data_9YA9 # _entry.id 9YA9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.410 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9YA9 pdb_00009ya9 10.2210/pdb9ya9/pdb WWPDB D_1000300132 ? ? EMDB EMD-72725 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2026-02-18 ? 2 'EM metadata' 1 0 2026-02-18 ? 3 'Additional map' 1 0 2026-02-18 1 4 FSC 1 0 2026-02-18 ? 5 'Half map' 1 0 2026-02-18 1 6 'Half map' 1 0 2026-02-18 2 7 Image 1 0 2026-02-18 ? 8 Mask 1 0 2026-02-18 1 9 'Primary map' 1 0 2026-02-18 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? 3 3 'Additional map' repository 'Initial release' ? ? 4 4 FSC repository 'Initial release' ? ? 5 5 'Half map' repository 'Initial release' ? ? 6 6 'Half map' repository 'Initial release' ? ? 7 7 Image repository 'Initial release' ? ? 8 8 Mask repository 'Initial release' ? ? 9 9 'Primary map' repository 'Initial release' ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9YA9 _pdbx_database_status.recvd_initial_deposition_date 2025-09-15 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible N # _pdbx_database_related.db_name EMDB _pdbx_database_related.details ;Cryo-EM structure of ternary complex BCL6-CRBN-DDB1 with BMS-986458 (local refined), a potent and selective BCL6 ligand directed degrader (LDD) ; _pdbx_database_related.db_id EMD-72725 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email jinyi.zhu@bms.com _pdbx_contact_author.name_first Jinyi _pdbx_contact_author.name_last Zhu _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-5436-4262 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Zhu, J.' 1 0000-0001-5436-4262 'Fang, W.' 2 ? 'Pagarigan, B.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Med.Chem. _citation.journal_id_ASTM JMCMAR _citation.journal_id_CSD 0151 _citation.journal_id_ISSN 0022-2623 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title ;Discovery of BMS-986458, a Potent and Selective B-Cell Lymphoma 6 Protein Ligand-Directed Degrader, for the Treatment of B-Cell Non-Hodgkin Lymphoma. ; _citation.year 2026 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acs.jmedchem.5c03123 _citation.pdbx_database_id_PubMed 41670385 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Mortensen, D.S.' 1 0000-0002-9144-0962 primary 'Shunatona, H.P.' 2 0000-0002-2027-2834 primary 'Holmberg-Douglas, N.' 3 0009-0007-5629-4756 primary 'Rhodes, J.' 4 ? primary 'Da Silva, D.' 5 ? primary 'Gamez, J.' 6 ? primary 'Groza, M.' 7 ? primary 'Zhu, J.' 8 0000-0001-5436-4262 primary 'Christoforou, A.' 9 ? primary 'Johnson, S.A.' 10 ? primary 'Khambatta, G.' 11 0009-0008-9095-1892 primary 'Narla, R.K.' 12 ? primary 'Nimje, R.Y.' 13 0000-0002-9438-5540 primary 'Huang, D.' 14 ? primary 'Dodd, D.S.' 15 ? primary 'Griffin, J.' 16 ? primary 'Miseo, G.' 17 ? primary 'Whitefield, B.' 18 ? primary 'Weiss, D.R.' 19 ? primary 'Rader, J.' 20 ? primary 'Kuzu, E.' 21 ? primary 'Leisten, J.' 22 ? primary 'Lai, C.' 23 ? primary 'Shi, L.' 24 0009-0002-1216-8014 primary 'Del Rosario, J.' 25 ? primary 'Dalvie, D.' 26 ? primary 'Rolfe, M.' 27 ? primary 'Zapf, C.W.' 28 ? primary 'Belmont, P.' 29 ? primary 'Alexander, M.' 30 0000-0002-8990-9397 primary 'Bence, N.' 31 ? primary 'Groocock, L.' 32 0000-0002-4906-932X # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'B-cell lymphoma 6 protein' 16431.863 2 ? ? ? ? 2 polymer man 'Protein cereblon' 53581.984 1 ? ? ? ? 3 non-polymer syn ;(3R)-3-(6-{[(3R,4R)-1-{5-chloro-4-[(1-methyl-2-oxo-2,3-dihydro-1H-indol-5-yl)amino]pyrimidin-2-yl}-3-methylpiperidin-4-yl]amino}-1-methyl-1H-indazol-3-yl)piperidine-2,6-dione ; 628.124 1 ? ? ? ? 4 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'BCL-6,B-cell lymphoma 5 protein,BCL-5,Protein LAZ-3,Zinc finger and BTB domain-containing protein 27,Zinc finger protein 51' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSLDYKDDDDKENLYFQGADSCIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLK CNLSVINLDPEINPEGFCILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKASE ; ;GSLDYKDDDDKENLYFQGADSCIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLK CNLSVINLDPEINPEGFCILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKASE ; A,B ? 2 'polypeptide(L)' no no ;MSYYHHHHHHDYDIPTTGLVPRGSMMAGEGDQQDAAHNMGNHLPLLPAESEEEDEMEVEDQDSKEAKKPNIINFDTSLPT SHTYLGADMEEFHGRTLHDDDSCQVIPVLPQVMMILIPGQTLPLQLFHPQEVSMVRNLIQKDRTFAVLAYSNVQEREAQF GTTAEIYAYREEQDFGIEIVKVKAIGRQRFKVLELRTQSDGIQQAKVQILPECVLPSTMSAVQLESLNKCQIFPSKPVSR EDQCSYKWWQKYQKRKFHCANLTSWPRWLYSLYDAETLMDRIKKQLREWDENLKDDSLPSNPIDFSYRVAACLPIDDVLR IQLLKIGSAIQRLRCELDIMNKCTSLCCKQCQETEITTKNEIFSLSLCGPMAAYVNPHGYVHETLTVYKACNLNLIGRPS TEHSWFPGYAWTVAQCKICASHIGWKFTATKKDMSPQKFWGLTRSALLPTIPDTEDEISPDKVILCL ; ;MSYYHHHHHHDYDIPTTGLVPRGSMMAGEGDQQDAAHNMGNHLPLLPAESEEEDEMEVEDQDSKEAKKPNIINFDTSLPT SHTYLGADMEEFHGRTLHDDDSCQVIPVLPQVMMILIPGQTLPLQLFHPQEVSMVRNLIQKDRTFAVLAYSNVQEREAQF GTTAEIYAYREEQDFGIEIVKVKAIGRQRFKVLELRTQSDGIQQAKVQILPECVLPSTMSAVQLESLNKCQIFPSKPVSR EDQCSYKWWQKYQKRKFHCANLTSWPRWLYSLYDAETLMDRIKKQLREWDENLKDDSLPSNPIDFSYRVAACLPIDDVLR IQLLKIGSAIQRLRCELDIMNKCTSLCCKQCQETEITTKNEIFSLSLCGPMAAYVNPHGYVHETLTVYKACNLNLIGRPS TEHSWFPGYAWTVAQCKICASHIGWKFTATKKDMSPQKFWGLTRSALLPTIPDTEDEISPDKVILCL ; C ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 ;(3R)-3-(6-{[(3R,4R)-1-{5-chloro-4-[(1-methyl-2-oxo-2,3-dihydro-1H-indol-5-yl)amino]pyrimidin-2-yl}-3-methylpiperidin-4-yl]amino}-1-methyl-1H-indazol-3-yl)piperidine-2,6-dione ; A1CTU 4 'ZINC ION' ZN # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 LEU n 1 4 ASP n 1 5 TYR n 1 6 LYS n 1 7 ASP n 1 8 ASP n 1 9 ASP n 1 10 ASP n 1 11 LYS n 1 12 GLU n 1 13 ASN n 1 14 LEU n 1 15 TYR n 1 16 PHE n 1 17 GLN n 1 18 GLY n 1 19 ALA n 1 20 ASP n 1 21 SER n 1 22 CYS n 1 23 ILE n 1 24 GLN n 1 25 PHE n 1 26 THR n 1 27 ARG n 1 28 HIS n 1 29 ALA n 1 30 SER n 1 31 ASP n 1 32 VAL n 1 33 LEU n 1 34 LEU n 1 35 ASN n 1 36 LEU n 1 37 ASN n 1 38 ARG n 1 39 LEU n 1 40 ARG n 1 41 SER n 1 42 ARG n 1 43 ASP n 1 44 ILE n 1 45 LEU n 1 46 THR n 1 47 ASP n 1 48 VAL n 1 49 VAL n 1 50 ILE n 1 51 VAL n 1 52 VAL n 1 53 SER n 1 54 ARG n 1 55 GLU n 1 56 GLN n 1 57 PHE n 1 58 ARG n 1 59 ALA n 1 60 HIS n 1 61 LYS n 1 62 THR n 1 63 VAL n 1 64 LEU n 1 65 MET n 1 66 ALA n 1 67 CYS n 1 68 SER n 1 69 GLY n 1 70 LEU n 1 71 PHE n 1 72 TYR n 1 73 SER n 1 74 ILE n 1 75 PHE n 1 76 THR n 1 77 ASP n 1 78 GLN n 1 79 LEU n 1 80 LYS n 1 81 CYS n 1 82 ASN n 1 83 LEU n 1 84 SER n 1 85 VAL n 1 86 ILE n 1 87 ASN n 1 88 LEU n 1 89 ASP n 1 90 PRO n 1 91 GLU n 1 92 ILE n 1 93 ASN n 1 94 PRO n 1 95 GLU n 1 96 GLY n 1 97 PHE n 1 98 CYS n 1 99 ILE n 1 100 LEU n 1 101 LEU n 1 102 ASP n 1 103 PHE n 1 104 MET n 1 105 TYR n 1 106 THR n 1 107 SER n 1 108 ARG n 1 109 LEU n 1 110 ASN n 1 111 LEU n 1 112 ARG n 1 113 GLU n 1 114 GLY n 1 115 ASN n 1 116 ILE n 1 117 MET n 1 118 ALA n 1 119 VAL n 1 120 MET n 1 121 ALA n 1 122 THR n 1 123 ALA n 1 124 MET n 1 125 TYR n 1 126 LEU n 1 127 GLN n 1 128 MET n 1 129 GLU n 1 130 HIS n 1 131 VAL n 1 132 VAL n 1 133 ASP n 1 134 THR n 1 135 CYS n 1 136 ARG n 1 137 LYS n 1 138 PHE n 1 139 ILE n 1 140 LYS n 1 141 ALA n 1 142 SER n 1 143 GLU n 2 1 MET n 2 2 SER n 2 3 TYR n 2 4 TYR n 2 5 HIS n 2 6 HIS n 2 7 HIS n 2 8 HIS n 2 9 HIS n 2 10 HIS n 2 11 ASP n 2 12 TYR n 2 13 ASP n 2 14 ILE n 2 15 PRO n 2 16 THR n 2 17 THR n 2 18 GLY n 2 19 LEU n 2 20 VAL n 2 21 PRO n 2 22 ARG n 2 23 GLY n 2 24 SER n 2 25 MET n 2 26 MET n 2 27 ALA n 2 28 GLY n 2 29 GLU n 2 30 GLY n 2 31 ASP n 2 32 GLN n 2 33 GLN n 2 34 ASP n 2 35 ALA n 2 36 ALA n 2 37 HIS n 2 38 ASN n 2 39 MET n 2 40 GLY n 2 41 ASN n 2 42 HIS n 2 43 LEU n 2 44 PRO n 2 45 LEU n 2 46 LEU n 2 47 PRO n 2 48 ALA n 2 49 GLU n 2 50 SER n 2 51 GLU n 2 52 GLU n 2 53 GLU n 2 54 ASP n 2 55 GLU n 2 56 MET n 2 57 GLU n 2 58 VAL n 2 59 GLU n 2 60 ASP n 2 61 GLN n 2 62 ASP n 2 63 SER n 2 64 LYS n 2 65 GLU n 2 66 ALA n 2 67 LYS n 2 68 LYS n 2 69 PRO n 2 70 ASN n 2 71 ILE n 2 72 ILE n 2 73 ASN n 2 74 PHE n 2 75 ASP n 2 76 THR n 2 77 SER n 2 78 LEU n 2 79 PRO n 2 80 THR n 2 81 SER n 2 82 HIS n 2 83 THR n 2 84 TYR n 2 85 LEU n 2 86 GLY n 2 87 ALA n 2 88 ASP n 2 89 MET n 2 90 GLU n 2 91 GLU n 2 92 PHE n 2 93 HIS n 2 94 GLY n 2 95 ARG n 2 96 THR n 2 97 LEU n 2 98 HIS n 2 99 ASP n 2 100 ASP n 2 101 ASP n 2 102 SER n 2 103 CYS n 2 104 GLN n 2 105 VAL n 2 106 ILE n 2 107 PRO n 2 108 VAL n 2 109 LEU n 2 110 PRO n 2 111 GLN n 2 112 VAL n 2 113 MET n 2 114 MET n 2 115 ILE n 2 116 LEU n 2 117 ILE n 2 118 PRO n 2 119 GLY n 2 120 GLN n 2 121 THR n 2 122 LEU n 2 123 PRO n 2 124 LEU n 2 125 GLN n 2 126 LEU n 2 127 PHE n 2 128 HIS n 2 129 PRO n 2 130 GLN n 2 131 GLU n 2 132 VAL n 2 133 SER n 2 134 MET n 2 135 VAL n 2 136 ARG n 2 137 ASN n 2 138 LEU n 2 139 ILE n 2 140 GLN n 2 141 LYS n 2 142 ASP n 2 143 ARG n 2 144 THR n 2 145 PHE n 2 146 ALA n 2 147 VAL n 2 148 LEU n 2 149 ALA n 2 150 TYR n 2 151 SER n 2 152 ASN n 2 153 VAL n 2 154 GLN n 2 155 GLU n 2 156 ARG n 2 157 GLU n 2 158 ALA n 2 159 GLN n 2 160 PHE n 2 161 GLY n 2 162 THR n 2 163 THR n 2 164 ALA n 2 165 GLU n 2 166 ILE n 2 167 TYR n 2 168 ALA n 2 169 TYR n 2 170 ARG n 2 171 GLU n 2 172 GLU n 2 173 GLN n 2 174 ASP n 2 175 PHE n 2 176 GLY n 2 177 ILE n 2 178 GLU n 2 179 ILE n 2 180 VAL n 2 181 LYS n 2 182 VAL n 2 183 LYS n 2 184 ALA n 2 185 ILE n 2 186 GLY n 2 187 ARG n 2 188 GLN n 2 189 ARG n 2 190 PHE n 2 191 LYS n 2 192 VAL n 2 193 LEU n 2 194 GLU n 2 195 LEU n 2 196 ARG n 2 197 THR n 2 198 GLN n 2 199 SER n 2 200 ASP n 2 201 GLY n 2 202 ILE n 2 203 GLN n 2 204 GLN n 2 205 ALA n 2 206 LYS n 2 207 VAL n 2 208 GLN n 2 209 ILE n 2 210 LEU n 2 211 PRO n 2 212 GLU n 2 213 CYS n 2 214 VAL n 2 215 LEU n 2 216 PRO n 2 217 SER n 2 218 THR n 2 219 MET n 2 220 SER n 2 221 ALA n 2 222 VAL n 2 223 GLN n 2 224 LEU n 2 225 GLU n 2 226 SER n 2 227 LEU n 2 228 ASN n 2 229 LYS n 2 230 CYS n 2 231 GLN n 2 232 ILE n 2 233 PHE n 2 234 PRO n 2 235 SER n 2 236 LYS n 2 237 PRO n 2 238 VAL n 2 239 SER n 2 240 ARG n 2 241 GLU n 2 242 ASP n 2 243 GLN n 2 244 CYS n 2 245 SER n 2 246 TYR n 2 247 LYS n 2 248 TRP n 2 249 TRP n 2 250 GLN n 2 251 LYS n 2 252 TYR n 2 253 GLN n 2 254 LYS n 2 255 ARG n 2 256 LYS n 2 257 PHE n 2 258 HIS n 2 259 CYS n 2 260 ALA n 2 261 ASN n 2 262 LEU n 2 263 THR n 2 264 SER n 2 265 TRP n 2 266 PRO n 2 267 ARG n 2 268 TRP n 2 269 LEU n 2 270 TYR n 2 271 SER n 2 272 LEU n 2 273 TYR n 2 274 ASP n 2 275 ALA n 2 276 GLU n 2 277 THR n 2 278 LEU n 2 279 MET n 2 280 ASP n 2 281 ARG n 2 282 ILE n 2 283 LYS n 2 284 LYS n 2 285 GLN n 2 286 LEU n 2 287 ARG n 2 288 GLU n 2 289 TRP n 2 290 ASP n 2 291 GLU n 2 292 ASN n 2 293 LEU n 2 294 LYS n 2 295 ASP n 2 296 ASP n 2 297 SER n 2 298 LEU n 2 299 PRO n 2 300 SER n 2 301 ASN n 2 302 PRO n 2 303 ILE n 2 304 ASP n 2 305 PHE n 2 306 SER n 2 307 TYR n 2 308 ARG n 2 309 VAL n 2 310 ALA n 2 311 ALA n 2 312 CYS n 2 313 LEU n 2 314 PRO n 2 315 ILE n 2 316 ASP n 2 317 ASP n 2 318 VAL n 2 319 LEU n 2 320 ARG n 2 321 ILE n 2 322 GLN n 2 323 LEU n 2 324 LEU n 2 325 LYS n 2 326 ILE n 2 327 GLY n 2 328 SER n 2 329 ALA n 2 330 ILE n 2 331 GLN n 2 332 ARG n 2 333 LEU n 2 334 ARG n 2 335 CYS n 2 336 GLU n 2 337 LEU n 2 338 ASP n 2 339 ILE n 2 340 MET n 2 341 ASN n 2 342 LYS n 2 343 CYS n 2 344 THR n 2 345 SER n 2 346 LEU n 2 347 CYS n 2 348 CYS n 2 349 LYS n 2 350 GLN n 2 351 CYS n 2 352 GLN n 2 353 GLU n 2 354 THR n 2 355 GLU n 2 356 ILE n 2 357 THR n 2 358 THR n 2 359 LYS n 2 360 ASN n 2 361 GLU n 2 362 ILE n 2 363 PHE n 2 364 SER n 2 365 LEU n 2 366 SER n 2 367 LEU n 2 368 CYS n 2 369 GLY n 2 370 PRO n 2 371 MET n 2 372 ALA n 2 373 ALA n 2 374 TYR n 2 375 VAL n 2 376 ASN n 2 377 PRO n 2 378 HIS n 2 379 GLY n 2 380 TYR n 2 381 VAL n 2 382 HIS n 2 383 GLU n 2 384 THR n 2 385 LEU n 2 386 THR n 2 387 VAL n 2 388 TYR n 2 389 LYS n 2 390 ALA n 2 391 CYS n 2 392 ASN n 2 393 LEU n 2 394 ASN n 2 395 LEU n 2 396 ILE n 2 397 GLY n 2 398 ARG n 2 399 PRO n 2 400 SER n 2 401 THR n 2 402 GLU n 2 403 HIS n 2 404 SER n 2 405 TRP n 2 406 PHE n 2 407 PRO n 2 408 GLY n 2 409 TYR n 2 410 ALA n 2 411 TRP n 2 412 THR n 2 413 VAL n 2 414 ALA n 2 415 GLN n 2 416 CYS n 2 417 LYS n 2 418 ILE n 2 419 CYS n 2 420 ALA n 2 421 SER n 2 422 HIS n 2 423 ILE n 2 424 GLY n 2 425 TRP n 2 426 LYS n 2 427 PHE n 2 428 THR n 2 429 ALA n 2 430 THR n 2 431 LYS n 2 432 LYS n 2 433 ASP n 2 434 MET n 2 435 SER n 2 436 PRO n 2 437 GLN n 2 438 LYS n 2 439 PHE n 2 440 TRP n 2 441 GLY n 2 442 LEU n 2 443 THR n 2 444 ARG n 2 445 SER n 2 446 ALA n 2 447 LEU n 2 448 LEU n 2 449 PRO n 2 450 THR n 2 451 ILE n 2 452 PRO n 2 453 ASP n 2 454 THR n 2 455 GLU n 2 456 ASP n 2 457 GLU n 2 458 ILE n 2 459 SER n 2 460 PRO n 2 461 ASP n 2 462 LYS n 2 463 VAL n 2 464 ILE n 2 465 LEU n 2 466 CYS n 2 467 LEU n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 143 human ? 'BCL6, BCL5, LAZ3, ZBTB27, ZNF51' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? 'BL21 DE3' ? ? plasmid ? ? ? pMAL-c5x ? ? 2 1 sample 'Biological sequence' 1 467 human ? 'CRBN, AD-006' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? 'fall armyworm' 'Spodoptera frugiperda' 7108 ? ? ? ? ? ? ? ? ? ? ? sf9 ? ? baculovirus ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A1CTU non-polymer . ;(3R)-3-(6-{[(3R,4R)-1-{5-chloro-4-[(1-methyl-2-oxo-2,3-dihydro-1H-indol-5-yl)amino]pyrimidin-2-yl}-3-methylpiperidin-4-yl]amino}-1-methyl-1H-indazol-3-yl)piperidine-2,6-dione ; ? 'C32 H34 Cl N9 O3' 628.124 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -13 ? ? ? A . n A 1 2 SER 2 -12 ? ? ? A . n A 1 3 LEU 3 -11 ? ? ? A . n A 1 4 ASP 4 -10 ? ? ? A . n A 1 5 TYR 5 -9 ? ? ? A . n A 1 6 LYS 6 -8 ? ? ? A . n A 1 7 ASP 7 -7 ? ? ? A . n A 1 8 ASP 8 -6 ? ? ? A . n A 1 9 ASP 9 -5 ? ? ? A . n A 1 10 ASP 10 -4 ? ? ? A . n A 1 11 LYS 11 -3 ? ? ? A . n A 1 12 GLU 12 -2 ? ? ? A . n A 1 13 ASN 13 -1 ? ? ? A . n A 1 14 LEU 14 0 ? ? ? A . n A 1 15 TYR 15 1 ? ? ? A . n A 1 16 PHE 16 2 ? ? ? A . n A 1 17 GLN 17 3 ? ? ? A . n A 1 18 GLY 18 4 ? ? ? A . n A 1 19 ALA 19 5 ? ? ? A . n A 1 20 ASP 20 6 ? ? ? A . n A 1 21 SER 21 7 ? ? ? A . n A 1 22 CYS 22 8 8 CYS CYS A . n A 1 23 ILE 23 9 9 ILE ILE A . n A 1 24 GLN 24 10 10 GLN GLN A . n A 1 25 PHE 25 11 11 PHE PHE A . n A 1 26 THR 26 12 12 THR THR A . n A 1 27 ARG 27 13 13 ARG ARG A . n A 1 28 HIS 28 14 14 HIS HIS A . n A 1 29 ALA 29 15 15 ALA ALA A . n A 1 30 SER 30 16 16 SER SER A . n A 1 31 ASP 31 17 17 ASP ASP A . n A 1 32 VAL 32 18 18 VAL VAL A . n A 1 33 LEU 33 19 19 LEU LEU A . n A 1 34 LEU 34 20 20 LEU LEU A . n A 1 35 ASN 35 21 21 ASN ASN A . n A 1 36 LEU 36 22 22 LEU LEU A . n A 1 37 ASN 37 23 23 ASN ASN A . n A 1 38 ARG 38 24 24 ARG ARG A . n A 1 39 LEU 39 25 25 LEU LEU A . n A 1 40 ARG 40 26 26 ARG ARG A . n A 1 41 SER 41 27 27 SER SER A . n A 1 42 ARG 42 28 28 ARG ARG A . n A 1 43 ASP 43 29 29 ASP ASP A . n A 1 44 ILE 44 30 30 ILE ILE A . n A 1 45 LEU 45 31 31 LEU LEU A . n A 1 46 THR 46 32 32 THR THR A . n A 1 47 ASP 47 33 33 ASP ASP A . n A 1 48 VAL 48 34 34 VAL VAL A . n A 1 49 VAL 49 35 35 VAL VAL A . n A 1 50 ILE 50 36 36 ILE ILE A . n A 1 51 VAL 51 37 37 VAL VAL A . n A 1 52 VAL 52 38 38 VAL VAL A . n A 1 53 SER 53 39 39 SER SER A . n A 1 54 ARG 54 40 40 ARG ARG A . n A 1 55 GLU 55 41 41 GLU GLU A . n A 1 56 GLN 56 42 42 GLN GLN A . n A 1 57 PHE 57 43 43 PHE PHE A . n A 1 58 ARG 58 44 44 ARG ARG A . n A 1 59 ALA 59 45 45 ALA ALA A . n A 1 60 HIS 60 46 46 HIS HIS A . n A 1 61 LYS 61 47 47 LYS LYS A . n A 1 62 THR 62 48 48 THR THR A . n A 1 63 VAL 63 49 49 VAL VAL A . n A 1 64 LEU 64 50 50 LEU LEU A . n A 1 65 MET 65 51 51 MET MET A . n A 1 66 ALA 66 52 52 ALA ALA A . n A 1 67 CYS 67 53 53 CYS CYS A . n A 1 68 SER 68 54 54 SER SER A . n A 1 69 GLY 69 55 55 GLY GLY A . n A 1 70 LEU 70 56 56 LEU LEU A . n A 1 71 PHE 71 57 57 PHE PHE A . n A 1 72 TYR 72 58 58 TYR TYR A . n A 1 73 SER 73 59 59 SER SER A . n A 1 74 ILE 74 60 60 ILE ILE A . n A 1 75 PHE 75 61 61 PHE PHE A . n A 1 76 THR 76 62 62 THR THR A . n A 1 77 ASP 77 63 63 ASP ASP A . n A 1 78 GLN 78 64 64 GLN GLN A . n A 1 79 LEU 79 65 65 LEU LEU A . n A 1 80 LYS 80 66 66 LYS LYS A . n A 1 81 CYS 81 67 67 CYS CYS A . n A 1 82 ASN 82 68 68 ASN ASN A . n A 1 83 LEU 83 69 69 LEU LEU A . n A 1 84 SER 84 70 70 SER SER A . n A 1 85 VAL 85 71 71 VAL VAL A . n A 1 86 ILE 86 72 72 ILE ILE A . n A 1 87 ASN 87 73 73 ASN ASN A . n A 1 88 LEU 88 74 74 LEU LEU A . n A 1 89 ASP 89 75 75 ASP ASP A . n A 1 90 PRO 90 76 76 PRO PRO A . n A 1 91 GLU 91 77 77 GLU GLU A . n A 1 92 ILE 92 78 78 ILE ILE A . n A 1 93 ASN 93 79 79 ASN ASN A . n A 1 94 PRO 94 80 80 PRO PRO A . n A 1 95 GLU 95 81 81 GLU GLU A . n A 1 96 GLY 96 82 82 GLY GLY A . n A 1 97 PHE 97 83 83 PHE PHE A . n A 1 98 CYS 98 84 84 CYS CYS A . n A 1 99 ILE 99 85 85 ILE ILE A . n A 1 100 LEU 100 86 86 LEU LEU A . n A 1 101 LEU 101 87 87 LEU LEU A . n A 1 102 ASP 102 88 88 ASP ASP A . n A 1 103 PHE 103 89 89 PHE PHE A . n A 1 104 MET 104 90 90 MET MET A . n A 1 105 TYR 105 91 91 TYR TYR A . n A 1 106 THR 106 92 92 THR THR A . n A 1 107 SER 107 93 93 SER SER A . n A 1 108 ARG 108 94 94 ARG ARG A . n A 1 109 LEU 109 95 95 LEU LEU A . n A 1 110 ASN 110 96 96 ASN ASN A . n A 1 111 LEU 111 97 97 LEU LEU A . n A 1 112 ARG 112 98 98 ARG ARG A . n A 1 113 GLU 113 99 99 GLU GLU A . n A 1 114 GLY 114 100 100 GLY GLY A . n A 1 115 ASN 115 101 101 ASN ASN A . n A 1 116 ILE 116 102 102 ILE ILE A . n A 1 117 MET 117 103 103 MET MET A . n A 1 118 ALA 118 104 104 ALA ALA A . n A 1 119 VAL 119 105 105 VAL VAL A . n A 1 120 MET 120 106 106 MET MET A . n A 1 121 ALA 121 107 107 ALA ALA A . n A 1 122 THR 122 108 108 THR THR A . n A 1 123 ALA 123 109 109 ALA ALA A . n A 1 124 MET 124 110 110 MET MET A . n A 1 125 TYR 125 111 111 TYR TYR A . n A 1 126 LEU 126 112 112 LEU LEU A . n A 1 127 GLN 127 113 113 GLN GLN A . n A 1 128 MET 128 114 114 MET MET A . n A 1 129 GLU 129 115 115 GLU GLU A . n A 1 130 HIS 130 116 116 HIS HIS A . n A 1 131 VAL 131 117 117 VAL VAL A . n A 1 132 VAL 132 118 118 VAL VAL A . n A 1 133 ASP 133 119 119 ASP ASP A . n A 1 134 THR 134 120 120 THR THR A . n A 1 135 CYS 135 121 121 CYS CYS A . n A 1 136 ARG 136 122 122 ARG ARG A . n A 1 137 LYS 137 123 123 LYS LYS A . n A 1 138 PHE 138 124 ? ? ? A . n A 1 139 ILE 139 125 ? ? ? A . n A 1 140 LYS 140 126 ? ? ? A . n A 1 141 ALA 141 127 ? ? ? A . n A 1 142 SER 142 128 ? ? ? A . n A 1 143 GLU 143 129 ? ? ? A . n B 1 1 GLY 1 -13 ? ? ? B . n B 1 2 SER 2 -12 ? ? ? B . n B 1 3 LEU 3 -11 ? ? ? B . n B 1 4 ASP 4 -10 ? ? ? B . n B 1 5 TYR 5 -9 ? ? ? B . n B 1 6 LYS 6 -8 ? ? ? B . n B 1 7 ASP 7 -7 ? ? ? B . n B 1 8 ASP 8 -6 ? ? ? B . n B 1 9 ASP 9 -5 ? ? ? B . n B 1 10 ASP 10 -4 ? ? ? B . n B 1 11 LYS 11 -3 ? ? ? B . n B 1 12 GLU 12 -2 ? ? ? B . n B 1 13 ASN 13 -1 ? ? ? B . n B 1 14 LEU 14 0 ? ? ? B . n B 1 15 TYR 15 1 ? ? ? B . n B 1 16 PHE 16 2 ? ? ? B . n B 1 17 GLN 17 3 ? ? ? B . n B 1 18 GLY 18 4 ? ? ? B . n B 1 19 ALA 19 5 ? ? ? B . n B 1 20 ASP 20 6 ? ? ? B . n B 1 21 SER 21 7 ? ? ? B . n B 1 22 CYS 22 8 ? ? ? B . n B 1 23 ILE 23 9 9 ILE ILE B . n B 1 24 GLN 24 10 10 GLN GLN B . n B 1 25 PHE 25 11 11 PHE PHE B . n B 1 26 THR 26 12 12 THR THR B . n B 1 27 ARG 27 13 13 ARG ARG B . n B 1 28 HIS 28 14 14 HIS HIS B . n B 1 29 ALA 29 15 15 ALA ALA B . n B 1 30 SER 30 16 16 SER SER B . n B 1 31 ASP 31 17 17 ASP ASP B . n B 1 32 VAL 32 18 18 VAL VAL B . n B 1 33 LEU 33 19 19 LEU LEU B . n B 1 34 LEU 34 20 20 LEU LEU B . n B 1 35 ASN 35 21 21 ASN ASN B . n B 1 36 LEU 36 22 22 LEU LEU B . n B 1 37 ASN 37 23 23 ASN ASN B . n B 1 38 ARG 38 24 24 ARG ARG B . n B 1 39 LEU 39 25 25 LEU LEU B . n B 1 40 ARG 40 26 26 ARG ARG B . n B 1 41 SER 41 27 27 SER SER B . n B 1 42 ARG 42 28 28 ARG ARG B . n B 1 43 ASP 43 29 29 ASP ASP B . n B 1 44 ILE 44 30 30 ILE ILE B . n B 1 45 LEU 45 31 31 LEU LEU B . n B 1 46 THR 46 32 32 THR THR B . n B 1 47 ASP 47 33 33 ASP ASP B . n B 1 48 VAL 48 34 34 VAL VAL B . n B 1 49 VAL 49 35 35 VAL VAL B . n B 1 50 ILE 50 36 36 ILE ILE B . n B 1 51 VAL 51 37 37 VAL VAL B . n B 1 52 VAL 52 38 38 VAL VAL B . n B 1 53 SER 53 39 39 SER SER B . n B 1 54 ARG 54 40 40 ARG ARG B . n B 1 55 GLU 55 41 41 GLU GLU B . n B 1 56 GLN 56 42 42 GLN GLN B . n B 1 57 PHE 57 43 43 PHE PHE B . n B 1 58 ARG 58 44 44 ARG ARG B . n B 1 59 ALA 59 45 45 ALA ALA B . n B 1 60 HIS 60 46 46 HIS HIS B . n B 1 61 LYS 61 47 47 LYS LYS B . n B 1 62 THR 62 48 48 THR THR B . n B 1 63 VAL 63 49 49 VAL VAL B . n B 1 64 LEU 64 50 50 LEU LEU B . n B 1 65 MET 65 51 51 MET MET B . n B 1 66 ALA 66 52 52 ALA ALA B . n B 1 67 CYS 67 53 53 CYS CYS B . n B 1 68 SER 68 54 54 SER SER B . n B 1 69 GLY 69 55 55 GLY GLY B . n B 1 70 LEU 70 56 56 LEU LEU B . n B 1 71 PHE 71 57 57 PHE PHE B . n B 1 72 TYR 72 58 58 TYR TYR B . n B 1 73 SER 73 59 59 SER SER B . n B 1 74 ILE 74 60 60 ILE ILE B . n B 1 75 PHE 75 61 61 PHE PHE B . n B 1 76 THR 76 62 62 THR THR B . n B 1 77 ASP 77 63 63 ASP ASP B . n B 1 78 GLN 78 64 64 GLN GLN B . n B 1 79 LEU 79 65 65 LEU LEU B . n B 1 80 LYS 80 66 66 LYS LYS B . n B 1 81 CYS 81 67 67 CYS CYS B . n B 1 82 ASN 82 68 68 ASN ASN B . n B 1 83 LEU 83 69 69 LEU LEU B . n B 1 84 SER 84 70 70 SER SER B . n B 1 85 VAL 85 71 71 VAL VAL B . n B 1 86 ILE 86 72 72 ILE ILE B . n B 1 87 ASN 87 73 73 ASN ASN B . n B 1 88 LEU 88 74 74 LEU LEU B . n B 1 89 ASP 89 75 75 ASP ASP B . n B 1 90 PRO 90 76 76 PRO PRO B . n B 1 91 GLU 91 77 77 GLU GLU B . n B 1 92 ILE 92 78 78 ILE ILE B . n B 1 93 ASN 93 79 79 ASN ASN B . n B 1 94 PRO 94 80 80 PRO PRO B . n B 1 95 GLU 95 81 81 GLU GLU B . n B 1 96 GLY 96 82 82 GLY GLY B . n B 1 97 PHE 97 83 83 PHE PHE B . n B 1 98 CYS 98 84 84 CYS CYS B . n B 1 99 ILE 99 85 85 ILE ILE B . n B 1 100 LEU 100 86 86 LEU LEU B . n B 1 101 LEU 101 87 87 LEU LEU B . n B 1 102 ASP 102 88 88 ASP ASP B . n B 1 103 PHE 103 89 89 PHE PHE B . n B 1 104 MET 104 90 90 MET MET B . n B 1 105 TYR 105 91 91 TYR TYR B . n B 1 106 THR 106 92 92 THR THR B . n B 1 107 SER 107 93 93 SER SER B . n B 1 108 ARG 108 94 94 ARG ARG B . n B 1 109 LEU 109 95 95 LEU LEU B . n B 1 110 ASN 110 96 96 ASN ASN B . n B 1 111 LEU 111 97 97 LEU LEU B . n B 1 112 ARG 112 98 98 ARG ARG B . n B 1 113 GLU 113 99 99 GLU GLU B . n B 1 114 GLY 114 100 100 GLY GLY B . n B 1 115 ASN 115 101 101 ASN ASN B . n B 1 116 ILE 116 102 102 ILE ILE B . n B 1 117 MET 117 103 103 MET MET B . n B 1 118 ALA 118 104 104 ALA ALA B . n B 1 119 VAL 119 105 105 VAL VAL B . n B 1 120 MET 120 106 106 MET MET B . n B 1 121 ALA 121 107 107 ALA ALA B . n B 1 122 THR 122 108 108 THR THR B . n B 1 123 ALA 123 109 109 ALA ALA B . n B 1 124 MET 124 110 110 MET MET B . n B 1 125 TYR 125 111 111 TYR TYR B . n B 1 126 LEU 126 112 112 LEU LEU B . n B 1 127 GLN 127 113 113 GLN GLN B . n B 1 128 MET 128 114 114 MET MET B . n B 1 129 GLU 129 115 115 GLU GLU B . n B 1 130 HIS 130 116 116 HIS HIS B . n B 1 131 VAL 131 117 117 VAL VAL B . n B 1 132 VAL 132 118 118 VAL VAL B . n B 1 133 ASP 133 119 119 ASP ASP B . n B 1 134 THR 134 120 120 THR THR B . n B 1 135 CYS 135 121 121 CYS CYS B . n B 1 136 ARG 136 122 122 ARG ARG B . n B 1 137 LYS 137 123 123 LYS LYS B . n B 1 138 PHE 138 124 124 PHE PHE B . n B 1 139 ILE 139 125 125 ILE ILE B . n B 1 140 LYS 140 126 126 LYS LYS B . n B 1 141 ALA 141 127 127 ALA ALA B . n B 1 142 SER 142 128 128 SER SER B . n B 1 143 GLU 143 129 129 GLU GLU B . n C 2 1 MET 1 -24 ? ? ? C . n C 2 2 SER 2 -23 ? ? ? C . n C 2 3 TYR 3 -22 ? ? ? C . n C 2 4 TYR 4 -21 ? ? ? C . n C 2 5 HIS 5 -20 ? ? ? C . n C 2 6 HIS 6 -19 ? ? ? C . n C 2 7 HIS 7 -18 ? ? ? C . n C 2 8 HIS 8 -17 ? ? ? C . n C 2 9 HIS 9 -16 ? ? ? C . n C 2 10 HIS 10 -15 ? ? ? C . n C 2 11 ASP 11 -14 ? ? ? C . n C 2 12 TYR 12 -13 ? ? ? C . n C 2 13 ASP 13 -12 ? ? ? C . n C 2 14 ILE 14 -11 ? ? ? C . n C 2 15 PRO 15 -10 ? ? ? C . n C 2 16 THR 16 -9 ? ? ? C . n C 2 17 THR 17 -8 ? ? ? C . n C 2 18 GLY 18 -7 ? ? ? C . n C 2 19 LEU 19 -6 ? ? ? C . n C 2 20 VAL 20 -5 ? ? ? C . n C 2 21 PRO 21 -4 ? ? ? C . n C 2 22 ARG 22 -3 ? ? ? C . n C 2 23 GLY 23 -2 ? ? ? C . n C 2 24 SER 24 -1 ? ? ? C . n C 2 25 MET 25 0 ? ? ? C . n C 2 26 MET 26 1 ? ? ? C . n C 2 27 ALA 27 2 ? ? ? C . n C 2 28 GLY 28 3 ? ? ? C . n C 2 29 GLU 29 4 ? ? ? C . n C 2 30 GLY 30 5 ? ? ? C . n C 2 31 ASP 31 6 ? ? ? C . n C 2 32 GLN 32 7 ? ? ? C . n C 2 33 GLN 33 8 ? ? ? C . n C 2 34 ASP 34 9 ? ? ? C . n C 2 35 ALA 35 10 ? ? ? C . n C 2 36 ALA 36 11 ? ? ? C . n C 2 37 HIS 37 12 ? ? ? C . n C 2 38 ASN 38 13 ? ? ? C . n C 2 39 MET 39 14 ? ? ? C . n C 2 40 GLY 40 15 ? ? ? C . n C 2 41 ASN 41 16 ? ? ? C . n C 2 42 HIS 42 17 ? ? ? C . n C 2 43 LEU 43 18 ? ? ? C . n C 2 44 PRO 44 19 ? ? ? C . n C 2 45 LEU 45 20 ? ? ? C . n C 2 46 LEU 46 21 ? ? ? C . n C 2 47 PRO 47 22 ? ? ? C . n C 2 48 ALA 48 23 ? ? ? C . n C 2 49 GLU 49 24 ? ? ? C . n C 2 50 SER 50 25 ? ? ? C . n C 2 51 GLU 51 26 ? ? ? C . n C 2 52 GLU 52 27 ? ? ? C . n C 2 53 GLU 53 28 ? ? ? C . n C 2 54 ASP 54 29 ? ? ? C . n C 2 55 GLU 55 30 ? ? ? C . n C 2 56 MET 56 31 ? ? ? C . n C 2 57 GLU 57 32 ? ? ? C . n C 2 58 VAL 58 33 ? ? ? C . n C 2 59 GLU 59 34 ? ? ? C . n C 2 60 ASP 60 35 ? ? ? C . n C 2 61 GLN 61 36 ? ? ? C . n C 2 62 ASP 62 37 ? ? ? C . n C 2 63 SER 63 38 ? ? ? C . n C 2 64 LYS 64 39 ? ? ? C . n C 2 65 GLU 65 40 ? ? ? C . n C 2 66 ALA 66 41 ? ? ? C . n C 2 67 LYS 67 42 ? ? ? C . n C 2 68 LYS 68 43 ? ? ? C . n C 2 69 PRO 69 44 ? ? ? C . n C 2 70 ASN 70 45 ? ? ? C . n C 2 71 ILE 71 46 ? ? ? C . n C 2 72 ILE 72 47 ? ? ? C . n C 2 73 ASN 73 48 ? ? ? C . n C 2 74 PHE 74 49 ? ? ? C . n C 2 75 ASP 75 50 ? ? ? C . n C 2 76 THR 76 51 ? ? ? C . n C 2 77 SER 77 52 ? ? ? C . n C 2 78 LEU 78 53 ? ? ? C . n C 2 79 PRO 79 54 ? ? ? C . n C 2 80 THR 80 55 ? ? ? C . n C 2 81 SER 81 56 ? ? ? C . n C 2 82 HIS 82 57 ? ? ? C . n C 2 83 THR 83 58 ? ? ? C . n C 2 84 TYR 84 59 ? ? ? C . n C 2 85 LEU 85 60 ? ? ? C . n C 2 86 GLY 86 61 ? ? ? C . n C 2 87 ALA 87 62 62 ALA ALA C . n C 2 88 ASP 88 63 63 ASP ASP C . n C 2 89 MET 89 64 64 MET MET C . n C 2 90 GLU 90 65 65 GLU GLU C . n C 2 91 GLU 91 66 66 GLU GLU C . n C 2 92 PHE 92 67 67 PHE PHE C . n C 2 93 HIS 93 68 68 HIS HIS C . n C 2 94 GLY 94 69 69 GLY GLY C . n C 2 95 ARG 95 70 70 ARG ARG C . n C 2 96 THR 96 71 71 THR THR C . n C 2 97 LEU 97 72 72 LEU LEU C . n C 2 98 HIS 98 73 73 HIS HIS C . n C 2 99 ASP 99 74 74 ASP ASP C . n C 2 100 ASP 100 75 75 ASP ASP C . n C 2 101 ASP 101 76 76 ASP ASP C . n C 2 102 SER 102 77 77 SER SER C . n C 2 103 CYS 103 78 78 CYS CYS C . n C 2 104 GLN 104 79 79 GLN GLN C . n C 2 105 VAL 105 80 80 VAL VAL C . n C 2 106 ILE 106 81 81 ILE ILE C . n C 2 107 PRO 107 82 82 PRO PRO C . n C 2 108 VAL 108 83 83 VAL VAL C . n C 2 109 LEU 109 84 84 LEU LEU C . n C 2 110 PRO 110 85 85 PRO PRO C . n C 2 111 GLN 111 86 86 GLN GLN C . n C 2 112 VAL 112 87 87 VAL VAL C . n C 2 113 MET 113 88 88 MET MET C . n C 2 114 MET 114 89 89 MET MET C . n C 2 115 ILE 115 90 90 ILE ILE C . n C 2 116 LEU 116 91 91 LEU LEU C . n C 2 117 ILE 117 92 92 ILE ILE C . n C 2 118 PRO 118 93 93 PRO PRO C . n C 2 119 GLY 119 94 94 GLY GLY C . n C 2 120 GLN 120 95 95 GLN GLN C . n C 2 121 THR 121 96 96 THR THR C . n C 2 122 LEU 122 97 97 LEU LEU C . n C 2 123 PRO 123 98 98 PRO PRO C . n C 2 124 LEU 124 99 99 LEU LEU C . n C 2 125 GLN 125 100 100 GLN GLN C . n C 2 126 LEU 126 101 101 LEU LEU C . n C 2 127 PHE 127 102 102 PHE PHE C . n C 2 128 HIS 128 103 103 HIS HIS C . n C 2 129 PRO 129 104 104 PRO PRO C . n C 2 130 GLN 130 105 105 GLN GLN C . n C 2 131 GLU 131 106 106 GLU GLU C . n C 2 132 VAL 132 107 107 VAL VAL C . n C 2 133 SER 133 108 108 SER SER C . n C 2 134 MET 134 109 109 MET MET C . n C 2 135 VAL 135 110 110 VAL VAL C . n C 2 136 ARG 136 111 111 ARG ARG C . n C 2 137 ASN 137 112 112 ASN ASN C . n C 2 138 LEU 138 113 113 LEU LEU C . n C 2 139 ILE 139 114 114 ILE ILE C . n C 2 140 GLN 140 115 115 GLN GLN C . n C 2 141 LYS 141 116 116 LYS LYS C . n C 2 142 ASP 142 117 117 ASP ASP C . n C 2 143 ARG 143 118 118 ARG ARG C . n C 2 144 THR 144 119 119 THR THR C . n C 2 145 PHE 145 120 120 PHE PHE C . n C 2 146 ALA 146 121 121 ALA ALA C . n C 2 147 VAL 147 122 122 VAL VAL C . n C 2 148 LEU 148 123 123 LEU LEU C . n C 2 149 ALA 149 124 124 ALA ALA C . n C 2 150 TYR 150 125 125 TYR TYR C . n C 2 151 SER 151 126 126 SER SER C . n C 2 152 ASN 152 127 127 ASN ASN C . n C 2 153 VAL 153 128 128 VAL VAL C . n C 2 154 GLN 154 129 129 GLN GLN C . n C 2 155 GLU 155 130 130 GLU GLU C . n C 2 156 ARG 156 131 131 ARG ARG C . n C 2 157 GLU 157 132 132 GLU GLU C . n C 2 158 ALA 158 133 133 ALA ALA C . n C 2 159 GLN 159 134 134 GLN GLN C . n C 2 160 PHE 160 135 135 PHE PHE C . n C 2 161 GLY 161 136 136 GLY GLY C . n C 2 162 THR 162 137 137 THR THR C . n C 2 163 THR 163 138 138 THR THR C . n C 2 164 ALA 164 139 139 ALA ALA C . n C 2 165 GLU 165 140 140 GLU GLU C . n C 2 166 ILE 166 141 141 ILE ILE C . n C 2 167 TYR 167 142 142 TYR TYR C . n C 2 168 ALA 168 143 143 ALA ALA C . n C 2 169 TYR 169 144 144 TYR TYR C . n C 2 170 ARG 170 145 145 ARG ARG C . n C 2 171 GLU 171 146 146 GLU GLU C . n C 2 172 GLU 172 147 147 GLU GLU C . n C 2 173 GLN 173 148 148 GLN GLN C . n C 2 174 ASP 174 149 149 ASP ASP C . n C 2 175 PHE 175 150 150 PHE PHE C . n C 2 176 GLY 176 151 151 GLY GLY C . n C 2 177 ILE 177 152 152 ILE ILE C . n C 2 178 GLU 178 153 153 GLU GLU C . n C 2 179 ILE 179 154 154 ILE ILE C . n C 2 180 VAL 180 155 155 VAL VAL C . n C 2 181 LYS 181 156 156 LYS LYS C . n C 2 182 VAL 182 157 157 VAL VAL C . n C 2 183 LYS 183 158 158 LYS LYS C . n C 2 184 ALA 184 159 159 ALA ALA C . n C 2 185 ILE 185 160 160 ILE ILE C . n C 2 186 GLY 186 161 161 GLY GLY C . n C 2 187 ARG 187 162 162 ARG ARG C . n C 2 188 GLN 188 163 163 GLN GLN C . n C 2 189 ARG 189 164 164 ARG ARG C . n C 2 190 PHE 190 165 165 PHE PHE C . n C 2 191 LYS 191 166 166 LYS LYS C . n C 2 192 VAL 192 167 167 VAL VAL C . n C 2 193 LEU 193 168 168 LEU LEU C . n C 2 194 GLU 194 169 169 GLU GLU C . n C 2 195 LEU 195 170 170 LEU LEU C . n C 2 196 ARG 196 171 171 ARG ARG C . n C 2 197 THR 197 172 172 THR THR C . n C 2 198 GLN 198 173 173 GLN GLN C . n C 2 199 SER 199 174 174 SER SER C . n C 2 200 ASP 200 175 175 ASP ASP C . n C 2 201 GLY 201 176 176 GLY GLY C . n C 2 202 ILE 202 177 177 ILE ILE C . n C 2 203 GLN 203 178 178 GLN GLN C . n C 2 204 GLN 204 179 179 GLN GLN C . n C 2 205 ALA 205 180 180 ALA ALA C . n C 2 206 LYS 206 181 181 LYS LYS C . n C 2 207 VAL 207 182 182 VAL VAL C . n C 2 208 GLN 208 183 183 GLN GLN C . n C 2 209 ILE 209 184 184 ILE ILE C . n C 2 210 LEU 210 185 185 LEU LEU C . n C 2 211 PRO 211 186 186 PRO PRO C . n C 2 212 GLU 212 187 187 GLU GLU C . n C 2 213 CYS 213 188 ? ? ? C . n C 2 214 VAL 214 189 ? ? ? C . n C 2 215 LEU 215 190 ? ? ? C . n C 2 216 PRO 216 191 ? ? ? C . n C 2 217 SER 217 192 ? ? ? C . n C 2 218 THR 218 193 ? ? ? C . n C 2 219 MET 219 194 ? ? ? C . n C 2 220 SER 220 195 ? ? ? C . n C 2 221 ALA 221 196 ? ? ? C . n C 2 222 VAL 222 197 ? ? ? C . n C 2 223 GLN 223 198 ? ? ? C . n C 2 224 LEU 224 199 ? ? ? C . n C 2 225 GLU 225 200 ? ? ? C . n C 2 226 SER 226 201 ? ? ? C . n C 2 227 LEU 227 202 ? ? ? C . n C 2 228 ASN 228 203 ? ? ? C . n C 2 229 LYS 229 204 ? ? ? C . n C 2 230 CYS 230 205 ? ? ? C . n C 2 231 GLN 231 206 ? ? ? C . n C 2 232 ILE 232 207 ? ? ? C . n C 2 233 PHE 233 208 ? ? ? C . n C 2 234 PRO 234 209 ? ? ? C . n C 2 235 SER 235 210 ? ? ? C . n C 2 236 LYS 236 211 ? ? ? C . n C 2 237 PRO 237 212 ? ? ? C . n C 2 238 VAL 238 213 ? ? ? C . n C 2 239 SER 239 214 ? ? ? C . n C 2 240 ARG 240 215 ? ? ? C . n C 2 241 GLU 241 216 ? ? ? C . n C 2 242 ASP 242 217 ? ? ? C . n C 2 243 GLN 243 218 ? ? ? C . n C 2 244 CYS 244 219 ? ? ? C . n C 2 245 SER 245 220 220 SER SER C . n C 2 246 TYR 246 221 221 TYR TYR C . n C 2 247 LYS 247 222 222 LYS LYS C . n C 2 248 TRP 248 223 223 TRP TRP C . n C 2 249 TRP 249 224 224 TRP TRP C . n C 2 250 GLN 250 225 225 GLN GLN C . n C 2 251 LYS 251 226 226 LYS LYS C . n C 2 252 TYR 252 227 227 TYR TYR C . n C 2 253 GLN 253 228 228 GLN GLN C . n C 2 254 LYS 254 229 229 LYS LYS C . n C 2 255 ARG 255 230 230 ARG ARG C . n C 2 256 LYS 256 231 231 LYS LYS C . n C 2 257 PHE 257 232 232 PHE PHE C . n C 2 258 HIS 258 233 233 HIS HIS C . n C 2 259 CYS 259 234 234 CYS CYS C . n C 2 260 ALA 260 235 235 ALA ALA C . n C 2 261 ASN 261 236 236 ASN ASN C . n C 2 262 LEU 262 237 237 LEU LEU C . n C 2 263 THR 263 238 238 THR THR C . n C 2 264 SER 264 239 239 SER SER C . n C 2 265 TRP 265 240 240 TRP TRP C . n C 2 266 PRO 266 241 241 PRO PRO C . n C 2 267 ARG 267 242 242 ARG ARG C . n C 2 268 TRP 268 243 243 TRP TRP C . n C 2 269 LEU 269 244 244 LEU LEU C . n C 2 270 TYR 270 245 245 TYR TYR C . n C 2 271 SER 271 246 246 SER SER C . n C 2 272 LEU 272 247 247 LEU LEU C . n C 2 273 TYR 273 248 248 TYR TYR C . n C 2 274 ASP 274 249 249 ASP ASP C . n C 2 275 ALA 275 250 250 ALA ALA C . n C 2 276 GLU 276 251 251 GLU GLU C . n C 2 277 THR 277 252 252 THR THR C . n C 2 278 LEU 278 253 253 LEU LEU C . n C 2 279 MET 279 254 254 MET MET C . n C 2 280 ASP 280 255 255 ASP ASP C . n C 2 281 ARG 281 256 256 ARG ARG C . n C 2 282 ILE 282 257 257 ILE ILE C . n C 2 283 LYS 283 258 258 LYS LYS C . n C 2 284 LYS 284 259 259 LYS LYS C . n C 2 285 GLN 285 260 260 GLN GLN C . n C 2 286 LEU 286 261 261 LEU LEU C . n C 2 287 ARG 287 262 262 ARG ARG C . n C 2 288 GLU 288 263 263 GLU GLU C . n C 2 289 TRP 289 264 264 TRP TRP C . n C 2 290 ASP 290 265 265 ASP ASP C . n C 2 291 GLU 291 266 266 GLU GLU C . n C 2 292 ASN 292 267 267 ASN ASN C . n C 2 293 LEU 293 268 268 LEU LEU C . n C 2 294 LYS 294 269 269 LYS LYS C . n C 2 295 ASP 295 270 270 ASP ASP C . n C 2 296 ASP 296 271 271 ASP ASP C . n C 2 297 SER 297 272 272 SER SER C . n C 2 298 LEU 298 273 273 LEU LEU C . n C 2 299 PRO 299 274 274 PRO PRO C . n C 2 300 SER 300 275 275 SER SER C . n C 2 301 ASN 301 276 276 ASN ASN C . n C 2 302 PRO 302 277 277 PRO PRO C . n C 2 303 ILE 303 278 278 ILE ILE C . n C 2 304 ASP 304 279 279 ASP ASP C . n C 2 305 PHE 305 280 280 PHE PHE C . n C 2 306 SER 306 281 281 SER SER C . n C 2 307 TYR 307 282 282 TYR TYR C . n C 2 308 ARG 308 283 283 ARG ARG C . n C 2 309 VAL 309 284 284 VAL VAL C . n C 2 310 ALA 310 285 285 ALA ALA C . n C 2 311 ALA 311 286 286 ALA ALA C . n C 2 312 CYS 312 287 287 CYS CYS C . n C 2 313 LEU 313 288 288 LEU LEU C . n C 2 314 PRO 314 289 289 PRO PRO C . n C 2 315 ILE 315 290 290 ILE ILE C . n C 2 316 ASP 316 291 291 ASP ASP C . n C 2 317 ASP 317 292 292 ASP ASP C . n C 2 318 VAL 318 293 293 VAL VAL C . n C 2 319 LEU 319 294 294 LEU LEU C . n C 2 320 ARG 320 295 295 ARG ARG C . n C 2 321 ILE 321 296 296 ILE ILE C . n C 2 322 GLN 322 297 297 GLN GLN C . n C 2 323 LEU 323 298 298 LEU LEU C . n C 2 324 LEU 324 299 299 LEU LEU C . n C 2 325 LYS 325 300 300 LYS LYS C . n C 2 326 ILE 326 301 301 ILE ILE C . n C 2 327 GLY 327 302 302 GLY GLY C . n C 2 328 SER 328 303 303 SER SER C . n C 2 329 ALA 329 304 304 ALA ALA C . n C 2 330 ILE 330 305 305 ILE ILE C . n C 2 331 GLN 331 306 306 GLN GLN C . n C 2 332 ARG 332 307 307 ARG ARG C . n C 2 333 LEU 333 308 308 LEU LEU C . n C 2 334 ARG 334 309 309 ARG ARG C . n C 2 335 CYS 335 310 310 CYS CYS C . n C 2 336 GLU 336 311 311 GLU GLU C . n C 2 337 LEU 337 312 312 LEU LEU C . n C 2 338 ASP 338 313 313 ASP ASP C . n C 2 339 ILE 339 314 314 ILE ILE C . n C 2 340 MET 340 315 315 MET MET C . n C 2 341 ASN 341 316 316 ASN ASN C . n C 2 342 LYS 342 317 317 LYS LYS C . n C 2 343 CYS 343 318 318 CYS CYS C . n C 2 344 THR 344 319 319 THR THR C . n C 2 345 SER 345 320 320 SER SER C . n C 2 346 LEU 346 321 321 LEU LEU C . n C 2 347 CYS 347 322 322 CYS CYS C . n C 2 348 CYS 348 323 323 CYS CYS C . n C 2 349 LYS 349 324 324 LYS LYS C . n C 2 350 GLN 350 325 325 GLN GLN C . n C 2 351 CYS 351 326 326 CYS CYS C . n C 2 352 GLN 352 327 327 GLN GLN C . n C 2 353 GLU 353 328 328 GLU GLU C . n C 2 354 THR 354 329 329 THR THR C . n C 2 355 GLU 355 330 330 GLU GLU C . n C 2 356 ILE 356 331 331 ILE ILE C . n C 2 357 THR 357 332 332 THR THR C . n C 2 358 THR 358 333 333 THR THR C . n C 2 359 LYS 359 334 334 LYS LYS C . n C 2 360 ASN 360 335 335 ASN ASN C . n C 2 361 GLU 361 336 336 GLU GLU C . n C 2 362 ILE 362 337 337 ILE ILE C . n C 2 363 PHE 363 338 338 PHE PHE C . n C 2 364 SER 364 339 339 SER SER C . n C 2 365 LEU 365 340 340 LEU LEU C . n C 2 366 SER 366 341 341 SER SER C . n C 2 367 LEU 367 342 342 LEU LEU C . n C 2 368 CYS 368 343 343 CYS CYS C . n C 2 369 GLY 369 344 344 GLY GLY C . n C 2 370 PRO 370 345 345 PRO PRO C . n C 2 371 MET 371 346 346 MET MET C . n C 2 372 ALA 372 347 347 ALA ALA C . n C 2 373 ALA 373 348 348 ALA ALA C . n C 2 374 TYR 374 349 349 TYR TYR C . n C 2 375 VAL 375 350 350 VAL VAL C . n C 2 376 ASN 376 351 351 ASN ASN C . n C 2 377 PRO 377 352 352 PRO PRO C . n C 2 378 HIS 378 353 353 HIS HIS C . n C 2 379 GLY 379 354 354 GLY GLY C . n C 2 380 TYR 380 355 355 TYR TYR C . n C 2 381 VAL 381 356 356 VAL VAL C . n C 2 382 HIS 382 357 357 HIS HIS C . n C 2 383 GLU 383 358 358 GLU GLU C . n C 2 384 THR 384 359 359 THR THR C . n C 2 385 LEU 385 360 360 LEU LEU C . n C 2 386 THR 386 361 361 THR THR C . n C 2 387 VAL 387 362 362 VAL VAL C . n C 2 388 TYR 388 363 363 TYR TYR C . n C 2 389 LYS 389 364 364 LYS LYS C . n C 2 390 ALA 390 365 365 ALA ALA C . n C 2 391 CYS 391 366 366 CYS CYS C . n C 2 392 ASN 392 367 367 ASN ASN C . n C 2 393 LEU 393 368 368 LEU LEU C . n C 2 394 ASN 394 369 369 ASN ASN C . n C 2 395 LEU 395 370 370 LEU LEU C . n C 2 396 ILE 396 371 371 ILE ILE C . n C 2 397 GLY 397 372 372 GLY GLY C . n C 2 398 ARG 398 373 373 ARG ARG C . n C 2 399 PRO 399 374 374 PRO PRO C . n C 2 400 SER 400 375 375 SER SER C . n C 2 401 THR 401 376 376 THR THR C . n C 2 402 GLU 402 377 377 GLU GLU C . n C 2 403 HIS 403 378 378 HIS HIS C . n C 2 404 SER 404 379 379 SER SER C . n C 2 405 TRP 405 380 380 TRP TRP C . n C 2 406 PHE 406 381 381 PHE PHE C . n C 2 407 PRO 407 382 382 PRO PRO C . n C 2 408 GLY 408 383 383 GLY GLY C . n C 2 409 TYR 409 384 384 TYR TYR C . n C 2 410 ALA 410 385 385 ALA ALA C . n C 2 411 TRP 411 386 386 TRP TRP C . n C 2 412 THR 412 387 387 THR THR C . n C 2 413 VAL 413 388 388 VAL VAL C . n C 2 414 ALA 414 389 389 ALA ALA C . n C 2 415 GLN 415 390 390 GLN GLN C . n C 2 416 CYS 416 391 391 CYS CYS C . n C 2 417 LYS 417 392 392 LYS LYS C . n C 2 418 ILE 418 393 393 ILE ILE C . n C 2 419 CYS 419 394 394 CYS CYS C . n C 2 420 ALA 420 395 395 ALA ALA C . n C 2 421 SER 421 396 396 SER SER C . n C 2 422 HIS 422 397 397 HIS HIS C . n C 2 423 ILE 423 398 398 ILE ILE C . n C 2 424 GLY 424 399 399 GLY GLY C . n C 2 425 TRP 425 400 400 TRP TRP C . n C 2 426 LYS 426 401 401 LYS LYS C . n C 2 427 PHE 427 402 402 PHE PHE C . n C 2 428 THR 428 403 403 THR THR C . n C 2 429 ALA 429 404 404 ALA ALA C . n C 2 430 THR 430 405 405 THR THR C . n C 2 431 LYS 431 406 406 LYS LYS C . n C 2 432 LYS 432 407 407 LYS LYS C . n C 2 433 ASP 433 408 408 ASP ASP C . n C 2 434 MET 434 409 409 MET MET C . n C 2 435 SER 435 410 410 SER SER C . n C 2 436 PRO 436 411 411 PRO PRO C . n C 2 437 GLN 437 412 412 GLN GLN C . n C 2 438 LYS 438 413 413 LYS LYS C . n C 2 439 PHE 439 414 414 PHE PHE C . n C 2 440 TRP 440 415 415 TRP TRP C . n C 2 441 GLY 441 416 416 GLY GLY C . n C 2 442 LEU 442 417 417 LEU LEU C . n C 2 443 THR 443 418 418 THR THR C . n C 2 444 ARG 444 419 419 ARG ARG C . n C 2 445 SER 445 420 420 SER SER C . n C 2 446 ALA 446 421 421 ALA ALA C . n C 2 447 LEU 447 422 422 LEU LEU C . n C 2 448 LEU 448 423 423 LEU LEU C . n C 2 449 PRO 449 424 424 PRO PRO C . n C 2 450 THR 450 425 425 THR THR C . n C 2 451 ILE 451 426 426 ILE ILE C . n C 2 452 PRO 452 427 ? ? ? C . n C 2 453 ASP 453 428 ? ? ? C . n C 2 454 THR 454 429 ? ? ? C . n C 2 455 GLU 455 430 ? ? ? C . n C 2 456 ASP 456 431 ? ? ? C . n C 2 457 GLU 457 432 ? ? ? C . n C 2 458 ILE 458 433 ? ? ? C . n C 2 459 SER 459 434 ? ? ? C . n C 2 460 PRO 460 435 ? ? ? C . n C 2 461 ASP 461 436 ? ? ? C . n C 2 462 LYS 462 437 ? ? ? C . n C 2 463 VAL 463 438 ? ? ? C . n C 2 464 ILE 464 439 ? ? ? C . n C 2 465 LEU 465 440 ? ? ? C . n C 2 466 CYS 466 441 ? ? ? C . n C 2 467 LEU 467 442 ? ? ? C . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id A1CTU _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id A1CTU _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 A1CTU 1 501 1002 A1CTU LIG C . E 4 ZN 1 502 3999 ZN ZN C . # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9YA9 _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9YA9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9YA9 _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9YA9 _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 3.09 _refine.ls_d_res_low ? _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work ? _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'REAL-SPACE (WEIGHTED MAP SUM AT ATOM CENTERS)' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_Zscore _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.003 ? 4753 ? f_bond_d ? ? ? 'ELECTRON MICROSCOPY' ? 0.508 ? 6437 ? f_angle_d ? ? ? 'ELECTRON MICROSCOPY' ? 12.724 ? 1806 ? f_dihedral_angle_d ? ? ? 'ELECTRON MICROSCOPY' ? 0.041 ? 728 ? f_chiral_restr ? ? ? 'ELECTRON MICROSCOPY' ? 0.005 ? 815 ? f_plane_restr ? ? ? # _struct.entry_id 9YA9 _struct.title ;Cryo-EM structure of ternary complex BCL6-CRBN-DDB1 with BMS-986458 (local refined), a potent and selective BCL6 ligand directed degrader (LDD) ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9YA9 _struct_keywords.text 'Cereblon, BCL6, LDD, degrader, E3, LIGASE' _struct_keywords.pdbx_keywords LIGASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP BCL6_HUMAN P41182 ? 1 ;ADSCIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKCNLSVINLDPEINPEGFC ILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKASE ; 5 2 UNP CRBN_HUMAN Q96SW2 ? 2 ;MAGEGDQQDAAHNMGNHLPLLPAESEEEDEMEVEDQDSKEAKKPNIINFDTSLPTSHTYLGADMEEFHGRTLHDDDSCQV IPVLPQVMMILIPGQTLPLQLFHPQEVSMVRNLIQKDRTFAVLAYSNVQEREAQFGTTAEIYAYREEQDFGIEIVKVKAI GRQRFKVLELRTQSDGIQQAKVQILPECVLPSTMSAVQLESLNKCQIFPSKPVSREDQCSYKWWQKYQKRKFHCANLTSW PRWLYSLYDAETLMDRIKKQLREWDENLKDDSLPSNPIDFSYRVAACLPIDDVLRIQLLKIGSAIQRLRCELDIMNKCTS LCCKQCQETEITTKNEIFSLSLCGPMAAYVNPHGYVHETLTVYKACNLNLIGRPSTEHSWFPGYAWTVAQCKICASHIGW KFTATKKDMSPQKFWGLTRSALLPTIPDTEDEISPDKVILCL ; 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9YA9 A 19 ? 143 ? P41182 5 ? 129 ? 5 129 2 1 9YA9 B 19 ? 143 ? P41182 5 ? 129 ? 5 129 3 2 9YA9 C 26 ? 467 ? Q96SW2 1 ? 442 ? 1 442 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 9YA9 GLY A 1 ? UNP P41182 ? ? 'expression tag' -13 1 1 9YA9 SER A 2 ? UNP P41182 ? ? 'expression tag' -12 2 1 9YA9 LEU A 3 ? UNP P41182 ? ? 'expression tag' -11 3 1 9YA9 ASP A 4 ? UNP P41182 ? ? 'expression tag' -10 4 1 9YA9 TYR A 5 ? UNP P41182 ? ? 'expression tag' -9 5 1 9YA9 LYS A 6 ? UNP P41182 ? ? 'expression tag' -8 6 1 9YA9 ASP A 7 ? UNP P41182 ? ? 'expression tag' -7 7 1 9YA9 ASP A 8 ? UNP P41182 ? ? 'expression tag' -6 8 1 9YA9 ASP A 9 ? UNP P41182 ? ? 'expression tag' -5 9 1 9YA9 ASP A 10 ? UNP P41182 ? ? 'expression tag' -4 10 1 9YA9 LYS A 11 ? UNP P41182 ? ? 'expression tag' -3 11 1 9YA9 GLU A 12 ? UNP P41182 ? ? 'expression tag' -2 12 1 9YA9 ASN A 13 ? UNP P41182 ? ? 'expression tag' -1 13 1 9YA9 LEU A 14 ? UNP P41182 ? ? 'expression tag' 0 14 1 9YA9 TYR A 15 ? UNP P41182 ? ? 'expression tag' 1 15 1 9YA9 PHE A 16 ? UNP P41182 ? ? 'expression tag' 2 16 1 9YA9 GLN A 17 ? UNP P41182 ? ? 'expression tag' 3 17 1 9YA9 GLY A 18 ? UNP P41182 ? ? 'expression tag' 4 18 2 9YA9 GLY B 1 ? UNP P41182 ? ? 'expression tag' -13 19 2 9YA9 SER B 2 ? UNP P41182 ? ? 'expression tag' -12 20 2 9YA9 LEU B 3 ? UNP P41182 ? ? 'expression tag' -11 21 2 9YA9 ASP B 4 ? UNP P41182 ? ? 'expression tag' -10 22 2 9YA9 TYR B 5 ? UNP P41182 ? ? 'expression tag' -9 23 2 9YA9 LYS B 6 ? UNP P41182 ? ? 'expression tag' -8 24 2 9YA9 ASP B 7 ? UNP P41182 ? ? 'expression tag' -7 25 2 9YA9 ASP B 8 ? UNP P41182 ? ? 'expression tag' -6 26 2 9YA9 ASP B 9 ? UNP P41182 ? ? 'expression tag' -5 27 2 9YA9 ASP B 10 ? UNP P41182 ? ? 'expression tag' -4 28 2 9YA9 LYS B 11 ? UNP P41182 ? ? 'expression tag' -3 29 2 9YA9 GLU B 12 ? UNP P41182 ? ? 'expression tag' -2 30 2 9YA9 ASN B 13 ? UNP P41182 ? ? 'expression tag' -1 31 2 9YA9 LEU B 14 ? UNP P41182 ? ? 'expression tag' 0 32 2 9YA9 TYR B 15 ? UNP P41182 ? ? 'expression tag' 1 33 2 9YA9 PHE B 16 ? UNP P41182 ? ? 'expression tag' 2 34 2 9YA9 GLN B 17 ? UNP P41182 ? ? 'expression tag' 3 35 2 9YA9 GLY B 18 ? UNP P41182 ? ? 'expression tag' 4 36 3 9YA9 MET C 1 ? UNP Q96SW2 ? ? 'expression tag' -24 37 3 9YA9 SER C 2 ? UNP Q96SW2 ? ? 'expression tag' -23 38 3 9YA9 TYR C 3 ? UNP Q96SW2 ? ? 'expression tag' -22 39 3 9YA9 TYR C 4 ? UNP Q96SW2 ? ? 'expression tag' -21 40 3 9YA9 HIS C 5 ? UNP Q96SW2 ? ? 'expression tag' -20 41 3 9YA9 HIS C 6 ? UNP Q96SW2 ? ? 'expression tag' -19 42 3 9YA9 HIS C 7 ? UNP Q96SW2 ? ? 'expression tag' -18 43 3 9YA9 HIS C 8 ? UNP Q96SW2 ? ? 'expression tag' -17 44 3 9YA9 HIS C 9 ? UNP Q96SW2 ? ? 'expression tag' -16 45 3 9YA9 HIS C 10 ? UNP Q96SW2 ? ? 'expression tag' -15 46 3 9YA9 ASP C 11 ? UNP Q96SW2 ? ? 'expression tag' -14 47 3 9YA9 TYR C 12 ? UNP Q96SW2 ? ? 'expression tag' -13 48 3 9YA9 ASP C 13 ? UNP Q96SW2 ? ? 'expression tag' -12 49 3 9YA9 ILE C 14 ? UNP Q96SW2 ? ? 'expression tag' -11 50 3 9YA9 PRO C 15 ? UNP Q96SW2 ? ? 'expression tag' -10 51 3 9YA9 THR C 16 ? UNP Q96SW2 ? ? 'expression tag' -9 52 3 9YA9 THR C 17 ? UNP Q96SW2 ? ? 'expression tag' -8 53 3 9YA9 GLY C 18 ? UNP Q96SW2 ? ? 'expression tag' -7 54 3 9YA9 LEU C 19 ? UNP Q96SW2 ? ? 'expression tag' -6 55 3 9YA9 VAL C 20 ? UNP Q96SW2 ? ? 'expression tag' -5 56 3 9YA9 PRO C 21 ? UNP Q96SW2 ? ? 'expression tag' -4 57 3 9YA9 ARG C 22 ? UNP Q96SW2 ? ? 'expression tag' -3 58 3 9YA9 GLY C 23 ? UNP Q96SW2 ? ? 'expression tag' -2 59 3 9YA9 SER C 24 ? UNP Q96SW2 ? ? 'expression tag' -1 60 3 9YA9 MET C 25 ? UNP Q96SW2 ? ? 'expression tag' 0 61 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ARG A 27 ? SER A 41 ? ARG A 13 SER A 27 1 ? 15 HELX_P HELX_P2 AA2 HIS A 60 ? SER A 68 ? HIS A 46 SER A 54 1 ? 9 HELX_P HELX_P3 AA3 SER A 68 ? ASP A 77 ? SER A 54 ASP A 63 1 ? 10 HELX_P HELX_P4 AA4 ASP A 77 ? ASN A 82 ? ASP A 63 ASN A 68 1 ? 6 HELX_P HELX_P5 AA5 ASN A 93 ? SER A 107 ? ASN A 79 SER A 93 1 ? 15 HELX_P HELX_P6 AA6 ARG A 112 ? GLN A 127 ? ARG A 98 GLN A 113 1 ? 16 HELX_P HELX_P7 AA7 MET A 128 ? LYS A 137 ? MET A 114 LYS A 123 1 ? 10 HELX_P HELX_P8 AA8 ARG B 27 ? ASP B 43 ? ARG B 13 ASP B 29 1 ? 17 HELX_P HELX_P9 AA9 HIS B 60 ? CYS B 67 ? HIS B 46 CYS B 53 1 ? 8 HELX_P HELX_P10 AB1 SER B 68 ? ASP B 77 ? SER B 54 ASP B 63 1 ? 10 HELX_P HELX_P11 AB2 ASP B 77 ? ASN B 82 ? ASP B 63 ASN B 68 1 ? 6 HELX_P HELX_P12 AB3 ASN B 93 ? SER B 107 ? ASN B 79 SER B 93 1 ? 15 HELX_P HELX_P13 AB4 ASN B 115 ? GLN B 127 ? ASN B 101 GLN B 113 1 ? 13 HELX_P HELX_P14 AB5 MET B 128 ? ALA B 141 ? MET B 114 ALA B 127 1 ? 14 HELX_P HELX_P15 AB6 HIS C 128 ? ILE C 139 ? HIS C 103 ILE C 114 1 ? 12 HELX_P HELX_P16 AB7 GLN C 173 ? ILE C 177 ? GLN C 148 ILE C 152 5 ? 5 HELX_P HELX_P17 AB8 TYR C 246 ? PHE C 257 ? TYR C 221 PHE C 232 1 ? 12 HELX_P HELX_P18 AB9 HIS C 258 ? THR C 263 ? HIS C 233 THR C 238 5 ? 6 HELX_P HELX_P19 AC1 PRO C 266 ? LEU C 272 ? PRO C 241 LEU C 247 1 ? 7 HELX_P HELX_P20 AC2 ASP C 274 ? ARG C 287 ? ASP C 249 ARG C 262 1 ? 14 HELX_P HELX_P21 AC3 LYS C 294 ? LEU C 298 ? LYS C 269 LEU C 273 5 ? 5 HELX_P HELX_P22 AC4 ASN C 301 ? ALA C 311 ? ASN C 276 ALA C 286 1 ? 11 HELX_P HELX_P23 AC5 ASP C 316 ? ILE C 326 ? ASP C 291 ILE C 301 1 ? 11 HELX_P HELX_P24 AC6 SER C 328 ? CYS C 343 ? SER C 303 CYS C 318 1 ? 16 HELX_P HELX_P25 AC7 ASN C 360 ? ILE C 362 ? ASN C 335 ILE C 337 5 ? 3 HELX_P HELX_P26 AC8 SER C 445 ? LEU C 447 ? SER C 420 LEU C 422 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? C CYS 348 SG ? ? ? 1_555 E ZN . ZN ? ? C CYS 323 C ZN 502 1_555 ? ? ? ? ? ? ? 2.324 ? ? metalc2 metalc ? ? C CYS 351 SG ? ? ? 1_555 E ZN . ZN ? ? C CYS 326 C ZN 502 1_555 ? ? ? ? ? ? ? 2.318 ? ? metalc3 metalc ? ? C CYS 416 SG ? ? ? 1_555 E ZN . ZN ? ? C CYS 391 C ZN 502 1_555 ? ? ? ? ? ? ? 2.333 ? ? metalc4 metalc ? ? C CYS 419 SG ? ? ? 1_555 E ZN . ZN ? ? C CYS 394 C ZN 502 1_555 ? ? ? ? ? ? ? 2.320 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? C CYS 348 ? C CYS 323 ? 1_555 ZN ? E ZN . ? C ZN 502 ? 1_555 SG ? C CYS 351 ? C CYS 326 ? 1_555 107.4 ? 2 SG ? C CYS 348 ? C CYS 323 ? 1_555 ZN ? E ZN . ? C ZN 502 ? 1_555 SG ? C CYS 416 ? C CYS 391 ? 1_555 107.1 ? 3 SG ? C CYS 351 ? C CYS 326 ? 1_555 ZN ? E ZN . ? C ZN 502 ? 1_555 SG ? C CYS 416 ? C CYS 391 ? 1_555 118.0 ? 4 SG ? C CYS 348 ? C CYS 323 ? 1_555 ZN ? E ZN . ? C ZN 502 ? 1_555 SG ? C CYS 419 ? C CYS 394 ? 1_555 117.1 ? 5 SG ? C CYS 351 ? C CYS 326 ? 1_555 ZN ? E ZN . ? C ZN 502 ? 1_555 SG ? C CYS 419 ? C CYS 394 ? 1_555 91.9 ? 6 SG ? C CYS 416 ? C CYS 391 ? 1_555 ZN ? E ZN . ? C ZN 502 ? 1_555 SG ? C CYS 419 ? C CYS 394 ? 1_555 115.0 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 3 ? AA3 ? 3 ? AA4 ? 7 ? AA5 ? 4 ? AA6 ? 3 ? AA7 ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? parallel AA3 1 2 ? anti-parallel AA3 2 3 ? parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? parallel AA4 4 5 ? anti-parallel AA4 5 6 ? anti-parallel AA4 6 7 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA7 1 2 ? anti-parallel AA7 2 3 ? anti-parallel AA7 3 4 ? anti-parallel AA7 4 5 ? anti-parallel AA7 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE A 23 ? GLN A 24 ? ILE A 9 GLN A 10 AA1 2 ARG B 108 ? LEU B 109 ? ARG B 94 LEU B 95 AA2 1 GLU A 55 ? ALA A 59 ? GLU A 41 ALA A 45 AA2 2 VAL A 48 ? VAL A 52 ? VAL A 34 VAL A 38 AA2 3 VAL A 85 ? ASN A 87 ? VAL A 71 ASN A 73 AA3 1 GLU B 55 ? ALA B 59 ? GLU B 41 ALA B 45 AA3 2 VAL B 48 ? VAL B 52 ? VAL B 34 VAL B 38 AA3 3 VAL B 85 ? ASN B 87 ? VAL B 71 ASN B 73 AA4 1 GLU C 90 ? GLU C 91 ? GLU C 65 GLU C 66 AA4 2 ALA C 158 ? GLU C 172 ? ALA C 133 GLU C 147 AA4 3 THR C 144 ? TYR C 150 ? THR C 119 TYR C 125 AA4 4 CYS C 103 ? VAL C 108 ? CYS C 78 VAL C 83 AA4 5 GLN C 203 ? ILE C 209 ? GLN C 178 ILE C 184 AA4 6 ILE C 179 ? THR C 197 ? ILE C 154 THR C 172 AA4 7 THR C 121 ? LEU C 126 ? THR C 96 LEU C 101 AA5 1 GLU C 90 ? GLU C 91 ? GLU C 65 GLU C 66 AA5 2 ALA C 158 ? GLU C 172 ? ALA C 133 GLU C 147 AA5 3 ILE C 179 ? THR C 197 ? ILE C 154 THR C 172 AA5 4 THR C 121 ? LEU C 126 ? THR C 96 LEU C 101 AA6 1 GLU C 355 ? THR C 358 ? GLU C 330 THR C 333 AA6 2 SER C 345 ? CYS C 347 ? SER C 320 CYS C 322 AA6 3 LEU C 448 ? THR C 450 ? LEU C 423 THR C 425 AA7 1 MET C 371 ? ASN C 376 ? MET C 346 ASN C 351 AA7 2 TYR C 380 ? VAL C 387 ? TYR C 355 VAL C 362 AA7 3 LYS C 438 ? THR C 443 ? LYS C 413 THR C 418 AA7 4 HIS C 422 ? ALA C 429 ? HIS C 397 ALA C 404 AA7 5 TYR C 409 ? CYS C 416 ? TYR C 384 CYS C 391 AA7 6 LEU C 393 ? SER C 400 ? LEU C 368 SER C 375 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ILE A 23 ? N ILE A 9 O LEU B 109 ? O LEU B 95 AA2 1 2 O ALA A 59 ? O ALA A 45 N VAL A 48 ? N VAL A 34 AA2 2 3 N VAL A 51 ? N VAL A 37 O ILE A 86 ? O ILE A 72 AA3 1 2 O ALA B 59 ? O ALA B 45 N VAL B 48 ? N VAL B 34 AA3 2 3 N VAL B 49 ? N VAL B 35 O ILE B 86 ? O ILE B 72 AA4 1 2 N GLU C 90 ? N GLU C 65 O TYR C 169 ? O TYR C 144 AA4 2 3 O ALA C 164 ? O ALA C 139 N PHE C 145 ? N PHE C 120 AA4 3 4 O ALA C 146 ? O ALA C 121 N PRO C 107 ? N PRO C 82 AA4 4 5 N ILE C 106 ? N ILE C 81 O ALA C 205 ? O ALA C 180 AA4 5 6 O GLN C 204 ? O GLN C 179 N ARG C 196 ? N ARG C 171 AA4 6 7 O VAL C 182 ? O VAL C 157 N LEU C 124 ? N LEU C 99 AA5 1 2 N GLU C 90 ? N GLU C 65 O TYR C 169 ? O TYR C 144 AA5 2 3 N ARG C 170 ? N ARG C 145 O LYS C 181 ? O LYS C 156 AA5 3 4 O VAL C 182 ? O VAL C 157 N LEU C 124 ? N LEU C 99 AA6 1 2 O ILE C 356 ? O ILE C 331 N LEU C 346 ? N LEU C 321 AA6 2 3 N CYS C 347 ? N CYS C 322 O LEU C 448 ? O LEU C 423 AA7 1 2 N ALA C 372 ? N ALA C 347 O THR C 384 ? O THR C 359 AA7 2 3 N LEU C 385 ? N LEU C 360 O LEU C 442 ? O LEU C 417 AA7 3 4 O PHE C 439 ? O PHE C 414 N PHE C 427 ? N PHE C 402 AA7 4 5 O ILE C 423 ? O ILE C 398 N ALA C 414 ? N ALA C 389 AA7 5 6 O GLN C 415 ? O GLN C 390 N ASN C 394 ? N ASN C 369 # _pdbx_entry_details.entry_id 9YA9 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 40 ? ? 74.46 -6.59 2 1 ILE A 78 ? ? -37.56 121.64 3 1 THR B 32 ? ? -69.80 98.88 4 1 ARG B 40 ? ? 74.85 -5.12 5 1 LYS C 116 ? ? -106.68 -67.08 6 1 GLN C 327 ? ? 71.48 -1.48 7 1 PRO C 352 ? ? -63.02 0.11 8 1 MET C 409 ? ? -161.54 116.51 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9YA9 _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space REAL _em_3d_fitting.ref_protocol 'RIGID BODY FIT' # _em_3d_fitting_list.id 1 _em_3d_fitting_list.3d_fitting_id 1 _em_3d_fitting_list.pdb_entry_id pdb_00009q03 _em_3d_fitting_list.pdb_chain_id ? _em_3d_fitting_list.pdb_chain_residue_range ? _em_3d_fitting_list.details ? _em_3d_fitting_list.chain_id ? _em_3d_fitting_list.chain_residue_range ? _em_3d_fitting_list.source_name PDB _em_3d_fitting_list.type 'experimental model' _em_3d_fitting_list.accession_code pdb_00009q03 _em_3d_fitting_list.initial_refinement_model_id 1 # _em_3d_reconstruction.entry_id 9YA9 _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm 'FOURIER SPACE' _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.09 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 202942 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages 2 _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.0 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source 'MULTIPLE SOURCES' _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'ternary complex of BCL6-CRBN-DDB1 with an LDD BMS-986458' _em_entity_assembly.details 'BCL6 BTB domain and CRBN/DDB1 was mixed with BMS-986458 in 1:1:2 ratio' _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1,2 # _em_imaging.entry_id 9YA9 _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER' _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 2.7 _em_imaging.nominal_defocus_min 1300 _em_imaging.nominal_defocus_max 1900 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification 130000 _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure 'COMA FREE' _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen NITROGEN _em_imaging.objective_aperture ? _em_imaging.microscope_serial_number ? _em_imaging.microscope_version ? # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material GOLD _em_sample_support.grid_mesh_size 300 _em_sample_support.grid_type 'Quantifoil R1.2/1.3' _em_sample_support.details ? _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 9YA9 _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity 100 _em_vitrification.temp ? _em_vitrification.chamber_temperature 278 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 9YA9 _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 9YA9 _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry C1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -13 ? A GLY 1 2 1 Y 1 A SER -12 ? A SER 2 3 1 Y 1 A LEU -11 ? A LEU 3 4 1 Y 1 A ASP -10 ? A ASP 4 5 1 Y 1 A TYR -9 ? A TYR 5 6 1 Y 1 A LYS -8 ? A LYS 6 7 1 Y 1 A ASP -7 ? A ASP 7 8 1 Y 1 A ASP -6 ? A ASP 8 9 1 Y 1 A ASP -5 ? A ASP 9 10 1 Y 1 A ASP -4 ? A ASP 10 11 1 Y 1 A LYS -3 ? A LYS 11 12 1 Y 1 A GLU -2 ? A GLU 12 13 1 Y 1 A ASN -1 ? A ASN 13 14 1 Y 1 A LEU 0 ? A LEU 14 15 1 Y 1 A TYR 1 ? A TYR 15 16 1 Y 1 A PHE 2 ? A PHE 16 17 1 Y 1 A GLN 3 ? A GLN 17 18 1 Y 1 A GLY 4 ? A GLY 18 19 1 Y 1 A ALA 5 ? A ALA 19 20 1 Y 1 A ASP 6 ? A ASP 20 21 1 Y 1 A SER 7 ? A SER 21 22 1 Y 1 A PHE 124 ? A PHE 138 23 1 Y 1 A ILE 125 ? A ILE 139 24 1 Y 1 A LYS 126 ? A LYS 140 25 1 Y 1 A ALA 127 ? A ALA 141 26 1 Y 1 A SER 128 ? A SER 142 27 1 Y 1 A GLU 129 ? A GLU 143 28 1 Y 1 B GLY -13 ? B GLY 1 29 1 Y 1 B SER -12 ? B SER 2 30 1 Y 1 B LEU -11 ? B LEU 3 31 1 Y 1 B ASP -10 ? B ASP 4 32 1 Y 1 B TYR -9 ? B TYR 5 33 1 Y 1 B LYS -8 ? B LYS 6 34 1 Y 1 B ASP -7 ? B ASP 7 35 1 Y 1 B ASP -6 ? B ASP 8 36 1 Y 1 B ASP -5 ? B ASP 9 37 1 Y 1 B ASP -4 ? B ASP 10 38 1 Y 1 B LYS -3 ? B LYS 11 39 1 Y 1 B GLU -2 ? B GLU 12 40 1 Y 1 B ASN -1 ? B ASN 13 41 1 Y 1 B LEU 0 ? B LEU 14 42 1 Y 1 B TYR 1 ? B TYR 15 43 1 Y 1 B PHE 2 ? B PHE 16 44 1 Y 1 B GLN 3 ? B GLN 17 45 1 Y 1 B GLY 4 ? B GLY 18 46 1 Y 1 B ALA 5 ? B ALA 19 47 1 Y 1 B ASP 6 ? B ASP 20 48 1 Y 1 B SER 7 ? B SER 21 49 1 Y 1 B CYS 8 ? B CYS 22 50 1 Y 1 C MET -24 ? C MET 1 51 1 Y 1 C SER -23 ? C SER 2 52 1 Y 1 C TYR -22 ? C TYR 3 53 1 Y 1 C TYR -21 ? C TYR 4 54 1 Y 1 C HIS -20 ? C HIS 5 55 1 Y 1 C HIS -19 ? C HIS 6 56 1 Y 1 C HIS -18 ? C HIS 7 57 1 Y 1 C HIS -17 ? C HIS 8 58 1 Y 1 C HIS -16 ? C HIS 9 59 1 Y 1 C HIS -15 ? C HIS 10 60 1 Y 1 C ASP -14 ? C ASP 11 61 1 Y 1 C TYR -13 ? C TYR 12 62 1 Y 1 C ASP -12 ? C ASP 13 63 1 Y 1 C ILE -11 ? C ILE 14 64 1 Y 1 C PRO -10 ? C PRO 15 65 1 Y 1 C THR -9 ? C THR 16 66 1 Y 1 C THR -8 ? C THR 17 67 1 Y 1 C GLY -7 ? C GLY 18 68 1 Y 1 C LEU -6 ? C LEU 19 69 1 Y 1 C VAL -5 ? C VAL 20 70 1 Y 1 C PRO -4 ? C PRO 21 71 1 Y 1 C ARG -3 ? C ARG 22 72 1 Y 1 C GLY -2 ? C GLY 23 73 1 Y 1 C SER -1 ? C SER 24 74 1 Y 1 C MET 0 ? C MET 25 75 1 Y 1 C MET 1 ? C MET 26 76 1 Y 1 C ALA 2 ? C ALA 27 77 1 Y 1 C GLY 3 ? C GLY 28 78 1 Y 1 C GLU 4 ? C GLU 29 79 1 Y 1 C GLY 5 ? C GLY 30 80 1 Y 1 C ASP 6 ? C ASP 31 81 1 Y 1 C GLN 7 ? C GLN 32 82 1 Y 1 C GLN 8 ? C GLN 33 83 1 Y 1 C ASP 9 ? C ASP 34 84 1 Y 1 C ALA 10 ? C ALA 35 85 1 Y 1 C ALA 11 ? C ALA 36 86 1 Y 1 C HIS 12 ? C HIS 37 87 1 Y 1 C ASN 13 ? C ASN 38 88 1 Y 1 C MET 14 ? C MET 39 89 1 Y 1 C GLY 15 ? C GLY 40 90 1 Y 1 C ASN 16 ? C ASN 41 91 1 Y 1 C HIS 17 ? C HIS 42 92 1 Y 1 C LEU 18 ? C LEU 43 93 1 Y 1 C PRO 19 ? C PRO 44 94 1 Y 1 C LEU 20 ? C LEU 45 95 1 Y 1 C LEU 21 ? C LEU 46 96 1 Y 1 C PRO 22 ? C PRO 47 97 1 Y 1 C ALA 23 ? C ALA 48 98 1 Y 1 C GLU 24 ? C GLU 49 99 1 Y 1 C SER 25 ? C SER 50 100 1 Y 1 C GLU 26 ? C GLU 51 101 1 Y 1 C GLU 27 ? C GLU 52 102 1 Y 1 C GLU 28 ? C GLU 53 103 1 Y 1 C ASP 29 ? C ASP 54 104 1 Y 1 C GLU 30 ? C GLU 55 105 1 Y 1 C MET 31 ? C MET 56 106 1 Y 1 C GLU 32 ? C GLU 57 107 1 Y 1 C VAL 33 ? C VAL 58 108 1 Y 1 C GLU 34 ? C GLU 59 109 1 Y 1 C ASP 35 ? C ASP 60 110 1 Y 1 C GLN 36 ? C GLN 61 111 1 Y 1 C ASP 37 ? C ASP 62 112 1 Y 1 C SER 38 ? C SER 63 113 1 Y 1 C LYS 39 ? C LYS 64 114 1 Y 1 C GLU 40 ? C GLU 65 115 1 Y 1 C ALA 41 ? C ALA 66 116 1 Y 1 C LYS 42 ? C LYS 67 117 1 Y 1 C LYS 43 ? C LYS 68 118 1 Y 1 C PRO 44 ? C PRO 69 119 1 Y 1 C ASN 45 ? C ASN 70 120 1 Y 1 C ILE 46 ? C ILE 71 121 1 Y 1 C ILE 47 ? C ILE 72 122 1 Y 1 C ASN 48 ? C ASN 73 123 1 Y 1 C PHE 49 ? C PHE 74 124 1 Y 1 C ASP 50 ? C ASP 75 125 1 Y 1 C THR 51 ? C THR 76 126 1 Y 1 C SER 52 ? C SER 77 127 1 Y 1 C LEU 53 ? C LEU 78 128 1 Y 1 C PRO 54 ? C PRO 79 129 1 Y 1 C THR 55 ? C THR 80 130 1 Y 1 C SER 56 ? C SER 81 131 1 Y 1 C HIS 57 ? C HIS 82 132 1 Y 1 C THR 58 ? C THR 83 133 1 Y 1 C TYR 59 ? C TYR 84 134 1 Y 1 C LEU 60 ? C LEU 85 135 1 Y 1 C GLY 61 ? C GLY 86 136 1 Y 1 C CYS 188 ? C CYS 213 137 1 Y 1 C VAL 189 ? C VAL 214 138 1 Y 1 C LEU 190 ? C LEU 215 139 1 Y 1 C PRO 191 ? C PRO 216 140 1 Y 1 C SER 192 ? C SER 217 141 1 Y 1 C THR 193 ? C THR 218 142 1 Y 1 C MET 194 ? C MET 219 143 1 Y 1 C SER 195 ? C SER 220 144 1 Y 1 C ALA 196 ? C ALA 221 145 1 Y 1 C VAL 197 ? C VAL 222 146 1 Y 1 C GLN 198 ? C GLN 223 147 1 Y 1 C LEU 199 ? C LEU 224 148 1 Y 1 C GLU 200 ? C GLU 225 149 1 Y 1 C SER 201 ? C SER 226 150 1 Y 1 C LEU 202 ? C LEU 227 151 1 Y 1 C ASN 203 ? C ASN 228 152 1 Y 1 C LYS 204 ? C LYS 229 153 1 Y 1 C CYS 205 ? C CYS 230 154 1 Y 1 C GLN 206 ? C GLN 231 155 1 Y 1 C ILE 207 ? C ILE 232 156 1 Y 1 C PHE 208 ? C PHE 233 157 1 Y 1 C PRO 209 ? C PRO 234 158 1 Y 1 C SER 210 ? C SER 235 159 1 Y 1 C LYS 211 ? C LYS 236 160 1 Y 1 C PRO 212 ? C PRO 237 161 1 Y 1 C VAL 213 ? C VAL 238 162 1 Y 1 C SER 214 ? C SER 239 163 1 Y 1 C ARG 215 ? C ARG 240 164 1 Y 1 C GLU 216 ? C GLU 241 165 1 Y 1 C ASP 217 ? C ASP 242 166 1 Y 1 C GLN 218 ? C GLN 243 167 1 Y 1 C CYS 219 ? C CYS 244 168 1 Y 1 C PRO 427 ? C PRO 452 169 1 Y 1 C ASP 428 ? C ASP 453 170 1 Y 1 C THR 429 ? C THR 454 171 1 Y 1 C GLU 430 ? C GLU 455 172 1 Y 1 C ASP 431 ? C ASP 456 173 1 Y 1 C GLU 432 ? C GLU 457 174 1 Y 1 C ILE 433 ? C ILE 458 175 1 Y 1 C SER 434 ? C SER 459 176 1 Y 1 C PRO 435 ? C PRO 460 177 1 Y 1 C ASP 436 ? C ASP 461 178 1 Y 1 C LYS 437 ? C LYS 462 179 1 Y 1 C VAL 438 ? C VAL 463 180 1 Y 1 C ILE 439 ? C ILE 464 181 1 Y 1 C LEU 440 ? C LEU 465 182 1 Y 1 C CYS 441 ? C CYS 466 183 1 Y 1 C LEU 442 ? C LEU 467 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A1CTU N1 N Y N 1 A1CTU N3 N Y N 2 A1CTU C4 C Y N 3 A1CTU C5 C Y N 4 A1CTU C6 C Y N 5 A1CTU C7 C Y N 6 A1CTU C8 C Y N 7 A1CTU C10 C Y N 8 A1CTU C13 C Y N 9 A1CTU C15 C Y N 10 A1CTU C17 C Y N 11 A1CTU C20 C N N 12 A1CTU C21 C N N 13 A1CTU C22 C N N 14 A1CTU C24 C N N 15 A1CTU C26 C N N 16 A1CTU C28 C N R 17 A1CTU C1 C Y N 18 A1CTU C11 C Y N 19 A1CTU C12 C Y N 20 A1CTU C14 C Y N 21 A1CTU C16 C Y N 22 A1CTU C18 C N N 23 A1CTU C19 C N N 24 A1CTU C2 C Y N 25 A1CTU C23 C N N 26 A1CTU C25 C N N 27 A1CTU C27 C N R 28 A1CTU C29 C N R 29 A1CTU C3 C Y N 30 A1CTU C30 C N N 31 A1CTU C31 C N N 32 A1CTU C32 C N N 33 A1CTU C9 C Y N 34 A1CTU N2 N Y N 35 A1CTU N4 N Y N 36 A1CTU N5 N N N 37 A1CTU N6 N N N 38 A1CTU N7 N N N 39 A1CTU N8 N N N 40 A1CTU N9 N N N 41 A1CTU O1 O N N 42 A1CTU O2 O N N 43 A1CTU O3 O N N 44 A1CTU CL1 CL N N 45 A1CTU H4 H N N 46 A1CTU H5 H N N 47 A1CTU H6 H N N 48 A1CTU H7 H N N 49 A1CTU H9 H N N 50 A1CTU H8 H N N 51 A1CTU H10 H N N 52 A1CTU H11 H N N 53 A1CTU H15 H N N 54 A1CTU H14 H N N 55 A1CTU H18 H N N 56 A1CTU H19 H N N 57 A1CTU H21 H N N 58 A1CTU H1 H N N 59 A1CTU H2 H N N 60 A1CTU H13 H N N 61 A1CTU H12 H N N 62 A1CTU H16 H N N 63 A1CTU H17 H N N 64 A1CTU H20 H N N 65 A1CTU H22 H N N 66 A1CTU H3 H N N 67 A1CTU H23 H N N 68 A1CTU H24 H N N 69 A1CTU H25 H N N 70 A1CTU H26 H N N 71 A1CTU H28 H N N 72 A1CTU H27 H N N 73 A1CTU H30 H N N 74 A1CTU H29 H N N 75 A1CTU H31 H N N 76 A1CTU H32 H N N 77 A1CTU H33 H N N 78 A1CTU H34 H N N 79 ALA N N N N 80 ALA CA C N S 81 ALA C C N N 82 ALA O O N N 83 ALA CB C N N 84 ALA OXT O N N 85 ALA H H N N 86 ALA H2 H N N 87 ALA HA H N N 88 ALA HB1 H N N 89 ALA HB2 H N N 90 ALA HB3 H N N 91 ALA HXT H N N 92 ARG N N N N 93 ARG CA C N S 94 ARG C C N N 95 ARG O O N N 96 ARG CB C N N 97 ARG CG C N N 98 ARG CD C N N 99 ARG NE N N N 100 ARG CZ C N N 101 ARG NH1 N N N 102 ARG NH2 N N N 103 ARG OXT O N N 104 ARG H H N N 105 ARG H2 H N N 106 ARG HA H N N 107 ARG HB2 H N N 108 ARG HB3 H N N 109 ARG HG2 H N N 110 ARG HG3 H N N 111 ARG HD2 H N N 112 ARG HD3 H N N 113 ARG HE H N N 114 ARG HH11 H N N 115 ARG HH12 H N N 116 ARG HH21 H N N 117 ARG HH22 H N N 118 ARG HXT H N N 119 ASN N N N N 120 ASN CA C N S 121 ASN C C N N 122 ASN O O N N 123 ASN CB C N N 124 ASN CG C N N 125 ASN OD1 O N N 126 ASN ND2 N N N 127 ASN OXT O N N 128 ASN H H N N 129 ASN H2 H N N 130 ASN HA H N N 131 ASN HB2 H N N 132 ASN HB3 H N N 133 ASN HD21 H N N 134 ASN HD22 H N N 135 ASN HXT H N N 136 ASP N N N N 137 ASP CA C N S 138 ASP C C N N 139 ASP O O N N 140 ASP CB C N N 141 ASP CG C N N 142 ASP OD1 O N N 143 ASP OD2 O N N 144 ASP OXT O N N 145 ASP H H N N 146 ASP H2 H N N 147 ASP HA H N N 148 ASP HB2 H N N 149 ASP HB3 H N N 150 ASP HD2 H N N 151 ASP HXT H N N 152 CYS N N N N 153 CYS CA C N R 154 CYS C C N N 155 CYS O O N N 156 CYS CB C N N 157 CYS SG S N N 158 CYS OXT O N N 159 CYS H H N N 160 CYS H2 H N N 161 CYS HA H N N 162 CYS HB2 H N N 163 CYS HB3 H N N 164 CYS HG H N N 165 CYS HXT H N N 166 GLN N N N N 167 GLN CA C N S 168 GLN C C N N 169 GLN O O N N 170 GLN CB C N N 171 GLN CG C N N 172 GLN CD C N N 173 GLN OE1 O N N 174 GLN NE2 N N N 175 GLN OXT O N N 176 GLN H H N N 177 GLN H2 H N N 178 GLN HA H N N 179 GLN HB2 H N N 180 GLN HB3 H N N 181 GLN HG2 H N N 182 GLN HG3 H N N 183 GLN HE21 H N N 184 GLN HE22 H N N 185 GLN HXT H N N 186 GLU N N N N 187 GLU CA C N S 188 GLU C C N N 189 GLU O O N N 190 GLU CB C N N 191 GLU CG C N N 192 GLU CD C N N 193 GLU OE1 O N N 194 GLU OE2 O N N 195 GLU OXT O N N 196 GLU H H N N 197 GLU H2 H N N 198 GLU HA H N N 199 GLU HB2 H N N 200 GLU HB3 H N N 201 GLU HG2 H N N 202 GLU HG3 H N N 203 GLU HE2 H N N 204 GLU HXT H N N 205 GLY N N N N 206 GLY CA C N N 207 GLY C C N N 208 GLY O O N N 209 GLY OXT O N N 210 GLY H H N N 211 GLY H2 H N N 212 GLY HA2 H N N 213 GLY HA3 H N N 214 GLY HXT H N N 215 HIS N N N N 216 HIS CA C N S 217 HIS C C N N 218 HIS O O N N 219 HIS CB C N N 220 HIS CG C Y N 221 HIS ND1 N Y N 222 HIS CD2 C Y N 223 HIS CE1 C Y N 224 HIS NE2 N Y N 225 HIS OXT O N N 226 HIS H H N N 227 HIS H2 H N N 228 HIS HA H N N 229 HIS HB2 H N N 230 HIS HB3 H N N 231 HIS HD1 H N N 232 HIS HD2 H N N 233 HIS HE1 H N N 234 HIS HE2 H N N 235 HIS HXT H N N 236 ILE N N N N 237 ILE CA C N S 238 ILE C C N N 239 ILE O O N N 240 ILE CB C N S 241 ILE CG1 C N N 242 ILE CG2 C N N 243 ILE CD1 C N N 244 ILE OXT O N N 245 ILE H H N N 246 ILE H2 H N N 247 ILE HA H N N 248 ILE HB H N N 249 ILE HG12 H N N 250 ILE HG13 H N N 251 ILE HG21 H N N 252 ILE HG22 H N N 253 ILE HG23 H N N 254 ILE HD11 H N N 255 ILE HD12 H N N 256 ILE HD13 H N N 257 ILE HXT H N N 258 LEU N N N N 259 LEU CA C N S 260 LEU C C N N 261 LEU O O N N 262 LEU CB C N N 263 LEU CG C N N 264 LEU CD1 C N N 265 LEU CD2 C N N 266 LEU OXT O N N 267 LEU H H N N 268 LEU H2 H N N 269 LEU HA H N N 270 LEU HB2 H N N 271 LEU HB3 H N N 272 LEU HG H N N 273 LEU HD11 H N N 274 LEU HD12 H N N 275 LEU HD13 H N N 276 LEU HD21 H N N 277 LEU HD22 H N N 278 LEU HD23 H N N 279 LEU HXT H N N 280 LYS N N N N 281 LYS CA C N S 282 LYS C C N N 283 LYS O O N N 284 LYS CB C N N 285 LYS CG C N N 286 LYS CD C N N 287 LYS CE C N N 288 LYS NZ N N N 289 LYS OXT O N N 290 LYS H H N N 291 LYS H2 H N N 292 LYS HA H N N 293 LYS HB2 H N N 294 LYS HB3 H N N 295 LYS HG2 H N N 296 LYS HG3 H N N 297 LYS HD2 H N N 298 LYS HD3 H N N 299 LYS HE2 H N N 300 LYS HE3 H N N 301 LYS HZ1 H N N 302 LYS HZ2 H N N 303 LYS HZ3 H N N 304 LYS HXT H N N 305 MET N N N N 306 MET CA C N S 307 MET C C N N 308 MET O O N N 309 MET CB C N N 310 MET CG C N N 311 MET SD S N N 312 MET CE C N N 313 MET OXT O N N 314 MET H H N N 315 MET H2 H N N 316 MET HA H N N 317 MET HB2 H N N 318 MET HB3 H N N 319 MET HG2 H N N 320 MET HG3 H N N 321 MET HE1 H N N 322 MET HE2 H N N 323 MET HE3 H N N 324 MET HXT H N N 325 PHE N N N N 326 PHE CA C N S 327 PHE C C N N 328 PHE O O N N 329 PHE CB C N N 330 PHE CG C Y N 331 PHE CD1 C Y N 332 PHE CD2 C Y N 333 PHE CE1 C Y N 334 PHE CE2 C Y N 335 PHE CZ C Y N 336 PHE OXT O N N 337 PHE H H N N 338 PHE H2 H N N 339 PHE HA H N N 340 PHE HB2 H N N 341 PHE HB3 H N N 342 PHE HD1 H N N 343 PHE HD2 H N N 344 PHE HE1 H N N 345 PHE HE2 H N N 346 PHE HZ H N N 347 PHE HXT H N N 348 PRO N N N N 349 PRO CA C N S 350 PRO C C N N 351 PRO O O N N 352 PRO CB C N N 353 PRO CG C N N 354 PRO CD C N N 355 PRO OXT O N N 356 PRO H H N N 357 PRO HA H N N 358 PRO HB2 H N N 359 PRO HB3 H N N 360 PRO HG2 H N N 361 PRO HG3 H N N 362 PRO HD2 H N N 363 PRO HD3 H N N 364 PRO HXT H N N 365 SER N N N N 366 SER CA C N S 367 SER C C N N 368 SER O O N N 369 SER CB C N N 370 SER OG O N N 371 SER OXT O N N 372 SER H H N N 373 SER H2 H N N 374 SER HA H N N 375 SER HB2 H N N 376 SER HB3 H N N 377 SER HG H N N 378 SER HXT H N N 379 THR N N N N 380 THR CA C N S 381 THR C C N N 382 THR O O N N 383 THR CB C N R 384 THR OG1 O N N 385 THR CG2 C N N 386 THR OXT O N N 387 THR H H N N 388 THR H2 H N N 389 THR HA H N N 390 THR HB H N N 391 THR HG1 H N N 392 THR HG21 H N N 393 THR HG22 H N N 394 THR HG23 H N N 395 THR HXT H N N 396 TRP N N N N 397 TRP CA C N S 398 TRP C C N N 399 TRP O O N N 400 TRP CB C N N 401 TRP CG C Y N 402 TRP CD1 C Y N 403 TRP CD2 C Y N 404 TRP NE1 N Y N 405 TRP CE2 C Y N 406 TRP CE3 C Y N 407 TRP CZ2 C Y N 408 TRP CZ3 C Y N 409 TRP CH2 C Y N 410 TRP OXT O N N 411 TRP H H N N 412 TRP H2 H N N 413 TRP HA H N N 414 TRP HB2 H N N 415 TRP HB3 H N N 416 TRP HD1 H N N 417 TRP HE1 H N N 418 TRP HE3 H N N 419 TRP HZ2 H N N 420 TRP HZ3 H N N 421 TRP HH2 H N N 422 TRP HXT H N N 423 TYR N N N N 424 TYR CA C N S 425 TYR C C N N 426 TYR O O N N 427 TYR CB C N N 428 TYR CG C Y N 429 TYR CD1 C Y N 430 TYR CD2 C Y N 431 TYR CE1 C Y N 432 TYR CE2 C Y N 433 TYR CZ C Y N 434 TYR OH O N N 435 TYR OXT O N N 436 TYR H H N N 437 TYR H2 H N N 438 TYR HA H N N 439 TYR HB2 H N N 440 TYR HB3 H N N 441 TYR HD1 H N N 442 TYR HD2 H N N 443 TYR HE1 H N N 444 TYR HE2 H N N 445 TYR HH H N N 446 TYR HXT H N N 447 VAL N N N N 448 VAL CA C N S 449 VAL C C N N 450 VAL O O N N 451 VAL CB C N N 452 VAL CG1 C N N 453 VAL CG2 C N N 454 VAL OXT O N N 455 VAL H H N N 456 VAL H2 H N N 457 VAL HA H N N 458 VAL HB H N N 459 VAL HG11 H N N 460 VAL HG12 H N N 461 VAL HG13 H N N 462 VAL HG21 H N N 463 VAL HG22 H N N 464 VAL HG23 H N N 465 VAL HXT H N N 466 ZN ZN ZN N N 467 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1CTU CL1 C14 sing N N 1 A1CTU C21 C9 sing N N 2 A1CTU C21 C18 sing N N 3 A1CTU C5 C9 doub Y N 4 A1CTU C5 C12 sing Y N 5 A1CTU C9 C11 sing Y N 6 A1CTU N8 C12 sing N N 7 A1CTU N8 C16 sing N N 8 A1CTU O1 C18 doub N N 9 A1CTU C18 N6 sing N N 10 A1CTU C14 C16 doub Y N 11 A1CTU C14 C7 sing Y N 12 A1CTU C12 C4 doub Y N 13 A1CTU C16 N3 sing Y N 14 A1CTU C11 N6 sing N N 15 A1CTU C11 C2 doub Y N 16 A1CTU C7 N1 doub Y N 17 A1CTU N6 C32 sing N N 18 A1CTU C4 C2 sing Y N 19 A1CTU N3 C17 doub Y N 20 A1CTU N1 C17 sing Y N 21 A1CTU C17 N7 sing N N 22 A1CTU N7 C25 sing N N 23 A1CTU N7 C26 sing N N 24 A1CTU C25 C24 sing N N 25 A1CTU C26 C28 sing N N 26 A1CTU C24 C29 sing N N 27 A1CTU C28 C29 sing N N 28 A1CTU C28 C30 sing N N 29 A1CTU C29 N9 sing N N 30 A1CTU N9 C13 sing N N 31 A1CTU C13 C6 doub Y N 32 A1CTU C13 C3 sing Y N 33 A1CTU C6 C10 sing Y N 34 A1CTU C3 C1 doub Y N 35 A1CTU C10 C8 doub Y N 36 A1CTU C10 N4 sing Y N 37 A1CTU C1 C8 sing Y N 38 A1CTU C31 N4 sing N N 39 A1CTU C8 C15 sing Y N 40 A1CTU N4 N2 sing Y N 41 A1CTU C15 N2 doub Y N 42 A1CTU C15 C27 sing N N 43 A1CTU C23 C27 sing N N 44 A1CTU C23 C22 sing N N 45 A1CTU C27 C20 sing N N 46 A1CTU C20 N5 sing N N 47 A1CTU C20 O3 doub N N 48 A1CTU N5 C19 sing N N 49 A1CTU C22 C19 sing N N 50 A1CTU C19 O2 doub N N 51 A1CTU C4 H4 sing N N 52 A1CTU C5 H5 sing N N 53 A1CTU C6 H6 sing N N 54 A1CTU C7 H7 sing N N 55 A1CTU C21 H9 sing N N 56 A1CTU C21 H8 sing N N 57 A1CTU C22 H10 sing N N 58 A1CTU C22 H11 sing N N 59 A1CTU C24 H15 sing N N 60 A1CTU C24 H14 sing N N 61 A1CTU C26 H18 sing N N 62 A1CTU C26 H19 sing N N 63 A1CTU C28 H21 sing N N 64 A1CTU C1 H1 sing N N 65 A1CTU C2 H2 sing N N 66 A1CTU C23 H13 sing N N 67 A1CTU C23 H12 sing N N 68 A1CTU C25 H16 sing N N 69 A1CTU C25 H17 sing N N 70 A1CTU C27 H20 sing N N 71 A1CTU C29 H22 sing N N 72 A1CTU C3 H3 sing N N 73 A1CTU C30 H23 sing N N 74 A1CTU C30 H24 sing N N 75 A1CTU C30 H25 sing N N 76 A1CTU C31 H26 sing N N 77 A1CTU C31 H28 sing N N 78 A1CTU C31 H27 sing N N 79 A1CTU C32 H30 sing N N 80 A1CTU C32 H29 sing N N 81 A1CTU C32 H31 sing N N 82 A1CTU N5 H32 sing N N 83 A1CTU N8 H33 sing N N 84 A1CTU N9 H34 sing N N 85 ALA N CA sing N N 86 ALA N H sing N N 87 ALA N H2 sing N N 88 ALA CA C sing N N 89 ALA CA CB sing N N 90 ALA CA HA sing N N 91 ALA C O doub N N 92 ALA C OXT sing N N 93 ALA CB HB1 sing N N 94 ALA CB HB2 sing N N 95 ALA CB HB3 sing N N 96 ALA OXT HXT sing N N 97 ARG N CA sing N N 98 ARG N H sing N N 99 ARG N H2 sing N N 100 ARG CA C sing N N 101 ARG CA CB sing N N 102 ARG CA HA sing N N 103 ARG C O doub N N 104 ARG C OXT sing N N 105 ARG CB CG sing N N 106 ARG CB HB2 sing N N 107 ARG CB HB3 sing N N 108 ARG CG CD sing N N 109 ARG CG HG2 sing N N 110 ARG CG HG3 sing N N 111 ARG CD NE sing N N 112 ARG CD HD2 sing N N 113 ARG CD HD3 sing N N 114 ARG NE CZ sing N N 115 ARG NE HE sing N N 116 ARG CZ NH1 sing N N 117 ARG CZ NH2 doub N N 118 ARG NH1 HH11 sing N N 119 ARG NH1 HH12 sing N N 120 ARG NH2 HH21 sing N N 121 ARG NH2 HH22 sing N N 122 ARG OXT HXT sing N N 123 ASN N CA sing N N 124 ASN N H sing N N 125 ASN N H2 sing N N 126 ASN CA C sing N N 127 ASN CA CB sing N N 128 ASN CA HA sing N N 129 ASN C O doub N N 130 ASN C OXT sing N N 131 ASN CB CG sing N N 132 ASN CB HB2 sing N N 133 ASN CB HB3 sing N N 134 ASN CG OD1 doub N N 135 ASN CG ND2 sing N N 136 ASN ND2 HD21 sing N N 137 ASN ND2 HD22 sing N N 138 ASN OXT HXT sing N N 139 ASP N CA sing N N 140 ASP N H sing N N 141 ASP N H2 sing N N 142 ASP CA C sing N N 143 ASP CA CB sing N N 144 ASP CA HA sing N N 145 ASP C O doub N N 146 ASP C OXT sing N N 147 ASP CB CG sing N N 148 ASP CB HB2 sing N N 149 ASP CB HB3 sing N N 150 ASP CG OD1 doub N N 151 ASP CG OD2 sing N N 152 ASP OD2 HD2 sing N N 153 ASP OXT HXT sing N N 154 CYS N CA sing N N 155 CYS N H sing N N 156 CYS N H2 sing N N 157 CYS CA C sing N N 158 CYS CA CB sing N N 159 CYS CA HA sing N N 160 CYS C O doub N N 161 CYS C OXT sing N N 162 CYS CB SG sing N N 163 CYS CB HB2 sing N N 164 CYS CB HB3 sing N N 165 CYS SG HG sing N N 166 CYS OXT HXT sing N N 167 GLN N CA sing N N 168 GLN N H sing N N 169 GLN N H2 sing N N 170 GLN CA C sing N N 171 GLN CA CB sing N N 172 GLN CA HA sing N N 173 GLN C O doub N N 174 GLN C OXT sing N N 175 GLN CB CG sing N N 176 GLN CB HB2 sing N N 177 GLN CB HB3 sing N N 178 GLN CG CD sing N N 179 GLN CG HG2 sing N N 180 GLN CG HG3 sing N N 181 GLN CD OE1 doub N N 182 GLN CD NE2 sing N N 183 GLN NE2 HE21 sing N N 184 GLN NE2 HE22 sing N N 185 GLN OXT HXT sing N N 186 GLU N CA sing N N 187 GLU N H sing N N 188 GLU N H2 sing N N 189 GLU CA C sing N N 190 GLU CA CB sing N N 191 GLU CA HA sing N N 192 GLU C O doub N N 193 GLU C OXT sing N N 194 GLU CB CG sing N N 195 GLU CB HB2 sing N N 196 GLU CB HB3 sing N N 197 GLU CG CD sing N N 198 GLU CG HG2 sing N N 199 GLU CG HG3 sing N N 200 GLU CD OE1 doub N N 201 GLU CD OE2 sing N N 202 GLU OE2 HE2 sing N N 203 GLU OXT HXT sing N N 204 GLY N CA sing N N 205 GLY N H sing N N 206 GLY N H2 sing N N 207 GLY CA C sing N N 208 GLY CA HA2 sing N N 209 GLY CA HA3 sing N N 210 GLY C O doub N N 211 GLY C OXT sing N N 212 GLY OXT HXT sing N N 213 HIS N CA sing N N 214 HIS N H sing N N 215 HIS N H2 sing N N 216 HIS CA C sing N N 217 HIS CA CB sing N N 218 HIS CA HA sing N N 219 HIS C O doub N N 220 HIS C OXT sing N N 221 HIS CB CG sing N N 222 HIS CB HB2 sing N N 223 HIS CB HB3 sing N N 224 HIS CG ND1 sing Y N 225 HIS CG CD2 doub Y N 226 HIS ND1 CE1 doub Y N 227 HIS ND1 HD1 sing N N 228 HIS CD2 NE2 sing Y N 229 HIS CD2 HD2 sing N N 230 HIS CE1 NE2 sing Y N 231 HIS CE1 HE1 sing N N 232 HIS NE2 HE2 sing N N 233 HIS OXT HXT sing N N 234 ILE N CA sing N N 235 ILE N H sing N N 236 ILE N H2 sing N N 237 ILE CA C sing N N 238 ILE CA CB sing N N 239 ILE CA HA sing N N 240 ILE C O doub N N 241 ILE C OXT sing N N 242 ILE CB CG1 sing N N 243 ILE CB CG2 sing N N 244 ILE CB HB sing N N 245 ILE CG1 CD1 sing N N 246 ILE CG1 HG12 sing N N 247 ILE CG1 HG13 sing N N 248 ILE CG2 HG21 sing N N 249 ILE CG2 HG22 sing N N 250 ILE CG2 HG23 sing N N 251 ILE CD1 HD11 sing N N 252 ILE CD1 HD12 sing N N 253 ILE CD1 HD13 sing N N 254 ILE OXT HXT sing N N 255 LEU N CA sing N N 256 LEU N H sing N N 257 LEU N H2 sing N N 258 LEU CA C sing N N 259 LEU CA CB sing N N 260 LEU CA HA sing N N 261 LEU C O doub N N 262 LEU C OXT sing N N 263 LEU CB CG sing N N 264 LEU CB HB2 sing N N 265 LEU CB HB3 sing N N 266 LEU CG CD1 sing N N 267 LEU CG CD2 sing N N 268 LEU CG HG sing N N 269 LEU CD1 HD11 sing N N 270 LEU CD1 HD12 sing N N 271 LEU CD1 HD13 sing N N 272 LEU CD2 HD21 sing N N 273 LEU CD2 HD22 sing N N 274 LEU CD2 HD23 sing N N 275 LEU OXT HXT sing N N 276 LYS N CA sing N N 277 LYS N H sing N N 278 LYS N H2 sing N N 279 LYS CA C sing N N 280 LYS CA CB sing N N 281 LYS CA HA sing N N 282 LYS C O doub N N 283 LYS C OXT sing N N 284 LYS CB CG sing N N 285 LYS CB HB2 sing N N 286 LYS CB HB3 sing N N 287 LYS CG CD sing N N 288 LYS CG HG2 sing N N 289 LYS CG HG3 sing N N 290 LYS CD CE sing N N 291 LYS CD HD2 sing N N 292 LYS CD HD3 sing N N 293 LYS CE NZ sing N N 294 LYS CE HE2 sing N N 295 LYS CE HE3 sing N N 296 LYS NZ HZ1 sing N N 297 LYS NZ HZ2 sing N N 298 LYS NZ HZ3 sing N N 299 LYS OXT HXT sing N N 300 MET N CA sing N N 301 MET N H sing N N 302 MET N H2 sing N N 303 MET CA C sing N N 304 MET CA CB sing N N 305 MET CA HA sing N N 306 MET C O doub N N 307 MET C OXT sing N N 308 MET CB CG sing N N 309 MET CB HB2 sing N N 310 MET CB HB3 sing N N 311 MET CG SD sing N N 312 MET CG HG2 sing N N 313 MET CG HG3 sing N N 314 MET SD CE sing N N 315 MET CE HE1 sing N N 316 MET CE HE2 sing N N 317 MET CE HE3 sing N N 318 MET OXT HXT sing N N 319 PHE N CA sing N N 320 PHE N H sing N N 321 PHE N H2 sing N N 322 PHE CA C sing N N 323 PHE CA CB sing N N 324 PHE CA HA sing N N 325 PHE C O doub N N 326 PHE C OXT sing N N 327 PHE CB CG sing N N 328 PHE CB HB2 sing N N 329 PHE CB HB3 sing N N 330 PHE CG CD1 doub Y N 331 PHE CG CD2 sing Y N 332 PHE CD1 CE1 sing Y N 333 PHE CD1 HD1 sing N N 334 PHE CD2 CE2 doub Y N 335 PHE CD2 HD2 sing N N 336 PHE CE1 CZ doub Y N 337 PHE CE1 HE1 sing N N 338 PHE CE2 CZ sing Y N 339 PHE CE2 HE2 sing N N 340 PHE CZ HZ sing N N 341 PHE OXT HXT sing N N 342 PRO N CA sing N N 343 PRO N CD sing N N 344 PRO N H sing N N 345 PRO CA C sing N N 346 PRO CA CB sing N N 347 PRO CA HA sing N N 348 PRO C O doub N N 349 PRO C OXT sing N N 350 PRO CB CG sing N N 351 PRO CB HB2 sing N N 352 PRO CB HB3 sing N N 353 PRO CG CD sing N N 354 PRO CG HG2 sing N N 355 PRO CG HG3 sing N N 356 PRO CD HD2 sing N N 357 PRO CD HD3 sing N N 358 PRO OXT HXT sing N N 359 SER N CA sing N N 360 SER N H sing N N 361 SER N H2 sing N N 362 SER CA C sing N N 363 SER CA CB sing N N 364 SER CA HA sing N N 365 SER C O doub N N 366 SER C OXT sing N N 367 SER CB OG sing N N 368 SER CB HB2 sing N N 369 SER CB HB3 sing N N 370 SER OG HG sing N N 371 SER OXT HXT sing N N 372 THR N CA sing N N 373 THR N H sing N N 374 THR N H2 sing N N 375 THR CA C sing N N 376 THR CA CB sing N N 377 THR CA HA sing N N 378 THR C O doub N N 379 THR C OXT sing N N 380 THR CB OG1 sing N N 381 THR CB CG2 sing N N 382 THR CB HB sing N N 383 THR OG1 HG1 sing N N 384 THR CG2 HG21 sing N N 385 THR CG2 HG22 sing N N 386 THR CG2 HG23 sing N N 387 THR OXT HXT sing N N 388 TRP N CA sing N N 389 TRP N H sing N N 390 TRP N H2 sing N N 391 TRP CA C sing N N 392 TRP CA CB sing N N 393 TRP CA HA sing N N 394 TRP C O doub N N 395 TRP C OXT sing N N 396 TRP CB CG sing N N 397 TRP CB HB2 sing N N 398 TRP CB HB3 sing N N 399 TRP CG CD1 doub Y N 400 TRP CG CD2 sing Y N 401 TRP CD1 NE1 sing Y N 402 TRP CD1 HD1 sing N N 403 TRP CD2 CE2 doub Y N 404 TRP CD2 CE3 sing Y N 405 TRP NE1 CE2 sing Y N 406 TRP NE1 HE1 sing N N 407 TRP CE2 CZ2 sing Y N 408 TRP CE3 CZ3 doub Y N 409 TRP CE3 HE3 sing N N 410 TRP CZ2 CH2 doub Y N 411 TRP CZ2 HZ2 sing N N 412 TRP CZ3 CH2 sing Y N 413 TRP CZ3 HZ3 sing N N 414 TRP CH2 HH2 sing N N 415 TRP OXT HXT sing N N 416 TYR N CA sing N N 417 TYR N H sing N N 418 TYR N H2 sing N N 419 TYR CA C sing N N 420 TYR CA CB sing N N 421 TYR CA HA sing N N 422 TYR C O doub N N 423 TYR C OXT sing N N 424 TYR CB CG sing N N 425 TYR CB HB2 sing N N 426 TYR CB HB3 sing N N 427 TYR CG CD1 doub Y N 428 TYR CG CD2 sing Y N 429 TYR CD1 CE1 sing Y N 430 TYR CD1 HD1 sing N N 431 TYR CD2 CE2 doub Y N 432 TYR CD2 HD2 sing N N 433 TYR CE1 CZ doub Y N 434 TYR CE1 HE1 sing N N 435 TYR CE2 CZ sing Y N 436 TYR CE2 HE2 sing N N 437 TYR CZ OH sing N N 438 TYR OH HH sing N N 439 TYR OXT HXT sing N N 440 VAL N CA sing N N 441 VAL N H sing N N 442 VAL N H2 sing N N 443 VAL CA C sing N N 444 VAL CA CB sing N N 445 VAL CA HA sing N N 446 VAL C O doub N N 447 VAL C OXT sing N N 448 VAL CB CG1 sing N N 449 VAL CB CG2 sing N N 450 VAL CB HB sing N N 451 VAL CG1 HG11 sing N N 452 VAL CG1 HG12 sing N N 453 VAL CG1 HG13 sing N N 454 VAL CG2 HG21 sing N N 455 VAL CG2 HG22 sing N N 456 VAL CG2 HG23 sing N N 457 VAL OXT HXT sing N N 458 # _em_admin.current_status REL _em_admin.deposition_date 2025-09-15 _em_admin.deposition_site RCSB _em_admin.entry_id 9YA9 _em_admin.last_update 2026-02-18 _em_admin.map_release_date 2026-02-18 _em_admin.title ;Cryo-EM structure of ternary complex BCL6-CRBN-DDB1 with BMS-986458 (local refined), a potent and selective BCL6 ligand directed degrader (LDD) ; # loop_ _em_buffer_component.buffer_id _em_buffer_component.concentration _em_buffer_component.concentration_units _em_buffer_component.formula _em_buffer_component.id _em_buffer_component.name 1 20 mM ? 1 '(2-(4-(2-hydroxyethyl)piperazin-1-yl)ethanesulfonic acid)' 1 200 mM NaCl 2 'sodium chloride' 1 1 mM ? 3 'tris(2-carboxyethyl)phosphine' 1 0.25 % ? 4 'Dimethyl sulfoxide' 1 0.001 % ? 5 'Lauryl Maltose Neopentyl Glycol' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units MEGADALTONS _em_entity_assembly_molwt.value 0.162 # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 9606 _em_entity_assembly_naturalsource.organism 'Homo sapiens' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 7108 _em_entity_assembly_recombinant.organism 'Spodoptera frugiperda' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time 3.66 _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 40.0 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'TFS FALCON 4i (4k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged 1 _em_image_recording.num_real_images 11500 # _em_particle_selection.details ? _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.method ? _em_particle_selection.num_particles_selected 19671274 _em_particle_selection.reference_model ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version _em_software.reference_DOI 'PARTICLE SELECTION' ? 1 1 ? ? cryoSPARC ? ? 'PARTICLE SELECTION' ? 2 1 ? ? Topaz ? ? 'IMAGE ACQUISITION' ? 3 ? ? 1 EPU ? ? MASKING ? 4 ? ? ? ? ? ? 'CTF CORRECTION' ? 5 1 ? ? cryoSPARC ? ? 'LAYERLINE INDEXING' ? 6 ? ? ? ? ? ? 'DIFFRACTION INDEXING' ? 7 ? ? ? ? ? ? 'MODEL FITTING' ? 8 ? 1 ? Coot ? ? OTHER ? 9 ? ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? ? CLASSIFICATION ? 12 1 ? ? cryoSPARC ? ? RECONSTRUCTION ? 13 1 ? ? cryoSPARC ? ? 'MODEL REFINEMENT' ? 14 ? 1 ? PHENIX ? ? # _em_specimen.concentration 4.0 _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'Other private' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code pdb_00009q03 # _atom_sites.entry_id 9YA9 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C CL H N O S ZN # loop_ #