HEADER IMMUNE SYSTEM 22-OCT-25 9YUE TITLE 14-3-3E HOMODIMER IN THE PYRIN INHIBITED COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: 14-3-3 PROTEIN EPSILON; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: 14-3-3E; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: YWHAE; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS PROTEIN COMPLEX, IMMUNE SYSTEM EXPDTA ELECTRON MICROSCOPY AUTHOR L.LIU,H.WU REVDAT 1 04-NOV-26 9YUE 0 JRNL AUTH L.LIU,H.WU JRNL TITL IMMUNE REGULATORY DIMER COMPLEX JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.87 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CRYOSPARC, CRYOSPARC REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.870 REMARK 3 NUMBER OF PARTICLES : 37559 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9YUE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-OCT-25. REMARK 100 THE DEPOSITION ID IS D_1000301365. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : 1433E DIMER REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 (6K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 800.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O MET A 88 OE1 GLU A 92 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU B 18 -147.25 59.24 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-73504 RELATED DB: EMDB REMARK 900 IMMUNE REGULATORY COMPLEX DBREF 9YUE A 1 233 UNP P62258 1433E_HUMAN 1 233 DBREF 9YUE B 1 233 UNP P62258 1433E_HUMAN 1 233 SEQRES 1 A 233 MET ASP ASP ARG GLU ASP LEU VAL TYR GLN ALA LYS LEU SEQRES 2 A 233 ALA GLU GLN ALA GLU ARG TYR ASP GLU MET VAL GLU SER SEQRES 3 A 233 MET LYS LYS VAL ALA GLY MET ASP VAL GLU LEU THR VAL SEQRES 4 A 233 GLU GLU ARG ASN LEU LEU SER VAL ALA TYR LYS ASN VAL SEQRES 5 A 233 ILE GLY ALA ARG ARG ALA SER TRP ARG ILE ILE SER SER SEQRES 6 A 233 ILE GLU GLN LYS GLU GLU ASN LYS GLY GLY GLU ASP LYS SEQRES 7 A 233 LEU LYS MET ILE ARG GLU TYR ARG GLN MET VAL GLU THR SEQRES 8 A 233 GLU LEU LYS LEU ILE CYS CYS ASP ILE LEU ASP VAL LEU SEQRES 9 A 233 ASP LYS HIS LEU ILE PRO ALA ALA ASN THR GLY GLU SER SEQRES 10 A 233 LYS VAL PHE TYR TYR LYS MET LYS GLY ASP TYR HIS ARG SEQRES 11 A 233 TYR LEU ALA GLU PHE ALA THR GLY ASN ASP ARG LYS GLU SEQRES 12 A 233 ALA ALA GLU ASN SER LEU VAL ALA TYR LYS ALA ALA SER SEQRES 13 A 233 ASP ILE ALA MET THR GLU LEU PRO PRO THR HIS PRO ILE SEQRES 14 A 233 ARG LEU GLY LEU ALA LEU ASN PHE SER VAL PHE TYR TYR SEQRES 15 A 233 GLU ILE LEU ASN SER PRO ASP ARG ALA CYS ARG LEU ALA SEQRES 16 A 233 LYS ALA ALA PHE ASP ASP ALA ILE ALA GLU LEU ASP THR SEQRES 17 A 233 LEU SER GLU GLU SER TYR LYS ASP SER THR LEU ILE MET SEQRES 18 A 233 GLN LEU LEU ARG ASP ASN LEU THR LEU TRP THR SER SEQRES 1 B 233 MET ASP ASP ARG GLU ASP LEU VAL TYR GLN ALA LYS LEU SEQRES 2 B 233 ALA GLU GLN ALA GLU ARG TYR ASP GLU MET VAL GLU SER SEQRES 3 B 233 MET LYS LYS VAL ALA GLY MET ASP VAL GLU LEU THR VAL SEQRES 4 B 233 GLU GLU ARG ASN LEU LEU SER VAL ALA TYR LYS ASN VAL SEQRES 5 B 233 ILE GLY ALA ARG ARG ALA SER TRP ARG ILE ILE SER SER SEQRES 6 B 233 ILE GLU GLN LYS GLU GLU ASN LYS GLY GLY GLU ASP LYS SEQRES 7 B 233 LEU LYS MET ILE ARG GLU TYR ARG GLN MET VAL GLU THR SEQRES 8 B 233 GLU LEU LYS LEU ILE CYS CYS ASP ILE LEU ASP VAL LEU SEQRES 9 B 233 ASP LYS HIS LEU ILE PRO ALA ALA ASN THR GLY GLU SER SEQRES 10 B 233 LYS VAL PHE TYR TYR LYS MET LYS GLY ASP TYR HIS ARG SEQRES 11 B 233 TYR LEU ALA GLU PHE ALA THR GLY ASN ASP ARG LYS GLU SEQRES 12 B 233 ALA ALA GLU ASN SER LEU VAL ALA TYR LYS ALA ALA SER SEQRES 13 B 233 ASP ILE ALA MET THR GLU LEU PRO PRO THR HIS PRO ILE SEQRES 14 B 233 ARG LEU GLY LEU ALA LEU ASN PHE SER VAL PHE TYR TYR SEQRES 15 B 233 GLU ILE LEU ASN SER PRO ASP ARG ALA CYS ARG LEU ALA SEQRES 16 B 233 LYS ALA ALA PHE ASP ASP ALA ILE ALA GLU LEU ASP THR SEQRES 17 B 233 LEU SER GLU GLU SER TYR LYS ASP SER THR LEU ILE MET SEQRES 18 B 233 GLN LEU LEU ARG ASP ASN LEU THR LEU TRP THR SER HELIX 1 AA1 ASP A 2 GLU A 18 1 17 HELIX 2 AA2 ARG A 19 GLY A 32 1 14 HELIX 3 AA3 THR A 38 GLU A 71 1 34 HELIX 4 AA4 GLY A 75 ALA A 112 1 38 HELIX 5 AA5 THR A 114 GLU A 134 1 21 HELIX 6 AA6 PHE A 135 THR A 137 5 3 HELIX 7 AA7 GLY A 138 LEU A 163 1 26 HELIX 8 AA8 HIS A 167 LEU A 185 1 19 HELIX 9 AA9 SER A 187 ALA A 204 1 18 HELIX 10 AB1 GLU A 205 LEU A 209 5 5 HELIX 11 AB2 SER A 210 SER A 233 1 24 HELIX 12 AB3 ASP B 3 ALA B 17 1 15 HELIX 13 AB4 ARG B 19 GLY B 32 1 14 HELIX 14 AB5 THR B 38 ASN B 72 1 35 HELIX 15 AB6 GLY B 75 ALA B 112 1 38 HELIX 16 AB7 THR B 114 GLU B 134 1 21 HELIX 17 AB8 PHE B 135 THR B 137 5 3 HELIX 18 AB9 GLY B 138 LEU B 163 1 26 HELIX 19 AC1 HIS B 167 ILE B 184 1 18 HELIX 20 AC2 SER B 187 ALA B 204 1 18 HELIX 21 AC3 GLU B 205 LEU B 209 5 5 HELIX 22 AC4 SER B 210 SER B 233 1 24 CISPEP 1 LYS A 215 ASP A 216 0 22.70 CISPEP 2 LYS B 215 ASP B 216 0 15.81 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MASTER 127 0 0 22 0 0 0 6 3738 2 0 36 END