HEADER VIRAL PROTEIN 12-OCT-25 9YNX TITLE LOCAL REFINEMENT OF FAB-14/SARS-COV-2 D614G SPIKE COMPLEX, MODE I, TITLE 2 SUBGROUP I CONFORMATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPIKE PROTEIN S1; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: FAB-14 HEAVY CHAIN; COMPND 7 CHAIN: D, F; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: FAB-14 LIGHT CHAIN; COMPND 11 CHAIN: E, G; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 3 2; SOURCE 4 ORGANISM_TAXID: 2697049; SOURCE 5 GENE: S, 2; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 14 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 16 MOL_ID: 3; SOURCE 17 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 18 ORGANISM_COMMON: HUMAN; SOURCE 19 ORGANISM_TAXID: 9606; SOURCE 20 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 21 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 22 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS SARS-COV-2, NEUTRALING ANTIBODY, VIRAL PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR Y.WANG,Y.HU,P.LEIMAN,X.XIE REVDAT 1 18-MAR-26 9YNX 0 JRNL AUTH Y.WANG,Y.HU,Z.KU,J.YEUNG,J.ZOU,M.WOODSON,N.PROKHOROV, JRNL AUTH 2 E.KNYAZHANSKAYA,H.ZHAO,M.SHERMAN,Z.AN,S.CARROLL,P.-Y.SHI, JRNL AUTH 3 P.LEIMAN,X.XIE JRNL TITL NEUTRALIZATION OF SARS-COV-2 BY IGM-14 VIA ENGAGEMENT OF TWO JRNL TITL 2 DISTINCT SPIKE EPITOPES JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 4.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CRYOSPARC, PHENIX, SERIALEM, CRYOSPARC REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 4.100 REMARK 3 NUMBER OF PARTICLES : 66402 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9YNX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-OCT-25. REMARK 100 THE DEPOSITION ID IS D_1000300982. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : LOCAL REFINEMENT OF FAB-14/SARS REMARK 245 -COV-2 D614G SPIKE COMPLEX, REMARK 245 MODE IV, SUBGROUP I CONFORMATION REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 8.00 REMARK 245 SAMPLE DETAILS : TWO FAB-14 BIND TO 2-UP-RBD REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 (6K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : DIFFRACTION REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 4317.00 REMARK 245 ILLUMINATION MODE : SPOT SCAN REMARK 245 NOMINAL MAGNIFICATION : 10500 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, D, E, F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 323 REMARK 465 GLU A 324 REMARK 465 SER A 325 REMARK 465 ILE A 326 REMARK 465 VAL A 327 REMARK 465 ARG A 328 REMARK 465 PHE A 329 REMARK 465 PRO A 330 REMARK 465 ASN A 331 REMARK 465 ILE A 332 REMARK 465 THR A 333 REMARK 465 LEU A 518 REMARK 465 HIS A 519 REMARK 465 ALA A 520 REMARK 465 PRO A 521 REMARK 465 ALA A 522 REMARK 465 THR B 323 REMARK 465 GLU B 324 REMARK 465 SER B 325 REMARK 465 ILE B 326 REMARK 465 VAL B 327 REMARK 465 ARG B 328 REMARK 465 PHE B 329 REMARK 465 PRO B 330 REMARK 465 ASN B 331 REMARK 465 ILE B 332 REMARK 465 SER D 230 REMARK 465 CYS D 231 REMARK 465 ASP D 232 REMARK 465 LYS D 233 REMARK 465 THR D 234 REMARK 465 HIS D 235 REMARK 465 GLN E 1 REMARK 465 SER F 230 REMARK 465 CYS F 231 REMARK 465 ASP F 232 REMARK 465 LYS F 233 REMARK 465 THR F 234 REMARK 465 HIS F 235 REMARK 465 GLN G 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 343 49.35 -84.22 REMARK 500 ASN A 360 57.78 34.62 REMARK 500 ALA A 372 11.12 -67.87 REMARK 500 PHE A 377 31.27 -140.60 REMARK 500 TYR A 423 117.62 -162.61 REMARK 500 ASP A 442 34.79 -98.15 REMARK 500 ASN B 360 53.35 35.71 REMARK 500 SER B 371 -1.97 66.99 REMARK 500 ALA B 372 -130.22 43.64 REMARK 500 SER B 373 14.01 59.38 REMARK 500 TYR B 423 113.34 -161.43 REMARK 500 LEU B 518 -137.23 57.62 REMARK 500 SER D 44 -60.30 -92.46 REMARK 500 ARG D 56 76.47 -101.45 REMARK 500 SER D 57 -9.39 71.40 REMARK 500 GLU E 52 -140.85 55.55 REMARK 500 PRO E 57 -179.87 -66.60 REMARK 500 ASN E 129 42.78 36.66 REMARK 500 ASN E 171 -6.17 68.05 REMARK 500 SER E 191 47.85 -143.86 REMARK 500 SER F 57 -4.84 70.30 REMARK 500 ASN F 80 61.97 63.05 REMARK 500 GLU G 52 -142.16 54.57 REMARK 500 THR G 163 -165.28 -79.35 REMARK 500 ASN G 171 -8.08 71.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-73245 RELATED DB: EMDB REMARK 900 LOCAL REFINEMENT OF FAB-14/SARS-COV-2 D614G SPIKE COMPLEX, MODE I, REMARK 900 SUBGROUP I CONFORMATION DBREF 9YNX A 323 527 UNP P0DTC2 SPIKE_SARS2 323 527 DBREF 9YNX B 323 527 UNP P0DTC2 SPIKE_SARS2 323 527 DBREF 9YNX D 1 235 PDB 9YNX 9YNX 1 235 DBREF 9YNX E 1 213 PDB 9YNX 9YNX 1 213 DBREF 9YNX F 1 235 PDB 9YNX 9YNX 1 235 DBREF 9YNX G 1 213 PDB 9YNX 9YNX 1 213 SEQRES 1 A 205 THR GLU SER ILE VAL ARG PHE PRO ASN ILE THR ASN LEU SEQRES 2 A 205 CYS PRO PHE GLY GLU VAL PHE ASN ALA THR ARG PHE ALA SEQRES 3 A 205 SER VAL TYR ALA TRP ASN ARG LYS ARG ILE SER ASN CYS SEQRES 4 A 205 VAL ALA ASP TYR SER VAL LEU TYR ASN SER ALA SER PHE SEQRES 5 A 205 SER THR PHE LYS CYS TYR GLY VAL SER PRO THR LYS LEU SEQRES 6 A 205 ASN ASP LEU CYS PHE THR ASN VAL TYR ALA ASP SER PHE SEQRES 7 A 205 VAL ILE ARG GLY ASP GLU VAL ARG GLN ILE ALA PRO GLY SEQRES 8 A 205 GLN THR GLY LYS ILE ALA ASP TYR ASN TYR LYS LEU PRO SEQRES 9 A 205 ASP ASP PHE THR GLY CYS VAL ILE ALA TRP ASN SER ASN SEQRES 10 A 205 ASN LEU ASP SER LYS VAL GLY GLY ASN TYR ASN TYR LEU SEQRES 11 A 205 TYR ARG LEU PHE ARG LYS SER ASN LEU LYS PRO PHE GLU SEQRES 12 A 205 ARG ASP ILE SER THR GLU ILE TYR GLN ALA GLY SER THR SEQRES 13 A 205 PRO CYS ASN GLY VAL GLU GLY PHE ASN CYS TYR PHE PRO SEQRES 14 A 205 LEU GLN SER TYR GLY PHE GLN PRO THR ASN GLY VAL GLY SEQRES 15 A 205 TYR GLN PRO TYR ARG VAL VAL VAL LEU SER PHE GLU LEU SEQRES 16 A 205 LEU HIS ALA PRO ALA THR VAL CYS GLY PRO SEQRES 1 B 205 THR GLU SER ILE VAL ARG PHE PRO ASN ILE THR ASN LEU SEQRES 2 B 205 CYS PRO PHE GLY GLU VAL PHE ASN ALA THR ARG PHE ALA SEQRES 3 B 205 SER VAL TYR ALA TRP ASN ARG LYS ARG ILE SER ASN CYS SEQRES 4 B 205 VAL ALA ASP TYR SER VAL LEU TYR ASN SER ALA SER PHE SEQRES 5 B 205 SER THR PHE LYS CYS TYR GLY VAL SER PRO THR LYS LEU SEQRES 6 B 205 ASN ASP LEU CYS PHE THR ASN VAL TYR ALA ASP SER PHE SEQRES 7 B 205 VAL ILE ARG GLY ASP GLU VAL ARG GLN ILE ALA PRO GLY SEQRES 8 B 205 GLN THR GLY LYS ILE ALA ASP TYR ASN TYR LYS LEU PRO SEQRES 9 B 205 ASP ASP PHE THR GLY CYS VAL ILE ALA TRP ASN SER ASN SEQRES 10 B 205 ASN LEU ASP SER LYS VAL GLY GLY ASN TYR ASN TYR LEU SEQRES 11 B 205 TYR ARG LEU PHE ARG LYS SER ASN LEU LYS PRO PHE GLU SEQRES 12 B 205 ARG ASP ILE SER THR GLU ILE TYR GLN ALA GLY SER THR SEQRES 13 B 205 PRO CYS ASN GLY VAL GLU GLY PHE ASN CYS TYR PHE PRO SEQRES 14 B 205 LEU GLN SER TYR GLY PHE GLN PRO THR ASN GLY VAL GLY SEQRES 15 B 205 TYR GLN PRO TYR ARG VAL VAL VAL LEU SER PHE GLU LEU SEQRES 16 B 205 LEU HIS ALA PRO ALA THR VAL CYS GLY PRO SEQRES 1 D 235 GLU VAL GLN LEU GLN GLN SER GLY PRO GLY LEU VAL LYS SEQRES 2 D 235 PRO SER GLN THR LEU SER LEU THR CYS ALA ILE SER GLY SEQRES 3 D 235 ASP SER VAL SER SER ASN SER ALA ALA TRP ASN TRP ILE SEQRES 4 D 235 ARG GLN SER PRO SER ARG GLY LEU GLU TRP LEU GLY ARG SEQRES 5 D 235 THR TYR TYR ARG SER LYS TRP TYR ASN ASP TYR ALA VAL SEQRES 6 D 235 SER VAL LYS SER ARG ILE THR ILE ASN PRO ASP THR SER SEQRES 7 D 235 LYS ASN GLN PHE SER LEU GLN LEU ASN SER VAL THR PRO SEQRES 8 D 235 GLU ASP THR ALA VAL TYR TYR CYS ALA ARG GLU GLU GLN SEQRES 9 D 235 GLN LEU VAL HIS ASP TYR TYR TYR TYR GLY MET ASP VAL SEQRES 10 D 235 TRP GLY GLN GLY THR MET VAL THR VAL SER SER ALA SER SEQRES 11 D 235 THR LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SER SER SEQRES 12 D 235 LYS SER THR SER GLY GLY THR ALA ALA LEU GLY CYS LEU SEQRES 13 D 235 VAL LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SER TRP SEQRES 14 D 235 ASN SER GLY ALA LEU THR SER GLY VAL HIS THR PHE PRO SEQRES 15 D 235 ALA VAL LEU GLN SER SER GLY LEU TYR SER LEU SER SER SEQRES 16 D 235 VAL VAL THR VAL PRO SER SER SER LEU GLY THR GLN THR SEQRES 17 D 235 TYR ILE CYS ASN VAL ASN HIS LYS PRO SER ASN THR LYS SEQRES 18 D 235 VAL ASP LYS ARG VAL GLU PRO LYS SER CYS ASP LYS THR SEQRES 19 D 235 HIS SEQRES 1 E 213 GLN ALA VAL VAL THR GLN PRO ALA SER VAL SER GLY SER SEQRES 2 E 213 PRO GLY GLN SER ILE THR ILE SER CYS THR GLY THR SER SEQRES 3 E 213 SER ASP ILE GLY ALA TYR ASN TYR ILE SER TRP TYR GLN SEQRES 4 E 213 GLN HIS PRO GLY LYS ALA PRO LYS LEU ILE ILE TYR GLU SEQRES 5 E 213 VAL SER ASN ARG PRO SER GLY ILE SER TYR ARG PHE SER SEQRES 6 E 213 GLY SER LYS SER GLY ASN THR ALA SER LEU THR ILE SER SEQRES 7 E 213 GLY LEU GLN ALA GLU ASP GLU ALA ASN TYR TYR CYS SER SEQRES 8 E 213 SER TYR ALA GLY SER ILE SER PHE GLY GLY GLY THR LYS SEQRES 9 E 213 VAL THR VAL LEU GLN PRO LYS ALA ASN PRO THR VAL THR SEQRES 10 E 213 LEU PHE PRO PRO SER SER GLU GLU LEU GLN ALA ASN LYS SEQRES 11 E 213 ALA THR LEU VAL CYS LEU ILE SER ASP PHE TYR PRO GLY SEQRES 12 E 213 ALA VAL THR VAL ALA TRP LYS ALA ASP GLY SER PRO VAL SEQRES 13 E 213 LYS ALA GLY VAL GLU THR THR LYS PRO SER LYS GLN SER SEQRES 14 E 213 ASN ASN LYS TYR ALA ALA SER SER TYR LEU SER LEU THR SEQRES 15 E 213 PRO GLU GLN TRP LYS SER HIS ARG SER TYR SER CYS GLN SEQRES 16 E 213 VAL THR HIS GLU GLY SER THR VAL GLU LYS THR VAL ALA SEQRES 17 E 213 PRO THR GLU CYS SER SEQRES 1 F 235 GLU VAL GLN LEU GLN GLN SER GLY PRO GLY LEU VAL LYS SEQRES 2 F 235 PRO SER GLN THR LEU SER LEU THR CYS ALA ILE SER GLY SEQRES 3 F 235 ASP SER VAL SER SER ASN SER ALA ALA TRP ASN TRP ILE SEQRES 4 F 235 ARG GLN SER PRO SER ARG GLY LEU GLU TRP LEU GLY ARG SEQRES 5 F 235 THR TYR TYR ARG SER LYS TRP TYR ASN ASP TYR ALA VAL SEQRES 6 F 235 SER VAL LYS SER ARG ILE THR ILE ASN PRO ASP THR SER SEQRES 7 F 235 LYS ASN GLN PHE SER LEU GLN LEU ASN SER VAL THR PRO SEQRES 8 F 235 GLU ASP THR ALA VAL TYR TYR CYS ALA ARG GLU GLU GLN SEQRES 9 F 235 GLN LEU VAL HIS ASP TYR TYR TYR TYR GLY MET ASP VAL SEQRES 10 F 235 TRP GLY GLN GLY THR MET VAL THR VAL SER SER ALA SER SEQRES 11 F 235 THR LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SER SER SEQRES 12 F 235 LYS SER THR SER GLY GLY THR ALA ALA LEU GLY CYS LEU SEQRES 13 F 235 VAL LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SER TRP SEQRES 14 F 235 ASN SER GLY ALA LEU THR SER GLY VAL HIS THR PHE PRO SEQRES 15 F 235 ALA VAL LEU GLN SER SER GLY LEU TYR SER LEU SER SER SEQRES 16 F 235 VAL VAL THR VAL PRO SER SER SER LEU GLY THR GLN THR SEQRES 17 F 235 TYR ILE CYS ASN VAL ASN HIS LYS PRO SER ASN THR LYS SEQRES 18 F 235 VAL ASP LYS ARG VAL GLU PRO LYS SER CYS ASP LYS THR SEQRES 19 F 235 HIS SEQRES 1 G 213 GLN ALA VAL VAL THR GLN PRO ALA SER VAL SER GLY SER SEQRES 2 G 213 PRO GLY GLN SER ILE THR ILE SER CYS THR GLY THR SER SEQRES 3 G 213 SER ASP ILE GLY ALA TYR ASN TYR ILE SER TRP TYR GLN SEQRES 4 G 213 GLN HIS PRO GLY LYS ALA PRO LYS LEU ILE ILE TYR GLU SEQRES 5 G 213 VAL SER ASN ARG PRO SER GLY ILE SER TYR ARG PHE SER SEQRES 6 G 213 GLY SER LYS SER GLY ASN THR ALA SER LEU THR ILE SER SEQRES 7 G 213 GLY LEU GLN ALA GLU ASP GLU ALA ASN TYR TYR CYS SER SEQRES 8 G 213 SER TYR ALA GLY SER ILE SER PHE GLY GLY GLY THR LYS SEQRES 9 G 213 VAL THR VAL LEU GLN PRO LYS ALA ASN PRO THR VAL THR SEQRES 10 G 213 LEU PHE PRO PRO SER SER GLU GLU LEU GLN ALA ASN LYS SEQRES 11 G 213 ALA THR LEU VAL CYS LEU ILE SER ASP PHE TYR PRO GLY SEQRES 12 G 213 ALA VAL THR VAL ALA TRP LYS ALA ASP GLY SER PRO VAL SEQRES 13 G 213 LYS ALA GLY VAL GLU THR THR LYS PRO SER LYS GLN SER SEQRES 14 G 213 ASN ASN LYS TYR ALA ALA SER SER TYR LEU SER LEU THR SEQRES 15 G 213 PRO GLU GLN TRP LYS SER HIS ARG SER TYR SER CYS GLN SEQRES 16 G 213 VAL THR HIS GLU GLY SER THR VAL GLU LYS THR VAL ALA SEQRES 17 G 213 PRO THR GLU CYS SER HET NAG H 1 14 HET NAG H 2 14 HET NAG A 601 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 7 NAG 3(C8 H15 N O6) HELIX 1 AA1 PRO A 337 ASN A 343 1 7 HELIX 2 AA2 SER A 349 TRP A 353 5 5 HELIX 3 AA3 ASP A 364 ASN A 370 1 7 HELIX 4 AA4 SER A 383 ASP A 389 5 7 HELIX 5 AA5 ASP A 405 ILE A 410 5 6 HELIX 6 AA6 GLY A 416 ASN A 422 1 7 HELIX 7 AA7 GLY A 502 TYR A 505 5 4 HELIX 8 AA8 PRO B 337 ASN B 343 1 7 HELIX 9 AA9 SER B 349 TRP B 353 5 5 HELIX 10 AB1 ASP B 364 ASN B 370 1 7 HELIX 11 AB2 SER B 383 ASP B 389 5 7 HELIX 12 AB3 ASP B 405 ILE B 410 5 6 HELIX 13 AB4 GLY B 416 ASN B 422 1 7 HELIX 14 AB5 SER B 438 SER B 443 1 6 HELIX 15 AB6 SER D 147 THR D 150 5 4 HELIX 16 AB7 GLN E 81 GLU E 85 5 5 HELIX 17 AB8 SER E 122 GLN E 127 1 6 HELIX 18 AB9 THR E 182 LYS E 187 1 6 HELIX 19 AC1 ALA E 208 SER E 213 1 6 HELIX 20 AC2 ALA F 64 SER F 69 1 6 HELIX 21 AC3 SER F 147 THR F 150 5 4 HELIX 22 AC4 SER G 122 ALA G 128 1 7 HELIX 23 AC5 THR G 182 HIS G 189 1 8 HELIX 24 AC6 ALA G 208 SER G 213 1 6 SHEET 1 AA1 4 ASN A 354 ILE A 358 0 SHEET 2 AA1 4 CYS A 391 ARG A 403 -1 O VAL A 395 N ILE A 358 SHEET 3 AA1 4 PRO A 507 LEU A 517 -1 O TYR A 508 N ILE A 402 SHEET 4 AA1 4 CYS A 432 ASN A 437 -1 N ILE A 434 O VAL A 511 SHEET 1 AA2 3 ASN A 354 ILE A 358 0 SHEET 2 AA2 3 CYS A 391 ARG A 403 -1 O VAL A 395 N ILE A 358 SHEET 3 AA2 3 VAL A 524 CYS A 525 -1 O VAL A 524 N PHE A 392 SHEET 1 AA3 2 TYR A 473 GLN A 474 0 SHEET 2 AA3 2 CYS A 488 TYR A 489 -1 O TYR A 489 N TYR A 473 SHEET 1 AA4 4 ASN B 354 ILE B 358 0 SHEET 2 AA4 4 VAL B 395 ARG B 403 -1 O ALA B 397 N LYS B 356 SHEET 3 AA4 4 PRO B 507 PHE B 515 -1 O SER B 514 N TYR B 396 SHEET 4 AA4 4 CYS B 432 ASN B 437 -1 N CYS B 432 O LEU B 513 SHEET 1 AA5 2 CYS B 391 PHE B 392 0 SHEET 2 AA5 2 VAL B 524 CYS B 525 -1 N VAL B 524 O PHE B 392 SHEET 1 AA6 2 LEU B 452 ARG B 454 0 SHEET 2 AA6 2 LEU B 492 SER B 494 -1 O GLN B 493 N TYR B 453 SHEET 1 AA7 2 TYR B 473 GLN B 474 0 SHEET 2 AA7 2 CYS B 488 TYR B 489 -1 O TYR B 489 N TYR B 473 SHEET 1 AA8 3 GLN D 3 SER D 7 0 SHEET 2 AA8 3 THR D 21 SER D 25 -1 O ALA D 23 N GLN D 5 SHEET 3 AA8 3 GLN D 81 SER D 83 -1 O PHE D 82 N CYS D 22 SHEET 1 AA9 5 LEU D 11 VAL D 12 0 SHEET 2 AA9 5 THR D 122 VAL D 126 1 O THR D 125 N VAL D 12 SHEET 3 AA9 5 ALA D 95 TYR D 97 -1 N TYR D 97 O THR D 122 SHEET 4 AA9 5 ARG D 40 SER D 42 -1 N GLN D 41 O VAL D 96 SHEET 5 AA9 5 GLY D 46 GLU D 48 -1 O GLU D 48 N ARG D 40 SHEET 1 AB1 5 TRP D 59 ASN D 61 0 SHEET 2 AB1 5 ARG D 52 TYR D 55 -1 N TYR D 54 O TYR D 60 SHEET 3 AB1 5 ALA D 34 ASN D 37 -1 N TRP D 36 O THR D 53 SHEET 4 AB1 5 ALA D 100 GLU D 103 -1 O GLU D 102 N ALA D 35 SHEET 5 AB1 5 GLY D 114 TRP D 118 -1 O ASP D 116 N ARG D 101 SHEET 1 AB2 3 SER D 135 LEU D 139 0 SHEET 2 AB2 3 ALA D 151 TYR D 160 -1 O LEU D 156 N PHE D 137 SHEET 3 AB2 3 TYR D 191 VAL D 199 -1 O LEU D 193 N VAL D 157 SHEET 1 AB3 3 THR D 166 TRP D 169 0 SHEET 2 AB3 3 ILE D 210 HIS D 215 -1 O ASN D 214 N THR D 166 SHEET 3 AB3 3 THR D 220 ARG D 225 -1 O VAL D 222 N VAL D 213 SHEET 1 AB4 2 SER E 9 GLY E 12 0 SHEET 2 AB4 2 LYS E 104 VAL E 107 1 O THR E 106 N GLY E 12 SHEET 1 AB5 3 ILE E 18 THR E 23 0 SHEET 2 AB5 3 THR E 72 ILE E 77 -1 O LEU E 75 N ILE E 20 SHEET 3 AB5 3 PHE E 64 SER E 69 -1 N SER E 67 O SER E 74 SHEET 1 AB6 4 LYS E 47 TYR E 51 0 SHEET 2 AB6 4 ILE E 35 GLN E 40 -1 N TRP E 37 O ILE E 50 SHEET 3 AB6 4 ASN E 87 TYR E 93 -1 O ASN E 87 N GLN E 40 SHEET 4 AB6 4 ILE E 97 PHE E 99 -1 O SER E 98 N SER E 92 SHEET 1 AB7 4 THR E 115 PHE E 119 0 SHEET 2 AB7 4 ALA E 131 PHE E 140 -1 O LEU E 136 N THR E 117 SHEET 3 AB7 4 TYR E 173 LEU E 181 -1 O TYR E 173 N PHE E 140 SHEET 4 AB7 4 VAL E 160 THR E 162 -1 N GLU E 161 O TYR E 178 SHEET 1 AB8 4 THR E 115 PHE E 119 0 SHEET 2 AB8 4 ALA E 131 PHE E 140 -1 O LEU E 136 N THR E 117 SHEET 3 AB8 4 TYR E 173 LEU E 181 -1 O TYR E 173 N PHE E 140 SHEET 4 AB8 4 SER E 166 LYS E 167 -1 N SER E 166 O ALA E 174 SHEET 1 AB9 4 SER E 154 PRO E 155 0 SHEET 2 AB9 4 VAL E 145 ALA E 151 -1 N ALA E 151 O SER E 154 SHEET 3 AB9 4 SER E 193 HIS E 198 -1 O GLN E 195 N ALA E 148 SHEET 4 AB9 4 SER E 201 THR E 206 -1 O VAL E 203 N VAL E 196 SHEET 1 AC1 4 GLN F 3 SER F 7 0 SHEET 2 AC1 4 LEU F 20 SER F 25 -1 O ALA F 23 N GLN F 5 SHEET 3 AC1 4 GLN F 81 LEU F 84 -1 O LEU F 84 N LEU F 20 SHEET 4 AC1 4 PRO F 75 ASP F 76 -1 N ASP F 76 O GLN F 81 SHEET 1 AC2 5 LEU F 11 VAL F 12 0 SHEET 2 AC2 5 THR F 122 VAL F 126 1 O THR F 125 N VAL F 12 SHEET 3 AC2 5 ALA F 95 TYR F 97 -1 N ALA F 95 O VAL F 124 SHEET 4 AC2 5 ARG F 40 SER F 42 -1 N GLN F 41 O VAL F 96 SHEET 5 AC2 5 GLY F 46 GLU F 48 -1 O GLY F 46 N SER F 42 SHEET 1 AC3 3 ALA F 35 ASN F 37 0 SHEET 2 AC3 3 ALA F 100 GLU F 103 -1 O GLU F 102 N ALA F 35 SHEET 3 AC3 3 GLY F 114 TRP F 118 -1 O ASP F 116 N ARG F 101 SHEET 1 AC4 2 THR F 53 TYR F 55 0 SHEET 2 AC4 2 TRP F 59 ASN F 61 -1 O TYR F 60 N TYR F 54 SHEET 1 AC5 3 SER F 135 PRO F 138 0 SHEET 2 AC5 3 ALA F 151 TYR F 160 -1 O LEU F 156 N PHE F 137 SHEET 3 AC5 3 TYR F 191 VAL F 199 -1 O VAL F 197 N LEU F 153 SHEET 1 AC6 3 THR F 166 TRP F 169 0 SHEET 2 AC6 3 CYS F 211 HIS F 215 -1 O ASN F 214 N THR F 166 SHEET 3 AC6 3 THR F 220 LYS F 224 -1 O VAL F 222 N VAL F 213 SHEET 1 AC7 5 SER G 9 GLY G 12 0 SHEET 2 AC7 5 THR G 103 VAL G 107 1 O LYS G 104 N VAL G 10 SHEET 3 AC7 5 ASN G 87 TYR G 93 -1 N TYR G 88 O THR G 103 SHEET 4 AC7 5 ILE G 35 GLN G 40 -1 N SER G 36 O SER G 91 SHEET 5 AC7 5 LYS G 47 TYR G 51 -1 O ILE G 50 N TRP G 37 SHEET 1 AC8 4 SER G 9 GLY G 12 0 SHEET 2 AC8 4 THR G 103 VAL G 107 1 O LYS G 104 N VAL G 10 SHEET 3 AC8 4 ASN G 87 TYR G 93 -1 N TYR G 88 O THR G 103 SHEET 4 AC8 4 ILE G 97 PHE G 99 -1 O SER G 98 N SER G 92 SHEET 1 AC9 3 THR G 19 THR G 23 0 SHEET 2 AC9 3 THR G 72 THR G 76 -1 O ALA G 73 N CYS G 22 SHEET 3 AC9 3 SER G 65 SER G 69 -1 N SER G 65 O THR G 76 SHEET 1 AD1 4 THR G 115 THR G 117 0 SHEET 2 AD1 4 ALA G 131 PHE G 140 -1 O LEU G 136 N THR G 117 SHEET 3 AD1 4 TYR G 173 LEU G 181 -1 O SER G 177 N CYS G 135 SHEET 4 AD1 4 VAL G 160 THR G 162 -1 N GLU G 161 O TYR G 178 SHEET 1 AD2 4 THR G 115 THR G 117 0 SHEET 2 AD2 4 ALA G 131 PHE G 140 -1 O LEU G 136 N THR G 117 SHEET 3 AD2 4 TYR G 173 LEU G 181 -1 O SER G 177 N CYS G 135 SHEET 4 AD2 4 SER G 166 LYS G 167 -1 N SER G 166 O ALA G 174 SHEET 1 AD3 4 SER G 154 PRO G 155 0 SHEET 2 AD3 4 VAL G 145 ALA G 151 -1 N ALA G 151 O SER G 154 SHEET 3 AD3 4 TYR G 192 HIS G 198 -1 O GLN G 195 N ALA G 148 SHEET 4 AD3 4 SER G 201 VAL G 207 -1 O VAL G 207 N TYR G 192 SSBOND 1 CYS A 336 CYS A 361 1555 1555 2.03 SSBOND 2 CYS A 379 CYS A 432 1555 1555 2.03 SSBOND 3 CYS A 480 CYS A 488 1555 1555 2.03 SSBOND 4 CYS B 336 CYS B 361 1555 1555 2.03 SSBOND 5 CYS B 379 CYS B 432 1555 1555 2.03 SSBOND 6 CYS B 480 CYS B 488 1555 1555 2.03 SSBOND 7 CYS D 22 CYS D 99 1555 1555 2.03 SSBOND 8 CYS D 155 CYS D 211 1555 1555 2.03 SSBOND 9 CYS E 22 CYS E 90 1555 1555 2.03 SSBOND 10 CYS E 135 CYS E 194 1555 1555 2.03 SSBOND 11 CYS F 22 CYS F 99 1555 1555 2.04 SSBOND 12 CYS F 155 CYS F 211 1555 1555 2.03 SSBOND 13 CYS G 22 CYS G 90 1555 1555 2.03 SSBOND 14 CYS G 135 CYS G 194 1555 1555 2.03 LINK ND2 ASN A 343 C1 NAG A 601 1555 1555 1.43 LINK ND2 ASN B 343 C1 NAG H 1 1555 1555 1.44 LINK O4 NAG H 1 C1 NAG H 2 1555 1555 1.45 CISPEP 1 TYR E 141 PRO E 142 0 -1.64 CISPEP 2 TYR G 141 PRO G 142 0 -3.41 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 CONECT 22 229 CONECT 79 9735 CONECT 229 22 CONECT 369 782 CONECT 782 369 CONECT 1173 1230 CONECT 1230 1173 CONECT 1531 1738 CONECT 1588 9707 CONECT 1738 1531 CONECT 1878 2291 CONECT 2291 1878 CONECT 2682 2739 CONECT 2739 2682 CONECT 3206 3828 CONECT 3828 3206 CONECT 4239 4653 CONECT 4653 4239 CONECT 4937 5460 CONECT 5460 4937 CONECT 5782 6236 CONECT 6236 5782 CONECT 6536 7158 CONECT 7158 6536 CONECT 7569 7983 CONECT 7983 7569 CONECT 8267 8790 CONECT 8790 8267 CONECT 9112 9566 CONECT 9566 9112 CONECT 9707 1588 9708 9718 CONECT 9708 9707 9709 9715 CONECT 9709 9708 9710 9716 CONECT 9710 9709 9711 9717 CONECT 9711 9710 9712 9718 CONECT 9712 9711 9719 CONECT 9713 9714 9715 9720 CONECT 9714 9713 CONECT 9715 9708 9713 CONECT 9716 9709 CONECT 9717 9710 9721 CONECT 9718 9707 9711 CONECT 9719 9712 CONECT 9720 9713 CONECT 9721 9717 9722 9732 CONECT 9722 9721 9723 9729 CONECT 9723 9722 9724 9730 CONECT 9724 9723 9725 9731 CONECT 9725 9724 9726 9732 CONECT 9726 9725 9733 CONECT 9727 9728 9729 9734 CONECT 9728 9727 CONECT 9729 9722 9727 CONECT 9730 9723 CONECT 9731 9724 CONECT 9732 9721 9725 CONECT 9733 9726 CONECT 9734 9727 CONECT 9735 79 9736 9746 CONECT 9736 9735 9737 9743 CONECT 9737 9736 9738 9744 CONECT 9738 9737 9739 9745 CONECT 9739 9738 9740 9746 CONECT 9740 9739 9747 CONECT 9741 9742 9743 9748 CONECT 9742 9741 CONECT 9743 9736 9741 CONECT 9744 9737 CONECT 9745 9738 CONECT 9746 9735 9739 CONECT 9747 9740 CONECT 9748 9741 MASTER 189 0 3 24 103 0 0 6 9742 6 72 104 END