . n A 1 444 ASN 444 741 741 ASN ASN A . n A 1 445 GLU 445 742 742 GLU GLU A . n A 1 446 LYS 446 743 743 LYS LYS A . n A 1 447 PHE 447 744 744 PHE PHE A . n A 1 448 ALA 448 745 745 ALA ALA A . n A 1 449 GLU 449 746 746 GLU GLU A . n A 1 450 VAL 450 747 747 VAL VAL A . n A 1 451 GLY 451 748 748 GLY GLY A . n A 1 452 VAL 452 749 749 VAL VAL A . n A 1 453 LYS 453 750 750 LYS LYS A . n A 1 454 ALA 454 751 751 ALA ALA A . n A 1 455 HIS 455 752 752 HIS HIS A . n A 1 456 HIS 456 753 753 HIS HIS A . n A 1 457 LEU 457 754 754 LEU LEU A . n A 1 458 ILE 458 755 755 ILE ILE A . n A 1 459 GLY 459 756 756 GLY GLY A . n A 1 460 ALA 460 757 757 ALA ALA A . n A 1 461 GLY 461 758 758 GLY GLY A . n A 1 462 HIS 462 759 759 HIS HIS A . n A 1 463 SER 463 760 760 SER SER A . n A 1 464 SER 464 761 761 SER SER A . n A 1 465 GLU 465 762 762 GLU GLU A . n A 1 466 PHE 466 763 763 PHE PHE A . n A 1 467 LYS 467 764 764 LYS LYS A . n A 1 468 PRO 468 765 765 PRO PRO A . n A 1 469 MET 469 766 766 MET MET A . n A 1 470 THR 470 767 767 THR THR A . n A 1 471 GLN 471 768 768 GLN GLN A . n A 1 472 ASN 472 769 769 ASN ASN A . n A 1 473 GLU 473 770 770 GLU GLU A . n A 1 474 GLN 474 771 771 GLN GLN A . n A 1 475 LYS 475 772 772 LYS LYS A . n A 1 476 GLU 476 773 773 GLU GLU A . n A 1 477 VAL 477 774 774 VAL VAL A . n A 1 478 ILE 478 775 775 ILE ILE A . n A 1 479 SER 479 776 776 SER SER A . n A 1 480 LYS 480 777 777 LYS LYS A . n A 1 481 PHE 481 778 778 PHE PHE A . n A 1 482 ARG 482 779 779 ARG ARG A . n A 1 483 THR 483 780 780 THR THR A . n A 1 484 GLY 484 781 781 GLY GLY A . n A 1 485 LYS 485 782 782 LYS LYS A . n A 1 486 ILE 486 783 783 ILE ILE A . n A 1 487 ASN 487 784 784 ASN ASN A . n A 1 488 LEU 488 785 785 LEU LEU A . n A 1 489 LEU 489 786 786 LEU LEU A . n A 1 490 ILE 490 787 787 ILE ILE A . n A 1 491 ALA 491 788 788 ALA ALA A . n A 1 492 THR 492 789 789 THR THR A . n A 1 493 THR 493 790 790 THR THR A . n A 1 494 VAL 494 791 791 VAL VAL A . n A 1 495 ALA 495 792 792 ALA ALA A . n A 1 496 GLU 496 793 793 GLU GLU A . n A 1 497 GLU 497 794 794 GLU GLU A . n A 1 498 GLY 498 795 795 GLY GLY A . n A 1 499 LEU 499 796 796 LEU LEU A . n A 1 500 ASP 500 797 797 ASP ASP A . n A 1 501 ILE 501 798 798 ILE ILE A . n A 1 502 LYS 502 799 799 LYS LYS A . n A 1 503 GLU 503 800 800 GLU GLU A . n A 1 504 CYS 504 801 801 CYS CYS A . n A 1 505 ASN 505 802 802 ASN ASN A . n A 1 506 ILE 506 803 803 ILE ILE A . n A 1 507 VAL 507 804 804 VAL VAL A . n A 1 508 ILE 508 805 805 ILE ILE A . n A 1 509 ARG 509 806 806 ARG ARG A . n A 1 510 TYR 510 807 807 TYR TYR A . n A 1 511 GLY 511 808 808 GLY GLY A . n A 1 512 LEU 512 809 809 LEU LEU A . n A 1 513 VAL 513 810 810 VAL VAL A . n A 1 514 THR 514 811 811 THR THR A . n A 1 515 ASN 515 812 812 ASN ASN A . n A 1 516 GLU 516 813 813 GLU GLU A . n A 1 517 ILE 517 814 814 ILE ILE A . n A 1 518 ALA 518 815 815 ALA ALA A . n A 1 519 MET 519 816 816 MET MET A . n A 1 520 VAL 520 817 817 VAL VAL A . n A 1 521 GLN 521 818 818 GLN GLN A . n A 1 522 ALA 522 819 819 ALA ALA A . n A 1 523 ARG 523 820 820 ARG ARG A . n A 1 524 GLY 524 821 821 GLY GLY A . n A 1 525 ARG 525 822 822 ARG ARG A . n A 1 526 ALA 526 823 823 ALA ALA A . n A 1 527 ARG 527 824 824 ARG ARG A . n A 1 528 ALA 528 825 825 ALA ALA A . n A 1 529 ASP 529 826 826 ASP ASP A . n A 1 530 GLU 530 827 827 GLU GLU A . n A 1 531 SER 531 828 828 SER SER A . n A 1 532 THR 532 829 829 THR THR A . n A 1 533 TYR 533 830 830 TYR TYR A . n A 1 534 VAL 534 831 831 VAL VAL A . n A 1 535 LEU 535 832 832 LEU LEU A . n A 1 536 VAL 536 833 833 VAL VAL A . n A 1 537 ALA 537 834 834 ALA ALA A . n A 1 538 HIS 538 835 835 HIS HIS A . n A 1 539 SER 539 836 836 SER SER A . n A 1 540 GLY 540 837 837 GLY GLY A . n A 1 541 SER 541 838 838 SER SER A . n A 1 542 GLY 542 839 839 GLY GLY A . n A 1 543 VAL 543 840 840 VAL VAL A . n A 1 544 ILE 544 841 841 ILE ILE A . n A 1 545 GLU 545 842 842 GLU GLU A . n A 1 546 HIS 546 843 843 HIS HIS A . n A 1 547 GLU 547 844 844 GLU GLU A . n A 1 548 THR 548 845 845 THR THR A . n A 1 549 VAL 549 846 846 VAL VAL A . n A 1 550 ASN 550 847 847 ASN ASN A . n A 1 551 ASP 551 848 848 ASP ASP A . n A 1 552 PHE 552 849 849 PHE PHE A . n A 1 553 ARG 553 850 850 ARG ARG A . n A 1 554 GLU 554 851 851 GLU GLU A . n A 1 555 LYS 555 852 852 LYS LYS A . n A 1 556 MET 556 853 853 MET MET A . n A 1 557 MET 557 854 854 MET MET A . n A 1 558 TYR 558 855 855 TYR TYR A . n A 1 559 LYS 559 856 856 LYS LYS A . n A 1 560 ALA 560 857 857 ALA ALA A . n A 1 561 ILE 561 858 858 ILE ILE A . n A 1 562 HIS 562 859 859 HIS HIS A . n A 1 563 CYS 563 860 860 CYS CYS A . n A 1 564 VAL 564 861 861 VAL VAL A . n A 1 565 GLN 565 862 862 GLN GLN A . n A 1 566 ASN 566 863 863 ASN ASN A . n A 1 567 MET 567 864 864 MET MET A . n A 1 568 LYS 568 865 865 LYS LYS A . n A 1 569 PRO 569 866 866 PRO PRO A . n A 1 570 GLU 570 867 867 GLU GLU A . n A 1 571 GLU 571 868 868 GLU GLU A . n A 1 572 TYR 572 869 869 TYR TYR A . n A 1 573 ALA 573 870 870 ALA ALA A . n A 1 574 HIS 574 871 871 HIS HIS A . n A 1 575 LYS 575 872 872 LYS LYS A . n A 1 576 ILE 576 873 873 ILE ILE A . n A 1 577 LEU 577 874 874 LEU LEU A . n A 1 578 GLU 578 875 875 GLU GLU A . n A 1 579 LEU 579 876 876 LEU LEU A . n A 1 580 GLN 580 877 877 GLN GLN A . n A 1 581 MET 581 878 878 MET MET A . n A 1 582 GLN 582 879 879 GLN GLN A . n A 1 583 SER 583 880 880 SER SER A . n A 1 584 ILE 584 881 881 ILE ILE A . n A 1 585 MET 585 882 882 MET MET A . n A 1 586 GLU 586 883 883 GLU GLU A . n A 1 587 LYS 587 884 884 LYS LYS A . n A 1 588 LYS 588 885 885 LYS LYS A . n A 1 589 MET 589 886 886 MET MET A . n A 1 590 LYS 590 887 887 LYS LYS A . n A 1 591 THR 591 888 888 THR THR A . n A 1 592 LYS 592 889 889 LYS LYS A . n A 1 593 ARG 593 890 890 ARG ARG A . n A 1 594 ASN 594 891 891 ASN ASN A . n A 1 595 ILE 595 892 892 ILE ILE A . n A 1 596 ALA 596 893 893 ALA ALA A . n A 1 597 LYS 597 894 894 LYS LYS A . n A 1 598 HIS 598 895 895 HIS HIS A . n A 1 599 TYR 599 896 896 TYR TYR A . n A 1 600 LYS 600 897 897 LYS LYS A . n A 1 601 ASN 601 898 898 ASN ASN A . n A 1 602 ASN 602 899 899 ASN ASN A . n A 1 603 PRO 603 900 900 PRO PRO A . n A 1 604 SER 604 901 901 SER SER A . n A 1 605 LEU 605 902 902 LEU LEU A . n A 1 606 ILE 606 903 903 ILE ILE A . n A 1 607 THR 607 904 904 THR THR A . n A 1 608 PHE 608 905 905 PHE PHE A . n A 1 609 LEU 609 906 906 LEU LEU A . n A 1 610 CYS 610 907 907 CYS CYS A . n A 1 611 LYS 611 908 908 LYS LYS A . n A 1 612 ASN 612 909 909 ASN ASN A . n A 1 613 CYS 613 910 910 CYS CYS A . n A 1 614 SER 614 911 911 SER SER A . n A 1 615 VAL 615 912 912 VAL VAL A . n A 1 616 LEU 616 913 913 LEU LEU A . n A 1 617 ALA 617 914 914 ALA ALA A . n A 1 618 CYS 618 915 915 CYS CYS A . n A 1 619 SER 619 916 916 SER SER A . n A 1 620 GLY 620 917 917 GLY GLY A . n A 1 621 GLU 621 918 918 GLU GLU A . n A 1 622 ASP 622 919 919 ASP ASP A . n A 1 623 ILE 623 920 920 ILE ILE A . n A 1 624 HIS 624 921 921 HIS HIS A . n A 1 625 VAL 625 922 922 VAL VAL A . n A 1 626 ILE 626 923 923 ILE ILE A . n A 1 627 GLU 627 924 924 GLU GLU A . n A 1 628 LYS 628 925 925 LYS LYS A . n A 1 629 MET 629 926 926 MET MET A . n A 1 630 HIS 630 927 927 HIS HIS A . n A 1 631 HIS 631 928 928 HIS HIS A . n A 1 632 VAL 632 929 929 VAL VAL A . n A 1 633 ASN 633 930 930 ASN ASN A . n A 1 634 MET 634 931 931 MET MET A . n A 1 635 THR 635 932 932 THR THR A . n A 1 636 PRO 636 933 933 PRO PRO A . n A 1 637 GLU 637 934 934 GLU GLU A . n A 1 638 PHE 638 935 935 PHE PHE A . n A 1 639 LYS 639 936 936 LYS LYS A . n A 1 640 GLU 640 937 937 GLU GLU A . n A 1 641 LEU 641 938 938 LEU LEU A . n A 1 642 TYR 642 939 939 TYR TYR A . n A 1 643 ILE 643 940 940 ILE ILE A . n A 1 644 VAL 644 941 941 VAL VAL A . n A 1 645 ARG 645 942 942 ARG ARG A . n A 1 646 GLU 646 943 ? ? ? A . n A 1 647 ASN 647 944 ? ? ? A . n A 1 648 LYS 648 945 ? ? ? A . n A 1 649 ALA 649 946 ? ? ? A . n A 1 650 LEU 650 947 ? ? ? A . n A 1 651 GLN 651 948 ? ? ? A . n A 1 652 LYS 652 949 ? ? ? A . n A 1 653 LYS 653 950 ? ? ? A . n A 1 654 CYS 654 951 ? ? ? A . n A 1 655 ALA 655 952 ? ? ? A . n A 1 656 ASP 656 953 ? ? ? A . n A 1 657 TYR 657 954 ? ? ? A . n A 1 658 GLN 658 955 ? ? ? A . n A 1 659 ILE 659 956 ? ? ? A . n A 1 660 ASN 660 957 957 ASN ASN A . n A 1 661 GLY 661 958 958 GLY GLY A . n A 1 662 GLU 662 959 959 GLU GLU A . n A 1 663 ILE 663 960 960 ILE ILE A . n A 1 664 ILE 664 961 961 ILE ILE A . n A 1 665 CYS 665 962 962 CYS CYS A . n A 1 666 LYS 666 963 963 LYS LYS A . n A 1 667 CYS 667 964 964 CYS CYS A . n A 1 668 GLY 668 965 965 GLY GLY A . n A 1 669 GLN 669 966 966 GLN GLN A . n A 1 670 ALA 670 967 967 ALA ALA A . n A 1 671 TRP 671 968 968 TRP TRP A . n A 1 672 GLY 672 969 969 GLY GLY A . n A 1 673 THR 673 970 970 THR THR A . n A 1 674 MET 674 971 971 MET MET A . n A 1 675 MET 675 972 972 MET MET A . n A 1 676 VAL 676 973 973 VAL VAL A . n A 1 677 HIS 677 974 974 HIS HIS A . n A 1 678 LYS 678 975 975 LYS LYS A . n A 1 679 GLY 679 976 976 GLY GLY A . n A 1 680 LEU 680 977 977 LEU LEU A . n A 1 681 ASP 681 978 978 ASP ASP A . n A 1 682 LEU 682 979 979 LEU LEU A . n A 1 683 PRO 683 980 980 PRO PRO A . n A 1 684 CYS 684 981 981 CYS CYS A . n A 1 685 LEU 685 982 982 LEU LEU A . n A 1 686 LYS 686 983 983 LYS LYS A . n A 1 687 ILE 687 984 984 ILE ILE A . n A 1 688 ARG 688 985 985 ARG ARG A . n A 1 689 ASN 689 986 986 ASN ASN A . n A 1 690 PHE 690 987 987 PHE PHE A . n A 1 691 VAL 691 988 988 VAL VAL A . n A 1 692 VAL 692 989 989 VAL VAL A . n A 1 693 VAL 693 990 990 VAL VAL A . n A 1 694 PHE 694 991 991 PHE PHE A . n A 1 695 LYS 695 992 992 LYS LYS A . n A 1 696 ASN 696 993 993 ASN ASN A . n A 1 697 ASN 697 994 994 ASN ASN A . n A 1 698 SER 698 995 995 SER SER A . n A 1 699 THR 699 996 996 THR THR A . n A 1 700 LYS 700 997 997 LYS LYS A . n A 1 701 LYS 701 998 998 LYS LYS A . n A 1 702 GLN 702 999 999 GLN GLN A . n A 1 703 TYR 703 1000 1000 TYR TYR A . n A 1 704 LYS 704 1001 1001 LYS LYS A . n A 1 705 LYS 705 1002 1002 LYS LYS A . n A 1 706 TRP 706 1003 1003 TRP TRP A . n A 1 707 VAL 707 1004 1004 VAL VAL A . n A 1 708 GLU 708 1005 1005 GLU GLU A . n A 1 709 LEU 709 1006 1006 LEU LEU A . n A 1 710 PRO 710 1007 1007 PRO PRO A . n A 1 711 ILE 711 1008 1008 ILE ILE A . n A 1 712 THR 712 1009 1009 THR THR A . n A 1 713 PHE 713 1010 1010 PHE PHE A . n A 1 714 PRO 714 1011 1011 PRO PRO A . n A 1 715 ASN 715 1012 1012 ASN ASN A . n A 1 716 LEU 716 1013 1013 LEU LEU A . n A 1 717 ASP 717 1014 1014 ASP ASP A . n A 1 718 TYR 718 1015 1015 TYR TYR A . n A 1 719 SER 719 1016 1016 SER SER A . n A 1 720 GLU 720 1017 1017 GLU GLU A . n A 1 721 CYS 721 1018 ? ? ? A . n A 1 722 CYS 722 1019 ? ? ? A . n A 1 723 LEU 723 1020 ? ? ? A . n A 1 724 PHE 724 1021 ? ? ? A . n A 1 725 SER 725 1022 ? ? ? A . n A 1 726 ASP 726 1023 ? ? ? A . n A 1 727 GLU 727 1024 ? ? ? A . n A 1 728 ASP 728 1025 ? ? ? A . n B 2 1 C 1 1 1 C C B . n B 2 2 G 2 2 2 G G B . n B 2 3 G 3 3 3 G G B . n B 2 4 U 4 4 4 U U B . n B 2 5 U 5 5 5 U U B . n B 2 6 A 6 6 6 A A B . n B 2 7 G 7 7 7 G G B . n B 2 8 G 8 8 8 G G B . n B 2 9 G 9 9 9 G G B . n B 2 10 G 10 10 10 G G B . n B 2 11 C 11 11 11 C C B . n B 2 12 U 12 12 12 U U B . n B 2 13 A 13 13 13 A A B . n C 3 1 U 1 1 1 U U C . n C 3 2 A 2 2 2 A A C . n C 3 3 G 3 3 3 G G C . n C 3 4 C 4 4 4 C C C . n C 3 5 C 5 5 5 C C C . n C 3 6 C 6 6 6 C C C . n C 3 7 C 7 7 7 C C C . n C 3 8 U 8 8 8 U U C . n C 3 9 A 9 9 9 A A C . n C 3 10 A 10 10 10 A A C . n C 3 11 C 11 11 11 C C C . n C 3 12 C 12 12 12 C C C . n C 3 13 G 13 13 13 G G C . n # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 ANP ? ? ANP ? ? 'SUBJECT OF INVESTIGATION' ? 2 MG ? ? MG ? ? 'SUBJECT OF INVESTIGATION' ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 ANP 1 1101 1 ANP ANP A . E 5 MG 1 1102 1 MG MG A . F 5 MG 1 1103 2 MG MG A . G 6 HOH 1 1201 10 HOH HOH A . G 6 HOH 2 1202 7 HOH HOH A . # _pdbx_unobs_or_zero_occ_atoms.id 1 _pdbx_unobs_or_zero_occ_atoms.PDB_model_num 1 _pdbx_unobs_or_zero_occ_atoms.polymer_flag Y _pdbx_unobs_or_zero_occ_atoms.occupancy_flag 1 _pdbx_unobs_or_zero_occ_atoms.auth_asym_id A _pdbx_unobs_or_zero_occ_atoms.auth_comp_id LEU _pdbx_unobs_or_zero_occ_atoms.auth_seq_id 306 _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code ? _pdbx_unobs_or_zero_occ_atoms.auth_atom_id N _pdbx_unobs_or_zero_occ_atoms.label_alt_id ? _pdbx_unobs_or_zero_occ_atoms.label_asym_id A _pdbx_unobs_or_zero_occ_atoms.label_comp_id LEU _pdbx_unobs_or_zero_occ_atoms.label_seq_id 9 _pdbx_unobs_or_zero_occ_atoms.label_atom_id N # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9Y4J _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9Y4J _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9Y4J _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.entry_id 9Y4J _refine.pdbx_diffrn_id ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high . _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_Zscore _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.004 ? 6096 ? f_bond_d ? ? ? 'ELECTRON MICROSCOPY' ? 0.709 ? 8330 ? f_angle_d ? ? ? 'ELECTRON MICROSCOPY' ? 9.229 ? 1024 ? f_dihedral_angle_d ? ? ? 'ELECTRON MICROSCOPY' ? 0.047 ? 958 ? f_chiral_restr ? ? ? 'ELECTRON MICROSCOPY' ? 0.005 ? 957 ? f_plane_restr ? ? ? # _struct.entry_id 9Y4J _struct.title 'CryoEM Structure of human MDA5 with dsRNA (one protein subunit on dsRNA)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9Y4J _struct_keywords.text 'RLR, MDA5, signaling, filament, dsRNA, IMMUNE SYSTEM' _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 6 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP IFIH1_HUMAN Q9BYX4 ? 1 ;ARASPEPELQLRPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVIVLVNKVLLVEQLFRKEF QPFLKKWYRVIGLSGDTQLKISFPEVVKSCDIIISTAQILENSLLNLENGEDAGVQLSDFSLIIIDECHHTNKEAVYNNI MRHYLMQKLKNNRLKKENKPVIPLPQILGLTASPGVGGATKQAKAEEHILKLCANLDAFTIKTVKENLDQLKNQIQEPCK KFAIADATREDPFKEKLLEIMTRIQTYCQMSPMSDFGTQPYEQWAIQMEKKAAKEGNRKERVCAEHLRKYNEALQINDTI RMIDAYTHLETFYNEEKDKKFAVIEDDSDEGGDDEYCDGDEDEDDLKKPLKLDETDRFLMTLFFENNKMLKRLAENPEYE NEKLTKLRNTIMEQYTRTEESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLIGAGHSSEFKPMTQNEQKEVISK FRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVAHSGSGVIEHETVNDFREKMMYKA IHCVQNMKPEEYAHKILELQMQSIMEKKMKTKRNIAKHYKNNPSLITFLCKNCSVLACSGEDIHVIEKMHHVNMTPEFKE LYIVRENKALQKKCADYQINGEIICKCGQAWGTMMVHKGLDLPCLKIRNFVVVFKNNSTKKQYKKWVELPITFPNLDYSE CCLFSDED ; 298 2 PDB 9Y4J 9Y4J ? 2 ? 1 3 PDB 9Y4J 9Y4J ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9Y4J A 1 ? 728 ? Q9BYX4 298 ? 1025 ? 298 1025 2 2 9Y4J B 1 ? 13 ? 9Y4J 1 ? 13 ? 1 13 3 3 9Y4J C 1 ? 13 ? 9Y4J 1 ? 13 ? 1 13 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ARG A 12 ? GLN A 20 ? ARG A 309 GLN A 317 1 ? 9 HELX_P HELX_P2 AA2 GLY A 37 ? ALA A 56 ? GLY A 334 ALA A 353 1 ? 20 HELX_P HELX_P3 AA3 LYS A 68 ? LYS A 78 ? LYS A 365 LYS A 375 1 ? 11 HELX_P HELX_P4 AA4 PHE A 80 ? LYS A 85 ? PHE A 377 LYS A 382 1 ? 6 HELX_P HELX_P5 AA5 SER A 102 ? CYS A 110 ? SER A 399 CYS A 407 1 ? 9 HELX_P HELX_P6 AA6 ALA A 117 ? LEU A 125 ? ALA A 414 LEU A 422 1 ? 9 HELX_P HELX_P7 AA7 GLN A 136 ? PHE A 140 ? GLN A 433 PHE A 437 5 ? 5 HELX_P HELX_P8 AA8 CYS A 148 ? THR A 151 ? CYS A 445 THR A 448 5 ? 4 HELX_P HELX_P9 AA9 ALA A 155 ? LYS A 176 ? ALA A 452 LYS A 473 1 ? 22 HELX_P HELX_P10 AB1 LYS A 201 ? LEU A 216 ? LYS A 498 LEU A 513 1 ? 16 HELX_P HELX_P11 AB2 ASN A 227 ? ILE A 235 ? ASN A 524 ILE A 532 1 ? 9 HELX_P HELX_P12 AB3 ASP A 251 ? CYS A 268 ? ASP A 548 CYS A 565 1 ? 18 HELX_P HELX_P13 AB4 THR A 278 ? GLY A 296 ? THR A 575 GLY A 593 1 ? 19 HELX_P HELX_P14 AB5 ASN A 297 ? ILE A 320 ? ASN A 594 ILE A 617 1 ? 24 HELX_P HELX_P15 AB6 ARG A 321 ? LYS A 340 ? ARG A 618 LYS A 637 1 ? 20 HELX_P HELX_P16 AB7 ASP A 373 ? GLU A 385 ? ASP A 670 GLU A 682 1 ? 13 HELX_P HELX_P17 AB8 ASN A 386 ? GLU A 395 ? ASN A 683 GLU A 692 1 ? 10 HELX_P HELX_P18 AB9 ASN A 396 ? GLU A 400 ? ASN A 693 GLU A 697 5 ? 5 HELX_P HELX_P19 AC1 ASN A 401 ? TYR A 415 ? ASN A 698 TYR A 712 1 ? 15 HELX_P HELX_P20 AC2 THR A 430 ? GLU A 443 ? THR A 727 GLU A 740 1 ? 14 HELX_P HELX_P21 AC3 ASN A 444 ? VAL A 450 ? ASN A 741 VAL A 747 1 ? 7 HELX_P HELX_P22 AC4 THR A 470 ? ARG A 482 ? THR A 767 ARG A 779 1 ? 13 HELX_P HELX_P23 AC5 ASN A 515 ? GLY A 524 ? ASN A 812 GLY A 821 1 ? 10 HELX_P HELX_P24 AC6 GLY A 542 ? ASN A 566 ? GLY A 839 ASN A 863 1 ? 25 HELX_P HELX_P25 AC7 LYS A 568 ? MET A 589 ? LYS A 865 MET A 886 1 ? 22 HELX_P HELX_P26 AC8 LYS A 590 ? LYS A 597 ? LYS A 887 LYS A 894 1 ? 8 HELX_P HELX_P27 AC9 ASN A 602 ? SER A 604 ? ASN A 899 SER A 901 5 ? 3 HELX_P HELX_P28 AD1 THR A 635 ? GLU A 640 ? THR A 932 GLU A 937 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 613 SG ? ? ? 1_555 A CYS 667 SG ? ? A CYS 910 A CYS 964 1_555 ? ? ? ? ? ? ? 2.036 ? ? metalc1 metalc ? ? D ANP . O3G ? ? ? 1_555 E MG . MG ? ? A ANP 1101 A MG 1102 1_555 ? ? ? ? ? ? ? 2.091 ? ? metalc2 metalc ? ? D ANP . O2B ? ? ? 1_555 E MG . MG ? ? A ANP 1101 A MG 1102 1_555 ? ? ? ? ? ? ? 2.593 ? ? metalc3 metalc ? ? D ANP . O3A ? ? ? 1_555 F MG . MG ? ? A ANP 1101 A MG 1103 1_555 ? ? ? ? ? ? ? 2.919 ? ? hydrog1 hydrog ? ? B C 1 N3 ? ? ? 1_555 C G 13 N1 ? ? B C 1 C G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B C 1 N4 ? ? ? 1_555 C G 13 O6 ? ? B C 1 C G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B C 1 O2 ? ? ? 1_555 C G 13 N2 ? ? B C 1 C G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B G 2 N1 ? ? ? 1_555 C C 12 N3 ? ? B G 2 C C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B G 2 N2 ? ? ? 1_555 C C 12 O2 ? ? B G 2 C C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B G 2 O6 ? ? ? 1_555 C C 12 N4 ? ? B G 2 C C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B G 3 N1 ? ? ? 1_555 C C 11 N3 ? ? B G 3 C C 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B G 3 N2 ? ? ? 1_555 C C 11 O2 ? ? B G 3 C C 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B G 3 O6 ? ? ? 1_555 C C 11 N4 ? ? B G 3 C C 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B U 4 N3 ? ? ? 1_555 C A 10 N1 ? ? B U 4 C A 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B U 4 O4 ? ? ? 1_555 C A 10 N6 ? ? B U 4 C A 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B U 5 N3 ? ? ? 1_555 C A 9 N1 ? ? B U 5 C A 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B U 5 O4 ? ? ? 1_555 C A 9 N6 ? ? B U 5 C A 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B A 6 N1 ? ? ? 1_555 C U 8 N3 ? ? B A 6 C U 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B A 6 N6 ? ? ? 1_555 C U 8 O4 ? ? B A 6 C U 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B G 7 N1 ? ? ? 1_555 C C 7 N3 ? ? B G 7 C C 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B G 7 N2 ? ? ? 1_555 C C 7 O2 ? ? B G 7 C C 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B G 7 O6 ? ? ? 1_555 C C 7 N4 ? ? B G 7 C C 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B G 8 N1 ? ? ? 1_555 C C 6 N3 ? ? B G 8 C C 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B G 8 N2 ? ? ? 1_555 C C 6 O2 ? ? B G 8 C C 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B G 8 O6 ? ? ? 1_555 C C 6 N4 ? ? B G 8 C C 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B G 9 N1 ? ? ? 1_555 C C 5 N3 ? ? B G 9 C C 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B G 9 N2 ? ? ? 1_555 C C 5 O2 ? ? B G 9 C C 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B G 9 O6 ? ? ? 1_555 C C 5 N4 ? ? B G 9 C C 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B G 10 N1 ? ? ? 1_555 C C 4 N3 ? ? B G 10 C C 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B G 10 N2 ? ? ? 1_555 C C 4 O2 ? ? B G 10 C C 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B G 10 O6 ? ? ? 1_555 C C 4 N4 ? ? B G 10 C C 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B C 11 N3 ? ? ? 1_555 C G 3 N1 ? ? B C 11 C G 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B C 11 N4 ? ? ? 1_555 C G 3 O6 ? ? B C 11 C G 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B C 11 O2 ? ? ? 1_555 C G 3 N2 ? ? B C 11 C G 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B U 12 N3 ? ? ? 1_555 C A 2 N1 ? ? B U 12 C A 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B U 12 O4 ? ? ? 1_555 C A 2 N6 ? ? B U 12 C A 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B A 13 N1 ? ? ? 1_555 C U 1 N3 ? ? B A 13 C U 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? B A 13 N6 ? ? ? 1_555 C U 1 O4 ? ? B A 13 C U 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? hydrog ? ? # _pdbx_struct_conn_angle.id 1 _pdbx_struct_conn_angle.ptnr1_label_atom_id O3G _pdbx_struct_conn_angle.ptnr1_label_alt_id ? _pdbx_struct_conn_angle.ptnr1_label_asym_id D _pdbx_struct_conn_angle.ptnr1_label_comp_id ANP _pdbx_struct_conn_angle.ptnr1_label_seq_id . _pdbx_struct_conn_angle.ptnr1_auth_atom_id ? _pdbx_struct_conn_angle.ptnr1_auth_asym_id A _pdbx_struct_conn_angle.ptnr1_auth_comp_id ANP _pdbx_struct_conn_angle.ptnr1_auth_seq_id 1101 _pdbx_struct_conn_angle.ptnr1_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr1_symmetry 1_555 _pdbx_struct_conn_angle.ptnr2_label_atom_id MG _pdbx_struct_conn_angle.ptnr2_label_alt_id ? _pdbx_struct_conn_angle.ptnr2_label_asym_id E _pdbx_struct_conn_angle.ptnr2_label_comp_id MG _pdbx_struct_conn_angle.ptnr2_label_seq_id . _pdbx_struct_conn_angle.ptnr2_auth_atom_id ? _pdbx_struct_conn_angle.ptnr2_auth_asym_id A _pdbx_struct_conn_angle.ptnr2_auth_comp_id MG _pdbx_struct_conn_angle.ptnr2_auth_seq_id 1102 _pdbx_struct_conn_angle.ptnr2_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr2_symmetry 1_555 _pdbx_struct_conn_angle.ptnr3_label_atom_id O2B _pdbx_struct_conn_angle.ptnr3_label_alt_id ? _pdbx_struct_conn_angle.ptnr3_label_asym_id D _pdbx_struct_conn_angle.ptnr3_label_comp_id ANP _pdbx_struct_conn_angle.ptnr3_label_seq_id . _pdbx_struct_conn_angle.ptnr3_auth_atom_id ? _pdbx_struct_conn_angle.ptnr3_auth_asym_id A _pdbx_struct_conn_angle.ptnr3_auth_comp_id ANP _pdbx_struct_conn_angle.ptnr3_auth_seq_id 1101 _pdbx_struct_conn_angle.ptnr3_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr3_symmetry 1_555 _pdbx_struct_conn_angle.value 57.5 _pdbx_struct_conn_angle.value_esd ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id CYS _pdbx_modification_feature.label_asym_id A _pdbx_modification_feature.label_seq_id 613 _pdbx_modification_feature.label_alt_id ? _pdbx_modification_feature.modified_residue_label_comp_id CYS _pdbx_modification_feature.modified_residue_label_asym_id A _pdbx_modification_feature.modified_residue_label_seq_id 667 _pdbx_modification_feature.modified_residue_label_alt_id ? _pdbx_modification_feature.auth_comp_id CYS _pdbx_modification_feature.auth_asym_id A _pdbx_modification_feature.auth_seq_id 910 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id CYS _pdbx_modification_feature.modified_residue_auth_asym_id A _pdbx_modification_feature.modified_residue_auth_seq_id 964 _pdbx_modification_feature.modified_residue_PDB_ins_code ? _pdbx_modification_feature.modified_residue_symmetry 1_555 _pdbx_modification_feature.comp_id_linking_atom SG _pdbx_modification_feature.modified_residue_id_linking_atom SG _pdbx_modification_feature.modified_residue_id . _pdbx_modification_feature.ref_pcm_id . _pdbx_modification_feature.ref_comp_id . _pdbx_modification_feature.type None _pdbx_modification_feature.category 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 7 ? AA2 ? 6 ? AA3 ? 4 ? AA4 ? 2 ? AA5 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA1 5 6 ? parallel AA1 6 7 ? parallel AA2 1 2 ? parallel AA2 2 3 ? parallel AA2 3 4 ? parallel AA2 4 5 ? parallel AA2 5 6 ? parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA4 1 2 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 90 ? LEU A 93 ? VAL A 387 LEU A 390 AA1 2 ILE A 112 ? THR A 116 ? ILE A 409 THR A 413 AA1 3 VAL A 62 ? VAL A 66 ? VAL A 359 VAL A 363 AA1 4 LEU A 142 ? ASP A 146 ? LEU A 439 ASP A 443 AA1 5 GLN A 186 ? THR A 191 ? GLN A 483 THR A 488 AA1 6 ILE A 28 ? CYS A 31 ? ILE A 325 CYS A 328 AA1 7 THR A 220 ? THR A 223 ? THR A 517 THR A 520 AA2 1 CYS A 239 ? ALA A 245 ? CYS A 536 ALA A 542 AA2 2 THR A 532 ? HIS A 538 ? THR A 829 HIS A 835 AA2 3 ILE A 506 ? TYR A 510 ? ILE A 803 TYR A 807 AA2 4 GLY A 424 ? PHE A 427 ? GLY A 721 PHE A 724 AA2 5 ILE A 490 ? THR A 493 ? ILE A 787 THR A 790 AA2 6 ALA A 454 ? LEU A 457 ? ALA A 751 LEU A 754 AA3 1 LEU A 616 ? SER A 619 ? LEU A 913 SER A 916 AA3 2 ILE A 606 ? CYS A 610 ? ILE A 903 CYS A 907 AA3 3 PHE A 690 ? PHE A 694 ? PHE A 987 PHE A 991 AA3 4 LYS A 700 ? LYS A 701 ? LYS A 997 LYS A 998 AA4 1 ILE A 623 ? ILE A 626 ? ILE A 920 ILE A 923 AA4 2 HIS A 630 ? ASN A 633 ? HIS A 927 ASN A 930 AA5 1 TYR A 642 ? VAL A 644 ? TYR A 939 VAL A 941 AA5 2 GLU A 662 ? CYS A 665 ? GLU A 959 CYS A 962 AA5 3 ALA A 670 ? HIS A 677 ? ALA A 967 HIS A 974 AA5 4 LEU A 680 ? LEU A 685 ? LEU A 977 LEU A 982 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LEU A 93 ? N LEU A 390 O ILE A 114 ? O ILE A 411 AA1 2 3 O ILE A 113 ? O ILE A 410 N VAL A 64 ? N VAL A 361 AA1 3 4 N LEU A 65 ? N LEU A 362 O ILE A 144 ? O ILE A 441 AA1 4 5 N ILE A 143 ? N ILE A 440 O GLN A 186 ? O GLN A 483 AA1 5 6 O GLY A 189 ? O GLY A 486 N ILE A 30 ? N ILE A 327 AA1 6 7 N ILE A 29 ? N ILE A 326 O LYS A 222 ? O LYS A 519 AA2 1 2 N CYS A 239 ? N CYS A 536 O TYR A 533 ? O TYR A 830 AA2 2 3 O VAL A 534 ? O VAL A 831 N ARG A 509 ? N ARG A 806 AA2 3 4 O ILE A 508 ? O ILE A 805 N PHE A 427 ? N PHE A 724 AA2 4 5 N ILE A 426 ? N ILE A 723 O THR A 493 ? O THR A 790 AA2 5 6 O THR A 492 ? O THR A 789 N HIS A 455 ? N HIS A 752 AA3 1 2 O ALA A 617 ? O ALA A 914 N PHE A 608 ? N PHE A 905 AA3 2 3 N LEU A 609 ? N LEU A 906 O VAL A 691 ? O VAL A 988 AA3 3 4 N VAL A 692 ? N VAL A 989 O LYS A 701 ? O LYS A 998 AA4 1 2 N ILE A 626 ? N ILE A 923 O HIS A 630 ? O HIS A 927 AA5 1 2 N ILE A 643 ? N ILE A 940 O ILE A 664 ? O ILE A 961 AA5 2 3 N ILE A 663 ? N ILE A 960 O TRP A 671 ? O TRP A 968 AA5 3 4 N THR A 673 ? N THR A 970 O CYS A 684 ? O CYS A 981 # _pdbx_entry_details.entry_id 9Y4J _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 LEU _pdbx_validate_close_contact.auth_seq_id_1 471 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 CB _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 LYS _pdbx_validate_close_contact.auth_seq_id_2 476 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.85 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C A ASN 475 ? ? N A LYS 476 ? ? 1.495 1.336 0.159 0.023 Y 2 1 CA A LYS 782 ? ? C A LYS 782 ? ? 1.357 1.525 -0.168 0.026 N 3 1 C A LYS 782 ? ? O A LYS 782 ? ? 1.069 1.229 -0.160 0.019 N 4 1 C A THR 789 ? ? O A THR 789 ? ? 1.111 1.229 -0.118 0.019 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 O A ASN 475 ? ? C A ASN 475 ? ? N A LYS 476 ? ? 106.71 122.70 -15.99 1.60 Y 2 1 N A LYS 476 ? ? CA A LYS 476 ? ? C A LYS 476 ? ? 128.66 111.00 17.66 2.70 N 3 1 CA A LYS 476 ? ? C A LYS 476 ? ? N A PRO 477 ? ? 99.54 117.10 -17.56 2.80 Y 4 1 C A LYS 476 ? ? N A PRO 477 ? ? CA A PRO 477 ? ? 100.86 119.30 -18.44 1.50 Y 5 1 C A LYS 476 ? ? N A PRO 477 ? ? CD A PRO 477 ? ? 147.00 128.40 18.60 2.10 Y 6 1 CB A ARG 779 ? ? CA A ARG 779 ? ? C A ARG 779 ? ? 96.48 110.40 -13.92 2.00 N 7 1 N A ARG 779 ? ? CA A ARG 779 ? ? C A ARG 779 ? ? 132.96 111.00 21.96 2.70 N 8 1 N A GLY 781 ? ? CA A GLY 781 ? ? C A GLY 781 ? ? 95.57 113.10 -17.53 2.50 N 9 1 CB A LYS 782 ? ? CA A LYS 782 ? ? C A LYS 782 ? ? 96.44 110.40 -13.96 2.00 N 10 1 N A LYS 782 ? ? CA A LYS 782 ? ? C A LYS 782 ? ? 133.53 111.00 22.53 2.70 N 11 1 CA A LYS 782 ? ? C A LYS 782 ? ? O A LYS 782 ? ? 104.71 120.10 -15.39 2.10 N 12 1 CB A LEU 785 ? ? CG A LEU 785 ? ? CD2 A LEU 785 ? ? 99.74 111.00 -11.26 1.70 N 13 1 CB A MET 882 ? ? CA A MET 882 ? ? C A MET 882 ? ? 98.26 110.40 -12.14 2.00 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 336 ? ? -93.40 52.08 2 1 ARG A 337 ? ? -133.86 -37.86 3 1 GLU A 376 ? ? -120.15 -56.34 4 1 GLN A 415 ? ? -87.95 44.56 5 1 LYS A 450 ? ? 59.90 -132.45 6 1 GLN A 566 ? ? -100.61 69.65 7 1 GLU A 692 ? ? -95.14 58.63 8 1 VAL A 791 ? ? -98.70 -72.72 9 1 LEU A 796 ? ? -171.10 -171.83 10 1 VAL A 810 ? ? -124.71 -54.87 11 1 THR A 811 ? ? 59.48 -142.15 12 1 ASN A 899 ? ? 51.99 76.60 # loop_ _pdbx_validate_main_chain_plane.id _pdbx_validate_main_chain_plane.PDB_model_num _pdbx_validate_main_chain_plane.auth_comp_id _pdbx_validate_main_chain_plane.auth_asym_id _pdbx_validate_main_chain_plane.auth_seq_id _pdbx_validate_main_chain_plane.PDB_ins_code _pdbx_validate_main_chain_plane.label_alt_id _pdbx_validate_main_chain_plane.improper_torsion_angle 1 1 MET A 313 ? ? -12.45 2 1 ASN A 475 ? ? -21.70 3 1 LYS A 476 ? ? 14.07 4 1 PHE A 778 ? ? 10.38 5 1 LYS A 782 ? ? -12.02 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9Y4J _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 9Y4J _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 2.81 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 402040 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.5 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'CryoEM structure of MDA5 binds to dsRNA in presence of AMPPNP - one protein subunit on dsRNA' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1,2,3 # _em_imaging.entry_id 9Y4J _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 500 _em_imaging.nominal_defocus_max 2000 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? _em_imaging.objective_aperture ? _em_imaging.microscope_serial_number ? _em_imaging.microscope_version ? # _em_vitrification.entry_id 9Y4J _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 9Y4J _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 298 ? A ALA 1 2 1 Y 1 A ARG 299 ? A ARG 2 3 1 Y 1 A ALA 300 ? A ALA 3 4 1 Y 1 A SER 301 ? A SER 4 5 1 Y 1 A PRO 302 ? A PRO 5 6 1 Y 1 A GLU 303 ? A GLU 6 7 1 Y 1 A PRO 304 ? A PRO 7 8 1 Y 1 A GLU 305 ? A GLU 8 9 1 Y 1 A LEU 424 ? A LEU 127 10 1 Y 1 A GLU 425 ? A GLU 128 11 1 Y 1 A ASN 426 ? A ASN 129 12 1 Y 1 A GLY 427 ? A GLY 130 13 1 Y 1 A GLU 428 ? A GLU 131 14 1 Y 1 A ASP 429 ? A ASP 132 15 1 Y 1 A ILE 641 ? A ILE 344 16 1 Y 1 A GLU 642 ? A GLU 345 17 1 Y 1 A ASP 643 ? A ASP 346 18 1 Y 1 A ASP 644 ? A ASP 347 19 1 Y 1 A SER 645 ? A SER 348 20 1 Y 1 A ASP 646 ? A ASP 349 21 1 Y 1 A GLU 647 ? A GLU 350 22 1 Y 1 A GLY 648 ? A GLY 351 23 1 Y 1 A GLY 649 ? A GLY 352 24 1 Y 1 A ASP 650 ? A ASP 353 25 1 Y 1 A ASP 651 ? A ASP 354 26 1 Y 1 A GLU 652 ? A GLU 355 27 1 Y 1 A TYR 653 ? A TYR 356 28 1 Y 1 A CYS 654 ? A CYS 357 29 1 Y 1 A ASP 655 ? A ASP 358 30 1 Y 1 A GLY 656 ? A GLY 359 31 1 Y 1 A ASP 657 ? A ASP 360 32 1 Y 1 A GLU 658 ? A GLU 361 33 1 Y 1 A ASP 659 ? A ASP 362 34 1 Y 1 A GLU 660 ? A GLU 363 35 1 Y 1 A ASP 661 ? A ASP 364 36 1 Y 1 A ASP 662 ? A ASP 365 37 1 Y 1 A LEU 663 ? A LEU 366 38 1 Y 1 A LYS 664 ? A LYS 367 39 1 Y 1 A LYS 665 ? A LYS 368 40 1 Y 1 A PRO 666 ? A PRO 369 41 1 Y 1 A LEU 667 ? A LEU 370 42 1 Y 1 A LYS 668 ? A LYS 371 43 1 Y 1 A GLU 943 ? A GLU 646 44 1 Y 1 A ASN 944 ? A ASN 647 45 1 Y 1 A LYS 945 ? A LYS 648 46 1 Y 1 A ALA 946 ? A ALA 649 47 1 Y 1 A LEU 947 ? A LEU 650 48 1 Y 1 A GLN 948 ? A GLN 651 49 1 Y 1 A LYS 949 ? A LYS 652 50 1 Y 1 A LYS 950 ? A LYS 653 51 1 Y 1 A CYS 951 ? A CYS 654 52 1 Y 1 A ALA 952 ? A ALA 655 53 1 Y 1 A ASP 953 ? A ASP 656 54 1 Y 1 A TYR 954 ? A TYR 657 55 1 Y 1 A GLN 955 ? A GLN 658 56 1 Y 1 A ILE 956 ? A ILE 659 57 1 Y 1 A CYS 1018 ? A CYS 721 58 1 Y 1 A CYS 1019 ? A CYS 722 59 1 Y 1 A LEU 1020 ? A LEU 723 60 1 Y 1 A PHE 1021 ? A PHE 724 61 1 Y 1 A SER 1022 ? A SER 725 62 1 Y 1 A ASP 1023 ? A ASP 726 63 1 Y 1 A GLU 1024 ? A GLU 727 64 1 Y 1 A ASP 1025 ? A ASP 728 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ANP PG P N N 51 ANP O1G O N N 52 ANP O2G O N N 53 ANP O3G O N N 54 ANP PB P N N 55 ANP O1B O N N 56 ANP O2B O N N 57 ANP N3B N N N 58 ANP PA P N N 59 ANP O1A O N N 60 ANP O2A O N N 61 ANP O3A O N N 62 ANP "O5'" O N N 63 ANP "C5'" C N N 64 ANP "C4'" C N R 65 ANP "O4'" O N N 66 ANP "C3'" C N S 67 ANP "O3'" O N N 68 ANP "C2'" C N R 69 ANP "O2'" O N N 70 ANP "C1'" C N R 71 ANP N9 N Y N 72 ANP C8 C Y N 73 ANP N7 N Y N 74 ANP C5 C Y N 75 ANP C6 C Y N 76 ANP N6 N N N 77 ANP N1 N Y N 78 ANP C2 C Y N 79 ANP N3 N Y N 80 ANP C4 C Y N 81 ANP HOG2 H N N 82 ANP HOG3 H N N 83 ANP HOB2 H N N 84 ANP HNB1 H N N 85 ANP HOA2 H N N 86 ANP "H5'1" H N N 87 ANP "H5'2" H N N 88 ANP "H4'" H N N 89 ANP "H3'" H N N 90 ANP "HO3'" H N N 91 ANP "H2'" H N N 92 ANP "HO2'" H N N 93 ANP "H1'" H N N 94 ANP H8 H N N 95 ANP HN61 H N N 96 ANP HN62 H N N 97 ANP H2 H N N 98 ARG N N N N 99 ARG CA C N S 100 ARG C C N N 101 ARG O O N N 102 ARG CB C N N 103 ARG CG C N N 104 ARG CD C N N 105 ARG NE N N N 106 ARG CZ C N N 107 ARG NH1 N N N 108 ARG NH2 N N N 109 ARG OXT O N N 110 ARG H H N N 111 ARG H2 H N N 112 ARG HA H N N 113 ARG HB2 H N N 114 ARG HB3 H N N 115 ARG HG2 H N N 116 ARG HG3 H N N 117 ARG HD2 H N N 118 ARG HD3 H N N 119 ARG HE H N N 120 ARG HH11 H N N 121 ARG HH12 H N N 122 ARG HH21 H N N 123 ARG HH22 H N N 124 ARG HXT H N N 125 ASN N N N N 126 ASN CA C N S 127 ASN C C N N 128 ASN O O N N 129 ASN CB C N N 130 ASN CG C N N 131 ASN OD1 O N N 132 ASN ND2 N N N 133 ASN OXT O N N 134 ASN H H N N 135 ASN H2 H N N 136 ASN HA H N N 137 ASN HB2 H N N 138 ASN HB3 H N N 139 ASN HD21 H N N 140 ASN HD22 H N N 141 ASN HXT H N N 142 ASP N N N N 143 ASP CA C N S 144 ASP C C N N 145 ASP O O N N 146 ASP CB C N N 147 ASP CG C N N 148 ASP OD1 O N N 149 ASP OD2 O N N 150 ASP OXT O N N 151 ASP H H N N 152 ASP H2 H N N 153 ASP HA H N N 154 ASP HB2 H N N 155 ASP HB3 H N N 156 ASP HD2 H N N 157 ASP HXT H N N 158 C OP3 O N N 159 C P P N N 160 C OP1 O N N 161 C OP2 O N N 162 C "O5'" O N N 163 C "C5'" C N N 164 C "C4'" C N R 165 C "O4'" O N N 166 C "C3'" C N S 167 C "O3'" O N N 168 C "C2'" C N R 169 C "O2'" O N N 170 C "C1'" C N R 171 C N1 N N N 172 C C2 C N N 173 C O2 O N N 174 C N3 N N N 175 C C4 C N N 176 C N4 N N N 177 C C5 C N N 178 C C6 C N N 179 C HOP3 H N N 180 C HOP2 H N N 181 C "H5'" H N N 182 C "H5''" H N N 183 C "H4'" H N N 184 C "H3'" H N N 185 C "HO3'" H N N 186 C "H2'" H N N 187 C "HO2'" H N N 188 C "H1'" H N N 189 C H41 H N N 190 C H42 H N N 191 C H5 H N N 192 C H6 H N N 193 CYS N N N N 194 CYS CA C N R 195 CYS C C N N 196 CYS O O N N 197 CYS CB C N N 198 CYS SG S N N 199 CYS OXT O N N 200 CYS H H N N 201 CYS H2 H N N 202 CYS HA H N N 203 CYS HB2 H N N 204 CYS HB3 H N N 205 CYS HG H N N 206 CYS HXT H N N 207 G OP3 O N N 208 G P P N N 209 G OP1 O N N 210 G OP2 O N N 211 G "O5'" O N N 212 G "C5'" C N N 213 G "C4'" C N R 214 G "O4'" O N N 215 G "C3'" C N S 216 G "O3'" O N N 217 G "C2'" C N R 218 G "O2'" O N N 219 G "C1'" C N R 220 G N9 N Y N 221 G C8 C Y N 222 G N7 N Y N 223 G C5 C Y N 224 G C6 C N N 225 G O6 O N N 226 G N1 N N N 227 G C2 C N N 228 G N2 N N N 229 G N3 N N N 230 G C4 C Y N 231 G HOP3 H N N 232 G HOP2 H N N 233 G "H5'" H N N 234 G "H5''" H N N 235 G "H4'" H N N 236 G "H3'" H N N 237 G "HO3'" H N N 238 G "H2'" H N N 239 G "HO2'" H N N 240 G "H1'" H N N 241 G H8 H N N 242 G H1 H N N 243 G H21 H N N 244 G H22 H N N 245 GLN N N N N 246 GLN CA C N S 247 GLN C C N N 248 GLN O O N N 249 GLN CB C N N 250 GLN CG C N N 251 GLN CD C N N 252 GLN OE1 O N N 253 GLN NE2 N N N 254 GLN OXT O N N 255 GLN H H N N 256 GLN H2 H N N 257 GLN HA H N N 258 GLN HB2 H N N 259 GLN HB3 H N N 260 GLN HG2 H N N 261 GLN HG3 H N N 262 GLN HE21 H N N 263 GLN HE22 H N N 264 GLN HXT H N N 265 GLU N N N N 266 GLU CA C N S 267 GLU C C N N 268 GLU O O N N 269 GLU CB C N N 270 GLU CG C N N 271 GLU CD C N N 272 GLU OE1 O N N 273 GLU OE2 O N N 274 GLU OXT O N N 275 GLU H H N N 276 GLU H2 H N N 277 GLU HA H N N 278 GLU HB2 H N N 279 GLU HB3 H N N 280 GLU HG2 H N N 281 GLU HG3 H N N 282 GLU HE2 H N N 283 GLU HXT H N N 284 GLY N N N N 285 GLY CA C N N 286 GLY C C N N 287 GLY O O N N 288 GLY OXT O N N 289 GLY H H N N 290 GLY H2 H N N 291 GLY HA2 H N N 292 GLY HA3 H N N 293 GLY HXT H N N 294 HIS N N N N 295 HIS CA C N S 296 HIS C C N N 297 HIS O O N N 298 HIS CB C N N 299 HIS CG C Y N 300 HIS ND1 N Y N 301 HIS CD2 C Y N 302 HIS CE1 C Y N 303 HIS NE2 N Y N 304 HIS OXT O N N 305 HIS H H N N 306 HIS H2 H N N 307 HIS HA H N N 308 HIS HB2 H N N 309 HIS HB3 H N N 310 HIS HD1 H N N 311 HIS HD2 H N N 312 HIS HE1 H N N 313 HIS HE2 H N N 314 HIS HXT H N N 315 HOH O O N N 316 HOH H1 H N N 317 HOH H2 H N N 318 ILE N N N N 319 ILE CA C N S 320 ILE C C N N 321 ILE O O N N 322 ILE CB C N S 323 ILE CG1 C N N 324 ILE CG2 C N N 325 ILE CD1 C N N 326 ILE OXT O N N 327 ILE H H N N 328 ILE H2 H N N 329 ILE HA H N N 330 ILE HB H N N 331 ILE HG12 H N N 332 ILE HG13 H N N 333 ILE HG21 H N N 334 ILE HG22 H N N 335 ILE HG23 H N N 336 ILE HD11 H N N 337 ILE HD12 H N N 338 ILE HD13 H N N 339 ILE HXT H N N 340 LEU N N N N 341 LEU CA C N S 342 LEU C C N N 343 LEU O O N N 344 LEU CB C N N 345 LEU CG C N N 346 LEU CD1 C N N 347 LEU CD2 C N N 348 LEU OXT O N N 349 LEU H H N N 350 LEU H2 H N N 351 LEU HA H N N 352 LEU HB2 H N N 353 LEU HB3 H N N 354 LEU HG H N N 355 LEU HD11 H N N 356 LEU HD12 H N N 357 LEU HD13 H N N 358 LEU HD21 H N N 359 LEU HD22 H N N 360 LEU HD23 H N N 361 LEU HXT H N N 362 LYS N N N N 363 LYS CA C N S 364 LYS C C N N 365 LYS O O N N 366 LYS CB C N N 367 LYS CG C N N 368 LYS CD C N N 369 LYS CE C N N 370 LYS NZ N N N 371 LYS OXT O N N 372 LYS H H N N 373 LYS H2 H N N 374 LYS HA H N N 375 LYS HB2 H N N 376 LYS HB3 H N N 377 LYS HG2 H N N 378 LYS HG3 H N N 379 LYS HD2 H N N 380 LYS HD3 H N N 381 LYS HE2 H N N 382 LYS HE3 H N N 383 LYS HZ1 H N N 384 LYS HZ2 H N N 385 LYS HZ3 H N N 386 LYS HXT H N N 387 MET N N N N 388 MET CA C N S 389 MET C C N N 390 MET O O N N 391 MET CB C N N 392 MET CG C N N 393 MET SD S N N 394 MET CE C N N 395 MET OXT O N N 396 MET H H N N 397 MET H2 H N N 398 MET HA H N N 399 MET HB2 H N N 400 MET HB3 H N N 401 MET HG2 H N N 402 MET HG3 H N N 403 MET HE1 H N N 404 MET HE2 H N N 405 MET HE3 H N N 406 MET HXT H N N 407 MG MG MG N N 408 PHE N N N N 409 PHE CA C N S 410 PHE C C N N 411 PHE O O N N 412 PHE CB C N N 413 PHE CG C Y N 414 PHE CD1 C Y N 415 PHE CD2 C Y N 416 PHE CE1 C Y N 417 PHE CE2 C Y N 418 PHE CZ C Y N 419 PHE OXT O N N 420 PHE H H N N 421 PHE H2 H N N 422 PHE HA H N N 423 PHE HB2 H N N 424 PHE HB3 H N N 425 PHE HD1 H N N 426 PHE HD2 H N N 427 PHE HE1 H N N 428 PHE HE2 H N N 429 PHE HZ H N N 430 PHE HXT H N N 431 PRO N N N N 432 PRO CA C N S 433 PRO C C N N 434 PRO O O N N 435 PRO CB C N N 436 PRO CG C N N 437 PRO CD C N N 438 PRO OXT O N N 439 PRO H H N N 440 PRO HA H N N 441 PRO HB2 H N N 442 PRO HB3 H N N 443 PRO HG2 H N N 444 PRO HG3 H N N 445 PRO HD2 H N N 446 PRO HD3 H N N 447 PRO HXT H N N 448 SER N N N N 449 SER CA C N S 450 SER C C N N 451 SER O O N N 452 SER CB C N N 453 SER OG O N N 454 SER OXT O N N 455 SER H H N N 456 SER H2 H N N 457 SER HA H N N 458 SER HB2 H N N 459 SER HB3 H N N 460 SER HG H N N 461 SER HXT H N N 462 THR N N N N 463 THR CA C N S 464 THR C C N N 465 THR O O N N 466 THR CB C N R 467 THR OG1 O N N 468 THR CG2 C N N 469 THR OXT O N N 470 THR H H N N 471 THR H2 H N N 472 THR HA H N N 473 THR HB H N N 474 THR HG1 H N N 475 THR HG21 H N N 476 THR HG22 H N N 477 THR HG23 H N N 478 THR HXT H N N 479 TRP N N N N 480 TRP CA C N S 481 TRP C C N N 482 TRP O O N N 483 TRP CB C N N 484 TRP CG C Y N 485 TRP CD1 C Y N 486 TRP CD2 C Y N 487 TRP NE1 N Y N 488 TRP CE2 C Y N 489 TRP CE3 C Y N 490 TRP CZ2 C Y N 491 TRP CZ3 C Y N 492 TRP CH2 C Y N 493 TRP OXT O N N 494 TRP H H N N 495 TRP H2 H N N 496 TRP HA H N N 497 TRP HB2 H N N 498 TRP HB3 H N N 499 TRP HD1 H N N 500 TRP HE1 H N N 501 TRP HE3 H N N 502 TRP HZ2 H N N 503 TRP HZ3 H N N 504 TRP HH2 H N N 505 TRP HXT H N N 506 TYR N N N N 507 TYR CA C N S 508 TYR C C N N 509 TYR O O N N 510 TYR CB C N N 511 TYR CG C Y N 512 TYR CD1 C Y N 513 TYR CD2 C Y N 514 TYR CE1 C Y N 515 TYR CE2 C Y N 516 TYR CZ C Y N 517 TYR OH O N N 518 TYR OXT O N N 519 TYR H H N N 520 TYR H2 H N N 521 TYR HA H N N 522 TYR HB2 H N N 523 TYR HB3 H N N 524 TYR HD1 H N N 525 TYR HD2 H N N 526 TYR HE1 H N N 527 TYR HE2 H N N 528 TYR HH H N N 529 TYR HXT H N N 530 U OP3 O N N 531 U P P N N 532 U OP1 O N N 533 U OP2 O N N 534 U "O5'" O N N 535 U "C5'" C N N 536 U "C4'" C N R 537 U "O4'" O N N 538 U "C3'" C N S 539 U "O3'" O N N 540 U "C2'" C N R 541 U "O2'" O N N 542 U "C1'" C N R 543 U N1 N N N 544 U C2 C N N 545 U O2 O N N 546 U N3 N N N 547 U C4 C N N 548 U O4 O N N 549 U C5 C N N 550 U C6 C N N 551 U HOP3 H N N 552 U HOP2 H N N 553 U "H5'" H N N 554 U "H5''" H N N 555 U "H4'" H N N 556 U "H3'" H N N 557 U "HO3'" H N N 558 U "H2'" H N N 559 U "HO2'" H N N 560 U "H1'" H N N 561 U H3 H N N 562 U H5 H N N 563 U H6 H N N 564 VAL N N N N 565 VAL CA C N S 566 VAL C C N N 567 VAL O O N N 568 VAL CB C N N 569 VAL CG1 C N N 570 VAL CG2 C N N 571 VAL OXT O N N 572 VAL H H N N 573 VAL H2 H N N 574 VAL HA H N N 575 VAL HB H N N 576 VAL HG11 H N N 577 VAL HG12 H N N 578 VAL HG13 H N N 579 VAL HG21 H N N 580 VAL HG22 H N N 581 VAL HG23 H N N 582 VAL HXT H N N 583 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ANP PG O1G doub N N 52 ANP PG O2G sing N N 53 ANP PG O3G sing N N 54 ANP PG N3B sing N N 55 ANP O2G HOG2 sing N N 56 ANP O3G HOG3 sing N N 57 ANP PB O1B doub N N 58 ANP PB O2B sing N N 59 ANP PB N3B sing N N 60 ANP PB O3A sing N N 61 ANP O2B HOB2 sing N N 62 ANP N3B HNB1 sing N N 63 ANP PA O1A doub N N 64 ANP PA O2A sing N N 65 ANP PA O3A sing N N 66 ANP PA "O5'" sing N N 67 ANP O2A HOA2 sing N N 68 ANP "O5'" "C5'" sing N N 69 ANP "C5'" "C4'" sing N N 70 ANP "C5'" "H5'1" sing N N 71 ANP "C5'" "H5'2" sing N N 72 ANP "C4'" "O4'" sing N N 73 ANP "C4'" "C3'" sing N N 74 ANP "C4'" "H4'" sing N N 75 ANP "O4'" "C1'" sing N N 76 ANP "C3'" "O3'" sing N N 77 ANP "C3'" "C2'" sing N N 78 ANP "C3'" "H3'" sing N N 79 ANP "O3'" "HO3'" sing N N 80 ANP "C2'" "O2'" sing N N 81 ANP "C2'" "C1'" sing N N 82 ANP "C2'" "H2'" sing N N 83 ANP "O2'" "HO2'" sing N N 84 ANP "C1'" N9 sing N N 85 ANP "C1'" "H1'" sing N N 86 ANP N9 C8 sing Y N 87 ANP N9 C4 sing Y N 88 ANP C8 N7 doub Y N 89 ANP C8 H8 sing N N 90 ANP N7 C5 sing Y N 91 ANP C5 C6 sing Y N 92 ANP C5 C4 doub Y N 93 ANP C6 N6 sing N N 94 ANP C6 N1 doub Y N 95 ANP N6 HN61 sing N N 96 ANP N6 HN62 sing N N 97 ANP N1 C2 sing Y N 98 ANP C2 N3 doub Y N 99 ANP C2 H2 sing N N 100 ANP N3 C4 sing Y N 101 ARG N CA sing N N 102 ARG N H sing N N 103 ARG N H2 sing N N 104 ARG CA C sing N N 105 ARG CA CB sing N N 106 ARG CA HA sing N N 107 ARG C O doub N N 108 ARG C OXT sing N N 109 ARG CB CG sing N N 110 ARG CB HB2 sing N N 111 ARG CB HB3 sing N N 112 ARG CG CD sing N N 113 ARG CG HG2 sing N N 114 ARG CG HG3 sing N N 115 ARG CD NE sing N N 116 ARG CD HD2 sing N N 117 ARG CD HD3 sing N N 118 ARG NE CZ sing N N 119 ARG NE HE sing N N 120 ARG CZ NH1 sing N N 121 ARG CZ NH2 doub N N 122 ARG NH1 HH11 sing N N 123 ARG NH1 HH12 sing N N 124 ARG NH2 HH21 sing N N 125 ARG NH2 HH22 sing N N 126 ARG OXT HXT sing N N 127 ASN N CA sing N N 128 ASN N H sing N N 129 ASN N H2 sing N N 130 ASN CA C sing N N 131 ASN CA CB sing N N 132 ASN CA HA sing N N 133 ASN C O doub N N 134 ASN C OXT sing N N 135 ASN CB CG sing N N 136 ASN CB HB2 sing N N 137 ASN CB HB3 sing N N 138 ASN CG OD1 doub N N 139 ASN CG ND2 sing N N 140 ASN ND2 HD21 sing N N 141 ASN ND2 HD22 sing N N 142 ASN OXT HXT sing N N 143 ASP N CA sing N N 144 ASP N H sing N N 145 ASP N H2 sing N N 146 ASP CA C sing N N 147 ASP CA CB sing N N 148 ASP CA HA sing N N 149 ASP C O doub N N 150 ASP C OXT sing N N 151 ASP CB CG sing N N 152 ASP CB HB2 sing N N 153 ASP CB HB3 sing N N 154 ASP CG OD1 doub N N 155 ASP CG OD2 sing N N 156 ASP OD2 HD2 sing N N 157 ASP OXT HXT sing N N 158 C OP3 P sing N N 159 C OP3 HOP3 sing N N 160 C P OP1 doub N N 161 C P OP2 sing N N 162 C P "O5'" sing N N 163 C OP2 HOP2 sing N N 164 C "O5'" "C5'" sing N N 165 C "C5'" "C4'" sing N N 166 C "C5'" "H5'" sing N N 167 C "C5'" "H5''" sing N N 168 C "C4'" "O4'" sing N N 169 C "C4'" "C3'" sing N N 170 C "C4'" "H4'" sing N N 171 C "O4'" "C1'" sing N N 172 C "C3'" "O3'" sing N N 173 C "C3'" "C2'" sing N N 174 C "C3'" "H3'" sing N N 175 C "O3'" "HO3'" sing N N 176 C "C2'" "O2'" sing N N 177 C "C2'" "C1'" sing N N 178 C "C2'" "H2'" sing N N 179 C "O2'" "HO2'" sing N N 180 C "C1'" N1 sing N N 181 C "C1'" "H1'" sing N N 182 C N1 C2 sing N N 183 C N1 C6 sing N N 184 C C2 O2 doub N N 185 C C2 N3 sing N N 186 C N3 C4 doub N N 187 C C4 N4 sing N N 188 C C4 C5 sing N N 189 C N4 H41 sing N N 190 C N4 H42 sing N N 191 C C5 C6 doub N N 192 C C5 H5 sing N N 193 C C6 H6 sing N N 194 CYS N CA sing N N 195 CYS N H sing N N 196 CYS N H2 sing N N 197 CYS CA C sing N N 198 CYS CA CB sing N N 199 CYS CA HA sing N N 200 CYS C O doub N N 201 CYS C OXT sing N N 202 CYS CB SG sing N N 203 CYS CB HB2 sing N N 204 CYS CB HB3 sing N N 205 CYS SG HG sing N N 206 CYS OXT HXT sing N N 207 G OP3 P sing N N 208 G OP3 HOP3 sing N N 209 G P OP1 doub N N 210 G P OP2 sing N N 211 G P "O5'" sing N N 212 G OP2 HOP2 sing N N 213 G "O5'" "C5'" sing N N 214 G "C5'" "C4'" sing N N 215 G "C5'" "H5'" sing N N 216 G "C5'" "H5''" sing N N 217 G "C4'" "O4'" sing N N 218 G "C4'" "C3'" sing N N 219 G "C4'" "H4'" sing N N 220 G "O4'" "C1'" sing N N 221 G "C3'" "O3'" sing N N 222 G "C3'" "C2'" sing N N 223 G "C3'" "H3'" sing N N 224 G "O3'" "HO3'" sing N N 225 G "C2'" "O2'" sing N N 226 G "C2'" "C1'" sing N N 227 G "C2'" "H2'" sing N N 228 G "O2'" "HO2'" sing N N 229 G "C1'" N9 sing N N 230 G "C1'" "H1'" sing N N 231 G N9 C8 sing Y N 232 G N9 C4 sing Y N 233 G C8 N7 doub Y N 234 G C8 H8 sing N N 235 G N7 C5 sing Y N 236 G C5 C6 sing N N 237 G C5 C4 doub Y N 238 G C6 O6 doub N N 239 G C6 N1 sing N N 240 G N1 C2 sing N N 241 G N1 H1 sing N N 242 G C2 N2 sing N N 243 G C2 N3 doub N N 244 G N2 H21 sing N N 245 G N2 H22 sing N N 246 G N3 C4 sing N N 247 GLN N CA sing N N 248 GLN N H sing N N 249 GLN N H2 sing N N 250 GLN CA C sing N N 251 GLN CA CB sing N N 252 GLN CA HA sing N N 253 GLN C O doub N N 254 GLN C OXT sing N N 255 GLN CB CG sing N N 256 GLN CB HB2 sing N N 257 GLN CB HB3 sing N N 258 GLN CG CD sing N N 259 GLN CG HG2 sing N N 260 GLN CG HG3 sing N N 261 GLN CD OE1 doub N N 262 GLN CD NE2 sing N N 263 GLN NE2 HE21 sing N N 264 GLN NE2 HE22 sing N N 265 GLN OXT HXT sing N N 266 GLU N CA sing N N 267 GLU N H sing N N 268 GLU N H2 sing N N 269 GLU CA C sing N N 270 GLU CA CB sing N N 271 GLU CA HA sing N N 272 GLU C O doub N N 273 GLU C OXT sing N N 274 GLU CB CG sing N N 275 GLU CB HB2 sing N N 276 GLU CB HB3 sing N N 277 GLU CG CD sing N N 278 GLU CG HG2 sing N N 279 GLU CG HG3 sing N N 280 GLU CD OE1 doub N N 281 GLU CD OE2 sing N N 282 GLU OE2 HE2 sing N N 283 GLU OXT HXT sing N N 284 GLY N CA sing N N 285 GLY N H sing N N 286 GLY N H2 sing N N 287 GLY CA C sing N N 288 GLY CA HA2 sing N N 289 GLY CA HA3 sing N N 290 GLY C O doub N N 291 GLY C OXT sing N N 292 GLY OXT HXT sing N N 293 HIS N CA sing N N 294 HIS N H sing N N 295 HIS N H2 sing N N 296 HIS CA C sing N N 297 HIS CA CB sing N N 298 HIS CA HA sing N N 299 HIS C O doub N N 300 HIS C OXT sing N N 301 HIS CB CG sing N N 302 HIS CB HB2 sing N N 303 HIS CB HB3 sing N N 304 HIS CG ND1 sing Y N 305 HIS CG CD2 doub Y N 306 HIS ND1 CE1 doub Y N 307 HIS ND1 HD1 sing N N 308 HIS CD2 NE2 sing Y N 309 HIS CD2 HD2 sing N N 310 HIS CE1 NE2 sing Y N 311 HIS CE1 HE1 sing N N 312 HIS NE2 HE2 sing N N 313 HIS OXT HXT sing N N 314 HOH O H1 sing N N 315 HOH O H2 sing N N 316 ILE N CA sing N N 317 ILE N H sing N N 318 ILE N H2 sing N N 319 ILE CA C sing N N 320 ILE CA CB sing N N 321 ILE CA HA sing N N 322 ILE C O doub N N 323 ILE C OXT sing N N 324 ILE CB CG1 sing N N 325 ILE CB CG2 sing N N 326 ILE CB HB sing N N 327 ILE CG1 CD1 sing N N 328 ILE CG1 HG12 sing N N 329 ILE CG1 HG13 sing N N 330 ILE CG2 HG21 sing N N 331 ILE CG2 HG22 sing N N 332 ILE CG2 HG23 sing N N 333 ILE CD1 HD11 sing N N 334 ILE CD1 HD12 sing N N 335 ILE CD1 HD13 sing N N 336 ILE OXT HXT sing N N 337 LEU N CA sing N N 338 LEU N H sing N N 339 LEU N H2 sing N N 340 LEU CA C sing N N 341 LEU CA CB sing N N 342 LEU CA HA sing N N 343 LEU C O doub N N 344 LEU C OXT sing N N 345 LEU CB CG sing N N 346 LEU CB HB2 sing N N 347 LEU CB HB3 sing N N 348 LEU CG CD1 sing N N 349 LEU CG CD2 sing N N 350 LEU CG HG sing N N 351 LEU CD1 HD11 sing N N 352 LEU CD1 HD12 sing N N 353 LEU CD1 HD13 sing N N 354 LEU CD2 HD21 sing N N 355 LEU CD2 HD22 sing N N 356 LEU CD2 HD23 sing N N 357 LEU OXT HXT sing N N 358 LYS N CA sing N N 359 LYS N H sing N N 360 LYS N H2 sing N N 361 LYS CA C sing N N 362 LYS CA CB sing N N 363 LYS CA HA sing N N 364 LYS C O doub N N 365 LYS C OXT sing N N 366 LYS CB CG sing N N 367 LYS CB HB2 sing N N 368 LYS CB HB3 sing N N 369 LYS CG CD sing N N 370 LYS CG HG2 sing N N 371 LYS CG HG3 sing N N 372 LYS CD CE sing N N 373 LYS CD HD2 sing N N 374 LYS CD HD3 sing N N 375 LYS CE NZ sing N N 376 LYS CE HE2 sing N N 377 LYS CE HE3 sing N N 378 LYS NZ HZ1 sing N N 379 LYS NZ HZ2 sing N N 380 LYS NZ HZ3 sing N N 381 LYS OXT HXT sing N N 382 MET N CA sing N N 383 MET N H sing N N 384 MET N H2 sing N N 385 MET CA C sing N N 386 MET CA CB sing N N 387 MET CA HA sing N N 388 MET C O doub N N 389 MET C OXT sing N N 390 MET CB CG sing N N 391 MET CB HB2 sing N N 392 MET CB HB3 sing N N 393 MET CG SD sing N N 394 MET CG HG2 sing N N 395 MET CG HG3 sing N N 396 MET SD CE sing N N 397 MET CE HE1 sing N N 398 MET CE HE2 sing N N 399 MET CE HE3 sing N N 400 MET OXT HXT sing N N 401 PHE N CA sing N N 402 PHE N H sing N N 403 PHE N H2 sing N N 404 PHE CA C sing N N 405 PHE CA CB sing N N 406 PHE CA HA sing N N 407 PHE C O doub N N 408 PHE C OXT sing N N 409 PHE CB CG sing N N 410 PHE CB HB2 sing N N 411 PHE CB HB3 sing N N 412 PHE CG CD1 doub Y N 413 PHE CG CD2 sing Y N 414 PHE CD1 CE1 sing Y N 415 PHE CD1 HD1 sing N N 416 PHE CD2 CE2 doub Y N 417 PHE CD2 HD2 sing N N 418 PHE CE1 CZ doub Y N 419 PHE CE1 HE1 sing N N 420 PHE CE2 CZ sing Y N 421 PHE CE2 HE2 sing N N 422 PHE CZ HZ sing N N 423 PHE OXT HXT sing N N 424 PRO N CA sing N N 425 PRO N CD sing N N 426 PRO N H sing N N 427 PRO CA C sing N N 428 PRO CA CB sing N N 429 PRO CA HA sing N N 430 PRO C O doub N N 431 PRO C OXT sing N N 432 PRO CB CG sing N N 433 PRO CB HB2 sing N N 434 PRO CB HB3 sing N N 435 PRO CG CD sing N N 436 PRO CG HG2 sing N N 437 PRO CG HG3 sing N N 438 PRO CD HD2 sing N N 439 PRO CD HD3 sing N N 440 PRO OXT HXT sing N N 441 SER N CA sing N N 442 SER N H sing N N 443 SER N H2 sing N N 444 SER CA C sing N N 445 SER CA CB sing N N 446 SER CA HA sing N N 447 SER C O doub N N 448 SER C OXT sing N N 449 SER CB OG sing N N 450 SER CB HB2 sing N N 451 SER CB HB3 sing N N 452 SER OG HG sing N N 453 SER OXT HXT sing N N 454 THR N CA sing N N 455 THR N H sing N N 456 THR N H2 sing N N 457 THR CA C sing N N 458 THR CA CB sing N N 459 THR CA HA sing N N 460 THR C O doub N N 461 THR C OXT sing N N 462 THR CB OG1 sing N N 463 THR CB CG2 sing N N 464 THR CB HB sing N N 465 THR OG1 HG1 sing N N 466 THR CG2 HG21 sing N N 467 THR CG2 HG22 sing N N 468 THR CG2 HG23 sing N N 469 THR OXT HXT sing N N 470 TRP N CA sing N N 471 TRP N H sing N N 472 TRP N H2 sing N N 473 TRP CA C sing N N 474 TRP CA CB sing N N 475 TRP CA HA sing N N 476 TRP C O doub N N 477 TRP C OXT sing N N 478 TRP CB CG sing N N 479 TRP CB HB2 sing N N 480 TRP CB HB3 sing N N 481 TRP CG CD1 doub Y N 482 TRP CG CD2 sing Y N 483 TRP CD1 NE1 sing Y N 484 TRP CD1 HD1 sing N N 485 TRP CD2 CE2 doub Y N 486 TRP CD2 CE3 sing Y N 487 TRP NE1 CE2 sing Y N 488 TRP NE1 HE1 sing N N 489 TRP CE2 CZ2 sing Y N 490 TRP CE3 CZ3 doub Y N 491 TRP CE3 HE3 sing N N 492 TRP CZ2 CH2 doub Y N 493 TRP CZ2 HZ2 sing N N 494 TRP CZ3 CH2 sing Y N 495 TRP CZ3 HZ3 sing N N 496 TRP CH2 HH2 sing N N 497 TRP OXT HXT sing N N 498 TYR N CA sing N N 499 TYR N H sing N N 500 TYR N H2 sing N N 501 TYR CA C sing N N 502 TYR CA CB sing N N 503 TYR CA HA sing N N 504 TYR C O doub N N 505 TYR C OXT sing N N 506 TYR CB CG sing N N 507 TYR CB HB2 sing N N 508 TYR CB HB3 sing N N 509 TYR CG CD1 doub Y N 510 TYR CG CD2 sing Y N 511 TYR CD1 CE1 sing Y N 512 TYR CD1 HD1 sing N N 513 TYR CD2 CE2 doub Y N 514 TYR CD2 HD2 sing N N 515 TYR CE1 CZ doub Y N 516 TYR CE1 HE1 sing N N 517 TYR CE2 CZ sing Y N 518 TYR CE2 HE2 sing N N 519 TYR CZ OH sing N N 520 TYR OH HH sing N N 521 TYR OXT HXT sing N N 522 U OP3 P sing N N 523 U OP3 HOP3 sing N N 524 U P OP1 doub N N 525 U P OP2 sing N N 526 U P "O5'" sing N N 527 U OP2 HOP2 sing N N 528 U "O5'" "C5'" sing N N 529 U "C5'" "C4'" sing N N 530 U "C5'" "H5'" sing N N 531 U "C5'" "H5''" sing N N 532 U "C4'" "O4'" sing N N 533 U "C4'" "C3'" sing N N 534 U "C4'" "H4'" sing N N 535 U "O4'" "C1'" sing N N 536 U "C3'" "O3'" sing N N 537 U "C3'" "C2'" sing N N 538 U "C3'" "H3'" sing N N 539 U "O3'" "HO3'" sing N N 540 U "C2'" "O2'" sing N N 541 U "C2'" "C1'" sing N N 542 U "C2'" "H2'" sing N N 543 U "O2'" "HO2'" sing N N 544 U "C1'" N1 sing N N 545 U "C1'" "H1'" sing N N 546 U N1 C2 sing N N 547 U N1 C6 sing N N 548 U C2 O2 doub N N 549 U C2 N3 sing N N 550 U N3 C4 sing N N 551 U N3 H3 sing N N 552 U C4 O4 doub N N 553 U C4 C5 sing N N 554 U C5 C6 doub N N 555 U C5 H5 sing N N 556 U C6 H6 sing N N 557 VAL N CA sing N N 558 VAL N H sing N N 559 VAL N H2 sing N N 560 VAL CA C sing N N 561 VAL CA CB sing N N 562 VAL CA HA sing N N 563 VAL C O doub N N 564 VAL C OXT sing N N 565 VAL CB CG1 sing N N 566 VAL CB CG2 sing N N 567 VAL CB HB sing N N 568 VAL CG1 HG11 sing N N 569 VAL CG1 HG12 sing N N 570 VAL CG1 HG13 sing N N 571 VAL CG2 HG21 sing N N 572 VAL CG2 HG22 sing N N 573 VAL CG2 HG23 sing N N 574 VAL OXT HXT sing N N 575 # _em_admin.current_status REL _em_admin.deposition_date 2025-09-03 _em_admin.deposition_site RCSB _em_admin.entry_id 9Y4J _em_admin.last_update 2026-09-09 _em_admin.map_release_date 2026-09-09 _em_admin.title 'CryoEM Structure of human MDA5 with dsRNA (one protein subunit on dsRNA)' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units ? _em_entity_assembly_molwt.value ? # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 9606 _em_entity_assembly_naturalsource.organism 'Homo sapiens' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 562 _em_entity_assembly_recombinant.organism 'Escherichia coli' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 51.98 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version _em_software.reference_DOI 'PARTICLE SELECTION' ? 1 1 ? ? cryoSPARC ? ? 'IMAGE ACQUISITION' ? 2 1 1 1 ? ? ? MASKING ? 3 1 1 1 ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? ? 'LAYERLINE INDEXING' ? 5 1 1 1 ? ? ? 'DIFFRACTION INDEXING' ? 6 1 1 1 ? ? ? 'MODEL FITTING' ? 7 1 1 ? ? ? ? OTHER ? 8 1 1 1 ? ? ? 'INITIAL EULER ASSIGNMENT' ? 9 1 ? ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? ? CLASSIFICATION ? 11 1 ? ? ? ? ? RECONSTRUCTION ? 12 1 ? ? cryoSPARC ? ? 'MODEL REFINEMENT' ? 13 ? 1 ? PHENIX ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _ndb_struct_conf_na.entry_id 9Y4J _ndb_struct_conf_na.feature 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B C 1 1_555 C G 13 1_555 0.142 -0.150 0.096 -2.104 -7.613 -0.640 1 B_C1:G13_C B 1 ? C 13 ? 19 1 1 B G 2 1_555 C C 12 1_555 -0.207 -0.181 -0.261 -7.643 -12.332 1.924 2 B_G2:C12_C B 2 ? C 12 ? 19 1 1 B G 3 1_555 C C 11 1_555 -0.177 -0.166 -0.348 -6.516 -6.562 0.513 3 B_G3:C11_C B 3 ? C 11 ? 19 1 1 B U 4 1_555 C A 10 1_555 -0.077 -0.102 0.050 -1.094 -5.276 1.513 4 B_U4:A10_C B 4 ? C 10 ? 20 1 1 B U 5 1_555 C A 9 1_555 -0.003 -0.103 0.021 0.240 -4.733 2.433 5 B_U5:A9_C B 5 ? C 9 ? 20 1 1 B A 6 1_555 C U 8 1_555 0.044 -0.091 -0.041 -2.320 -3.809 3.470 6 B_A6:U8_C B 6 ? C 8 ? 20 1 1 B G 7 1_555 C C 7 1_555 -0.184 -0.118 -0.240 -4.812 -4.306 3.060 7 B_G7:C7_C B 7 ? C 7 ? 19 1 1 B G 8 1_555 C C 6 1_555 -0.180 -0.138 -0.114 -3.194 -3.873 2.010 8 B_G8:C6_C B 8 ? C 6 ? 19 1 1 B G 9 1_555 C C 5 1_555 -0.197 -0.138 -0.125 -0.561 -5.233 2.924 9 B_G9:C5_C B 9 ? C 5 ? 19 1 1 B G 10 1_555 C C 4 1_555 -0.129 -0.135 -0.282 -2.686 -7.493 3.333 10 B_G10:C4_C B 10 ? C 4 ? 19 1 1 B C 11 1_555 C G 3 1_555 0.190 -0.126 -0.056 -1.535 -5.065 1.836 11 B_C11:G3_C B 11 ? C 3 ? 19 1 1 B U 12 1_555 C A 2 1_555 -0.104 -0.113 0.186 -2.059 -5.415 1.447 12 B_U12:A2_C B 12 ? C 2 ? 20 1 1 B A 13 1_555 C U 1 1_555 0.047 -0.137 -0.121 -3.072 -6.278 2.429 13 B_A13:U1_C B 13 ? C 1 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B C 1 1_555 C G 13 1_555 B G 2 1_555 C C 12 1_555 -0.212 -1.161 3.323 0.019 13.868 29.346 -4.384 0.382 2.531 25.647 -0.035 32.393 1 BB_C1G2:C12G13_CC B 1 ? C 13 ? B 2 ? C 12 ? 1 B G 2 1_555 C C 12 1_555 B G 3 1_555 C C 11 1_555 -0.363 -1.113 3.269 -2.478 4.509 32.436 -2.727 0.225 3.109 8.009 4.402 32.831 2 BB_G2G3:C11C12_CC B 2 ? C 12 ? B 3 ? C 11 ? 1 B G 3 1_555 C C 11 1_555 B U 4 1_555 C A 10 1_555 0.096 -1.352 3.150 -3.858 5.382 32.270 -3.237 -0.780 2.863 9.557 6.850 32.924 3 BB_G3U4:A10C11_CC B 3 ? C 11 ? B 4 ? C 10 ? 1 B U 4 1_555 C A 10 1_555 B U 5 1_555 C A 9 1_555 0.455 -1.648 3.146 1.417 5.895 30.355 -4.135 -0.601 2.801 11.119 -2.673 30.940 4 BB_U4U5:A9A10_CC B 4 ? C 10 ? B 5 ? C 9 ? 1 B U 5 1_555 C A 9 1_555 B A 6 1_555 C U 8 1_555 0.247 -1.473 3.278 1.019 9.028 30.074 -4.319 -0.276 2.738 16.919 -1.910 31.386 5 BB_U5A6:U8A9_CC B 5 ? C 9 ? B 6 ? C 8 ? 1 B A 6 1_555 C U 8 1_555 B G 7 1_555 C C 7 1_555 0.045 -1.996 3.411 0.928 2.546 26.800 -4.947 0.144 3.211 5.476 -1.996 26.934 6 BB_A6G7:C7U8_CC B 6 ? C 8 ? B 7 ? C 7 ? 1 B G 7 1_555 C C 7 1_555 B G 8 1_555 C C 6 1_555 -0.317 -1.568 3.297 -1.530 4.015 28.565 -4.016 0.303 3.064 8.079 3.079 28.879 7 BB_G7G8:C6C7_CC B 7 ? C 7 ? B 8 ? C 6 ? 1 B G 8 1_555 C C 6 1_555 B G 9 1_555 C C 5 1_555 -0.132 -1.294 3.258 -1.070 4.045 31.647 -3.068 0.051 3.075 7.377 1.951 31.915 8 BB_G8G9:C5C6_CC B 8 ? C 6 ? B 9 ? C 5 ? 1 B G 9 1_555 C C 5 1_555 B G 10 1_555 C C 4 1_555 -0.055 -1.614 3.351 -0.532 5.436 31.340 -3.924 0.005 3.035 9.968 0.976 31.801 9 BB_G9G10:C4C5_CC B 9 ? C 5 ? B 10 ? C 4 ? 1 B G 10 1_555 C C 4 1_555 B C 11 1_555 C G 3 1_555 -0.279 -1.961 3.312 -1.593 2.334 30.333 -4.195 0.216 3.166 4.448 3.037 30.461 10 BB_G10C11:G3C4_CC B 10 ? C 4 ? B 11 ? C 3 ? 1 B C 11 1_555 C G 3 1_555 B U 12 1_555 C A 2 1_555 -0.169 -1.621 3.276 -1.246 3.183 32.007 -3.481 0.087 3.109 5.753 2.252 32.185 11 BB_C11U12:A2G3_CC B 11 ? C 3 ? B 12 ? C 2 ? 1 B U 12 1_555 C A 2 1_555 B A 13 1_555 C U 1 1_555 0.466 -1.820 3.266 4.705 7.814 29.295 -4.891 -0.010 2.741 14.999 -9.030 30.652 12 BB_U12A13:U1A2_CC B 12 ? C 2 ? B 13 ? C 1 ? # _pdbx_audit_support.funding_organization 'Howard Hughes Medical Institute (HHMI)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 9Y4J _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C MG N O P S # loop_ # loop_ #