data_9YYG # _entry.id 9YYG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.416 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9YYG pdb_00009yyg 10.2210/pdb9yyg/pdb WWPDB D_1000301627 ? ? EMDB EMD-73644 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2026-07-15 ? 2 'EM metadata' 1 0 2026-07-15 ? 3 'Half map' 1 0 2026-07-15 1 4 'Half map' 1 0 2026-07-15 2 5 Image 1 0 2026-07-15 ? 6 'Primary map' 1 0 2026-07-15 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? 3 3 'Half map' repository 'Initial release' ? ? 4 4 'Half map' repository 'Initial release' ? ? 5 5 Image repository 'Initial release' ? ? 6 6 'Primary map' repository 'Initial release' ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9YYG _pdbx_database_status.recvd_initial_deposition_date 2025-10-29 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'AI-generated RNA-guided nuclease TAM-bound state' _pdbx_database_related.db_id EMD-73644 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 3 _pdbx_contact_author.email doudna@berkeley.edu _pdbx_contact_author.name_first Jennifer _pdbx_contact_author.name_last Doudna _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-9161-999X # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Skopintsev, P.' 1 0000-0002-6043-157X 'Esain-Garcia, I.' 2 0000-0003-1931-4563 'Doudna, J.' 3 0000-0001-9161-999X # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'AI-generated RNA-guided nuclease TAM-bound state' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Skopintsev, P.' 1 0000-0002-6043-157X primary 'Esain-Garcia, I.' 2 0000-0003-1931-4563 primary 'Doudna, J.' 3 0000-0001-9161-999X # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'AI-designed RNA-guided nuclease' 46649.828 1 3.1.-.- ? ? ? 2 polymer man 'RNA (116-MER)' 42598.207 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(*GP*GP*TP*TP*GP*AP*TP*C)-3') ; 2456.639 1 ? ? ? ? 4 polymer syn ;DNA (5'-D(*AP*CP*AP*TP*CP*AP*AP*CP*C)-3') ; 2698.812 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MIHRKAFVVRLYPNARQEELIERTLGSARFVYNHFLAERKAAYKESGKPLTYGQMSSLLTKLKQAPETAWLSEVDKFALQ NSLKNLERAFQNFFRTLKKKGEKVGFPKFRKKKTGESFRTQFTNNNIQIGKGKLKLPKLGWVKTKGQQEIKGKVLNVTVK RVHEGHYEASVLVEVEIPELPEAPLLAAGVDLGIKNFAVVTDGEEFEKVENPKFLKKTEKRLARAQRRLSRRKKGSARWE KARTRLARIHKRIVNQRQDFLHKLTTGLVKTYQIIAVEDLNPKNMMKNHHLARAISDAAWGEFRRQLEYKAEWYGRTVAK VSRWFPSSQLCHVCGHKNPEVKDLSVRTWTCPSCGTTHDRDENAALNIRREALVAAGISDTLNAHGGYVRPASAGNGLRS ENHATLVV ; ;MIHRKAFVVRLYPNARQEELIERTLGSARFVYNHFLAERKAAYKESGKPLTYGQMSSLLTKLKQAPETAWLSEVDKFALQ NSLKNLERAFQNFFRTLKKKGEKVGFPKFRKKKTGESFRTQFTNNNIQIGKGKLKLPKLGWVKTKGQQEIKGKVLNVTVK RVHEGHYEASVLVEVEIPELPEAPLLAAGVDLGIKNFAVVTDGEEFEKVENPKFLKKTEKRLARAQRRLSRRKKGSARWE KARTRLARIHKRIVNQRQDFLHKLTTGLVKTYQIIAVEDLNPKNMMKNHHLARAISDAAWGEFRRQLEYKAEWYGRTVAK VSRWFPSSQLCHVCGHKNPEVKDLSVRTWTCPSCGTTHDRDENAALNIRREALVAAGISDTLNAHGGYVRPASAGNGLRS ENHATLVV ; A ? 2 polyribonucleotide no no ;GGUGGCUGCGGGAAUCUCAGACACCUUAAACGCUCAUGGAGGCUAUGUCAGACCUGCUUCGGCGGGCAAUGGUCUGCGAA GUGAGAAUCACGCGACUUUAGUCGUGUGAGGUUCAAGAGUCCCUUGGCGCCC ; ;GGUGGCUGCGGGAAUCUCAGACACCUUAAACGCUCAUGGAGGCUAUGUCAGACCUGCUUCGGCGGGCAAUGGUCUGCGAA GUGAGAAUCACGCGACUUUAGUCGUGUGAGGUUCAAGAGUCCCUUGGCGCCC ; B ? 3 polydeoxyribonucleotide no no '(DT)(DA)(DT)(DT)(DG)(DA)(DT)(DG)' TATTGATG C ? 4 polydeoxyribonucleotide no no '(DT)(DC)(DA)(DT)(DC)(DA)(DA)(DT)(DA)' TCATCAATA D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ILE n 1 3 HIS n 1 4 ARG n 1 5 LYS n 1 6 ALA n 1 7 PHE n 1 8 VAL n 1 9 VAL n 1 10 ARG n 1 11 LEU n 1 12 TYR n 1 13 PRO n 1 14 ASN n 1 15 ALA n 1 16 ARG n 1 17 GLN n 1 18 GLU n 1 19 GLU n 1 20 LEU n 1 21 ILE n 1 22 GLU n 1 23 ARG n 1 24 THR n 1 25 LEU n 1 26 GLY n 1 27 SER n 1 28 ALA n 1 29 ARG n 1 30 PHE n 1 31 VAL n 1 32 TYR n 1 33 ASN n 1 34 HIS n 1 35 PHE n 1 36 LEU n 1 37 ALA n 1 38 GLU n 1 39 ARG n 1 40 LYS n 1 41 ALA n 1 42 ALA n 1 43 TYR n 1 44 LYS n 1 45 GLU n 1 46 SER n 1 47 GLY n 1 48 LYS n 1 49 PRO n 1 50 LEU n 1 51 THR n 1 52 TYR n 1 53 GLY n 1 54 GLN n 1 55 MET n 1 56 SER n 1 57 SER n 1 58 LEU n 1 59 LEU n 1 60 THR n 1 61 LYS n 1 62 LEU n 1 63 LYS n 1 64 GLN n 1 65 ALA n 1 66 PRO n 1 67 GLU n 1 68 THR n 1 69 ALA n 1 70 TRP n 1 71 LEU n 1 72 SER n 1 73 GLU n 1 74 VAL n 1 75 ASP n 1 76 LYS n 1 77 PHE n 1 78 ALA n 1 79 LEU n 1 80 GLN n 1 81 ASN n 1 82 SER n 1 83 LEU n 1 84 LYS n 1 85 ASN n 1 86 LEU n 1 87 GLU n 1 88 ARG n 1 89 ALA n 1 90 PHE n 1 91 GLN n 1 92 ASN n 1 93 PHE n 1 94 PHE n 1 95 ARG n 1 96 THR n 1 97 LEU n 1 98 LYS n 1 99 LYS n 1 100 LYS n 1 101 GLY n 1 102 GLU n 1 103 LYS n 1 104 VAL n 1 105 GLY n 1 106 PHE n 1 107 PRO n 1 108 LYS n 1 109 PHE n 1 110 ARG n 1 111 LYS n 1 112 LYS n 1 113 LYS n 1 114 THR n 1 115 GLY n 1 116 GLU n 1 117 SER n 1 118 PHE n 1 119 ARG n 1 120 THR n 1 121 GLN n 1 122 PHE n 1 123 THR n 1 124 ASN n 1 125 ASN n 1 126 ASN n 1 127 ILE n 1 128 GLN n 1 129 ILE n 1 130 GLY n 1 131 LYS n 1 132 GLY n 1 133 LYS n 1 134 LEU n 1 135 LYS n 1 136 LEU n 1 137 PRO n 1 138 LYS n 1 139 LEU n 1 140 GLY n 1 141 TRP n 1 142 VAL n 1 143 LYS n 1 144 THR n 1 145 LYS n 1 146 GLY n 1 147 GLN n 1 148 GLN n 1 149 GLU n 1 150 ILE n 1 151 LYS n 1 152 GLY n 1 153 LYS n 1 154 VAL n 1 155 LEU n 1 156 ASN n 1 157 VAL n 1 158 THR n 1 159 VAL n 1 160 LYS n 1 161 ARG n 1 162 VAL n 1 163 HIS n 1 164 GLU n 1 165 GLY n 1 166 HIS n 1 167 TYR n 1 168 GLU n 1 169 ALA n 1 170 SER n 1 171 VAL n 1 172 LEU n 1 173 VAL n 1 174 GLU n 1 175 VAL n 1 176 GLU n 1 177 ILE n 1 178 PRO n 1 179 GLU n 1 180 LEU n 1 181 PRO n 1 182 GLU n 1 183 ALA n 1 184 PRO n 1 185 LEU n 1 186 LEU n 1 187 ALA n 1 188 ALA n 1 189 GLY n 1 190 VAL n 1 191 ASP n 1 192 LEU n 1 193 GLY n 1 194 ILE n 1 195 LYS n 1 196 ASN n 1 197 PHE n 1 198 ALA n 1 199 VAL n 1 200 VAL n 1 201 THR n 1 202 ASP n 1 203 GLY n 1 204 GLU n 1 205 GLU n 1 206 PHE n 1 207 GLU n 1 208 LYS n 1 209 VAL n 1 210 GLU n 1 211 ASN n 1 212 PRO n 1 213 LYS n 1 214 PHE n 1 215 LEU n 1 216 LYS n 1 217 LYS n 1 218 THR n 1 219 GLU n 1 220 LYS n 1 221 ARG n 1 222 LEU n 1 223 ALA n 1 224 ARG n 1 225 ALA n 1 226 GLN n 1 227 ARG n 1 228 ARG n 1 229 LEU n 1 230 SER n 1 231 ARG n 1 232 ARG n 1 233 LYS n 1 234 LYS n 1 235 GLY n 1 236 SER n 1 237 ALA n 1 238 ARG n 1 239 TRP n 1 240 GLU n 1 241 LYS n 1 242 ALA n 1 243 ARG n 1 244 THR n 1 245 ARG n 1 246 LEU n 1 247 ALA n 1 248 ARG n 1 249 ILE n 1 250 HIS n 1 251 LYS n 1 252 ARG n 1 253 ILE n 1 254 VAL n 1 255 ASN n 1 256 GLN n 1 257 ARG n 1 258 GLN n 1 259 ASP n 1 260 PHE n 1 261 LEU n 1 262 HIS n 1 263 LYS n 1 264 LEU n 1 265 THR n 1 266 THR n 1 267 GLY n 1 268 LEU n 1 269 VAL n 1 270 LYS n 1 271 THR n 1 272 TYR n 1 273 GLN n 1 274 ILE n 1 275 ILE n 1 276 ALA n 1 277 VAL n 1 278 GLU n 1 279 ASP n 1 280 LEU n 1 281 ASN n 1 282 PRO n 1 283 LYS n 1 284 ASN n 1 285 MET n 1 286 MET n 1 287 LYS n 1 288 ASN n 1 289 HIS n 1 290 HIS n 1 291 LEU n 1 292 ALA n 1 293 ARG n 1 294 ALA n 1 295 ILE n 1 296 SER n 1 297 ASP n 1 298 ALA n 1 299 ALA n 1 300 TRP n 1 301 GLY n 1 302 GLU n 1 303 PHE n 1 304 ARG n 1 305 ARG n 1 306 GLN n 1 307 LEU n 1 308 GLU n 1 309 TYR n 1 310 LYS n 1 311 ALA n 1 312 GLU n 1 313 TRP n 1 314 TYR n 1 315 GLY n 1 316 ARG n 1 317 THR n 1 318 VAL n 1 319 ALA n 1 320 LYS n 1 321 VAL n 1 322 SER n 1 323 ARG n 1 324 TRP n 1 325 PHE n 1 326 PRO n 1 327 SER n 1 328 SER n 1 329 GLN n 1 330 LEU n 1 331 CYS n 1 332 HIS n 1 333 VAL n 1 334 CYS n 1 335 GLY n 1 336 HIS n 1 337 LYS n 1 338 ASN n 1 339 PRO n 1 340 GLU n 1 341 VAL n 1 342 LYS n 1 343 ASP n 1 344 LEU n 1 345 SER n 1 346 VAL n 1 347 ARG n 1 348 THR n 1 349 TRP n 1 350 THR n 1 351 CYS n 1 352 PRO n 1 353 SER n 1 354 CYS n 1 355 GLY n 1 356 THR n 1 357 THR n 1 358 HIS n 1 359 ASP n 1 360 ARG n 1 361 ASP n 1 362 GLU n 1 363 ASN n 1 364 ALA n 1 365 ALA n 1 366 LEU n 1 367 ASN n 1 368 ILE n 1 369 ARG n 1 370 ARG n 1 371 GLU n 1 372 ALA n 1 373 LEU n 1 374 VAL n 1 375 ALA n 1 376 ALA n 1 377 GLY n 1 378 ILE n 1 379 SER n 1 380 ASP n 1 381 THR n 1 382 LEU n 1 383 ASN n 1 384 ALA n 1 385 HIS n 1 386 GLY n 1 387 GLY n 1 388 TYR n 1 389 VAL n 1 390 ARG n 1 391 PRO n 1 392 ALA n 1 393 SER n 1 394 ALA n 1 395 GLY n 1 396 ASN n 1 397 GLY n 1 398 LEU n 1 399 ARG n 1 400 SER n 1 401 GLU n 1 402 ASN n 1 403 HIS n 1 404 ALA n 1 405 THR n 1 406 LEU n 1 407 VAL n 1 408 VAL n 2 1 G n 2 2 G n 2 3 U n 2 4 G n 2 5 G n 2 6 C n 2 7 U n 2 8 G n 2 9 C n 2 10 G n 2 11 G n 2 12 G n 2 13 A n 2 14 A n 2 15 U n 2 16 C n 2 17 U n 2 18 C n 2 19 A n 2 20 G n 2 21 A n 2 22 C n 2 23 A n 2 24 C n 2 25 C n 2 26 U n 2 27 U n 2 28 A n 2 29 A n 2 30 A n 2 31 C n 2 32 G n 2 33 C n 2 34 U n 2 35 C n 2 36 A n 2 37 U n 2 38 G n 2 39 G n 2 40 A n 2 41 G n 2 42 G n 2 43 C n 2 44 U n 2 45 A n 2 46 U n 2 47 G n 2 48 U n 2 49 C n 2 50 A n 2 51 G n 2 52 A n 2 53 C n 2 54 C n 2 55 U n 2 56 G n 2 57 C n 2 58 U n 2 59 U n 2 60 C n 2 61 G n 2 62 G n 2 63 C n 2 64 G n 2 65 G n 2 66 G n 2 67 C n 2 68 A n 2 69 A n 2 70 U n 2 71 G n 2 72 G n 2 73 U n 2 74 C n 2 75 U n 2 76 G n 2 77 C n 2 78 G n 2 79 A n 2 80 A n 2 81 G n 2 82 U n 2 83 G n 2 84 A n 2 85 G n 2 86 A n 2 87 A n 2 88 U n 2 89 C n 2 90 A n 2 91 C n 2 92 G n 2 93 C n 2 94 G n 2 95 A n 2 96 C n 2 97 U n 2 98 U n 2 99 U n 2 100 A n 2 101 G n 2 102 U n 2 103 C n 2 104 G n 2 105 U n 2 106 G n 2 107 U n 2 108 G n 2 109 A n 2 110 G n 2 111 G n 2 112 U n 2 113 U n 2 114 C n 2 115 A n 2 116 A n 2 117 G n 2 118 A n 2 119 G n 2 120 U n 2 121 C n 2 122 C n 2 123 C n 2 124 U n 2 125 U n 2 126 G n 2 127 G n 2 128 C n 2 129 G n 2 130 C n 2 131 C n 2 132 C n 3 1 DT n 3 2 DA n 3 3 DT n 3 4 DT n 3 5 DG n 3 6 DA n 3 7 DT n 3 8 DG n 4 1 DT n 4 2 DC n 4 3 DA n 4 4 DT n 4 5 DC n 4 6 DA n 4 7 DA n 4 8 DT n 4 9 DA n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 408 ? ? ? ? ? ? ? ? ? 'synthetic construct' 32630 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 132 ? ? ? ? ? ? ? ? ? 'Deinococcus radiodurans' 1299 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 3 1 sample 1 8 'synthetic construct' ? 32630 ? 4 1 sample 1 9 'synthetic construct' ? 32630 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 ILE 2 2 2 ILE ILE A . n A 1 3 HIS 3 3 3 HIS HIS A . n A 1 4 ARG 4 4 4 ARG ARG A . n A 1 5 LYS 5 5 5 LYS LYS A . n A 1 6 ALA 6 6 6 ALA ALA A . n A 1 7 PHE 7 7 7 PHE PHE A . n A 1 8 VAL 8 8 8 VAL VAL A . n A 1 9 VAL 9 9 9 VAL VAL A . n A 1 10 ARG 10 10 10 ARG ARG A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 TYR 12 12 12 TYR TYR A . n A 1 13 PRO 13 13 13 PRO PRO A . n A 1 14 ASN 14 14 14 ASN ASN A . n A 1 15 ALA 15 15 15 ALA ALA A . n A 1 16 ARG 16 16 16 ARG ARG A . n A 1 17 GLN 17 17 17 GLN GLN A . n A 1 18 GLU 18 18 18 GLU GLU A . n A 1 19 GLU 19 19 19 GLU GLU A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 ILE 21 21 21 ILE ILE A . n A 1 22 GLU 22 22 22 GLU GLU A . n A 1 23 ARG 23 23 23 ARG ARG A . n A 1 24 THR 24 24 24 THR THR A . n A 1 25 LEU 25 25 25 LEU LEU A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 SER 27 27 27 SER SER A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 ARG 29 29 29 ARG ARG A . n A 1 30 PHE 30 30 30 PHE PHE A . n A 1 31 VAL 31 31 31 VAL VAL A . n A 1 32 TYR 32 32 32 TYR TYR A . n A 1 33 ASN 33 33 33 ASN ASN A . n A 1 34 HIS 34 34 34 HIS HIS A . n A 1 35 PHE 35 35 35 PHE PHE A . n A 1 36 LEU 36 36 36 LEU LEU A . n A 1 37 ALA 37 37 37 ALA ALA A . n A 1 38 GLU 38 38 38 GLU GLU A . n A 1 39 ARG 39 39 39 ARG ARG A . n A 1 40 LYS 40 40 40 LYS LYS A . n A 1 41 ALA 41 41 41 ALA ALA A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 TYR 43 43 43 TYR TYR A . n A 1 44 LYS 44 44 44 LYS LYS A . n A 1 45 GLU 45 45 45 GLU GLU A . n A 1 46 SER 46 46 46 SER SER A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 PRO 49 49 49 PRO PRO A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 THR 51 51 51 THR THR A . n A 1 52 TYR 52 52 52 TYR TYR A . n A 1 53 GLY 53 53 53 GLY GLY A . n A 1 54 GLN 54 54 54 GLN GLN A . n A 1 55 MET 55 55 55 MET MET A . n A 1 56 SER 56 56 56 SER SER A . n A 1 57 SER 57 57 57 SER SER A . n A 1 58 LEU 58 58 58 LEU LEU A . n A 1 59 LEU 59 59 59 LEU LEU A . n A 1 60 THR 60 60 60 THR THR A . n A 1 61 LYS 61 61 61 LYS LYS A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 LYS 63 63 63 LYS LYS A . n A 1 64 GLN 64 64 64 GLN GLN A . n A 1 65 ALA 65 65 65 ALA ALA A . n A 1 66 PRO 66 66 66 PRO PRO A . n A 1 67 GLU 67 67 67 GLU GLU A . n A 1 68 THR 68 68 68 THR THR A . n A 1 69 ALA 69 69 69 ALA ALA A . n A 1 70 TRP 70 70 70 TRP TRP A . n A 1 71 LEU 71 71 71 LEU LEU A . n A 1 72 SER 72 72 72 SER SER A . n A 1 73 GLU 73 73 73 GLU GLU A . n A 1 74 VAL 74 74 74 VAL VAL A . n A 1 75 ASP 75 75 75 ASP ASP A . n A 1 76 LYS 76 76 76 LYS LYS A . n A 1 77 PHE 77 77 77 PHE PHE A . n A 1 78 ALA 78 78 78 ALA ALA A . n A 1 79 LEU 79 79 79 LEU LEU A . n A 1 80 GLN 80 80 80 GLN GLN A . n A 1 81 ASN 81 81 81 ASN ASN A . n A 1 82 SER 82 82 82 SER SER A . n A 1 83 LEU 83 83 83 LEU LEU A . n A 1 84 LYS 84 84 84 LYS LYS A . n A 1 85 ASN 85 85 85 ASN ASN A . n A 1 86 LEU 86 86 86 LEU LEU A . n A 1 87 GLU 87 87 87 GLU GLU A . n A 1 88 ARG 88 88 88 ARG ARG A . n A 1 89 ALA 89 89 89 ALA ALA A . n A 1 90 PHE 90 90 90 PHE PHE A . n A 1 91 GLN 91 91 91 GLN GLN A . n A 1 92 ASN 92 92 92 ASN ASN A . n A 1 93 PHE 93 93 93 PHE PHE A . n A 1 94 PHE 94 94 94 PHE PHE A . n A 1 95 ARG 95 95 95 ARG ARG A . n A 1 96 THR 96 96 96 THR THR A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 LYS 98 98 98 LYS LYS A . n A 1 99 LYS 99 99 99 LYS LYS A . n A 1 100 LYS 100 100 100 LYS LYS A . n A 1 101 GLY 101 101 101 GLY GLY A . n A 1 102 GLU 102 102 102 GLU GLU A . n A 1 103 LYS 103 103 103 LYS LYS A . n A 1 104 VAL 104 104 104 VAL VAL A . n A 1 105 GLY 105 105 105 GLY GLY A . n A 1 106 PHE 106 106 106 PHE PHE A . n A 1 107 PRO 107 107 107 PRO PRO A . n A 1 108 LYS 108 108 108 LYS LYS A . n A 1 109 PHE 109 109 109 PHE PHE A . n A 1 110 ARG 110 110 110 ARG ARG A . n A 1 111 LYS 111 111 111 LYS LYS A . n A 1 112 LYS 112 112 112 LYS LYS A . n A 1 113 LYS 113 113 113 LYS LYS A . n A 1 114 THR 114 114 114 THR THR A . n A 1 115 GLY 115 115 115 GLY GLY A . n A 1 116 GLU 116 116 116 GLU GLU A . n A 1 117 SER 117 117 117 SER SER A . n A 1 118 PHE 118 118 118 PHE PHE A . n A 1 119 ARG 119 119 119 ARG ARG A . n A 1 120 THR 120 120 120 THR THR A . n A 1 121 GLN 121 121 121 GLN GLN A . n A 1 122 PHE 122 122 122 PHE PHE A . n A 1 123 THR 123 123 123 THR THR A . n A 1 124 ASN 124 124 124 ASN ASN A . n A 1 125 ASN 125 125 125 ASN ASN A . n A 1 126 ASN 126 126 126 ASN ASN A . n A 1 127 ILE 127 127 127 ILE ILE A . n A 1 128 GLN 128 128 128 GLN GLN A . n A 1 129 ILE 129 129 129 ILE ILE A . n A 1 130 GLY 130 130 130 GLY GLY A . n A 1 131 LYS 131 131 131 LYS LYS A . n A 1 132 GLY 132 132 132 GLY GLY A . n A 1 133 LYS 133 133 133 LYS LYS A . n A 1 134 LEU 134 134 134 LEU LEU A . n A 1 135 LYS 135 135 135 LYS LYS A . n A 1 136 LEU 136 136 136 LEU LEU A . n A 1 137 PRO 137 137 137 PRO PRO A . n A 1 138 LYS 138 138 138 LYS LYS A . n A 1 139 LEU 139 139 139 LEU LEU A . n A 1 140 GLY 140 140 140 GLY GLY A . n A 1 141 TRP 141 141 141 TRP TRP A . n A 1 142 VAL 142 142 142 VAL VAL A . n A 1 143 LYS 143 143 143 LYS LYS A . n A 1 144 THR 144 144 144 THR THR A . n A 1 145 LYS 145 145 145 LYS LYS A . n A 1 146 GLY 146 146 146 GLY GLY A . n A 1 147 GLN 147 147 147 GLN GLN A . n A 1 148 GLN 148 148 148 GLN GLN A . n A 1 149 GLU 149 149 149 GLU GLU A . n A 1 150 ILE 150 150 150 ILE ILE A . n A 1 151 LYS 151 151 151 LYS LYS A . n A 1 152 GLY 152 152 152 GLY GLY A . n A 1 153 LYS 153 153 153 LYS LYS A . n A 1 154 VAL 154 154 154 VAL VAL A . n A 1 155 LEU 155 155 155 LEU LEU A . n A 1 156 ASN 156 156 156 ASN ASN A . n A 1 157 VAL 157 157 157 VAL VAL A . n A 1 158 THR 158 158 158 THR THR A . n A 1 159 VAL 159 159 159 VAL VAL A . n A 1 160 LYS 160 160 160 LYS LYS A . n A 1 161 ARG 161 161 161 ARG ARG A . n A 1 162 VAL 162 162 162 VAL VAL A . n A 1 163 HIS 163 163 163 HIS HIS A . n A 1 164 GLU 164 164 164 GLU GLU A . n A 1 165 GLY 165 165 165 GLY GLY A . n A 1 166 HIS 166 166 166 HIS HIS A . n A 1 167 TYR 167 167 167 TYR TYR A . n A 1 168 GLU 168 168 168 GLU GLU A . n A 1 169 ALA 169 169 169 ALA ALA A . n A 1 170 SER 170 170 170 SER SER A . n A 1 171 VAL 171 171 171 VAL VAL A . n A 1 172 LEU 172 172 172 LEU LEU A . n A 1 173 VAL 173 173 173 VAL VAL A . n A 1 174 GLU 174 174 174 GLU GLU A . n A 1 175 VAL 175 175 175 VAL VAL A . n A 1 176 GLU 176 176 176 GLU GLU A . n A 1 177 ILE 177 177 177 ILE ILE A . n A 1 178 PRO 178 178 178 PRO PRO A . n A 1 179 GLU 179 179 179 GLU GLU A . n A 1 180 LEU 180 180 180 LEU LEU A . n A 1 181 PRO 181 181 181 PRO PRO A . n A 1 182 GLU 182 182 182 GLU GLU A . n A 1 183 ALA 183 183 183 ALA ALA A . n A 1 184 PRO 184 184 184 PRO PRO A . n A 1 185 LEU 185 185 185 LEU LEU A . n A 1 186 LEU 186 186 186 LEU LEU A . n A 1 187 ALA 187 187 187 ALA ALA A . n A 1 188 ALA 188 188 188 ALA ALA A . n A 1 189 GLY 189 189 189 GLY GLY A . n A 1 190 VAL 190 190 190 VAL VAL A . n A 1 191 ASP 191 191 191 ASP ASP A . n A 1 192 LEU 192 192 192 LEU LEU A . n A 1 193 GLY 193 193 193 GLY GLY A . n A 1 194 ILE 194 194 194 ILE ILE A . n A 1 195 LYS 195 195 195 LYS LYS A . n A 1 196 ASN 196 196 196 ASN ASN A . n A 1 197 PHE 197 197 197 PHE PHE A . n A 1 198 ALA 198 198 198 ALA ALA A . n A 1 199 VAL 199 199 199 VAL VAL A . n A 1 200 VAL 200 200 200 VAL VAL A . n A 1 201 THR 201 201 201 THR THR A . n A 1 202 ASP 202 202 202 ASP ASP A . n A 1 203 GLY 203 203 203 GLY GLY A . n A 1 204 GLU 204 204 204 GLU GLU A . n A 1 205 GLU 205 205 205 GLU GLU A . n A 1 206 PHE 206 206 206 PHE PHE A . n A 1 207 GLU 207 207 207 GLU GLU A . n A 1 208 LYS 208 208 208 LYS LYS A . n A 1 209 VAL 209 209 209 VAL VAL A . n A 1 210 GLU 210 210 210 GLU GLU A . n A 1 211 ASN 211 211 211 ASN ASN A . n A 1 212 PRO 212 212 212 PRO PRO A . n A 1 213 LYS 213 213 213 LYS LYS A . n A 1 214 PHE 214 214 214 PHE PHE A . n A 1 215 LEU 215 215 215 LEU LEU A . n A 1 216 LYS 216 216 216 LYS LYS A . n A 1 217 LYS 217 217 217 LYS LYS A . n A 1 218 THR 218 218 218 THR THR A . n A 1 219 GLU 219 219 219 GLU GLU A . n A 1 220 LYS 220 220 220 LYS LYS A . n A 1 221 ARG 221 221 221 ARG ARG A . n A 1 222 LEU 222 222 222 LEU LEU A . n A 1 223 ALA 223 223 223 ALA ALA A . n A 1 224 ARG 224 224 224 ARG ARG A . n A 1 225 ALA 225 225 225 ALA ALA A . n A 1 226 GLN 226 226 226 GLN GLN A . n A 1 227 ARG 227 227 227 ARG ARG A . n A 1 228 ARG 228 228 228 ARG ARG A . n A 1 229 LEU 229 229 229 LEU LEU A . n A 1 230 SER 230 230 230 SER SER A . n A 1 231 ARG 231 231 231 ARG ARG A . n A 1 232 ARG 232 232 232 ARG ARG A . n A 1 233 LYS 233 233 233 LYS LYS A . n A 1 234 LYS 234 234 234 LYS LYS A . n A 1 235 GLY 235 235 235 GLY GLY A . n A 1 236 SER 236 236 236 SER SER A . n A 1 237 ALA 237 237 237 ALA ALA A . n A 1 238 ARG 238 238 238 ARG ARG A . n A 1 239 TRP 239 239 239 TRP TRP A . n A 1 240 GLU 240 240 240 GLU GLU A . n A 1 241 LYS 241 241 241 LYS LYS A . n A 1 242 ALA 242 242 242 ALA ALA A . n A 1 243 ARG 243 243 243 ARG ARG A . n A 1 244 THR 244 244 244 THR THR A . n A 1 245 ARG 245 245 245 ARG ARG A . n A 1 246 LEU 246 246 246 LEU LEU A . n A 1 247 ALA 247 247 247 ALA ALA A . n A 1 248 ARG 248 248 248 ARG ARG A . n A 1 249 ILE 249 249 249 ILE ILE A . n A 1 250 HIS 250 250 250 HIS HIS A . n A 1 251 LYS 251 251 251 LYS LYS A . n A 1 252 ARG 252 252 252 ARG ARG A . n A 1 253 ILE 253 253 253 ILE ILE A . n A 1 254 VAL 254 254 254 VAL VAL A . n A 1 255 ASN 255 255 255 ASN ASN A . n A 1 256 GLN 256 256 256 GLN GLN A . n A 1 257 ARG 257 257 257 ARG ARG A . n A 1 258 GLN 258 258 258 GLN GLN A . n A 1 259 ASP 259 259 259 ASP ASP A . n A 1 260 PHE 260 260 260 PHE PHE A . n A 1 261 LEU 261 261 261 LEU LEU A . n A 1 262 HIS 262 262 262 HIS HIS A . n A 1 263 LYS 263 263 263 LYS LYS A . n A 1 264 LEU 264 264 264 LEU LEU A . n A 1 265 THR 265 265 265 THR THR A . n A 1 266 THR 266 266 266 THR THR A . n A 1 267 GLY 267 267 267 GLY GLY A . n A 1 268 LEU 268 268 268 LEU LEU A . n A 1 269 VAL 269 269 269 VAL VAL A . n A 1 270 LYS 270 270 270 LYS LYS A . n A 1 271 THR 271 271 271 THR THR A . n A 1 272 TYR 272 272 272 TYR TYR A . n A 1 273 GLN 273 273 273 GLN GLN A . n A 1 274 ILE 274 274 274 ILE ILE A . n A 1 275 ILE 275 275 275 ILE ILE A . n A 1 276 ALA 276 276 276 ALA ALA A . n A 1 277 VAL 277 277 277 VAL VAL A . n A 1 278 GLU 278 278 278 GLU GLU A . n A 1 279 ASP 279 279 ? ? ? A . n A 1 280 LEU 280 280 ? ? ? A . n A 1 281 ASN 281 281 ? ? ? A . n A 1 282 PRO 282 282 ? ? ? A . n A 1 283 LYS 283 283 ? ? ? A . n A 1 284 ASN 284 284 ? ? ? A . n A 1 285 MET 285 285 ? ? ? A . n A 1 286 MET 286 286 ? ? ? A . n A 1 287 LYS 287 287 ? ? ? A . n A 1 288 ASN 288 288 ? ? ? A . n A 1 289 HIS 289 289 ? ? ? A . n A 1 290 HIS 290 290 ? ? ? A . n A 1 291 LEU 291 291 ? ? ? A . n A 1 292 ALA 292 292 ? ? ? A . n A 1 293 ARG 293 293 ? ? ? A . n A 1 294 ALA 294 294 ? ? ? A . n A 1 295 ILE 295 295 ? ? ? A . n A 1 296 SER 296 296 ? ? ? A . n A 1 297 ASP 297 297 297 ASP ASP A . n A 1 298 ALA 298 298 298 ALA ALA A . n A 1 299 ALA 299 299 299 ALA ALA A . n A 1 300 TRP 300 300 300 TRP TRP A . n A 1 301 GLY 301 301 301 GLY GLY A . n A 1 302 GLU 302 302 302 GLU GLU A . n A 1 303 PHE 303 303 303 PHE PHE A . n A 1 304 ARG 304 304 304 ARG ARG A . n A 1 305 ARG 305 305 305 ARG ARG A . n A 1 306 GLN 306 306 306 GLN GLN A . n A 1 307 LEU 307 307 307 LEU LEU A . n A 1 308 GLU 308 308 308 GLU GLU A . n A 1 309 TYR 309 309 309 TYR TYR A . n A 1 310 LYS 310 310 310 LYS LYS A . n A 1 311 ALA 311 311 311 ALA ALA A . n A 1 312 GLU 312 312 312 GLU GLU A . n A 1 313 TRP 313 313 313 TRP TRP A . n A 1 314 TYR 314 314 314 TYR TYR A . n A 1 315 GLY 315 315 315 GLY GLY A . n A 1 316 ARG 316 316 316 ARG ARG A . n A 1 317 THR 317 317 317 THR THR A . n A 1 318 VAL 318 318 318 VAL VAL A . n A 1 319 ALA 319 319 319 ALA ALA A . n A 1 320 LYS 320 320 320 LYS LYS A . n A 1 321 VAL 321 321 321 VAL VAL A . n A 1 322 SER 322 322 ? ? ? A . n A 1 323 ARG 323 323 ? ? ? A . n A 1 324 TRP 324 324 ? ? ? A . n A 1 325 PHE 325 325 ? ? ? A . n A 1 326 PRO 326 326 ? ? ? A . n A 1 327 SER 327 327 ? ? ? A . n A 1 328 SER 328 328 ? ? ? A . n A 1 329 GLN 329 329 ? ? ? A . n A 1 330 LEU 330 330 ? ? ? A . n A 1 331 CYS 331 331 ? ? ? A . n A 1 332 HIS 332 332 ? ? ? A . n A 1 333 VAL 333 333 ? ? ? A . n A 1 334 CYS 334 334 ? ? ? A . n A 1 335 GLY 335 335 ? ? ? A . n A 1 336 HIS 336 336 ? ? ? A . n A 1 337 LYS 337 337 ? ? ? A . n A 1 338 ASN 338 338 ? ? ? A . n A 1 339 PRO 339 339 ? ? ? A . n A 1 340 GLU 340 340 ? ? ? A . n A 1 341 VAL 341 341 ? ? ? A . n A 1 342 LYS 342 342 ? ? ? A . n A 1 343 ASP 343 343 ? ? ? A . n A 1 344 LEU 344 344 ? ? ? A . n A 1 345 SER 345 345 ? ? ? A . n A 1 346 VAL 346 346 ? ? ? A . n A 1 347 ARG 347 347 ? ? ? A . n A 1 348 THR 348 348 ? ? ? A . n A 1 349 TRP 349 349 ? ? ? A . n A 1 350 THR 350 350 ? ? ? A . n A 1 351 CYS 351 351 ? ? ? A . n A 1 352 PRO 352 352 ? ? ? A . n A 1 353 SER 353 353 ? ? ? A . n A 1 354 CYS 354 354 ? ? ? A . n A 1 355 GLY 355 355 ? ? ? A . n A 1 356 THR 356 356 ? ? ? A . n A 1 357 THR 357 357 ? ? ? A . n A 1 358 HIS 358 358 ? ? ? A . n A 1 359 ASP 359 359 359 ASP ASP A . n A 1 360 ARG 360 360 360 ARG ARG A . n A 1 361 ASP 361 361 361 ASP ASP A . n A 1 362 GLU 362 362 362 GLU GLU A . n A 1 363 ASN 363 363 363 ASN ASN A . n A 1 364 ALA 364 364 364 ALA ALA A . n A 1 365 ALA 365 365 365 ALA ALA A . n A 1 366 LEU 366 366 366 LEU LEU A . n A 1 367 ASN 367 367 367 ASN ASN A . n A 1 368 ILE 368 368 368 ILE ILE A . n A 1 369 ARG 369 369 369 ARG ARG A . n A 1 370 ARG 370 370 370 ARG ARG A . n A 1 371 GLU 371 371 371 GLU GLU A . n A 1 372 ALA 372 372 372 ALA ALA A . n A 1 373 LEU 373 373 373 LEU LEU A . n A 1 374 VAL 374 374 374 VAL VAL A . n A 1 375 ALA 375 375 375 ALA ALA A . n A 1 376 ALA 376 376 376 ALA ALA A . n A 1 377 GLY 377 377 377 GLY GLY A . n A 1 378 ILE 378 378 ? ? ? A . n A 1 379 SER 379 379 ? ? ? A . n A 1 380 ASP 380 380 ? ? ? A . n A 1 381 THR 381 381 ? ? ? A . n A 1 382 LEU 382 382 ? ? ? A . n A 1 383 ASN 383 383 ? ? ? A . n A 1 384 ALA 384 384 ? ? ? A . n A 1 385 HIS 385 385 ? ? ? A . n A 1 386 GLY 386 386 ? ? ? A . n A 1 387 GLY 387 387 ? ? ? A . n A 1 388 TYR 388 388 ? ? ? A . n A 1 389 VAL 389 389 ? ? ? A . n A 1 390 ARG 390 390 ? ? ? A . n A 1 391 PRO 391 391 ? ? ? A . n A 1 392 ALA 392 392 ? ? ? A . n A 1 393 SER 393 393 ? ? ? A . n A 1 394 ALA 394 394 ? ? ? A . n A 1 395 GLY 395 395 ? ? ? A . n A 1 396 ASN 396 396 ? ? ? A . n A 1 397 GLY 397 397 ? ? ? A . n A 1 398 LEU 398 398 ? ? ? A . n A 1 399 ARG 399 399 ? ? ? A . n A 1 400 SER 400 400 ? ? ? A . n A 1 401 GLU 401 401 ? ? ? A . n A 1 402 ASN 402 402 ? ? ? A . n A 1 403 HIS 403 403 ? ? ? A . n A 1 404 ALA 404 404 ? ? ? A . n A 1 405 THR 405 405 ? ? ? A . n A 1 406 LEU 406 406 ? ? ? A . n A 1 407 VAL 407 407 ? ? ? A . n A 1 408 VAL 408 408 ? ? ? A . n B 2 1 G 1 -115 -115 G G B . n B 2 2 G 2 -114 -114 G G B . n B 2 3 U 3 -113 -113 U U B . n B 2 4 G 4 -112 -112 G G B . n B 2 5 G 5 -111 -111 G G B . n B 2 6 C 6 -110 -110 C C B . n B 2 7 U 7 -109 -109 U U B . n B 2 8 G 8 -108 -108 G G B . n B 2 9 C 9 -107 -107 C C B . n B 2 10 G 10 -106 -106 G G B . n B 2 11 G 11 -105 -105 G G B . n B 2 12 G 12 -104 -104 G G B . n B 2 13 A 13 -103 -103 A A B . n B 2 14 A 14 -102 -102 A A B . n B 2 15 U 15 -101 -101 U U B . n B 2 16 C 16 -100 -100 C C B . n B 2 17 U 17 -99 -99 U U B . n B 2 18 C 18 -98 -98 C C B . n B 2 19 A 19 -97 -97 A A B . n B 2 20 G 20 -96 -96 G G B . n B 2 21 A 21 -95 -95 A A B . n B 2 22 C 22 -94 -94 C C B . n B 2 23 A 23 -93 -93 A A B . n B 2 24 C 24 -92 -92 C C B . n B 2 25 C 25 -91 -91 C C B . n B 2 26 U 26 -90 -90 U U B . n B 2 27 U 27 -89 -89 U U B . n B 2 28 A 28 -88 -88 A A B . n B 2 29 A 29 -87 -87 A A B . n B 2 30 A 30 -86 -86 A A B . n B 2 31 C 31 -85 -85 C C B . n B 2 32 G 32 -84 -84 G G B . n B 2 33 C 33 -83 -83 C C B . n B 2 34 U 34 -82 -82 U U B . n B 2 35 C 35 -81 -81 C C B . n B 2 36 A 36 -80 -80 A A B . n B 2 37 U 37 -79 -79 U U B . n B 2 38 G 38 -78 -78 G G B . n B 2 39 G 39 -77 -77 G G B . n B 2 40 A 40 -76 -76 A A B . n B 2 41 G 41 -75 -75 G G B . n B 2 42 G 42 -74 -74 G G B . n B 2 43 C 43 -73 -73 C C B . n B 2 44 U 44 -72 -72 U U B . n B 2 45 A 45 -71 -71 A A B . n B 2 46 U 46 -70 -70 U U B . n B 2 47 G 47 -69 -69 G G B . n B 2 48 U 48 -68 -68 U U B . n B 2 49 C 49 -67 -67 C C B . n B 2 50 A 50 -66 -66 A A B . n B 2 51 G 51 -65 -65 G G B . n B 2 52 A 52 -64 -64 A A B . n B 2 53 C 53 -63 -63 C C B . n B 2 54 C 54 -62 -62 C C B . n B 2 55 U 55 -61 -61 U U B . n B 2 56 G 56 -60 -60 G G B . n B 2 57 C 57 -59 -59 C C B . n B 2 58 U 58 -58 -58 U U B . n B 2 59 U 59 -57 -57 U U B . n B 2 60 C 60 -56 -56 C C B . n B 2 61 G 61 -55 -55 G G B . n B 2 62 G 62 -54 -54 G G B . n B 2 63 C 63 -53 -53 C C B . n B 2 64 G 64 -52 -52 G G B . n B 2 65 G 65 -51 -51 G G B . n B 2 66 G 66 -50 -50 G G B . n B 2 67 C 67 -49 -49 C C B . n B 2 68 A 68 -48 -48 A A B . n B 2 69 A 69 -47 -47 A A B . n B 2 70 U 70 -46 -46 U U B . n B 2 71 G 71 -45 -45 G G B . n B 2 72 G 72 -44 -44 G G B . n B 2 73 U 73 -43 -43 U U B . n B 2 74 C 74 -42 -42 C C B . n B 2 75 U 75 -41 -41 U U B . n B 2 76 G 76 -40 -40 G G B . n B 2 77 C 77 -39 -39 C C B . n B 2 78 G 78 -38 -38 G G B . n B 2 79 A 79 -37 -37 A A B . n B 2 80 A 80 -36 -36 A A B . n B 2 81 G 81 -35 -35 G G B . n B 2 82 U 82 -34 -34 U U B . n B 2 83 G 83 -33 -33 G G B . n B 2 84 A 84 -32 -32 A A B . n B 2 85 G 85 -31 -31 G G B . n B 2 86 A 86 -30 -30 A A B . n B 2 87 A 87 -29 -29 A A B . n B 2 88 U 88 -28 -28 U U B . n B 2 89 C 89 -27 -27 C C B . n B 2 90 A 90 -26 -26 A A B . n B 2 91 C 91 -25 -25 C C B . n B 2 92 G 92 -24 -24 G G B . n B 2 93 C 93 -23 -23 C C B . n B 2 94 G 94 -22 -22 G G B . n B 2 95 A 95 -21 -21 A A B . n B 2 96 C 96 -20 ? ? ? B . n B 2 97 U 97 -19 ? ? ? B . n B 2 98 U 98 -18 ? ? ? B . n B 2 99 U 99 -17 ? ? ? B . n B 2 100 A 100 -16 ? ? ? B . n B 2 101 G 101 -15 ? ? ? B . n B 2 102 U 102 -14 -14 U U B . n B 2 103 C 103 -13 -13 C C B . n B 2 104 G 104 -12 -12 G G B . n B 2 105 U 105 -11 -11 U U B . n B 2 106 G 106 -10 -10 G G B . n B 2 107 U 107 -9 -9 U U B . n B 2 108 G 108 -8 -8 G G B . n B 2 109 A 109 -7 -7 A A B . n B 2 110 G 110 -6 -6 G G B . n B 2 111 G 111 -5 -5 G G B . n B 2 112 U 112 -4 -4 U U B . n B 2 113 U 113 -3 -3 U U B . n B 2 114 C 114 -2 -2 C C B . n B 2 115 A 115 -1 -1 A A B . n B 2 116 A 116 0 0 A A B . n B 2 117 G 117 1 1 G G B . n B 2 118 A 118 2 2 A A B . n B 2 119 G 119 3 3 G G B . n B 2 120 U 120 4 4 U U B . n B 2 121 C 121 5 5 C C B . n B 2 122 C 122 6 6 C C B . n B 2 123 C 123 7 ? ? ? B . n B 2 124 U 124 8 ? ? ? B . n B 2 125 U 125 9 ? ? ? B . n B 2 126 G 126 10 ? ? ? B . n B 2 127 G 127 11 ? ? ? B . n B 2 128 C 128 12 ? ? ? B . n B 2 129 G 129 13 ? ? ? B . n B 2 130 C 130 14 ? ? ? B . n B 2 131 C 131 15 ? ? ? B . n B 2 132 C 132 16 ? ? ? B . n C 3 1 DT 1 -6 -6 DT DT C . n C 3 2 DA 2 -5 -5 DA DA C . n C 3 3 DT 3 -4 -4 DT DT C . n C 3 4 DT 4 -3 -3 DT DT C . n C 3 5 DG 5 -2 -2 DG DG C . n C 3 6 DA 6 -1 -1 DA DA C . n C 3 7 DT 7 0 0 DT DT C . n C 3 8 DG 8 1 1 DG DG C . n D 4 1 DT 1 -2 -2 DT DT D . n D 4 2 DC 2 -1 -1 DC DC D . n D 4 3 DA 3 0 0 DA DA D . n D 4 4 DT 4 1 1 DT DT D . n D 4 5 DC 5 2 2 DC DC D . n D 4 6 DA 6 3 3 DA DA D . n D 4 7 DA 7 4 4 DA DA D . n D 4 8 DT 8 5 5 DT DT D . n D 4 9 DA 9 6 6 DA DA D . n # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A SER 46 ? CB ? A SER 46 CB 2 1 Y 1 A SER 46 ? OG ? A SER 46 OG 3 1 Y 1 B C 6 ? "C5'" ? B C 122 "C5'" 4 1 Y 1 B C 6 ? "C4'" ? B C 122 "C4'" 5 1 Y 1 B C 6 ? "O4'" ? B C 122 "O4'" 6 1 Y 1 B C 6 ? "C3'" ? B C 122 "C3'" 7 1 Y 1 B C 6 ? "O3'" ? B C 122 "O3'" 8 1 Y 1 B C 6 ? "C2'" ? B C 122 "C2'" 9 1 Y 1 B C 6 ? "O2'" ? B C 122 "O2'" 10 1 Y 1 B C 6 ? "C1'" ? B C 122 "C1'" 11 1 Y 1 B C 6 ? N1 ? B C 122 N1 12 1 Y 1 B C 6 ? C2 ? B C 122 C2 13 1 Y 1 B C 6 ? O2 ? B C 122 O2 14 1 Y 1 B C 6 ? N3 ? B C 122 N3 15 1 Y 1 B C 6 ? C4 ? B C 122 C4 16 1 Y 1 B C 6 ? N4 ? B C 122 N4 17 1 Y 1 B C 6 ? C5 ? B C 122 C5 18 1 Y 1 B C 6 ? C6 ? B C 122 C6 19 1 Y 1 C DT -6 ? "O5'" ? C DT 1 "O5'" 20 1 Y 1 C DT -6 ? "C5'" ? C DT 1 "C5'" 21 1 Y 1 C DG 1 ? C8 ? C DG 8 C8 22 1 Y 1 C DG 1 ? N7 ? C DG 8 N7 23 1 Y 1 C DG 1 ? C5 ? C DG 8 C5 24 1 Y 1 C DG 1 ? C6 ? C DG 8 C6 25 1 Y 1 C DG 1 ? O6 ? C DG 8 O6 26 1 Y 1 C DG 1 ? N1 ? C DG 8 N1 27 1 Y 1 C DG 1 ? C2 ? C DG 8 C2 28 1 Y 1 C DG 1 ? N2 ? C DG 8 N2 29 1 Y 1 C DG 1 ? N3 ? C DG 8 N3 30 1 Y 1 C DG 1 ? C4 ? C DG 8 C4 31 1 Y 1 D DT -2 ? "O5'" ? D DT 1 "O5'" 32 1 Y 1 D DT -2 ? "C5'" ? D DT 1 "C5'" 33 1 Y 1 D DT -2 ? "C4'" ? D DT 1 "C4'" 34 1 Y 1 D DT -2 ? "O4'" ? D DT 1 "O4'" 35 1 Y 1 D DT -2 ? "C3'" ? D DT 1 "C3'" 36 1 Y 1 D DT -2 ? "C2'" ? D DT 1 "C2'" 37 1 Y 1 D DT -2 ? "C1'" ? D DT 1 "C1'" 38 1 Y 1 D DT -2 ? N1 ? D DT 1 N1 39 1 Y 1 D DT -2 ? C2 ? D DT 1 C2 40 1 Y 1 D DT -2 ? O2 ? D DT 1 O2 41 1 Y 1 D DT -2 ? N3 ? D DT 1 N3 42 1 Y 1 D DT -2 ? C4 ? D DT 1 C4 43 1 Y 1 D DT -2 ? O4 ? D DT 1 O4 44 1 Y 1 D DT -2 ? C5 ? D DT 1 C5 45 1 Y 1 D DT -2 ? C7 ? D DT 1 C7 46 1 Y 1 D DT -2 ? C6 ? D DT 1 C6 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9YYG _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9YYG _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9YYG _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9YYG _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.80 _refine.ls_d_res_low ? _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work ? _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'REAL-SPACE (WEIGHTED MAP SUM AT ATOM CENTERS)' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_Zscore _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.003 ? 6236 ? f_bond_d ? ? ? 'ELECTRON MICROSCOPY' ? 0.565 ? 9035 ? f_angle_d ? ? ? 'ELECTRON MICROSCOPY' ? 17.890 ? 1941 ? f_dihedral_angle_d ? ? ? 'ELECTRON MICROSCOPY' ? 0.035 ? 1089 ? f_chiral_restr ? ? ? 'ELECTRON MICROSCOPY' ? 0.004 ? 666 ? f_plane_restr ? ? ? # _struct.entry_id 9YYG _struct.title 'AI-generated RNA-guided nuclease TAM-bound state' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9YYG _struct_keywords.text ;CRISPR, nuclease, AI, Evolution Scale Modeling, Inverse Folding, ESM-IF1, TnpB, TAM, PAM, spacer, exonuclease, DNA binding protein-DNA complex, enzyme, ribonucleoprotein, RNA, RNA-guided nuclease, Cas12, ISDra2, ESM, RNA BINDING PROTEIN ; _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 9YYG 9YYG ? 1 ? 1 2 GB OV024757.1 2155018471 ? 2 ;GGUGGCUGCGGGAAUCUCAGACACCUUAAACGCUCAUGGAGGCUAUGUCAGACCUGCUUCGGCGGGCAAUGGUCUGCGAA GUGAGAAUCACGCGACUUUAGUCGUGUGAGGUUCAAGAGUCCCUUGGCGCCC ; 2426908 3 PDB 9YYG 9YYG ? 3 ? 1 4 PDB 9YYG 9YYG ? 4 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9YYG A 1 ? 408 ? 9YYG 1 ? 408 ? 1 408 2 2 9YYG B 1 ? 132 ? 2155018471 2426908 ? 2426777 ? -115 16 3 3 9YYG C 1 ? 8 ? 9YYG -6 ? 1 ? -6 1 4 4 9YYG D 1 ? 9 ? 9YYG -2 ? 6 ? -2 6 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN A 14 ? GLU A 45 ? ASN A 14 GLU A 45 1 ? 32 HELX_P HELX_P2 AA2 THR A 51 ? ALA A 65 ? THR A 51 ALA A 65 1 ? 15 HELX_P HELX_P3 AA3 THR A 68 ? VAL A 74 ? THR A 68 VAL A 74 5 ? 7 HELX_P HELX_P4 AA4 ASP A 75 ? LYS A 100 ? ASP A 75 LYS A 100 1 ? 26 HELX_P HELX_P5 AA5 LYS A 213 ? ARG A 232 ? LYS A 213 ARG A 232 1 ? 20 HELX_P HELX_P6 AA6 SER A 236 ? THR A 271 ? SER A 236 THR A 271 1 ? 36 HELX_P HELX_P7 AA7 ALA A 299 ? GLY A 315 ? ALA A 299 GLY A 315 1 ? 17 HELX_P HELX_P8 AA8 ASP A 361 ? GLY A 377 ? ASP A 361 GLY A 377 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? B G 1 N1 ? ? ? 1_555 B C 25 N3 ? ? B G -115 B C -91 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B G 1 N2 ? ? ? 1_555 B C 25 O2 ? ? B G -115 B C -91 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B G 1 O6 ? ? ? 1_555 B C 25 N4 ? ? B G -115 B C -91 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B G 1 N2 ? ? ? 1_555 B U 26 O4 ? ? B G -115 B U -90 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog5 hydrog ? ? B G 2 N1 ? ? ? 1_555 B C 24 N3 ? ? B G -114 B C -92 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B G 2 N2 ? ? ? 1_555 B C 24 O2 ? ? B G -114 B C -92 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B G 2 O6 ? ? ? 1_555 B C 24 N4 ? ? B G -114 B C -92 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B G 2 N2 ? ? ? 1_555 B U 27 O4 ? ? B G -114 B U -89 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog9 hydrog ? ? B U 3 N3 ? ? ? 1_555 B A 23 N1 ? ? B U -113 B A -93 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B U 3 O4 ? ? ? 1_555 B A 23 N6 ? ? B U -113 B A -93 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B G 4 N1 ? ? ? 1_555 B C 22 N3 ? ? B G -112 B C -94 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B G 4 N2 ? ? ? 1_555 B C 22 O2 ? ? B G -112 B C -94 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B G 4 O6 ? ? ? 1_555 B C 22 N4 ? ? B G -112 B C -94 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B G 4 N2 ? ? ? 1_555 B A 30 N1 ? ? B G -112 B A -86 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog15 hydrog ? ? B G 4 N3 ? ? ? 1_555 B A 30 N6 ? ? B G -112 B A -86 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog16 hydrog ? ? B G 5 O6 ? ? ? 1_555 B A 21 N6 ? ? B G -111 B A -95 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog17 hydrog ? ? B G 5 N2 ? ? ? 1_555 B C 31 N3 ? ? B G -111 B C -85 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog18 hydrog ? ? B C 6 N3 ? ? ? 1_555 B G 20 N1 ? ? B C -110 B G -96 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B C 6 N4 ? ? ? 1_555 B G 20 O6 ? ? B C -110 B G -96 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B C 6 O2 ? ? ? 1_555 B G 20 N2 ? ? B C -110 B G -96 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B U 7 N3 ? ? ? 1_555 B A 19 N1 ? ? B U -109 B A -97 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B U 7 O4 ? ? ? 1_555 B A 19 N6 ? ? B U -109 B A -97 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B G 8 N1 ? ? ? 1_555 B C 18 N3 ? ? B G -108 B C -98 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B G 8 N2 ? ? ? 1_555 B C 18 O2 ? ? B G -108 B C -98 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B G 8 O6 ? ? ? 1_555 B C 18 N4 ? ? B G -108 B C -98 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B C 9 N4 ? ? ? 1_555 B U 17 O4 ? ? B C -107 B U -99 1_555 ? ? ? ? ? ? 'C-U MISPAIR' ? ? ? hydrog27 hydrog ? ? B C 9 O2 ? ? ? 1_555 B G 110 N2 ? ? B C -107 B G -6 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog28 hydrog ? ? B G 10 N1 ? ? ? 1_555 B C 16 N3 ? ? B G -106 B C -100 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B G 10 N2 ? ? ? 1_555 B C 16 O2 ? ? B G -106 B C -100 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B G 10 O6 ? ? ? 1_555 B C 16 N4 ? ? B G -106 B C -100 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B G 11 O6 ? ? ? 1_555 B A 115 N6 ? ? B G -105 B A -1 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog32 hydrog ? ? B G 12 N1 ? ? ? 1_555 B C 114 N3 ? ? B G -104 B C -2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B G 12 N2 ? ? ? 1_555 B C 114 O2 ? ? B G -104 B C -2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? B G 12 O6 ? ? ? 1_555 B C 114 N4 ? ? B G -104 B C -2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? B A 13 N1 ? ? ? 1_555 B U 113 N3 ? ? B A -103 B U -3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? B A 13 N6 ? ? ? 1_555 B U 113 O4 ? ? B A -103 B U -3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? B A 14 N1 ? ? ? 1_555 B U 112 N3 ? ? B A -102 B U -4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? B A 14 N6 ? ? ? 1_555 B U 112 O4 ? ? B A -102 B U -4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? B U 15 N3 ? ? ? 1_555 B G 111 O6 ? ? B U -101 B G -5 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog40 hydrog ? ? B U 15 O2 ? ? ? 1_555 B G 111 N1 ? ? B U -101 B G -5 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog41 hydrog ? ? B G 20 N2 ? ? ? 1_555 B G 32 N3 ? ? B G -96 B G -84 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog42 hydrog ? ? B G 20 N3 ? ? ? 1_555 B G 32 N2 ? ? B G -96 B G -84 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog43 hydrog ? ? B A 23 N3 ? ? ? 1_555 B A 29 N6 ? ? B A -93 B A -87 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog44 hydrog ? ? B C 24 O2 ? ? ? 1_555 B A 28 N6 ? ? B C -92 B A -88 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog45 hydrog ? ? B G 32 N1 ? ? ? 1_555 B A 86 N1 ? ? B G -84 B A -30 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog46 hydrog ? ? B G 32 O6 ? ? ? 1_555 B A 86 N6 ? ? B G -84 B A -30 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog47 hydrog ? ? B C 33 N3 ? ? ? 1_555 B G 85 N1 ? ? B C -83 B G -31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? B C 33 N4 ? ? ? 1_555 B G 85 O6 ? ? B C -83 B G -31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? B C 33 O2 ? ? ? 1_555 B G 85 N2 ? ? B C -83 B G -31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? B U 34 N3 ? ? ? 1_555 B A 84 N1 ? ? B U -82 B A -32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? B U 34 O4 ? ? ? 1_555 B A 84 N6 ? ? B U -82 B A -32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? B C 35 N3 ? ? ? 1_555 B G 83 N1 ? ? B C -81 B G -33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? B C 35 N4 ? ? ? 1_555 B G 83 O6 ? ? B C -81 B G -33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? B C 35 O2 ? ? ? 1_555 B G 83 N2 ? ? B C -81 B G -33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? B A 36 N1 ? ? ? 1_555 B U 82 N3 ? ? B A -80 B U -34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? B A 36 N6 ? ? ? 1_555 B U 82 O4 ? ? B A -80 B U -34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? B U 37 N3 ? ? ? 1_555 B G 81 O6 ? ? B U -79 B G -35 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog58 hydrog ? ? B U 37 O2 ? ? ? 1_555 B G 81 N1 ? ? B U -79 B G -35 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog59 hydrog ? ? B G 38 N2 ? ? ? 1_555 B A 80 N7 ? ? B G -78 B A -36 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog60 hydrog ? ? B G 38 N3 ? ? ? 1_555 B A 80 N6 ? ? B G -78 B A -36 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog61 hydrog ? ? B G 39 N2 ? ? ? 1_555 B A 79 N7 ? ? B G -77 B A -37 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog62 hydrog ? ? B G 39 N3 ? ? ? 1_555 B A 79 N6 ? ? B G -77 B A -37 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog63 hydrog ? ? B A 40 N6 ? ? ? 1_555 B G 78 N3 ? ? B A -76 B G -38 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog64 hydrog ? ? B A 40 N7 ? ? ? 1_555 B G 78 N2 ? ? B A -76 B G -38 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog65 hydrog ? ? B G 41 N1 ? ? ? 1_555 B C 74 N3 ? ? B G -75 B C -42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? B G 41 N2 ? ? ? 1_555 B C 74 O2 ? ? B G -75 B C -42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? B G 41 O6 ? ? ? 1_555 B C 74 N4 ? ? B G -75 B C -42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? B G 42 N1 ? ? ? 1_555 B U 73 O2 ? ? B G -74 B U -43 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog69 hydrog ? ? B G 42 O6 ? ? ? 1_555 B U 73 N3 ? ? B G -74 B U -43 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog70 hydrog ? ? B C 43 N3 ? ? ? 1_555 B G 72 N1 ? ? B C -73 B G -44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? B C 43 N4 ? ? ? 1_555 B G 72 O6 ? ? B C -73 B G -44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? B C 43 O2 ? ? ? 1_555 B G 72 N2 ? ? B C -73 B G -44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? B U 44 N3 ? ? ? 1_555 B G 71 O6 ? ? B U -72 B G -45 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog74 hydrog ? ? B U 44 O2 ? ? ? 1_555 B G 71 N1 ? ? B U -72 B G -45 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog75 hydrog ? ? B A 45 N1 ? ? ? 1_555 B U 70 N3 ? ? B A -71 B U -46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? B A 45 N6 ? ? ? 1_555 B U 70 O4 ? ? B A -71 B U -46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? B U 46 N3 ? ? ? 1_555 B A 69 N1 ? ? B U -70 B A -47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? B U 46 O4 ? ? ? 1_555 B A 69 N6 ? ? B U -70 B A -47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? B A 50 N3 ? ? ? 1_555 B G 66 N2 ? ? B A -66 B G -50 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog80 hydrog ? ? B G 51 N1 ? ? ? 1_555 B C 67 N3 ? ? B G -65 B C -49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? B G 51 N2 ? ? ? 1_555 B C 67 O2 ? ? B G -65 B C -49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? B G 51 O6 ? ? ? 1_555 B C 67 N4 ? ? B G -65 B C -49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? B C 53 N3 ? ? ? 1_555 B G 66 N1 ? ? B C -63 B G -50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? B C 53 N4 ? ? ? 1_555 B G 66 O6 ? ? B C -63 B G -50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? B C 53 O2 ? ? ? 1_555 B G 66 N2 ? ? B C -63 B G -50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? B C 54 N3 ? ? ? 1_555 B G 65 N1 ? ? B C -62 B G -51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? B C 54 N4 ? ? ? 1_555 B G 65 O6 ? ? B C -62 B G -51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? B C 54 O2 ? ? ? 1_555 B G 65 N2 ? ? B C -62 B G -51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? B U 55 N3 ? ? ? 1_555 B G 64 O6 ? ? B U -61 B G -52 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog90 hydrog ? ? B U 55 O2 ? ? ? 1_555 B G 64 N1 ? ? B U -61 B G -52 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog91 hydrog ? ? B G 56 N1 ? ? ? 1_555 B C 63 N3 ? ? B G -60 B C -53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? B G 56 N2 ? ? ? 1_555 B C 63 O2 ? ? B G -60 B C -53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? B G 56 O6 ? ? ? 1_555 B C 63 N4 ? ? B G -60 B C -53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog94 hydrog ? ? B C 57 N3 ? ? ? 1_555 B G 62 N1 ? ? B C -59 B G -54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog95 hydrog ? ? B C 57 N4 ? ? ? 1_555 B G 62 O6 ? ? B C -59 B G -54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog96 hydrog ? ? B C 57 O2 ? ? ? 1_555 B G 62 N2 ? ? B C -59 B G -54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog97 hydrog ? ? B U 88 N3 ? ? ? 1_555 B A 109 N1 ? ? B U -28 B A -7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog98 hydrog ? ? B U 88 O4 ? ? ? 1_555 B A 109 N6 ? ? B U -28 B A -7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog99 hydrog ? ? B C 89 N3 ? ? ? 1_555 B G 108 N1 ? ? B C -27 B G -8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog100 hydrog ? ? B C 89 N4 ? ? ? 1_555 B G 108 O6 ? ? B C -27 B G -8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog101 hydrog ? ? B C 89 O2 ? ? ? 1_555 B G 108 N2 ? ? B C -27 B G -8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog102 hydrog ? ? B A 90 N1 ? ? ? 1_555 B U 107 N3 ? ? B A -26 B U -9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog103 hydrog ? ? B A 90 N6 ? ? ? 1_555 B U 107 O4 ? ? B A -26 B U -9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog104 hydrog ? ? B C 91 N3 ? ? ? 1_555 B G 106 N1 ? ? B C -25 B G -10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog105 hydrog ? ? B C 91 N4 ? ? ? 1_555 B G 106 O6 ? ? B C -25 B G -10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog106 hydrog ? ? B C 91 O2 ? ? ? 1_555 B G 106 N2 ? ? B C -25 B G -10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog107 hydrog ? ? B G 92 N1 ? ? ? 1_555 B U 105 O2 ? ? B G -24 B U -11 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog108 hydrog ? ? B G 92 O6 ? ? ? 1_555 B U 105 N3 ? ? B G -24 B U -11 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog109 hydrog ? ? B C 93 N3 ? ? ? 1_555 B G 104 N1 ? ? B C -23 B G -12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog110 hydrog ? ? B C 93 N4 ? ? ? 1_555 B G 104 O6 ? ? B C -23 B G -12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog111 hydrog ? ? B C 93 O2 ? ? ? 1_555 B G 104 N2 ? ? B C -23 B G -12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog112 hydrog ? ? B G 94 N1 ? ? ? 1_555 B C 103 N3 ? ? B G -22 B C -13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog113 hydrog ? ? B G 94 N2 ? ? ? 1_555 B C 103 O2 ? ? B G -22 B C -13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog114 hydrog ? ? B G 94 O6 ? ? ? 1_555 B C 103 N4 ? ? B G -22 B C -13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog115 hydrog ? ? B A 95 N1 ? ? ? 1_555 B U 102 N3 ? ? B A -21 B U -14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog116 hydrog ? ? B A 95 N6 ? ? ? 1_555 B U 102 O4 ? ? B A -21 B U -14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog117 hydrog ? ? B G 117 N1 ? ? ? 1_555 D DC 2 N3 ? ? B G 1 D DC -1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog118 hydrog ? ? B G 117 N2 ? ? ? 1_555 D DC 2 O2 ? ? B G 1 D DC -1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog119 hydrog ? ? B G 117 O6 ? ? ? 1_555 D DC 2 N4 ? ? B G 1 D DC -1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog120 hydrog ? ? C DT 1 N3 ? ? ? 1_555 D DA 9 N1 ? ? C DT -6 D DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog121 hydrog ? ? C DT 1 O4 ? ? ? 1_555 D DA 9 N6 ? ? C DT -6 D DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog122 hydrog ? ? C DA 2 N1 ? ? ? 1_555 D DT 8 N3 ? ? C DA -5 D DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog123 hydrog ? ? C DA 2 N6 ? ? ? 1_555 D DT 8 O4 ? ? C DA -5 D DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog124 hydrog ? ? C DT 3 N3 ? ? ? 1_555 D DA 7 N1 ? ? C DT -4 D DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog125 hydrog ? ? C DT 3 O4 ? ? ? 1_555 D DA 7 N6 ? ? C DT -4 D DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog126 hydrog ? ? C DT 4 N3 ? ? ? 1_555 D DA 6 N1 ? ? C DT -3 D DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog127 hydrog ? ? C DT 4 O4 ? ? ? 1_555 D DA 6 N6 ? ? C DT -3 D DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog128 hydrog ? ? C DG 5 N1 ? ? ? 1_555 D DC 5 N3 ? ? C DG -2 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog129 hydrog ? ? C DG 5 N2 ? ? ? 1_555 D DC 5 O2 ? ? C DG -2 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog130 hydrog ? ? C DG 5 O6 ? ? ? 1_555 D DC 5 N4 ? ? C DG -2 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog131 hydrog ? ? C DA 6 N1 ? ? ? 1_555 D DT 4 N3 ? ? C DA -1 D DT 1 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog132 hydrog ? ? C DT 7 N3 ? ? ? 1_555 D DA 3 N1 ? ? C DT 0 D DA 0 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 7 ? AA2 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? parallel AA2 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLU A 116 ? GLN A 121 ? GLU A 116 GLN A 121 AA1 2 LYS A 153 ? HIS A 163 ? LYS A 153 HIS A 163 AA1 3 HIS A 166 ? GLU A 176 ? HIS A 166 GLU A 176 AA1 4 ILE A 2 ? TYR A 12 ? ILE A 2 TYR A 12 AA1 5 GLY A 140 ? LYS A 145 ? GLY A 140 LYS A 145 AA1 6 LYS A 133 ? LEU A 136 ? LYS A 133 LEU A 136 AA1 7 ILE A 129 ? GLY A 130 ? ILE A 129 GLY A 130 AA2 1 GLU A 207 ? VAL A 209 ? GLU A 207 VAL A 209 AA2 2 ALA A 198 ? THR A 201 ? ALA A 198 THR A 201 AA2 3 LEU A 185 ? ASP A 191 ? LEU A 185 ASP A 191 AA2 4 TYR A 272 ? VAL A 277 ? TYR A 272 VAL A 277 AA2 5 THR A 317 ? LYS A 320 ? THR A 317 LYS A 320 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N THR A 120 ? N THR A 120 O VAL A 157 ? O VAL A 157 AA1 2 3 N LYS A 160 ? N LYS A 160 O GLU A 168 ? O GLU A 168 AA1 3 4 O ALA A 169 ? O ALA A 169 N VAL A 9 ? N VAL A 9 AA1 4 5 N TYR A 12 ? N TYR A 12 O LYS A 143 ? O LYS A 143 AA1 5 6 O VAL A 142 ? O VAL A 142 N LEU A 134 ? N LEU A 134 AA1 6 7 O LYS A 133 ? O LYS A 133 N GLY A 130 ? N GLY A 130 AA2 1 2 O VAL A 209 ? O VAL A 209 N ALA A 198 ? N ALA A 198 AA2 2 3 O THR A 201 ? O THR A 201 N GLY A 189 ? N GLY A 189 AA2 3 4 N ALA A 188 ? N ALA A 188 O ILE A 274 ? O ILE A 274 AA2 4 5 N ILE A 275 ? N ILE A 275 O THR A 317 ? O THR A 317 # _pdbx_entry_details.entry_id 9YYG _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 46 ? ? 57.04 -132.92 2 1 THR A 68 ? ? -96.88 33.60 3 1 ASN A 124 ? ? 58.02 -118.79 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9YYG _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space REAL _em_3d_fitting.ref_protocol OTHER # _em_3d_reconstruction.entry_id 9YYG _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 2.8 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 389833 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 8.0 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source 'MULTIPLE SOURCES' _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'AI-designed RNA-guided nuclease TAM-bound state' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list '1, 2, 3, 4' # _em_imaging.entry_id 9YYG _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode OTHER _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 800 _em_imaging.nominal_defocus_max 2000 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure 'COMA FREE' _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen NITROGEN _em_imaging.objective_aperture ? _em_imaging.microscope_serial_number ? _em_imaging.microscope_version ? # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material GOLD _em_sample_support.grid_mesh_size 300 _em_sample_support.grid_type 'Quantifoil R1.2/1.3' _em_sample_support.details ? _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 9YYG _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity 100 _em_vitrification.temp ? _em_vitrification.chamber_temperature 281 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 9YYG _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASP 279 ? A ASP 279 2 1 Y 1 A LEU 280 ? A LEU 280 3 1 Y 1 A ASN 281 ? A ASN 281 4 1 Y 1 A PRO 282 ? A PRO 282 5 1 Y 1 A LYS 283 ? A LYS 283 6 1 Y 1 A ASN 284 ? A ASN 284 7 1 Y 1 A MET 285 ? A MET 285 8 1 Y 1 A MET 286 ? A MET 286 9 1 Y 1 A LYS 287 ? A LYS 287 10 1 Y 1 A ASN 288 ? A ASN 288 11 1 Y 1 A HIS 289 ? A HIS 289 12 1 Y 1 A HIS 290 ? A HIS 290 13 1 Y 1 A LEU 291 ? A LEU 291 14 1 Y 1 A ALA 292 ? A ALA 292 15 1 Y 1 A ARG 293 ? A ARG 293 16 1 Y 1 A ALA 294 ? A ALA 294 17 1 Y 1 A ILE 295 ? A ILE 295 18 1 Y 1 A SER 296 ? A SER 296 19 1 Y 1 A SER 322 ? A SER 322 20 1 Y 1 A ARG 323 ? A ARG 323 21 1 Y 1 A TRP 324 ? A TRP 324 22 1 Y 1 A PHE 325 ? A PHE 325 23 1 Y 1 A PRO 326 ? A PRO 326 24 1 Y 1 A SER 327 ? A SER 327 25 1 Y 1 A SER 328 ? A SER 328 26 1 Y 1 A GLN 329 ? A GLN 329 27 1 Y 1 A LEU 330 ? A LEU 330 28 1 Y 1 A CYS 331 ? A CYS 331 29 1 Y 1 A HIS 332 ? A HIS 332 30 1 Y 1 A VAL 333 ? A VAL 333 31 1 Y 1 A CYS 334 ? A CYS 334 32 1 Y 1 A GLY 335 ? A GLY 335 33 1 Y 1 A HIS 336 ? A HIS 336 34 1 Y 1 A LYS 337 ? A LYS 337 35 1 Y 1 A ASN 338 ? A ASN 338 36 1 Y 1 A PRO 339 ? A PRO 339 37 1 Y 1 A GLU 340 ? A GLU 340 38 1 Y 1 A VAL 341 ? A VAL 341 39 1 Y 1 A LYS 342 ? A LYS 342 40 1 Y 1 A ASP 343 ? A ASP 343 41 1 Y 1 A LEU 344 ? A LEU 344 42 1 Y 1 A SER 345 ? A SER 345 43 1 Y 1 A VAL 346 ? A VAL 346 44 1 Y 1 A ARG 347 ? A ARG 347 45 1 Y 1 A THR 348 ? A THR 348 46 1 Y 1 A TRP 349 ? A TRP 349 47 1 Y 1 A THR 350 ? A THR 350 48 1 Y 1 A CYS 351 ? A CYS 351 49 1 Y 1 A PRO 352 ? A PRO 352 50 1 Y 1 A SER 353 ? A SER 353 51 1 Y 1 A CYS 354 ? A CYS 354 52 1 Y 1 A GLY 355 ? A GLY 355 53 1 Y 1 A THR 356 ? A THR 356 54 1 Y 1 A THR 357 ? A THR 357 55 1 Y 1 A HIS 358 ? A HIS 358 56 1 Y 1 A ILE 378 ? A ILE 378 57 1 Y 1 A SER 379 ? A SER 379 58 1 Y 1 A ASP 380 ? A ASP 380 59 1 Y 1 A THR 381 ? A THR 381 60 1 Y 1 A LEU 382 ? A LEU 382 61 1 Y 1 A ASN 383 ? A ASN 383 62 1 Y 1 A ALA 384 ? A ALA 384 63 1 Y 1 A HIS 385 ? A HIS 385 64 1 Y 1 A GLY 386 ? A GLY 386 65 1 Y 1 A GLY 387 ? A GLY 387 66 1 Y 1 A TYR 388 ? A TYR 388 67 1 Y 1 A VAL 389 ? A VAL 389 68 1 Y 1 A ARG 390 ? A ARG 390 69 1 Y 1 A PRO 391 ? A PRO 391 70 1 Y 1 A ALA 392 ? A ALA 392 71 1 Y 1 A SER 393 ? A SER 393 72 1 Y 1 A ALA 394 ? A ALA 394 73 1 Y 1 A GLY 395 ? A GLY 395 74 1 Y 1 A ASN 396 ? A ASN 396 75 1 Y 1 A GLY 397 ? A GLY 397 76 1 Y 1 A LEU 398 ? A LEU 398 77 1 Y 1 A ARG 399 ? A ARG 399 78 1 Y 1 A SER 400 ? A SER 400 79 1 Y 1 A GLU 401 ? A GLU 401 80 1 Y 1 A ASN 402 ? A ASN 402 81 1 Y 1 A HIS 403 ? A HIS 403 82 1 Y 1 A ALA 404 ? A ALA 404 83 1 Y 1 A THR 405 ? A THR 405 84 1 Y 1 A LEU 406 ? A LEU 406 85 1 Y 1 A VAL 407 ? A VAL 407 86 1 Y 1 A VAL 408 ? A VAL 408 87 1 Y 1 B C -20 ? B C 96 88 1 Y 1 B U -19 ? B U 97 89 1 Y 1 B U -18 ? B U 98 90 1 Y 1 B U -17 ? B U 99 91 1 Y 1 B A -16 ? B A 100 92 1 Y 1 B G -15 ? B G 101 93 1 Y 1 B C 7 ? B C 123 94 1 Y 1 B U 8 ? B U 124 95 1 Y 1 B U 9 ? B U 125 96 1 Y 1 B G 10 ? B G 126 97 1 Y 1 B G 11 ? B G 127 98 1 Y 1 B C 12 ? B C 128 99 1 Y 1 B G 13 ? B G 129 100 1 Y 1 B C 14 ? B C 130 101 1 Y 1 B C 15 ? B C 131 102 1 Y 1 B C 16 ? B C 132 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 CYS N N N N 146 CYS CA C N R 147 CYS C C N N 148 CYS O O N N 149 CYS CB C N N 150 CYS SG S N N 151 CYS OXT O N N 152 CYS H H N N 153 CYS H2 H N N 154 CYS HA H N N 155 CYS HB2 H N N 156 CYS HB3 H N N 157 CYS HG H N N 158 CYS HXT H N N 159 DA OP3 O N N 160 DA P P N N 161 DA OP1 O N N 162 DA OP2 O N N 163 DA "O5'" O N N 164 DA "C5'" C N N 165 DA "C4'" C N R 166 DA "O4'" O N N 167 DA "C3'" C N S 168 DA "O3'" O N N 169 DA "C2'" C N N 170 DA "C1'" C N R 171 DA N9 N Y N 172 DA C8 C Y N 173 DA N7 N Y N 174 DA C5 C Y N 175 DA C6 C Y N 176 DA N6 N N N 177 DA N1 N Y N 178 DA C2 C Y N 179 DA N3 N Y N 180 DA C4 C Y N 181 DA HOP3 H N N 182 DA HOP2 H N N 183 DA "H5'" H N N 184 DA "H5''" H N N 185 DA "H4'" H N N 186 DA "H3'" H N N 187 DA "HO3'" H N N 188 DA "H2'" H N N 189 DA "H2''" H N N 190 DA "H1'" H N N 191 DA H8 H N N 192 DA H61 H N N 193 DA H62 H N N 194 DA H2 H N N 195 DC OP3 O N N 196 DC P P N N 197 DC OP1 O N N 198 DC OP2 O N N 199 DC "O5'" O N N 200 DC "C5'" C N N 201 DC "C4'" C N R 202 DC "O4'" O N N 203 DC "C3'" C N S 204 DC "O3'" O N N 205 DC "C2'" C N N 206 DC "C1'" C N R 207 DC N1 N N N 208 DC C2 C N N 209 DC O2 O N N 210 DC N3 N N N 211 DC C4 C N N 212 DC N4 N N N 213 DC C5 C N N 214 DC C6 C N N 215 DC HOP3 H N N 216 DC HOP2 H N N 217 DC "H5'" H N N 218 DC "H5''" H N N 219 DC "H4'" H N N 220 DC "H3'" H N N 221 DC "HO3'" H N N 222 DC "H2'" H N N 223 DC "H2''" H N N 224 DC "H1'" H N N 225 DC H41 H N N 226 DC H42 H N N 227 DC H5 H N N 228 DC H6 H N N 229 DG OP3 O N N 230 DG P P N N 231 DG OP1 O N N 232 DG OP2 O N N 233 DG "O5'" O N N 234 DG "C5'" C N N 235 DG "C4'" C N R 236 DG "O4'" O N N 237 DG "C3'" C N S 238 DG "O3'" O N N 239 DG "C2'" C N N 240 DG "C1'" C N R 241 DG N9 N Y N 242 DG C8 C Y N 243 DG N7 N Y N 244 DG C5 C Y N 245 DG C6 C N N 246 DG O6 O N N 247 DG N1 N N N 248 DG C2 C N N 249 DG N2 N N N 250 DG N3 N N N 251 DG C4 C Y N 252 DG HOP3 H N N 253 DG HOP2 H N N 254 DG "H5'" H N N 255 DG "H5''" H N N 256 DG "H4'" H N N 257 DG "H3'" H N N 258 DG "HO3'" H N N 259 DG "H2'" H N N 260 DG "H2''" H N N 261 DG "H1'" H N N 262 DG H8 H N N 263 DG H1 H N N 264 DG H21 H N N 265 DG H22 H N N 266 DT OP3 O N N 267 DT P P N N 268 DT OP1 O N N 269 DT OP2 O N N 270 DT "O5'" O N N 271 DT "C5'" C N N 272 DT "C4'" C N R 273 DT "O4'" O N N 274 DT "C3'" C N S 275 DT "O3'" O N N 276 DT "C2'" C N N 277 DT "C1'" C N R 278 DT N1 N N N 279 DT C2 C N N 280 DT O2 O N N 281 DT N3 N N N 282 DT C4 C N N 283 DT O4 O N N 284 DT C5 C N N 285 DT C7 C N N 286 DT C6 C N N 287 DT HOP3 H N N 288 DT HOP2 H N N 289 DT "H5'" H N N 290 DT "H5''" H N N 291 DT "H4'" H N N 292 DT "H3'" H N N 293 DT "HO3'" H N N 294 DT "H2'" H N N 295 DT "H2''" H N N 296 DT "H1'" H N N 297 DT H3 H N N 298 DT H71 H N N 299 DT H72 H N N 300 DT H73 H N N 301 DT H6 H N N 302 G OP3 O N N 303 G P P N N 304 G OP1 O N N 305 G OP2 O N N 306 G "O5'" O N N 307 G "C5'" C N N 308 G "C4'" C N R 309 G "O4'" O N N 310 G "C3'" C N S 311 G "O3'" O N N 312 G "C2'" C N R 313 G "O2'" O N N 314 G "C1'" C N R 315 G N9 N Y N 316 G C8 C Y N 317 G N7 N Y N 318 G C5 C Y N 319 G C6 C N N 320 G O6 O N N 321 G N1 N N N 322 G C2 C N N 323 G N2 N N N 324 G N3 N N N 325 G C4 C Y N 326 G HOP3 H N N 327 G HOP2 H N N 328 G "H5'" H N N 329 G "H5''" H N N 330 G "H4'" H N N 331 G "H3'" H N N 332 G "HO3'" H N N 333 G "H2'" H N N 334 G "HO2'" H N N 335 G "H1'" H N N 336 G H8 H N N 337 G H1 H N N 338 G H21 H N N 339 G H22 H N N 340 GLN N N N N 341 GLN CA C N S 342 GLN C C N N 343 GLN O O N N 344 GLN CB C N N 345 GLN CG C N N 346 GLN CD C N N 347 GLN OE1 O N N 348 GLN NE2 N N N 349 GLN OXT O N N 350 GLN H H N N 351 GLN H2 H N N 352 GLN HA H N N 353 GLN HB2 H N N 354 GLN HB3 H N N 355 GLN HG2 H N N 356 GLN HG3 H N N 357 GLN HE21 H N N 358 GLN HE22 H N N 359 GLN HXT H N N 360 GLU N N N N 361 GLU CA C N S 362 GLU C C N N 363 GLU O O N N 364 GLU CB C N N 365 GLU CG C N N 366 GLU CD C N N 367 GLU OE1 O N N 368 GLU OE2 O N N 369 GLU OXT O N N 370 GLU H H N N 371 GLU H2 H N N 372 GLU HA H N N 373 GLU HB2 H N N 374 GLU HB3 H N N 375 GLU HG2 H N N 376 GLU HG3 H N N 377 GLU HE2 H N N 378 GLU HXT H N N 379 GLY N N N N 380 GLY CA C N N 381 GLY C C N N 382 GLY O O N N 383 GLY OXT O N N 384 GLY H H N N 385 GLY H2 H N N 386 GLY HA2 H N N 387 GLY HA3 H N N 388 GLY HXT H N N 389 HIS N N N N 390 HIS CA C N S 391 HIS C C N N 392 HIS O O N N 393 HIS CB C N N 394 HIS CG C Y N 395 HIS ND1 N Y N 396 HIS CD2 C Y N 397 HIS CE1 C Y N 398 HIS NE2 N Y N 399 HIS OXT O N N 400 HIS H H N N 401 HIS H2 H N N 402 HIS HA H N N 403 HIS HB2 H N N 404 HIS HB3 H N N 405 HIS HD1 H N N 406 HIS HD2 H N N 407 HIS HE1 H N N 408 HIS HE2 H N N 409 HIS HXT H N N 410 ILE N N N N 411 ILE CA C N S 412 ILE C C N N 413 ILE O O N N 414 ILE CB C N S 415 ILE CG1 C N N 416 ILE CG2 C N N 417 ILE CD1 C N N 418 ILE OXT O N N 419 ILE H H N N 420 ILE H2 H N N 421 ILE HA H N N 422 ILE HB H N N 423 ILE HG12 H N N 424 ILE HG13 H N N 425 ILE HG21 H N N 426 ILE HG22 H N N 427 ILE HG23 H N N 428 ILE HD11 H N N 429 ILE HD12 H N N 430 ILE HD13 H N N 431 ILE HXT H N N 432 LEU N N N N 433 LEU CA C N S 434 LEU C C N N 435 LEU O O N N 436 LEU CB C N N 437 LEU CG C N N 438 LEU CD1 C N N 439 LEU CD2 C N N 440 LEU OXT O N N 441 LEU H H N N 442 LEU H2 H N N 443 LEU HA H N N 444 LEU HB2 H N N 445 LEU HB3 H N N 446 LEU HG H N N 447 LEU HD11 H N N 448 LEU HD12 H N N 449 LEU HD13 H N N 450 LEU HD21 H N N 451 LEU HD22 H N N 452 LEU HD23 H N N 453 LEU HXT H N N 454 LYS N N N N 455 LYS CA C N S 456 LYS C C N N 457 LYS O O N N 458 LYS CB C N N 459 LYS CG C N N 460 LYS CD C N N 461 LYS CE C N N 462 LYS NZ N N N 463 LYS OXT O N N 464 LYS H H N N 465 LYS H2 H N N 466 LYS HA H N N 467 LYS HB2 H N N 468 LYS HB3 H N N 469 LYS HG2 H N N 470 LYS HG3 H N N 471 LYS HD2 H N N 472 LYS HD3 H N N 473 LYS HE2 H N N 474 LYS HE3 H N N 475 LYS HZ1 H N N 476 LYS HZ2 H N N 477 LYS HZ3 H N N 478 LYS HXT H N N 479 MET N N N N 480 MET CA C N S 481 MET C C N N 482 MET O O N N 483 MET CB C N N 484 MET CG C N N 485 MET SD S N N 486 MET CE C N N 487 MET OXT O N N 488 MET H H N N 489 MET H2 H N N 490 MET HA H N N 491 MET HB2 H N N 492 MET HB3 H N N 493 MET HG2 H N N 494 MET HG3 H N N 495 MET HE1 H N N 496 MET HE2 H N N 497 MET HE3 H N N 498 MET HXT H N N 499 PHE N N N N 500 PHE CA C N S 501 PHE C C N N 502 PHE O O N N 503 PHE CB C N N 504 PHE CG C Y N 505 PHE CD1 C Y N 506 PHE CD2 C Y N 507 PHE CE1 C Y N 508 PHE CE2 C Y N 509 PHE CZ C Y N 510 PHE OXT O N N 511 PHE H H N N 512 PHE H2 H N N 513 PHE HA H N N 514 PHE HB2 H N N 515 PHE HB3 H N N 516 PHE HD1 H N N 517 PHE HD2 H N N 518 PHE HE1 H N N 519 PHE HE2 H N N 520 PHE HZ H N N 521 PHE HXT H N N 522 PRO N N N N 523 PRO CA C N S 524 PRO C C N N 525 PRO O O N N 526 PRO CB C N N 527 PRO CG C N N 528 PRO CD C N N 529 PRO OXT O N N 530 PRO H H N N 531 PRO HA H N N 532 PRO HB2 H N N 533 PRO HB3 H N N 534 PRO HG2 H N N 535 PRO HG3 H N N 536 PRO HD2 H N N 537 PRO HD3 H N N 538 PRO HXT H N N 539 SER N N N N 540 SER CA C N S 541 SER C C N N 542 SER O O N N 543 SER CB C N N 544 SER OG O N N 545 SER OXT O N N 546 SER H H N N 547 SER H2 H N N 548 SER HA H N N 549 SER HB2 H N N 550 SER HB3 H N N 551 SER HG H N N 552 SER HXT H N N 553 THR N N N N 554 THR CA C N S 555 THR C C N N 556 THR O O N N 557 THR CB C N R 558 THR OG1 O N N 559 THR CG2 C N N 560 THR OXT O N N 561 THR H H N N 562 THR H2 H N N 563 THR HA H N N 564 THR HB H N N 565 THR HG1 H N N 566 THR HG21 H N N 567 THR HG22 H N N 568 THR HG23 H N N 569 THR HXT H N N 570 TRP N N N N 571 TRP CA C N S 572 TRP C C N N 573 TRP O O N N 574 TRP CB C N N 575 TRP CG C Y N 576 TRP CD1 C Y N 577 TRP CD2 C Y N 578 TRP NE1 N Y N 579 TRP CE2 C Y N 580 TRP CE3 C Y N 581 TRP CZ2 C Y N 582 TRP CZ3 C Y N 583 TRP CH2 C Y N 584 TRP OXT O N N 585 TRP H H N N 586 TRP H2 H N N 587 TRP HA H N N 588 TRP HB2 H N N 589 TRP HB3 H N N 590 TRP HD1 H N N 591 TRP HE1 H N N 592 TRP HE3 H N N 593 TRP HZ2 H N N 594 TRP HZ3 H N N 595 TRP HH2 H N N 596 TRP HXT H N N 597 TYR N N N N 598 TYR CA C N S 599 TYR C C N N 600 TYR O O N N 601 TYR CB C N N 602 TYR CG C Y N 603 TYR CD1 C Y N 604 TYR CD2 C Y N 605 TYR CE1 C Y N 606 TYR CE2 C Y N 607 TYR CZ C Y N 608 TYR OH O N N 609 TYR OXT O N N 610 TYR H H N N 611 TYR H2 H N N 612 TYR HA H N N 613 TYR HB2 H N N 614 TYR HB3 H N N 615 TYR HD1 H N N 616 TYR HD2 H N N 617 TYR HE1 H N N 618 TYR HE2 H N N 619 TYR HH H N N 620 TYR HXT H N N 621 U OP3 O N N 622 U P P N N 623 U OP1 O N N 624 U OP2 O N N 625 U "O5'" O N N 626 U "C5'" C N N 627 U "C4'" C N R 628 U "O4'" O N N 629 U "C3'" C N S 630 U "O3'" O N N 631 U "C2'" C N R 632 U "O2'" O N N 633 U "C1'" C N R 634 U N1 N N N 635 U C2 C N N 636 U O2 O N N 637 U N3 N N N 638 U C4 C N N 639 U O4 O N N 640 U C5 C N N 641 U C6 C N N 642 U HOP3 H N N 643 U HOP2 H N N 644 U "H5'" H N N 645 U "H5''" H N N 646 U "H4'" H N N 647 U "H3'" H N N 648 U "HO3'" H N N 649 U "H2'" H N N 650 U "HO2'" H N N 651 U "H1'" H N N 652 U H3 H N N 653 U H5 H N N 654 U H6 H N N 655 VAL N N N N 656 VAL CA C N S 657 VAL C C N N 658 VAL O O N N 659 VAL CB C N N 660 VAL CG1 C N N 661 VAL CG2 C N N 662 VAL OXT O N N 663 VAL H H N N 664 VAL H2 H N N 665 VAL HA H N N 666 VAL HB H N N 667 VAL HG11 H N N 668 VAL HG12 H N N 669 VAL HG13 H N N 670 VAL HG21 H N N 671 VAL HG22 H N N 672 VAL HG23 H N N 673 VAL HXT H N N 674 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 CYS N CA sing N N 145 CYS N H sing N N 146 CYS N H2 sing N N 147 CYS CA C sing N N 148 CYS CA CB sing N N 149 CYS CA HA sing N N 150 CYS C O doub N N 151 CYS C OXT sing N N 152 CYS CB SG sing N N 153 CYS CB HB2 sing N N 154 CYS CB HB3 sing N N 155 CYS SG HG sing N N 156 CYS OXT HXT sing N N 157 DA OP3 P sing N N 158 DA OP3 HOP3 sing N N 159 DA P OP1 doub N N 160 DA P OP2 sing N N 161 DA P "O5'" sing N N 162 DA OP2 HOP2 sing N N 163 DA "O5'" "C5'" sing N N 164 DA "C5'" "C4'" sing N N 165 DA "C5'" "H5'" sing N N 166 DA "C5'" "H5''" sing N N 167 DA "C4'" "O4'" sing N N 168 DA "C4'" "C3'" sing N N 169 DA "C4'" "H4'" sing N N 170 DA "O4'" "C1'" sing N N 171 DA "C3'" "O3'" sing N N 172 DA "C3'" "C2'" sing N N 173 DA "C3'" "H3'" sing N N 174 DA "O3'" "HO3'" sing N N 175 DA "C2'" "C1'" sing N N 176 DA "C2'" "H2'" sing N N 177 DA "C2'" "H2''" sing N N 178 DA "C1'" N9 sing N N 179 DA "C1'" "H1'" sing N N 180 DA N9 C8 sing Y N 181 DA N9 C4 sing Y N 182 DA C8 N7 doub Y N 183 DA C8 H8 sing N N 184 DA N7 C5 sing Y N 185 DA C5 C6 sing Y N 186 DA C5 C4 doub Y N 187 DA C6 N6 sing N N 188 DA C6 N1 doub Y N 189 DA N6 H61 sing N N 190 DA N6 H62 sing N N 191 DA N1 C2 sing Y N 192 DA C2 N3 doub Y N 193 DA C2 H2 sing N N 194 DA N3 C4 sing Y N 195 DC OP3 P sing N N 196 DC OP3 HOP3 sing N N 197 DC P OP1 doub N N 198 DC P OP2 sing N N 199 DC P "O5'" sing N N 200 DC OP2 HOP2 sing N N 201 DC "O5'" "C5'" sing N N 202 DC "C5'" "C4'" sing N N 203 DC "C5'" "H5'" sing N N 204 DC "C5'" "H5''" sing N N 205 DC "C4'" "O4'" sing N N 206 DC "C4'" "C3'" sing N N 207 DC "C4'" "H4'" sing N N 208 DC "O4'" "C1'" sing N N 209 DC "C3'" "O3'" sing N N 210 DC "C3'" "C2'" sing N N 211 DC "C3'" "H3'" sing N N 212 DC "O3'" "HO3'" sing N N 213 DC "C2'" "C1'" sing N N 214 DC "C2'" "H2'" sing N N 215 DC "C2'" "H2''" sing N N 216 DC "C1'" N1 sing N N 217 DC "C1'" "H1'" sing N N 218 DC N1 C2 sing N N 219 DC N1 C6 sing N N 220 DC C2 O2 doub N N 221 DC C2 N3 sing N N 222 DC N3 C4 doub N N 223 DC C4 N4 sing N N 224 DC C4 C5 sing N N 225 DC N4 H41 sing N N 226 DC N4 H42 sing N N 227 DC C5 C6 doub N N 228 DC C5 H5 sing N N 229 DC C6 H6 sing N N 230 DG OP3 P sing N N 231 DG OP3 HOP3 sing N N 232 DG P OP1 doub N N 233 DG P OP2 sing N N 234 DG P "O5'" sing N N 235 DG OP2 HOP2 sing N N 236 DG "O5'" "C5'" sing N N 237 DG "C5'" "C4'" sing N N 238 DG "C5'" "H5'" sing N N 239 DG "C5'" "H5''" sing N N 240 DG "C4'" "O4'" sing N N 241 DG "C4'" "C3'" sing N N 242 DG "C4'" "H4'" sing N N 243 DG "O4'" "C1'" sing N N 244 DG "C3'" "O3'" sing N N 245 DG "C3'" "C2'" sing N N 246 DG "C3'" "H3'" sing N N 247 DG "O3'" "HO3'" sing N N 248 DG "C2'" "C1'" sing N N 249 DG "C2'" "H2'" sing N N 250 DG "C2'" "H2''" sing N N 251 DG "C1'" N9 sing N N 252 DG "C1'" "H1'" sing N N 253 DG N9 C8 sing Y N 254 DG N9 C4 sing Y N 255 DG C8 N7 doub Y N 256 DG C8 H8 sing N N 257 DG N7 C5 sing Y N 258 DG C5 C6 sing N N 259 DG C5 C4 doub Y N 260 DG C6 O6 doub N N 261 DG C6 N1 sing N N 262 DG N1 C2 sing N N 263 DG N1 H1 sing N N 264 DG C2 N2 sing N N 265 DG C2 N3 doub N N 266 DG N2 H21 sing N N 267 DG N2 H22 sing N N 268 DG N3 C4 sing N N 269 DT OP3 P sing N N 270 DT OP3 HOP3 sing N N 271 DT P OP1 doub N N 272 DT P OP2 sing N N 273 DT P "O5'" sing N N 274 DT OP2 HOP2 sing N N 275 DT "O5'" "C5'" sing N N 276 DT "C5'" "C4'" sing N N 277 DT "C5'" "H5'" sing N N 278 DT "C5'" "H5''" sing N N 279 DT "C4'" "O4'" sing N N 280 DT "C4'" "C3'" sing N N 281 DT "C4'" "H4'" sing N N 282 DT "O4'" "C1'" sing N N 283 DT "C3'" "O3'" sing N N 284 DT "C3'" "C2'" sing N N 285 DT "C3'" "H3'" sing N N 286 DT "O3'" "HO3'" sing N N 287 DT "C2'" "C1'" sing N N 288 DT "C2'" "H2'" sing N N 289 DT "C2'" "H2''" sing N N 290 DT "C1'" N1 sing N N 291 DT "C1'" "H1'" sing N N 292 DT N1 C2 sing N N 293 DT N1 C6 sing N N 294 DT C2 O2 doub N N 295 DT C2 N3 sing N N 296 DT N3 C4 sing N N 297 DT N3 H3 sing N N 298 DT C4 O4 doub N N 299 DT C4 C5 sing N N 300 DT C5 C7 sing N N 301 DT C5 C6 doub N N 302 DT C7 H71 sing N N 303 DT C7 H72 sing N N 304 DT C7 H73 sing N N 305 DT C6 H6 sing N N 306 G OP3 P sing N N 307 G OP3 HOP3 sing N N 308 G P OP1 doub N N 309 G P OP2 sing N N 310 G P "O5'" sing N N 311 G OP2 HOP2 sing N N 312 G "O5'" "C5'" sing N N 313 G "C5'" "C4'" sing N N 314 G "C5'" "H5'" sing N N 315 G "C5'" "H5''" sing N N 316 G "C4'" "O4'" sing N N 317 G "C4'" "C3'" sing N N 318 G "C4'" "H4'" sing N N 319 G "O4'" "C1'" sing N N 320 G "C3'" "O3'" sing N N 321 G "C3'" "C2'" sing N N 322 G "C3'" "H3'" sing N N 323 G "O3'" "HO3'" sing N N 324 G "C2'" "O2'" sing N N 325 G "C2'" "C1'" sing N N 326 G "C2'" "H2'" sing N N 327 G "O2'" "HO2'" sing N N 328 G "C1'" N9 sing N N 329 G "C1'" "H1'" sing N N 330 G N9 C8 sing Y N 331 G N9 C4 sing Y N 332 G C8 N7 doub Y N 333 G C8 H8 sing N N 334 G N7 C5 sing Y N 335 G C5 C6 sing N N 336 G C5 C4 doub Y N 337 G C6 O6 doub N N 338 G C6 N1 sing N N 339 G N1 C2 sing N N 340 G N1 H1 sing N N 341 G C2 N2 sing N N 342 G C2 N3 doub N N 343 G N2 H21 sing N N 344 G N2 H22 sing N N 345 G N3 C4 sing N N 346 GLN N CA sing N N 347 GLN N H sing N N 348 GLN N H2 sing N N 349 GLN CA C sing N N 350 GLN CA CB sing N N 351 GLN CA HA sing N N 352 GLN C O doub N N 353 GLN C OXT sing N N 354 GLN CB CG sing N N 355 GLN CB HB2 sing N N 356 GLN CB HB3 sing N N 357 GLN CG CD sing N N 358 GLN CG HG2 sing N N 359 GLN CG HG3 sing N N 360 GLN CD OE1 doub N N 361 GLN CD NE2 sing N N 362 GLN NE2 HE21 sing N N 363 GLN NE2 HE22 sing N N 364 GLN OXT HXT sing N N 365 GLU N CA sing N N 366 GLU N H sing N N 367 GLU N H2 sing N N 368 GLU CA C sing N N 369 GLU CA CB sing N N 370 GLU CA HA sing N N 371 GLU C O doub N N 372 GLU C OXT sing N N 373 GLU CB CG sing N N 374 GLU CB HB2 sing N N 375 GLU CB HB3 sing N N 376 GLU CG CD sing N N 377 GLU CG HG2 sing N N 378 GLU CG HG3 sing N N 379 GLU CD OE1 doub N N 380 GLU CD OE2 sing N N 381 GLU OE2 HE2 sing N N 382 GLU OXT HXT sing N N 383 GLY N CA sing N N 384 GLY N H sing N N 385 GLY N H2 sing N N 386 GLY CA C sing N N 387 GLY CA HA2 sing N N 388 GLY CA HA3 sing N N 389 GLY C O doub N N 390 GLY C OXT sing N N 391 GLY OXT HXT sing N N 392 HIS N CA sing N N 393 HIS N H sing N N 394 HIS N H2 sing N N 395 HIS CA C sing N N 396 HIS CA CB sing N N 397 HIS CA HA sing N N 398 HIS C O doub N N 399 HIS C OXT sing N N 400 HIS CB CG sing N N 401 HIS CB HB2 sing N N 402 HIS CB HB3 sing N N 403 HIS CG ND1 sing Y N 404 HIS CG CD2 doub Y N 405 HIS ND1 CE1 doub Y N 406 HIS ND1 HD1 sing N N 407 HIS CD2 NE2 sing Y N 408 HIS CD2 HD2 sing N N 409 HIS CE1 NE2 sing Y N 410 HIS CE1 HE1 sing N N 411 HIS NE2 HE2 sing N N 412 HIS OXT HXT sing N N 413 ILE N CA sing N N 414 ILE N H sing N N 415 ILE N H2 sing N N 416 ILE CA C sing N N 417 ILE CA CB sing N N 418 ILE CA HA sing N N 419 ILE C O doub N N 420 ILE C OXT sing N N 421 ILE CB CG1 sing N N 422 ILE CB CG2 sing N N 423 ILE CB HB sing N N 424 ILE CG1 CD1 sing N N 425 ILE CG1 HG12 sing N N 426 ILE CG1 HG13 sing N N 427 ILE CG2 HG21 sing N N 428 ILE CG2 HG22 sing N N 429 ILE CG2 HG23 sing N N 430 ILE CD1 HD11 sing N N 431 ILE CD1 HD12 sing N N 432 ILE CD1 HD13 sing N N 433 ILE OXT HXT sing N N 434 LEU N CA sing N N 435 LEU N H sing N N 436 LEU N H2 sing N N 437 LEU CA C sing N N 438 LEU CA CB sing N N 439 LEU CA HA sing N N 440 LEU C O doub N N 441 LEU C OXT sing N N 442 LEU CB CG sing N N 443 LEU CB HB2 sing N N 444 LEU CB HB3 sing N N 445 LEU CG CD1 sing N N 446 LEU CG CD2 sing N N 447 LEU CG HG sing N N 448 LEU CD1 HD11 sing N N 449 LEU CD1 HD12 sing N N 450 LEU CD1 HD13 sing N N 451 LEU CD2 HD21 sing N N 452 LEU CD2 HD22 sing N N 453 LEU CD2 HD23 sing N N 454 LEU OXT HXT sing N N 455 LYS N CA sing N N 456 LYS N H sing N N 457 LYS N H2 sing N N 458 LYS CA C sing N N 459 LYS CA CB sing N N 460 LYS CA HA sing N N 461 LYS C O doub N N 462 LYS C OXT sing N N 463 LYS CB CG sing N N 464 LYS CB HB2 sing N N 465 LYS CB HB3 sing N N 466 LYS CG CD sing N N 467 LYS CG HG2 sing N N 468 LYS CG HG3 sing N N 469 LYS CD CE sing N N 470 LYS CD HD2 sing N N 471 LYS CD HD3 sing N N 472 LYS CE NZ sing N N 473 LYS CE HE2 sing N N 474 LYS CE HE3 sing N N 475 LYS NZ HZ1 sing N N 476 LYS NZ HZ2 sing N N 477 LYS NZ HZ3 sing N N 478 LYS OXT HXT sing N N 479 MET N CA sing N N 480 MET N H sing N N 481 MET N H2 sing N N 482 MET CA C sing N N 483 MET CA CB sing N N 484 MET CA HA sing N N 485 MET C O doub N N 486 MET C OXT sing N N 487 MET CB CG sing N N 488 MET CB HB2 sing N N 489 MET CB HB3 sing N N 490 MET CG SD sing N N 491 MET CG HG2 sing N N 492 MET CG HG3 sing N N 493 MET SD CE sing N N 494 MET CE HE1 sing N N 495 MET CE HE2 sing N N 496 MET CE HE3 sing N N 497 MET OXT HXT sing N N 498 PHE N CA sing N N 499 PHE N H sing N N 500 PHE N H2 sing N N 501 PHE CA C sing N N 502 PHE CA CB sing N N 503 PHE CA HA sing N N 504 PHE C O doub N N 505 PHE C OXT sing N N 506 PHE CB CG sing N N 507 PHE CB HB2 sing N N 508 PHE CB HB3 sing N N 509 PHE CG CD1 doub Y N 510 PHE CG CD2 sing Y N 511 PHE CD1 CE1 sing Y N 512 PHE CD1 HD1 sing N N 513 PHE CD2 CE2 doub Y N 514 PHE CD2 HD2 sing N N 515 PHE CE1 CZ doub Y N 516 PHE CE1 HE1 sing N N 517 PHE CE2 CZ sing Y N 518 PHE CE2 HE2 sing N N 519 PHE CZ HZ sing N N 520 PHE OXT HXT sing N N 521 PRO N CA sing N N 522 PRO N CD sing N N 523 PRO N H sing N N 524 PRO CA C sing N N 525 PRO CA CB sing N N 526 PRO CA HA sing N N 527 PRO C O doub N N 528 PRO C OXT sing N N 529 PRO CB CG sing N N 530 PRO CB HB2 sing N N 531 PRO CB HB3 sing N N 532 PRO CG CD sing N N 533 PRO CG HG2 sing N N 534 PRO CG HG3 sing N N 535 PRO CD HD2 sing N N 536 PRO CD HD3 sing N N 537 PRO OXT HXT sing N N 538 SER N CA sing N N 539 SER N H sing N N 540 SER N H2 sing N N 541 SER CA C sing N N 542 SER CA CB sing N N 543 SER CA HA sing N N 544 SER C O doub N N 545 SER C OXT sing N N 546 SER CB OG sing N N 547 SER CB HB2 sing N N 548 SER CB HB3 sing N N 549 SER OG HG sing N N 550 SER OXT HXT sing N N 551 THR N CA sing N N 552 THR N H sing N N 553 THR N H2 sing N N 554 THR CA C sing N N 555 THR CA CB sing N N 556 THR CA HA sing N N 557 THR C O doub N N 558 THR C OXT sing N N 559 THR CB OG1 sing N N 560 THR CB CG2 sing N N 561 THR CB HB sing N N 562 THR OG1 HG1 sing N N 563 THR CG2 HG21 sing N N 564 THR CG2 HG22 sing N N 565 THR CG2 HG23 sing N N 566 THR OXT HXT sing N N 567 TRP N CA sing N N 568 TRP N H sing N N 569 TRP N H2 sing N N 570 TRP CA C sing N N 571 TRP CA CB sing N N 572 TRP CA HA sing N N 573 TRP C O doub N N 574 TRP C OXT sing N N 575 TRP CB CG sing N N 576 TRP CB HB2 sing N N 577 TRP CB HB3 sing N N 578 TRP CG CD1 doub Y N 579 TRP CG CD2 sing Y N 580 TRP CD1 NE1 sing Y N 581 TRP CD1 HD1 sing N N 582 TRP CD2 CE2 doub Y N 583 TRP CD2 CE3 sing Y N 584 TRP NE1 CE2 sing Y N 585 TRP NE1 HE1 sing N N 586 TRP CE2 CZ2 sing Y N 587 TRP CE3 CZ3 doub Y N 588 TRP CE3 HE3 sing N N 589 TRP CZ2 CH2 doub Y N 590 TRP CZ2 HZ2 sing N N 591 TRP CZ3 CH2 sing Y N 592 TRP CZ3 HZ3 sing N N 593 TRP CH2 HH2 sing N N 594 TRP OXT HXT sing N N 595 TYR N CA sing N N 596 TYR N H sing N N 597 TYR N H2 sing N N 598 TYR CA C sing N N 599 TYR CA CB sing N N 600 TYR CA HA sing N N 601 TYR C O doub N N 602 TYR C OXT sing N N 603 TYR CB CG sing N N 604 TYR CB HB2 sing N N 605 TYR CB HB3 sing N N 606 TYR CG CD1 doub Y N 607 TYR CG CD2 sing Y N 608 TYR CD1 CE1 sing Y N 609 TYR CD1 HD1 sing N N 610 TYR CD2 CE2 doub Y N 611 TYR CD2 HD2 sing N N 612 TYR CE1 CZ doub Y N 613 TYR CE1 HE1 sing N N 614 TYR CE2 CZ sing Y N 615 TYR CE2 HE2 sing N N 616 TYR CZ OH sing N N 617 TYR OH HH sing N N 618 TYR OXT HXT sing N N 619 U OP3 P sing N N 620 U OP3 HOP3 sing N N 621 U P OP1 doub N N 622 U P OP2 sing N N 623 U P "O5'" sing N N 624 U OP2 HOP2 sing N N 625 U "O5'" "C5'" sing N N 626 U "C5'" "C4'" sing N N 627 U "C5'" "H5'" sing N N 628 U "C5'" "H5''" sing N N 629 U "C4'" "O4'" sing N N 630 U "C4'" "C3'" sing N N 631 U "C4'" "H4'" sing N N 632 U "O4'" "C1'" sing N N 633 U "C3'" "O3'" sing N N 634 U "C3'" "C2'" sing N N 635 U "C3'" "H3'" sing N N 636 U "O3'" "HO3'" sing N N 637 U "C2'" "O2'" sing N N 638 U "C2'" "C1'" sing N N 639 U "C2'" "H2'" sing N N 640 U "O2'" "HO2'" sing N N 641 U "C1'" N1 sing N N 642 U "C1'" "H1'" sing N N 643 U N1 C2 sing N N 644 U N1 C6 sing N N 645 U C2 O2 doub N N 646 U C2 N3 sing N N 647 U N3 C4 sing N N 648 U N3 H3 sing N N 649 U C4 O4 doub N N 650 U C4 C5 sing N N 651 U C5 C6 doub N N 652 U C5 H5 sing N N 653 U C6 H6 sing N N 654 VAL N CA sing N N 655 VAL N H sing N N 656 VAL N H2 sing N N 657 VAL CA C sing N N 658 VAL CA CB sing N N 659 VAL CA HA sing N N 660 VAL C O doub N N 661 VAL C OXT sing N N 662 VAL CB CG1 sing N N 663 VAL CB CG2 sing N N 664 VAL CB HB sing N N 665 VAL CG1 HG11 sing N N 666 VAL CG1 HG12 sing N N 667 VAL CG1 HG13 sing N N 668 VAL CG2 HG21 sing N N 669 VAL CG2 HG22 sing N N 670 VAL CG2 HG23 sing N N 671 VAL OXT HXT sing N N 672 # _em_admin.current_status REL _em_admin.deposition_date 2025-10-29 _em_admin.deposition_site RCSB _em_admin.entry_id 9YYG _em_admin.last_update 2026-07-15 _em_admin.map_release_date 2026-07-15 _em_admin.title 'AI-generated RNA-guided nuclease TAM-bound state' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units MEGADALTONS _em_entity_assembly_molwt.value 0.149 # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 50 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version _em_software.reference_DOI 'PARTICLE SELECTION' ? 1 1 ? ? cryoSPARC 4.3.0 ? 'IMAGE ACQUISITION' ? 2 ? ? 1 SerialEM 3.8.7 ? MASKING ? 3 ? ? ? ? ? ? 'CTF CORRECTION' PatchCTF 4 1 ? ? cryoSPARC 4.3.0 ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? ? 'MODEL FITTING' ? 7 ? 1 ? ? ? ? OTHER ? 8 ? ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 9 1 ? ? cryoSPARC 4.3.0 ? 'FINAL EULER ASSIGNMENT' ? 10 1 ? ? cryoSPARC 4.3.0 ? CLASSIFICATION ? 11 1 ? ? cryoSPARC 4.3.0 ? RECONSTRUCTION ? 12 1 ? ? cryoSPARC 4.3.0 ? 'MODEL REFINEMENT' ? 13 ? 1 ? PHENIX 1.21.1-5419 ? 'VOLUME SELECTION' ? 14 1 1 1 ? ? ? 'SERIES ALIGNMENT' ? 15 1 1 1 ? ? ? 'MOLECULAR REPLACEMENT' ? 16 1 1 1 ? ? ? 'LATTICE DISTORTION CORRECTION' ? 17 1 1 1 ? ? ? 'SYMMETRY DETERMINATION' ? 18 1 1 1 ? ? ? 'CRYSTALLOGRAPHY MERGING' ? 19 1 1 1 ? ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 9YYG 'double helix' 9YYG 'a-form double helix' 9YYG 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B G 1 1_555 B C 25 1_555 -0.303 -0.120 -0.316 -12.644 -7.489 1.438 1 B_G-115:C-91_B B -115 ? B -91 ? 19 1 1 B G 2 1_555 B C 24 1_555 -0.151 -0.022 -0.065 -6.983 -9.261 -3.519 2 B_G-114:C-92_B B -114 ? B -92 ? 19 1 1 B U 3 1_555 B A 23 1_555 0.053 -0.058 -0.099 -1.931 -11.271 -0.069 3 B_U-113:A-93_B B -113 ? B -93 ? 20 1 1 B G 4 1_555 B C 22 1_555 -0.235 -0.101 -0.085 -1.802 -6.937 -2.867 4 B_G-112:C-94_B B -112 ? B -94 ? 19 1 1 B G 5 1_555 B C 31 1_555 1.575 -4.033 0.371 7.325 6.367 -85.126 5 B_G-111:C-85_B B -111 ? B -85 ? ? ? 1 B C 6 1_555 B G 20 1_555 0.180 -0.062 -0.235 16.661 -13.226 -2.755 6 B_C-110:G-96_B B -110 ? B -96 ? 19 1 1 B U 7 1_555 B A 19 1_555 0.065 -0.040 -0.248 5.229 -14.971 0.797 7 B_U-109:A-97_B B -109 ? B -97 ? 20 1 1 B G 8 1_555 B C 18 1_555 -0.118 -0.058 -0.082 -6.145 -4.263 -1.393 8 B_G-108:C-98_B B -108 ? B -98 ? 19 1 1 B C 9 1_555 B U 17 1_555 0.907 0.126 -0.073 -3.180 -1.592 -34.949 9 B_C-107:U-99_B B -107 ? B -99 ? ? ? 1 B G 10 1_555 B C 16 1_555 -0.121 -0.105 0.245 10.212 0.425 -2.949 10 B_G-106:C-100_B B -106 ? B -100 ? 19 1 1 B G 111 1_555 B U 15 1_555 -2.227 -0.384 0.180 -2.697 -13.450 -1.631 11 B_G-5:U-101_B B -5 ? B -101 ? 28 1 1 B U 112 1_555 B A 14 1_555 -0.057 0.002 -0.139 -1.569 -13.784 -5.636 12 B_U-4:A-102_B B -4 ? B -102 ? 20 1 1 B U 113 1_555 B A 13 1_555 -0.023 -0.071 -0.169 -5.147 -13.276 -3.660 13 B_U-3:A-103_B B -3 ? B -103 ? 20 1 1 B C 114 1_555 B G 12 1_555 0.099 -0.087 0.093 2.359 -15.144 -4.236 14 B_C-2:G-104_B B -2 ? B -104 ? 19 1 1 B A 115 1_555 B G 11 1_555 -1.054 -3.317 0.724 8.799 23.265 130.008 15 B_A-1:G-105_B B -1 ? B -105 ? ? ? 1 B G 32 1_555 B A 86 1_555 -0.061 1.530 -0.110 13.911 -8.061 -17.851 16 B_G-84:A-30_B B -84 ? B -30 ? 8 1 1 B C 33 1_555 B G 85 1_555 0.191 -0.106 0.086 9.852 -15.509 -3.983 17 B_C-83:G-31_B B -83 ? B -31 ? 19 1 1 B U 34 1_555 B A 84 1_555 -0.078 -0.052 0.005 3.517 -10.405 -1.856 18 B_U-82:A-32_B B -82 ? B -32 ? 20 1 1 B C 35 1_555 B G 83 1_555 0.232 -0.147 -0.106 8.012 -6.659 -2.117 19 B_C-81:G-33_B B -81 ? B -33 ? 19 1 1 B A 36 1_555 B U 82 1_555 0.041 0.010 -0.137 3.015 -8.404 -0.273 20 B_A-80:U-34_B B -80 ? B -34 ? 20 1 1 B U 37 1_555 B G 81 1_555 2.277 -0.445 -0.064 -1.402 -11.931 2.393 21 B_U-79:G-35_B B -79 ? B -35 ? 28 1 1 B G 38 1_555 B A 80 1_555 6.619 -4.347 -0.343 -12.490 -9.517 -3.093 22 B_G-78:A-36_B B -78 ? B -36 ? 11 10 1 B G 39 1_555 B A 79 1_555 6.438 -4.587 0.356 18.478 8.139 -4.315 23 B_G-77:A-37_B B -77 ? B -37 ? 11 10 1 B A 40 1_555 B G 78 1_555 -6.541 -4.813 0.459 -28.515 8.068 -5.300 24 B_A-76:G-38_B B -76 ? B -38 ? 11 10 1 B G 41 1_555 B C 74 1_555 -0.204 -0.117 -0.037 -1.654 1.880 -1.855 25 B_G-75:C-42_B B -75 ? B -42 ? 19 1 1 B G 42 1_555 B U 73 1_555 -2.191 -0.475 0.027 -5.903 -11.270 -4.306 26 B_G-74:U-43_B B -74 ? B -43 ? 28 1 1 B C 43 1_555 B G 72 1_555 0.137 -0.109 0.168 -1.618 -5.189 -1.242 27 B_C-73:G-44_B B -73 ? B -44 ? 19 1 1 B U 44 1_555 B G 71 1_555 2.043 -0.486 -0.070 0.026 -7.948 -8.019 28 B_U-72:G-45_B B -72 ? B -45 ? 28 1 1 B A 45 1_555 B U 70 1_555 -0.047 -0.110 0.042 -0.069 -4.522 -2.113 29 B_A-71:U-46_B B -71 ? B -46 ? 20 1 1 B U 46 1_555 B A 69 1_555 0.154 -0.153 -0.312 5.651 -6.631 -0.560 30 B_U-70:A-47_B B -70 ? B -47 ? 20 1 1 B G 51 1_555 B C 67 1_555 -0.333 -0.090 0.079 7.006 1.233 3.945 31 B_G-65:C-49_B B -65 ? B -49 ? 19 1 1 B C 53 1_555 B G 66 1_555 0.284 -0.110 0.139 4.453 -9.140 -1.874 32 B_C-63:G-50_B B -63 ? B -50 ? 19 1 1 B C 54 1_555 B G 65 1_555 0.156 -0.125 -0.066 9.284 -11.269 -2.920 33 B_C-62:G-51_B B -62 ? B -51 ? 19 1 1 B U 55 1_555 B G 64 1_555 2.164 -0.472 0.049 3.215 -8.658 -7.722 34 B_U-61:G-52_B B -61 ? B -52 ? 28 1 1 B G 56 1_555 B C 63 1_555 -0.221 -0.146 -0.027 1.535 -4.041 -4.706 35 B_G-60:C-53_B B -60 ? B -53 ? 19 1 1 B C 57 1_555 B G 62 1_555 0.268 -0.146 -0.291 9.399 -3.370 1.652 36 B_C-59:G-54_B B -59 ? B -54 ? 19 1 1 B U 88 1_555 B A 109 1_555 -0.003 -0.085 -0.085 0.046 -4.072 -1.102 37 B_U-28:A-7_B B -28 ? B -7 ? 20 1 1 B C 89 1_555 B G 108 1_555 0.182 -0.061 0.115 -1.558 -5.325 0.182 38 B_C-27:G-8_B B -27 ? B -8 ? 19 1 1 B A 90 1_555 B U 107 1_555 -0.082 -0.015 -0.088 -5.380 -12.179 -5.939 39 B_A-26:U-9_B B -26 ? B -9 ? 20 1 1 B C 91 1_555 B G 106 1_555 0.125 -0.103 0.003 8.697 -10.607 -2.176 40 B_C-25:G-10_B B -25 ? B -10 ? 19 1 1 B G 92 1_555 B U 105 1_555 -2.341 -0.448 0.244 8.191 -13.855 3.228 41 B_G-24:U-11_B B -24 ? B -11 ? 28 1 1 B C 93 1_555 B G 104 1_555 0.143 -0.117 0.007 3.267 -11.364 -1.803 42 B_C-23:G-12_B B -23 ? B -12 ? 19 1 1 B G 94 1_555 B C 103 1_555 -0.152 -0.158 0.071 -0.404 -7.282 -5.478 43 B_G-22:C-13_B B -22 ? B -13 ? 19 1 1 B A 95 1_555 B U 102 1_555 0.044 -0.118 -0.165 -0.294 -2.598 2.316 44 B_A-21:U-14_B B -21 ? B -14 ? 20 1 1 B G 117 1_555 D DC 2 1_555 0.282 0.114 -0.484 -10.337 19.549 2.393 45 B_G1:DC-1_D B 1 ? D -1 ? 19 1 1 C DT 1 1_555 D DA 9 1_555 0.130 -0.131 -0.465 -2.750 -9.976 1.958 46 C_DT-6:DA6_D C -6 ? D 6 ? 20 1 1 C DA 2 1_555 D DT 8 1_555 -0.023 -0.199 -0.963 -8.796 -8.437 1.248 47 C_DA-5:DT5_D C -5 ? D 5 ? 20 1 1 C DT 3 1_555 D DA 7 1_555 -0.064 -0.145 -0.653 -4.167 -7.697 -0.156 48 C_DT-4:DA4_D C -4 ? D 4 ? 20 1 1 C DT 4 1_555 D DA 6 1_555 -0.087 -0.129 -0.241 -3.274 -7.741 1.450 49 C_DT-3:DA3_D C -3 ? D 3 ? 20 1 1 C DG 5 1_555 D DC 5 1_555 -0.197 -0.244 0.983 8.161 1.165 1.232 50 C_DG-2:DC2_D C -2 ? D 2 ? 19 1 1 C DA 6 1_555 D DT 4 1_555 0.679 0.829 0.883 20.721 -1.463 8.991 51 C_DA-1:DT1_D C -1 ? D 1 ? ? ? 1 C DT 7 1_555 D DA 3 1_555 -0.044 0.530 0.943 18.163 -12.031 11.729 52 C_DT0:DA0_D C 0 ? D 0 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B G 1 1_555 B C 25 1_555 B G 2 1_555 B C 24 1_555 -0.560 -1.415 3.251 -7.845 13.442 35.700 -3.668 -0.057 2.632 20.753 12.112 38.843 1 BB_G-115G-114:C-92C-91_BB B -115 ? B -91 ? B -114 ? B -92 ? 1 B G 2 1_555 B C 24 1_555 B U 3 1_555 B A 23 1_555 -0.117 -1.356 3.384 -1.321 -0.413 29.404 -2.576 -0.062 3.404 -0.813 2.600 29.436 2 BB_G-114U-113:A-93C-92_BB B -114 ? B -92 ? B -113 ? B -93 ? 1 B U 3 1_555 B A 23 1_555 B G 4 1_555 B C 22 1_555 -0.272 -1.584 3.490 -0.260 6.040 34.952 -3.512 0.408 3.183 9.965 0.429 35.455 3 BB_U-113G-112:C-94A-93_BB B -113 ? B -93 ? B -112 ? B -94 ? 1 B G 4 1_555 B C 22 1_555 B G 5 1_555 B C 31 1_555 -2.546 1.117 2.677 17.404 -4.887 55.713 1.326 3.252 1.781 -5.082 -18.101 58.348 4 BB_G-112G-111:C-85C-94_BB B -112 ? B -94 ? B -111 ? B -85 ? 1 B G 5 1_555 B C 31 1_555 B C 6 1_555 B G 20 1_555 -1.786 -3.060 4.372 -24.626 17.913 -11.533 0.938 -9.414 1.901 -41.023 -56.397 -32.514 5 BB_G-111C-110:G-96C-85_BB B -111 ? B -85 ? B -110 ? B -96 ? 1 B C 6 1_555 B G 20 1_555 B U 7 1_555 B A 19 1_555 0.504 -1.973 3.588 -0.672 10.645 36.038 -4.477 -0.872 2.900 16.760 1.058 37.533 6 BB_C-110U-109:A-97G-96_BB B -110 ? B -96 ? B -109 ? B -97 ? 1 B U 7 1_555 B A 19 1_555 B G 8 1_555 B C 18 1_555 -0.539 -1.950 3.539 0.675 15.099 31.242 -5.490 1.005 2.363 26.202 -1.172 34.624 7 BB_U-109G-108:C-98A-97_BB B -109 ? B -97 ? B -108 ? B -98 ? 1 B G 8 1_555 B C 18 1_555 B C 9 1_555 B U 17 1_555 -1.838 -1.725 3.379 2.487 14.706 36.840 -4.128 2.977 2.420 22.186 -3.751 39.648 8 BB_G-108C-107:U-99C-98_BB B -108 ? B -98 ? B -107 ? B -99 ? 1 B C 9 1_555 B U 17 1_555 B G 10 1_555 B C 16 1_555 1.697 -1.664 3.189 -2.568 19.970 22.593 -6.316 -3.661 1.170 41.843 5.381 30.176 9 BB_C-107G-106:C-100U-99_BB B -107 ? B -99 ? B -106 ? B -100 ? 1 B G 10 1_555 B C 16 1_555 B G 111 1_555 B U 15 1_555 -3.221 -1.863 3.060 -13.470 -5.776 43.941 -1.825 2.823 4.031 -7.476 17.435 46.206 10 BB_G-106G-5:U-101C-100_BB B -106 ? B -100 ? B -5 ? B -101 ? 1 B G 111 1_555 B U 15 1_555 B U 112 1_555 B A 14 1_555 -1.230 -1.554 3.262 -2.815 6.282 40.059 -2.919 1.466 3.070 9.090 4.072 40.622 11 BB_G-5U-4:A-102U-101_BB B -5 ? B -101 ? B -4 ? B -102 ? 1 B U 112 1_555 B A 14 1_555 B U 113 1_555 B A 13 1_555 -0.201 -1.339 3.342 -1.570 14.629 32.734 -4.162 0.114 2.540 24.475 2.627 35.806 12 BB_U-4U-3:A-103A-102_BB B -4 ? B -102 ? B -3 ? B -103 ? 1 B U 113 1_555 B A 13 1_555 B C 114 1_555 B G 12 1_555 0.480 -1.224 3.122 0.316 4.301 35.710 -2.554 -0.735 2.963 6.983 -0.513 35.962 13 BB_U-3C-2:G-104A-103_BB B -3 ? B -103 ? B -2 ? B -104 ? 1 B C 114 1_555 B G 12 1_555 B A 115 1_555 B G 11 1_555 -0.740 -3.763 -1.154 -163.552 26.122 120.935 -1.842 0.642 -0.939 13.207 82.690 172.928 14 BB_C-2A-1:G-105G-104_BB B -2 ? B -104 ? B -1 ? B -105 ? 1 B G 32 1_555 B A 86 1_555 B C 33 1_555 B G 85 1_555 1.002 -2.114 3.409 -4.713 8.154 32.605 -4.864 -2.435 2.652 14.159 8.184 33.902 15 BB_G-84C-83:G-31A-30_BB B -84 ? B -30 ? B -83 ? B -31 ? 1 B C 33 1_555 B G 85 1_555 B U 34 1_555 B A 84 1_555 -0.563 -2.278 3.569 -5.795 3.362 27.525 -5.489 -0.282 3.319 6.937 11.957 28.313 16 BB_C-83U-82:A-32G-31_BB B -83 ? B -31 ? B -82 ? B -32 ? 1 B U 34 1_555 B A 84 1_555 B C 35 1_555 B G 83 1_555 -0.514 -1.770 3.180 -3.310 10.150 32.892 -4.400 0.404 2.575 17.364 5.663 34.536 17 BB_U-82C-81:G-33A-32_BB B -82 ? B -32 ? B -81 ? B -33 ? 1 B C 35 1_555 B G 83 1_555 B A 36 1_555 B U 82 1_555 0.145 -2.103 3.502 -2.747 10.531 29.094 -5.879 -0.779 2.578 20.097 5.243 31.022 18 BB_C-81A-80:U-34G-33_BB B -81 ? B -33 ? B -80 ? B -34 ? 1 B A 36 1_555 B U 82 1_555 B U 37 1_555 B G 81 1_555 0.298 -1.623 3.634 -0.641 0.385 40.627 -2.384 -0.508 3.614 0.554 0.924 40.634 19 BB_A-80U-79:G-35U-34_BB B -80 ? B -34 ? B -79 ? B -35 ? 1 B U 37 1_555 B G 81 1_555 B G 38 1_555 B A 80 1_555 -0.559 -0.997 3.941 8.607 2.723 58.288 -1.180 1.094 3.786 2.777 -8.779 58.923 20 BB_U-79G-78:A-36G-35_BB B -79 ? B -35 ? B -78 ? B -36 ? 1 B G 38 1_555 B A 80 1_555 B G 39 1_555 B A 79 1_555 0.708 -0.691 3.057 11.424 6.503 27.586 -2.551 0.830 2.886 12.759 -22.416 30.503 21 BB_G-78G-77:A-37A-36_BB B -78 ? B -36 ? B -77 ? B -37 ? 1 B G 39 1_555 B A 79 1_555 B A 40 1_555 B G 78 1_555 0.568 -1.292 4.703 5.828 -6.819 -7.445 18.076 12.808 1.970 38.305 32.738 -11.653 22 BB_G-77A-76:G-38A-37_BB B -77 ? B -37 ? B -76 ? B -38 ? 1 B G 41 1_555 B C 74 1_555 B G 42 1_555 B U 73 1_555 0.147 -2.406 3.245 -0.267 5.323 26.866 -6.297 -0.371 2.724 11.315 0.567 27.380 23 BB_G-75G-74:U-43C-42_BB B -75 ? B -42 ? B -74 ? B -43 ? 1 B G 42 1_555 B U 73 1_555 B C 43 1_555 B G 72 1_555 -0.079 -1.612 3.174 -1.036 -0.408 42.647 -2.176 0.007 3.189 -0.560 1.424 42.661 24 BB_G-74C-73:G-44U-43_BB B -74 ? B -43 ? B -73 ? B -44 ? 1 B C 43 1_555 B G 72 1_555 B U 44 1_555 B G 71 1_555 0.012 -1.848 3.233 3.536 3.436 37.042 -3.322 0.430 3.044 5.379 -5.535 37.357 25 BB_C-73U-72:G-45G-44_BB B -73 ? B -44 ? B -72 ? B -45 ? 1 B U 44 1_555 B G 71 1_555 B A 45 1_555 B U 70 1_555 -0.196 -2.320 3.077 -2.121 14.631 25.379 -6.987 0.039 1.547 30.250 4.386 29.310 26 BB_U-72A-71:U-46G-45_BB B -72 ? B -45 ? B -71 ? B -46 ? 1 B A 45 1_555 B U 70 1_555 B U 46 1_555 B A 69 1_555 0.211 -1.591 3.179 0.771 5.043 32.007 -3.683 -0.251 2.905 9.073 -1.388 32.401 27 BB_A-71U-70:A-47U-46_BB B -71 ? B -46 ? B -70 ? B -47 ? 1 B G 51 1_555 B C 67 1_555 B C 53 1_555 B G 66 1_555 1.937 -2.724 3.594 -0.166 8.320 14.664 -14.104 -6.707 1.774 29.679 0.592 16.850 28 BB_G-65C-63:G-50C-49_BB B -65 ? B -49 ? B -63 ? B -50 ? 1 B C 53 1_555 B G 66 1_555 B C 54 1_555 B G 65 1_555 -1.039 -1.924 3.122 -5.141 8.727 29.613 -5.058 1.052 2.603 16.479 9.708 31.260 29 BB_C-63C-62:G-51G-50_BB B -63 ? B -50 ? B -62 ? B -51 ? 1 B C 54 1_555 B G 65 1_555 B U 55 1_555 B G 64 1_555 -0.494 -2.017 3.612 -3.834 3.608 38.673 -3.492 0.238 3.448 5.417 5.756 39.016 30 BB_C-62U-61:G-52G-51_BB B -62 ? B -51 ? B -61 ? B -52 ? 1 B U 55 1_555 B G 64 1_555 B G 56 1_555 B C 63 1_555 -1.388 -3.074 3.252 -5.183 7.109 16.600 -12.699 1.869 2.103 22.668 16.526 18.773 31 BB_U-61G-60:C-53G-52_BB B -61 ? B -52 ? B -60 ? B -53 ? 1 B G 56 1_555 B C 63 1_555 B C 57 1_555 B G 62 1_555 0.063 -1.913 3.286 -0.846 -3.488 33.728 -2.701 -0.248 3.458 -5.991 1.452 33.913 32 BB_G-60C-59:G-54C-53_BB B -60 ? B -53 ? B -59 ? B -54 ? 1 B U 88 1_555 B A 109 1_555 B C 89 1_555 B G 108 1_555 0.096 -2.004 3.443 0.917 0.149 33.313 -3.521 -0.006 3.436 0.260 -1.600 33.325 33 BB_U-28C-27:G-8A-7_BB B -28 ? B -7 ? B -27 ? B -8 ? 1 B C 89 1_555 B G 108 1_555 B A 90 1_555 B U 107 1_555 -0.376 -2.059 3.316 5.863 6.934 29.239 -5.184 1.796 2.646 13.337 -11.276 30.587 34 BB_C-27A-26:U-9G-8_BB B -27 ? B -8 ? B -26 ? B -9 ? 1 B A 90 1_555 B U 107 1_555 B C 91 1_555 B G 106 1_555 0.565 -1.500 3.081 3.398 -1.637 29.250 -2.610 -0.412 3.201 -3.225 -6.693 29.487 35 BB_A-26C-25:G-10U-9_BB B -26 ? B -9 ? B -25 ? B -10 ? 1 B C 91 1_555 B G 106 1_555 B G 92 1_555 B U 105 1_555 0.804 -2.198 2.962 -2.166 16.229 21.869 -7.422 -2.073 1.029 36.851 4.918 27.259 36 BB_C-25G-24:U-11G-10_BB B -25 ? B -10 ? B -24 ? B -11 ? 1 B G 92 1_555 B U 105 1_555 B C 93 1_555 B G 104 1_555 -0.626 -1.558 3.294 -1.550 4.401 48.314 -2.232 0.643 3.166 5.362 1.888 48.525 37 BB_G-24C-23:G-12U-11_BB B -24 ? B -11 ? B -23 ? B -12 ? 1 B C 93 1_555 B G 104 1_555 B G 94 1_555 B C 103 1_555 0.016 -2.172 3.210 -0.789 11.689 22.394 -7.780 -0.226 1.860 27.786 1.875 25.238 38 BB_C-23G-22:C-13G-12_BB B -23 ? B -12 ? B -22 ? B -13 ? 1 B G 94 1_555 B C 103 1_555 B A 95 1_555 B U 102 1_555 0.405 -1.587 3.261 1.519 9.809 35.685 -3.739 -0.447 2.759 15.638 -2.422 36.996 39 BB_G-22A-21:U-14C-13_BB B -22 ? B -13 ? B -21 ? B -14 ? 1 C DT 1 1_555 D DA 9 1_555 C DA 2 1_555 D DT 8 1_555 -0.249 -0.123 3.696 -0.362 -1.927 35.452 0.117 0.349 3.700 -3.162 0.594 35.505 40 CC_DT-6DA-5:DT5DA6_DD C -6 ? D 6 ? C -5 ? D 5 ? 1 C DA 2 1_555 D DT 8 1_555 C DT 3 1_555 D DA 7 1_555 -0.436 -0.159 3.169 -2.578 -0.058 31.807 -0.279 0.337 3.194 -0.105 4.695 31.909 41 CC_DA-5DT-4:DA4DT5_DD C -5 ? D 5 ? C -4 ? D 4 ? 1 C DT 3 1_555 D DA 7 1_555 C DT 4 1_555 D DA 6 1_555 -0.501 -0.192 3.369 -1.560 1.351 31.413 -0.614 0.624 3.378 2.491 2.877 31.479 42 CC_DT-4DT-3:DA3DA4_DD C -4 ? D 4 ? C -3 ? D 3 ? 1 C DT 4 1_555 D DA 6 1_555 C DG 5 1_555 D DC 5 1_555 0.637 1.876 3.325 -5.974 -4.416 43.114 2.932 -1.413 3.018 -5.956 8.057 43.719 43 CC_DT-3DG-2:DC2DA3_DD C -3 ? D 3 ? C -2 ? D 2 ? 1 C DG 5 1_555 D DC 5 1_555 C DA 6 1_555 D DT 4 1_555 0.915 -0.286 3.121 1.589 -0.942 34.090 -0.343 -1.316 3.165 -1.606 -2.707 34.138 44 CC_DG-2DA-1:DT1DC2_DD C -2 ? D 2 ? C -1 ? D 1 ? 1 C DA 6 1_555 D DT 4 1_555 C DT 7 1_555 D DA 3 1_555 0.834 -1.127 3.570 -1.386 -0.141 24.781 -2.576 -2.395 3.525 -0.327 3.227 24.819 45 CC_DA-1DT0:DA0DT1_DD C -1 ? D 1 ? C 0 ? D 0 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Science Foundation (NSF, United States)' 'United States' 'DGE 2334027' 1 'Swiss National Science Foundation' Switzerland P500PB_214418 2 # _atom_sites.entry_id 9YYG _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P S # loop_ #