HEADER IMMUNE SYSTEM 18-SEP-25 9YC5 TITLE HUMAN UPAR BOUND TO THE FAB FRAGMENT OF TARGETED CANCER THERAPEUTIC TITLE 2 ANTIBODY FL1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: UROKINASE PLASMINOGEN ACTIVATOR SURFACE RECEPTOR; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: U-PAR,UPAR,MONOCYTE ACTIVATION ANTIGEN MO3; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: ANTI-UPAR ANTIBODY FL1 FAB HEAVY CHAIN; COMPND 8 CHAIN: H; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: ANTI-UPAR ANTIBODY FL1 FAB LIGHT CHAIN; COMPND 12 CHAIN: L; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PLAUR, MO3, UPAR; SOURCE 6 EXPRESSION_SYSTEM: DROSOPHILA MELANOGASTER; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7227; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: S2; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 11 ORGANISM_COMMON: MOUSE; SOURCE 12 ORGANISM_TAXID: 10090; SOURCE 13 EXPRESSION_SYSTEM: MUS MUSCULUS; SOURCE 14 EXPRESSION_SYSTEM_COMMON: MOUSE; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 10090; SOURCE 16 EXPRESSION_SYSTEM_CELL_LINE: HYBRIDOMAS; SOURCE 17 EXPRESSION_SYSTEM_CELL: HYBRIDOMAS; SOURCE 18 MOL_ID: 3; SOURCE 19 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 20 ORGANISM_COMMON: MOUSE; SOURCE 21 ORGANISM_TAXID: 10090; SOURCE 22 EXPRESSION_SYSTEM: MUS MUSCULUS; SOURCE 23 EXPRESSION_SYSTEM_COMMON: MOUSE; SOURCE 24 EXPRESSION_SYSTEM_TAXID: 10090; SOURCE 25 EXPRESSION_SYSTEM_CELL_LINE: HYBRIDOMAS; SOURCE 26 EXPRESSION_SYSTEM_CELL: HYBRIDOMAS KEYWDS COMPLEX, TARGETED CANCER THERAPY, MONOCLONAL ANTI-UPAR ANTIBODY FL1, KEYWDS 2 ANTIBODY-DRUG CONJUGATE, IMMUNE SYSTEM EXPDTA ELECTRON MICROSCOPY AUTHOR R.F.ANANE,J.C.WHISSTOCK,L.H.ENGELHOLM,R.H.P.LAW,M.PLOUG REVDAT 1 04-FEB-26 9YC5 0 JRNL AUTH R.F.ANANE,A.KUMARI,H.VENUGOPAL,S.TREPOUT,J.C.WHISSTOCK, JRNL AUTH 2 L.H.ENGELHOLM,R.H.P.LAW,M.PLOUG JRNL TITL STRUCTURAL BASIS FOR UPAR BINDING TO AN ANTIBODY DEVELOPED JRNL TITL 2 FOR TARGETED CANCER THERAPY. MECHANISTIC INSIGHTS INTO JRNL TITL 3 FLEXIBILITY, LIGAND RECOGNITION, AND MOLECULAR IMAGING. JRNL REF PROTEIN SCI. V. 35 70473 2026 JRNL REFN ESSN 1469-896X JRNL PMID 41575054 JRNL DOI 10.1002/PRO.70473 REMARK 2 REMARK 2 RESOLUTION. 2.94 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CRYOSPARC, EPU, CRYOSPARC, ISOLDE, REMARK 3 CRYOSPARC, CRYOSPARC, CRYOSPARC, REMARK 3 CRYOSPARC, PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : FLEXIBLE FIT REMARK 3 REFINEMENT TARGET : CROSS-CORRELATION COEFFICIENT REMARK 3 OVERALL ANISOTROPIC B VALUE : 112.000 REMARK 3 REMARK 3 FITTING PROCEDURE : AN INITIAL LOCAL FITTING WAS PERFORMED WITH REMARK 3 ISOLDE IMPLEMENTED IN CHIMERAX PRIOR TO REAL-SPACE REFINEMENT IN REMARK 3 PHENIX. REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.940 REMARK 3 NUMBER OF PARTICLES : 184642 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9YC5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-SEP-25. REMARK 100 THE DEPOSITION ID IS D_1000300176. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : BINARY COMPLEX OF HUMAN UPAR REMARK 245 AND FAB FRAGMENT OF ANTI-UPAR REMARK 245 ANTIBODY FL1 REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 3.50 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : FULL-LENGTH HUMAN UPAR, AND REMARK 245 FULL-LENGTH ANTIBODY FL1 (IGG) WERE MIXED TO FORM THE PROTEIN REMARK 245 COMPLEX WHICH WAS USED FOR EM SAMPLE. REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 7181 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 BIOQUANTUM (6K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 500.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 1070.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 105000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, H, L, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 1 REMARK 465 ARG A 2 REMARK 465 CYS A 3 REMARK 465 MET A 4 REMARK 465 GLN A 5 REMARK 465 CYS A 6 REMARK 465 LYS A 7 REMARK 465 THR A 8 REMARK 465 ASN A 9 REMARK 465 GLY A 10 REMARK 465 ASP A 11 REMARK 465 CYS A 12 REMARK 465 ARG A 13 REMARK 465 VAL A 14 REMARK 465 GLU A 15 REMARK 465 GLU A 16 REMARK 465 CYS A 17 REMARK 465 ALA A 18 REMARK 465 LEU A 19 REMARK 465 GLY A 20 REMARK 465 GLN A 21 REMARK 465 ASP A 22 REMARK 465 LEU A 23 REMARK 465 CYS A 24 REMARK 465 ARG A 25 REMARK 465 THR A 26 REMARK 465 THR A 27 REMARK 465 ILE A 28 REMARK 465 VAL A 29 REMARK 465 ARG A 30 REMARK 465 LEU A 31 REMARK 465 TRP A 32 REMARK 465 GLU A 33 REMARK 465 GLU A 34 REMARK 465 GLY A 35 REMARK 465 GLU A 36 REMARK 465 GLU A 37 REMARK 465 LEU A 38 REMARK 465 GLU A 39 REMARK 465 LEU A 40 REMARK 465 VAL A 41 REMARK 465 GLU A 42 REMARK 465 LYS A 43 REMARK 465 SER A 44 REMARK 465 CYS A 45 REMARK 465 THR A 46 REMARK 465 HIS A 47 REMARK 465 SER A 48 REMARK 465 GLU A 49 REMARK 465 LYS A 50 REMARK 465 THR A 51 REMARK 465 ASN A 52 REMARK 465 ARG A 53 REMARK 465 THR A 54 REMARK 465 LEU A 55 REMARK 465 SER A 56 REMARK 465 TYR A 57 REMARK 465 ARG A 58 REMARK 465 THR A 59 REMARK 465 GLY A 60 REMARK 465 LEU A 61 REMARK 465 LYS A 62 REMARK 465 ILE A 63 REMARK 465 THR A 64 REMARK 465 SER A 65 REMARK 465 LEU A 66 REMARK 465 THR A 67 REMARK 465 GLU A 68 REMARK 465 VAL A 69 REMARK 465 VAL A 70 REMARK 465 CYS A 71 REMARK 465 GLY A 72 REMARK 465 LEU A 73 REMARK 465 ASP A 74 REMARK 465 LEU A 75 REMARK 465 CYS A 76 REMARK 465 ASN A 77 REMARK 465 GLN A 78 REMARK 465 GLY A 79 REMARK 465 ASN A 80 REMARK 465 SER A 81 REMARK 465 GLY A 82 REMARK 465 ARG A 83 REMARK 465 ALA A 84 REMARK 465 VAL A 85 REMARK 465 THR A 86 REMARK 465 TYR A 87 REMARK 465 SER A 88 REMARK 465 ARG A 89 REMARK 465 SER A 90 REMARK 465 ARG A 91 REMARK 465 GLU A 132 REMARK 465 GLY A 133 REMARK 465 GLU A 134 REMARK 465 GLU A 135 REMARK 465 GLY A 136 REMARK 465 ARG A 137 REMARK 465 VAL A 278 REMARK 465 GLN A 279 REMARK 465 TYR A 280 REMARK 465 ARG A 281 REMARK 465 SER A 282 REMARK 465 GLY A 283 REMARK 465 SER H 134 REMARK 465 ALA H 135 REMARK 465 ALA H 136 REMARK 465 PRO H 218 REMARK 465 ARG H 219 REMARK 465 ASP H 220 REMARK 465 CYS H 221 REMARK 465 SER L 213 REMARK 465 PHE L 214 REMARK 465 ASN L 215 REMARK 465 ARG L 216 REMARK 465 ASN L 217 REMARK 465 GLU L 218 REMARK 465 CYS L 219 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 111 169.53 61.66 REMARK 500 GLU A 178 -169.72 -77.74 REMARK 500 CYS A 205 33.50 -142.55 REMARK 500 SER H 9 25.77 -144.49 REMARK 500 SER H 55 -2.70 72.12 REMARK 500 ALA H 131 71.10 52.63 REMARK 500 SER H 178 -156.94 -147.74 REMARK 500 PRO H 206 25.62 26.75 REMARK 500 SER H 208 164.97 62.83 REMARK 500 VAL H 212 -161.73 48.24 REMARK 500 SER L 25 -173.32 -172.31 REMARK 500 SER L 31 -91.69 178.45 REMARK 500 ASN L 33 74.02 -102.18 REMARK 500 TRP L 40 175.28 79.37 REMARK 500 LEU L 42 -165.96 -76.72 REMARK 500 SER L 70 77.91 -100.55 REMARK 500 TYR L 92 129.59 69.97 REMARK 500 TRP L 101 -179.31 -64.07 REMARK 500 GLU L 128 39.86 70.63 REMARK 500 ASN L 150 -159.71 -75.91 REMARK 500 VAL L 151 93.95 -68.10 REMARK 500 SER L 181 -174.27 -174.24 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY H 112 THR H 113 -147.87 REMARK 500 HIS H 205 PRO H 206 -148.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-72760 RELATED DB: EMDB REMARK 900 HUMAN UPAR BOUND TO THE FAB FRAGMENT OF TARGETED CANCER THERAPEUTIC REMARK 900 ANTIBODY FL1 DBREF 9YC5 A 1 283 UNP Q03405 UPAR_HUMAN 23 305 DBREF 9YC5 H 1 221 PDB 9YC5 9YC5 1 221 DBREF 9YC5 L 1 219 PDB 9YC5 9YC5 1 219 SEQRES 1 A 283 LEU ARG CYS MET GLN CYS LYS THR ASN GLY ASP CYS ARG SEQRES 2 A 283 VAL GLU GLU CYS ALA LEU GLY GLN ASP LEU CYS ARG THR SEQRES 3 A 283 THR ILE VAL ARG LEU TRP GLU GLU GLY GLU GLU LEU GLU SEQRES 4 A 283 LEU VAL GLU LYS SER CYS THR HIS SER GLU LYS THR ASN SEQRES 5 A 283 ARG THR LEU SER TYR ARG THR GLY LEU LYS ILE THR SER SEQRES 6 A 283 LEU THR GLU VAL VAL CYS GLY LEU ASP LEU CYS ASN GLN SEQRES 7 A 283 GLY ASN SER GLY ARG ALA VAL THR TYR SER ARG SER ARG SEQRES 8 A 283 TYR LEU GLU CYS ILE SER CYS GLY SER SER ASP MET SER SEQRES 9 A 283 CYS GLU ARG GLY ARG HIS GLN SER LEU GLN CYS ARG SER SEQRES 10 A 283 PRO GLU GLU GLN CYS LEU ASP VAL VAL THR HIS TRP ILE SEQRES 11 A 283 GLN GLU GLY GLU GLU GLY ARG PRO LYS ASP ASP ARG HIS SEQRES 12 A 283 LEU ARG GLY CYS GLY TYR LEU PRO GLY CYS PRO GLY SER SEQRES 13 A 283 ASN GLY PHE HIS ASN ASN ASP THR PHE HIS PHE LEU LYS SEQRES 14 A 283 CYS CYS ASN THR THR LYS CYS ASN GLU GLY PRO ILE LEU SEQRES 15 A 283 GLU LEU GLU ASN LEU PRO GLN ASN GLY ARG GLN CYS TYR SEQRES 16 A 283 SER CYS LYS GLY ASN SER THR HIS GLY CYS SER SER GLU SEQRES 17 A 283 GLU THR PHE LEU ILE ASP CYS ARG GLY PRO MET ASN GLN SEQRES 18 A 283 CYS LEU VAL ALA THR GLY THR HIS GLU PRO LYS ASN GLN SEQRES 19 A 283 SER TYR MET VAL ARG GLY CYS ALA THR ALA SER MET CYS SEQRES 20 A 283 GLN HIS ALA HIS LEU GLY ASP ALA PHE SER MET ASN HIS SEQRES 21 A 283 ILE ASP VAL SER CYS CYS THR LYS SER GLY CYS ASN HIS SEQRES 22 A 283 PRO ASP LEU ASP VAL GLN TYR ARG SER GLY SEQRES 1 H 221 GLU VAL GLN LEU GLN GLN SER GLY SER VAL LEU VAL ARG SEQRES 2 H 221 PRO GLY THR SER VAL ASN LEU SER CYS LYS ALA SER GLY SEQRES 3 H 221 TYR THR PHE THR SER TYR TRP MET SER TRP VAL LYS GLN SEQRES 4 H 221 ARG PRO GLY GLN GLY LEU GLU TRP ILE GLY GLU ILE PHE SEQRES 5 H 221 PRO LYS SER GLY ARG ILE ASN SER ASN GLU ASN PHE ARG SEQRES 6 H 221 GLY LYS ALA THR LEU THR VAL ASP THR SER SER SER THR SEQRES 7 H 221 ALA TYR ILE ASN LEU SER SER LEU THR SER GLU ASP SER SEQRES 8 H 221 ALA VAL TYR TYR CYS SER PRO ILE TYR SER GLY ASP TYR SEQRES 9 H 221 GLY PHE ALA ASP TRP GLY GLN GLY THR LEU VAL THR VAL SEQRES 10 H 221 SER ALA ALA LYS THR THR PRO PRO SER VAL TYR PRO LEU SEQRES 11 H 221 ALA PRO GLY SER ALA ALA GLN THR ASN SER MET VAL THR SEQRES 12 H 221 LEU GLY CYS LEU VAL LYS GLY TYR PHE PRO GLU PRO VAL SEQRES 13 H 221 THR VAL THR TRP ASN SER GLY SER LEU SER SER GLY VAL SEQRES 14 H 221 HIS THR PHE PRO ALA VAL LEU GLN SER ASP LEU TYR THR SEQRES 15 H 221 LEU SER SER SER VAL THR VAL PRO SER SER THR TRP PRO SEQRES 16 H 221 SER GLU THR VAL THR CYS ASN VAL ALA HIS PRO ALA SER SEQRES 17 H 221 SER THR LYS VAL ASP LYS LYS ILE VAL PRO ARG ASP CYS SEQRES 1 L 219 ASP ILE VAL MET THR GLN THR PRO LEU SER LEU PRO VAL SEQRES 2 L 219 SER LEU GLY ASP GLN ALA SER ILE SER CYS ARG SER SER SEQRES 3 L 219 GLN SER VAL VAL SER ASN ASN GLY LYS THR TYR LEU GLU SEQRES 4 L 219 TRP TYR LEU GLN LYS PRO GLY GLN SER PRO LYS LEU LEU SEQRES 5 L 219 ILE TYR LYS VAL SER ASN ARG PHE SER GLY VAL PRO ASP SEQRES 6 L 219 ARG PHE SER GLY SER GLY SER GLY THR ASP PHE THR LEU SEQRES 7 L 219 LYS ILE SER ARG VAL GLU ALA GLU ASP LEU GLY VAL TYR SEQRES 8 L 219 TYR CYS PHE GLN GLY SER HIS VAL PRO TRP THR PHE GLY SEQRES 9 L 219 GLY GLY THR LYS LEU GLU VAL LYS ARG ALA ASP ALA ALA SEQRES 10 L 219 PRO THR VAL SER ILE PHE PRO PRO SER SER GLU GLN LEU SEQRES 11 L 219 THR SER GLY GLY ALA SER VAL VAL CYS PHE LEU ASN ASN SEQRES 12 L 219 PHE TYR PRO LYS ASP ILE ASN VAL LYS TRP LYS ILE ASP SEQRES 13 L 219 GLY SER GLU ARG GLN ASN GLY VAL LEU ASN SER TRP THR SEQRES 14 L 219 ASP GLN ASP SER LYS ASP SER THR TYR SER MET SER SER SEQRES 15 L 219 THR LEU THR LEU THR LYS ASP GLU TYR GLU ARG HIS ASN SEQRES 16 L 219 SER TYR THR CYS GLU ALA THR HIS LYS THR SER THR SER SEQRES 17 L 219 PRO ILE VAL LYS SER PHE ASN ARG ASN GLU CYS HET NAG B 1 27 HET NAG B 2 27 HET BMA B 3 22 HET NAG A 301 28 HET NAG A 302 28 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 4 NAG 4(C8 H15 N O6) FORMUL 4 BMA C6 H12 O6 HELIX 1 AA1 THR A 243 HIS A 249 1 7 HELIX 2 AA2 LEU A 252 SER A 257 1 6 HELIX 3 AA3 HIS A 273 ASP A 277 5 5 HELIX 4 AA4 THR H 28 TYR H 32 5 5 HELIX 5 AA5 PRO H 53 GLY H 56 5 4 HELIX 6 AA6 THR H 87 SER H 91 5 5 HELIX 7 AA7 THR H 159 SER H 164 5 6 HELIX 8 AA8 SER H 192 TRP H 194 5 3 HELIX 9 AA9 LYS L 79 VAL L 83 5 5 HELIX 10 AB1 ILE L 122 SER L 127 1 6 HELIX 11 AB2 ILE L 155 GLY L 157 5 3 HELIX 12 AB3 THR L 183 THR L 187 1 5 SHEET 1 AA1 2 GLU A 94 ILE A 96 0 SHEET 2 AA1 2 SER A 112 GLN A 114 -1 O LEU A 113 N CYS A 95 SHEET 1 AA2 8 CYS A 98 GLY A 99 0 SHEET 2 AA2 8 ARG A 142 GLY A 148 -1 O ARG A 145 N CYS A 98 SHEET 3 AA2 8 GLN A 121 TRP A 129 -1 N THR A 127 O ARG A 142 SHEET 4 AA2 8 THR A 164 CYS A 171 -1 O PHE A 167 N VAL A 126 SHEET 5 AA2 8 ASN A 157 HIS A 160 -1 N PHE A 159 O HIS A 166 SHEET 6 AA2 8 SER A 235 ALA A 242 -1 O CYS A 241 N HIS A 160 SHEET 7 AA2 8 GLN A 189 GLY A 199 -1 N CYS A 197 O ARG A 239 SHEET 8 AA2 8 PHE A 211 ARG A 216 -1 O PHE A 211 N SER A 196 SHEET 1 AA3 8 CYS A 98 GLY A 99 0 SHEET 2 AA3 8 ARG A 142 GLY A 148 -1 O ARG A 145 N CYS A 98 SHEET 3 AA3 8 GLN A 121 TRP A 129 -1 N THR A 127 O ARG A 142 SHEET 4 AA3 8 THR A 164 CYS A 171 -1 O PHE A 167 N VAL A 126 SHEET 5 AA3 8 ASN A 157 HIS A 160 -1 N PHE A 159 O HIS A 166 SHEET 6 AA3 8 SER A 235 ALA A 242 -1 O CYS A 241 N HIS A 160 SHEET 7 AA3 8 GLN A 221 HIS A 229 -1 N GLN A 221 O ALA A 242 SHEET 8 AA3 8 MET A 258 CYS A 266 -1 O CYS A 266 N CYS A 222 SHEET 1 AA4 4 GLN H 3 GLN H 6 0 SHEET 2 AA4 4 VAL H 18 SER H 25 -1 O SER H 25 N GLN H 3 SHEET 3 AA4 4 THR H 78 LEU H 83 -1 O ALA H 79 N CYS H 22 SHEET 4 AA4 4 ALA H 68 ASP H 73 -1 N THR H 71 O TYR H 80 SHEET 1 AA5 2 LEU H 11 VAL H 12 0 SHEET 2 AA5 2 LEU H 114 VAL H 115 1 O LEU H 114 N VAL H 12 SHEET 1 AA6 4 ARG H 57 SER H 60 0 SHEET 2 AA6 4 LEU H 45 PHE H 52 -1 N PHE H 52 O ARG H 57 SHEET 3 AA6 4 TRP H 33 GLN H 39 -1 N MET H 34 O ILE H 51 SHEET 4 AA6 4 VAL H 93 ILE H 99 -1 O SER H 97 N SER H 35 SHEET 1 AA7 4 PRO H 125 TYR H 128 0 SHEET 2 AA7 4 MET H 141 TYR H 151 -1 O LEU H 147 N SER H 126 SHEET 3 AA7 4 TYR H 181 PRO H 190 -1 O VAL H 187 N LEU H 144 SHEET 4 AA7 4 VAL H 169 THR H 171 -1 N HIS H 170 O SER H 186 SHEET 1 AA8 4 THR L 5 THR L 7 0 SHEET 2 AA8 4 ILE L 21 ARG L 24 -1 O ARG L 24 N THR L 5 SHEET 3 AA8 4 SER L 72 ASP L 75 -1 O GLY L 73 N ILE L 21 SHEET 4 AA8 4 GLY L 62 ASP L 65 -1 N VAL L 63 O THR L 74 SHEET 1 AA9 3 SER L 48 PRO L 49 0 SHEET 2 AA9 3 THR L 36 GLU L 39 -1 N TYR L 37 O SER L 48 SHEET 3 AA9 3 GLU L 86 GLY L 89 -1 O ASP L 87 N LEU L 38 SHEET 1 AB1 4 ALA L 114 ALA L 116 0 SHEET 2 AB1 4 GLY L 133 CYS L 139 -1 O VAL L 137 N ALA L 114 SHEET 3 AB1 4 SER L 173 SER L 179 -1 O THR L 177 N GLY L 134 SHEET 4 AB1 4 GLU L 159 VAL L 164 -1 N ASN L 162 O SER L 176 SHEET 1 AB2 2 GLN L 129 LEU L 130 0 SHEET 2 AB2 2 SER L 181 SER L 182 -1 O SER L 181 N LEU L 130 SHEET 1 AB3 2 HIS L 194 ASN L 195 0 SHEET 2 AB3 2 SER L 206 THR L 207 -1 O THR L 207 N HIS L 194 SSBOND 1 CYS A 95 CYS A 122 1555 1555 2.03 SSBOND 2 CYS A 98 CYS A 105 1555 1555 2.03 SSBOND 3 CYS A 115 CYS A 147 1555 1555 2.03 SSBOND 4 CYS A 153 CYS A 170 1555 1555 2.03 SSBOND 5 CYS A 171 CYS A 176 1555 1555 2.02 SSBOND 6 CYS A 194 CYS A 222 1555 1555 2.03 SSBOND 7 CYS A 197 CYS A 205 1555 1555 2.03 SSBOND 8 CYS A 215 CYS A 241 1555 1555 2.03 SSBOND 9 CYS A 247 CYS A 265 1555 1555 2.02 SSBOND 10 CYS A 266 CYS A 271 1555 1555 2.02 SSBOND 11 CYS H 22 CYS H 96 1555 1555 2.03 SSBOND 12 CYS H 146 CYS H 201 1555 1555 2.03 LINK ND2 ASN A 162 C1 NAG A 301 1555 1555 1.44 LINK ND2 ASN A 172 C1 NAG A 302 1555 1555 1.44 LINK ND2 ASN A 200 C1 NAG B 1 1555 1555 1.44 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.45 LINK O4 NAG B 2 C1 BMA B 3 1555 1555 1.45 CISPEP 1 CYS A 153 PRO A 154 0 3.07 CISPEP 2 GLU A 230 PRO A 231 0 -6.10 CISPEP 3 TRP H 194 PRO H 195 0 -1.09 CISPEP 4 THR L 7 PRO L 8 0 -5.54 CISPEP 5 PHE L 94 GLN L 95 0 23.29 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 CONECT 61 447 CONECT 101 180 CONECT 180 101 CONECT 341 762 CONECT 447 61 CONECT 762 341 CONECT 840 1091 CONECT 956 9105 CONECT 1091 840 CONECT 1101 1174 CONECT 1113 9133 CONECT 1174 1101 CONECT 1447 1839 CONECT 1489 1590 CONECT 1530 9029 CONECT 1590 1489 CONECT 1736 2124 CONECT 1839 1447 CONECT 2124 1736 CONECT 2196 2452 CONECT 2452 2196 CONECT 2462 2526 CONECT 2526 2462 CONECT 2938 4076 CONECT 4076 2938 CONECT 4735 5544 CONECT 5544 4735 CONECT 9029 1530 9030 9040 9043 CONECT 9030 9029 9031 9037 9044 CONECT 9031 9030 9032 9038 9045 CONECT 9032 9031 9033 9039 9046 CONECT 9033 9032 9034 9040 9047 CONECT 9034 9033 9041 9048 9049 CONECT 9035 9036 9037 9042 CONECT 9036 9035 9050 9051 9052 CONECT 9037 9030 9035 9053 CONECT 9038 9031 9054 CONECT 9039 9032 9056 CONECT 9040 9029 9033 CONECT 9041 9034 9055 CONECT 9042 9035 CONECT 9043 9029 CONECT 9044 9030 CONECT 9045 9031 CONECT 9046 9032 CONECT 9047 9033 CONECT 9048 9034 CONECT 9049 9034 CONECT 9050 9036 CONECT 9051 9036 CONECT 9052 9036 CONECT 9053 9037 CONECT 9054 9038 CONECT 9055 9041 CONECT 9056 9039 9057 9067 9070 CONECT 9057 9056 9058 9064 9071 CONECT 9058 9057 9059 9065 9072 CONECT 9059 9058 9060 9066 9073 CONECT 9060 9059 9061 9067 9074 CONECT 9061 9060 9068 9075 9076 CONECT 9062 9063 9064 9069 CONECT 9063 9062 9077 9078 9079 CONECT 9064 9057 9062 9080 CONECT 9065 9058 9081 CONECT 9066 9059 9083 CONECT 9067 9056 9060 CONECT 9068 9061 9082 CONECT 9069 9062 CONECT 9070 9056 CONECT 9071 9057 CONECT 9072 9058 CONECT 9073 9059 CONECT 9074 9060 CONECT 9075 9061 CONECT 9076 9061 CONECT 9077 9063 CONECT 9078 9063 CONECT 9079 9063 CONECT 9080 9064 CONECT 9081 9065 CONECT 9082 9068 CONECT 9083 9066 9084 9092 9094 CONECT 9084 9083 9085 9089 9095 CONECT 9085 9084 9086 9090 9096 CONECT 9086 9085 9087 9091 9097 CONECT 9087 9086 9088 9092 9098 CONECT 9088 9087 9093 9099 9100 CONECT 9089 9084 9101 CONECT 9090 9085 9102 CONECT 9091 9086 9103 CONECT 9092 9083 9087 CONECT 9093 9088 9104 CONECT 9094 9083 CONECT 9095 9084 CONECT 9096 9085 CONECT 9097 9086 CONECT 9098 9087 CONECT 9099 9088 CONECT 9100 9088 CONECT 9101 9089 CONECT 9102 9090 CONECT 9103 9091 CONECT 9104 9093 CONECT 9105 956 9106 9116 9119 CONECT 9106 9105 9107 9113 9120 CONECT 9107 9106 9108 9114 9121 CONECT 9108 9107 9109 9115 9122 CONECT 9109 9108 9110 9116 9123 CONECT 9110 9109 9117 9124 9125 CONECT 9111 9112 9113 9118 CONECT 9112 9111 9126 9127 9128 CONECT 9113 9106 9111 9129 CONECT 9114 9107 9130 CONECT 9115 9108 9131 CONECT 9116 9105 9109 CONECT 9117 9110 9132 CONECT 9118 9111 CONECT 9119 9105 CONECT 9120 9106 CONECT 9121 9107 CONECT 9122 9108 CONECT 9123 9109 CONECT 9124 9110 CONECT 9125 9110 CONECT 9126 9112 CONECT 9127 9112 CONECT 9128 9112 CONECT 9129 9113 CONECT 9130 9114 CONECT 9131 9115 CONECT 9132 9117 CONECT 9133 1113 9134 9144 9147 CONECT 9134 9133 9135 9141 9148 CONECT 9135 9134 9136 9142 9149 CONECT 9136 9135 9137 9143 9150 CONECT 9137 9136 9138 9144 9151 CONECT 9138 9137 9145 9152 9153 CONECT 9139 9140 9141 9146 CONECT 9140 9139 9154 9155 9156 CONECT 9141 9134 9139 9157 CONECT 9142 9135 9158 CONECT 9143 9136 9159 CONECT 9144 9133 9137 CONECT 9145 9138 9160 CONECT 9146 9139 CONECT 9147 9133 CONECT 9148 9134 CONECT 9149 9135 CONECT 9150 9136 CONECT 9151 9137 CONECT 9152 9138 CONECT 9153 9138 CONECT 9154 9140 CONECT 9155 9140 CONECT 9156 9140 CONECT 9157 9141 CONECT 9158 9142 CONECT 9159 9143 CONECT 9160 9145 MASTER 285 0 5 12 47 0 0 6 4689 3 159 56 END