HEADER HYDROLASE 03-NOV-25 9Z16 TITLE GH29A ALPHA-FUCOSIDASE FROM BACTEROIDES FRAGILIS IN COMPLEX WITH TITLE 2 DEOXYFUCONOJIRIMYCIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA-L-FUCOSIDASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES FRAGILIS; SOURCE 3 ORGANISM_TAXID: 817; SOURCE 4 GENE: F3B44_16755, FSA08_23345, O1420_06320; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 866768 KEYWDS GLYCOSIDE HYDROLASE, FUCOSIDASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.E.KOWALEWSKI,M.R.REDINBO REVDAT 1 11-NOV-26 9Z16 0 JRNL AUTH M.E.KOWALEWSKI,M.R.REDINBO JRNL TITL GUT MICROBIAL FUCOSIDASES CONTRIBUTE TO COLITIS THROUGH JRNL TITL 2 DIFFERENTIAL MUCIN GLYCAN PROCESSING JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.23 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.21.1_5286 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.23 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.22 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 60999 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.222 REMARK 3 R VALUE (WORKING SET) : 0.222 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.260 REMARK 3 FREE R VALUE TEST SET COUNT : 1989 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.2200 - 5.3700 1.00 4413 153 0.1535 0.1587 REMARK 3 2 5.3700 - 4.2700 1.00 4271 144 0.1511 0.1708 REMARK 3 3 4.2600 - 3.7300 1.00 4246 138 0.1774 0.1948 REMARK 3 4 3.7300 - 3.3900 1.00 4237 144 0.2288 0.2678 REMARK 3 5 3.3900 - 3.1400 1.00 4213 143 0.2612 0.3224 REMARK 3 6 3.1400 - 2.9600 1.00 4212 143 0.2976 0.3331 REMARK 3 7 2.9600 - 2.8100 1.00 4190 142 0.2904 0.3380 REMARK 3 8 2.8100 - 2.6900 1.00 4210 141 0.3089 0.3538 REMARK 3 9 2.6900 - 2.5800 1.00 4189 138 0.3271 0.3275 REMARK 3 10 2.5800 - 2.4900 1.00 4168 143 0.3540 0.3393 REMARK 3 11 2.4900 - 2.4200 1.00 4209 145 0.3307 0.3475 REMARK 3 12 2.4200 - 2.3500 1.00 4156 137 0.3393 0.3390 REMARK 3 13 2.3500 - 2.2900 1.00 4175 139 0.3500 0.3274 REMARK 3 14 2.2900 - 2.2300 0.99 4121 139 0.3642 0.3847 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.362 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.025 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 54.63 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 60.31 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 6827 REMARK 3 ANGLE : 1.050 9277 REMARK 3 CHIRALITY : 0.058 974 REMARK 3 PLANARITY : 0.008 1192 REMARK 3 DIHEDRAL : 14.704 2483 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9Z16 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-NOV-25. REMARK 100 THE DEPOSITION ID IS D_1000301800. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-AUG-25 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 61015 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.230 REMARK 200 RESOLUTION RANGE LOW (A) : 43.220 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 9.800 REMARK 200 R MERGE (I) : 0.09211 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.23 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.29 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.41200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.910 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: LITHIUM CITRATE TRIBASIC (0.2 M) AND REMARK 280 PEG3350 (20% W/V), VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 73.11333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 36.55667 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 36.55667 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 73.11333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A -27 REMARK 465 ALA A -26 REMARK 465 PHE A -25 REMARK 465 LEU A -24 REMARK 465 PHE A -23 REMARK 465 ILE A -22 REMARK 465 ILE A -21 REMARK 465 LEU A -20 REMARK 465 MET A -19 REMARK 465 LYS A -18 REMARK 465 LYS A -17 REMARK 465 HIS A -16 REMARK 465 PHE A -15 REMARK 465 ILE A -14 REMARK 465 THR A -13 REMARK 465 PHE A -12 REMARK 465 LEU A -11 REMARK 465 LEU A -10 REMARK 465 LEU A -9 REMARK 465 VAL A -8 REMARK 465 GLY A -7 REMARK 465 MET A -6 REMARK 465 THR A -5 REMARK 465 ALA A -4 REMARK 465 SER A -3 REMARK 465 LEU A -2 REMARK 465 THR A -1 REMARK 465 ALA A 0 REMARK 465 GLN A 1 REMARK 465 GLN A 2 REMARK 465 GLU B -27 REMARK 465 ALA B -26 REMARK 465 PHE B -25 REMARK 465 LEU B -24 REMARK 465 PHE B -23 REMARK 465 ILE B -22 REMARK 465 ILE B -21 REMARK 465 LEU B -20 REMARK 465 MET B -19 REMARK 465 LYS B -18 REMARK 465 LYS B -17 REMARK 465 HIS B -16 REMARK 465 PHE B -15 REMARK 465 ILE B -14 REMARK 465 THR B -13 REMARK 465 PHE B -12 REMARK 465 LEU B -11 REMARK 465 LEU B -10 REMARK 465 LEU B -9 REMARK 465 VAL B -8 REMARK 465 GLY B -7 REMARK 465 MET B -6 REMARK 465 THR B -5 REMARK 465 ALA B -4 REMARK 465 SER B -3 REMARK 465 LEU B -2 REMARK 465 THR B -1 REMARK 465 ALA B 0 REMARK 465 GLN B 1 REMARK 465 GLN B 2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 156 CG CD CE NZ REMARK 470 LYS A 372 CG CD CE NZ REMARK 470 LYS B 3 CG CD CE NZ REMARK 470 GLN B 5 CG CD OE1 NE2 REMARK 470 LYS B 156 CG CD CE NZ REMARK 470 LYS B 160 CG CD CE NZ REMARK 470 LYS B 372 CG CD CE NZ REMARK 470 LYS B 391 CG CD CE NZ REMARK 470 ASP B 414 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 724 O HOH A 731 1.91 REMARK 500 O HOH A 715 O HOH A 730 1.92 REMARK 500 O HOH A 716 O HOH A 732 2.01 REMARK 500 O HOH B 690 O HOH B 708 2.02 REMARK 500 OH TYR B 97 O HOH B 601 2.03 REMARK 500 O LEU A 398 O HOH A 601 2.07 REMARK 500 O HOH B 701 O HOH B 703 2.08 REMARK 500 O HOH A 738 O HOH A 743 2.13 REMARK 500 O TYR B 177 O HOH B 602 2.16 REMARK 500 O HOH B 604 O HOH B 623 2.17 REMARK 500 NH2 ARG B 85 O SER B 132 2.17 REMARK 500 N ALA B 399 O HOH B 603 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 718 O HOH B 691 4565 1.89 REMARK 500 O HOH A 727 O HOH B 637 4565 2.00 REMARK 500 O HOH B 687 O HOH B 687 5554 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 7 179.06 -57.86 REMARK 500 LYS A 21 -20.42 72.22 REMARK 500 TYR A 59 82.34 -150.44 REMARK 500 ASP A 64 91.60 -170.60 REMARK 500 ARG A 85 116.10 -165.18 REMARK 500 ARG A 236 28.74 49.64 REMARK 500 SER A 247 -130.48 -122.06 REMARK 500 ASN A 263 -140.25 -96.43 REMARK 500 ASN A 358 88.35 -151.72 REMARK 500 ASP A 370 55.94 -108.55 REMARK 500 LYS A 371 108.73 -167.75 REMARK 500 ALA A 376 115.23 -161.38 REMARK 500 LYS B 21 -32.78 69.95 REMARK 500 ARG B 85 118.84 -163.07 REMARK 500 ASN B 242 40.86 -162.92 REMARK 500 SER B 247 73.06 -153.52 REMARK 500 ASN B 263 -139.23 -105.30 REMARK 500 ASN B 274 66.37 -68.27 REMARK 500 ASP B 370 49.77 -98.24 REMARK 500 LYS B 374 -66.12 -90.33 REMARK 500 REMARK 500 REMARK: NULL DBREF 9Z16 A -19 414 UNP D1JSC1 D1JSC1_BACFG 1 434 DBREF 9Z16 B -19 414 UNP D1JSC1 D1JSC1_BACFG 1 434 SEQADV 9Z16 GLU A -27 UNP D1JSC1 EXPRESSION TAG SEQADV 9Z16 ALA A -26 UNP D1JSC1 EXPRESSION TAG SEQADV 9Z16 PHE A -25 UNP D1JSC1 EXPRESSION TAG SEQADV 9Z16 LEU A -24 UNP D1JSC1 EXPRESSION TAG SEQADV 9Z16 PHE A -23 UNP D1JSC1 EXPRESSION TAG SEQADV 9Z16 ILE A -22 UNP D1JSC1 EXPRESSION TAG SEQADV 9Z16 ILE A -21 UNP D1JSC1 EXPRESSION TAG SEQADV 9Z16 LEU A -20 UNP D1JSC1 EXPRESSION TAG SEQADV 9Z16 GLU B -27 UNP D1JSC1 EXPRESSION TAG SEQADV 9Z16 ALA B -26 UNP D1JSC1 EXPRESSION TAG SEQADV 9Z16 PHE B -25 UNP D1JSC1 EXPRESSION TAG SEQADV 9Z16 LEU B -24 UNP D1JSC1 EXPRESSION TAG SEQADV 9Z16 PHE B -23 UNP D1JSC1 EXPRESSION TAG SEQADV 9Z16 ILE B -22 UNP D1JSC1 EXPRESSION TAG SEQADV 9Z16 ILE B -21 UNP D1JSC1 EXPRESSION TAG SEQADV 9Z16 LEU B -20 UNP D1JSC1 EXPRESSION TAG SEQRES 1 A 442 GLU ALA PHE LEU PHE ILE ILE LEU MET LYS LYS HIS PHE SEQRES 2 A 442 ILE THR PHE LEU LEU LEU VAL GLY MET THR ALA SER LEU SEQRES 3 A 442 THR ALA GLN GLN LYS TYR GLN PRO THR GLU ALA ASN LEU SEQRES 4 A 442 LYS ALA ARG SER GLU PHE GLN ASP ASN LYS PHE GLY ILE SEQRES 5 A 442 PHE LEU HIS TRP GLY LEU TYR ALA MET LEU ALA THR GLY SEQRES 6 A 442 GLU TRP THR MET THR ASN ASN ASN LEU ASN TYR LYS GLU SEQRES 7 A 442 TYR ALA LYS LEU ALA GLY GLY PHE TYR PRO SER LYS PHE SEQRES 8 A 442 ASP ALA ASP LYS TRP VAL ALA ALA ILE LYS ALA SER GLY SEQRES 9 A 442 ALA LYS TYR ILE CYS PHE THR THR ARG HIS HIS GLU GLY SEQRES 10 A 442 PHE SER MET PHE ASP THR LYS TYR SER ASP TYR ASN ILE SEQRES 11 A 442 VAL LYS ALA THR PRO PHE LYS ARG ASP VAL VAL LYS GLU SEQRES 12 A 442 LEU ALA ASP ALA CYS ALA LYS HIS GLY ILE LYS LEU HIS SEQRES 13 A 442 PHE TYR TYR SER HIS ILE ASP TRP TYR ARG GLU ASP ALA SEQRES 14 A 442 PRO GLN GLY ARG THR GLY ARG ARG THR GLY ARG PRO ASN SEQRES 15 A 442 PRO LYS GLY ASP TRP LYS SER TYR TYR GLN PHE MET ASN SEQRES 16 A 442 ASN GLN LEU THR GLU LEU LEU THR ASN TYR GLY PRO ILE SEQRES 17 A 442 GLY ALA ILE TRP PHE ASP GLY TRP TRP ASP GLN ASP ILE SEQRES 18 A 442 ASN PRO ASP PHE ASP TRP GLU LEU PRO GLU GLN TYR ALA SEQRES 19 A 442 LEU ILE HIS ARG LEU GLN PRO ALA CYS LEU VAL GLY ASN SEQRES 20 A 442 ASN HIS HIS GLN THR PRO PHE ALA GLY GLU ASP ILE GLN SEQRES 21 A 442 ILE PHE GLU ARG ASP LEU PRO GLY GLU ASN THR ALA GLY SEQRES 22 A 442 LEU SER GLY GLN SER VAL SER HIS LEU PRO LEU GLU THR SEQRES 23 A 442 CYS GLU THR MET ASN GLY MET TRP GLY TYR LYS ILE THR SEQRES 24 A 442 ASP GLN ASN TYR LYS SER THR LYS THR LEU ILE HIS TYR SEQRES 25 A 442 LEU VAL LYS ALA ALA GLY LYS ASP ALA ASN LEU LEU MET SEQRES 26 A 442 ASN ILE GLY PRO GLN PRO ASP GLY GLU LEU PRO GLU VAL SEQRES 27 A 442 ALA VAL GLN ARG LEU LYS GLU VAL GLY GLU TRP MET SER SEQRES 28 A 442 LYS TYR GLY GLU THR ILE TYR GLY THR ARG GLY GLY LEU SEQRES 29 A 442 VAL ALA PRO HIS ASP TRP GLY VAL THR THR GLN LYS GLY SEQRES 30 A 442 ASN LYS LEU TYR VAL HIS ILE LEU ASN LEU GLN ASP LYS SEQRES 31 A 442 ALA LEU PHE LEU PRO ILE VAL ASP LYS LYS VAL LYS LYS SEQRES 32 A 442 ALA VAL VAL PHE ALA ASP LYS THR PRO VAL ARG PHE THR SEQRES 33 A 442 LYS ASN LYS GLU GLY ILE VAL LEU GLU LEU ALA LYS VAL SEQRES 34 A 442 PRO THR ASP VAL ASP TYR VAL VAL GLU LEU THR ILE ASP SEQRES 1 B 442 GLU ALA PHE LEU PHE ILE ILE LEU MET LYS LYS HIS PHE SEQRES 2 B 442 ILE THR PHE LEU LEU LEU VAL GLY MET THR ALA SER LEU SEQRES 3 B 442 THR ALA GLN GLN LYS TYR GLN PRO THR GLU ALA ASN LEU SEQRES 4 B 442 LYS ALA ARG SER GLU PHE GLN ASP ASN LYS PHE GLY ILE SEQRES 5 B 442 PHE LEU HIS TRP GLY LEU TYR ALA MET LEU ALA THR GLY SEQRES 6 B 442 GLU TRP THR MET THR ASN ASN ASN LEU ASN TYR LYS GLU SEQRES 7 B 442 TYR ALA LYS LEU ALA GLY GLY PHE TYR PRO SER LYS PHE SEQRES 8 B 442 ASP ALA ASP LYS TRP VAL ALA ALA ILE LYS ALA SER GLY SEQRES 9 B 442 ALA LYS TYR ILE CYS PHE THR THR ARG HIS HIS GLU GLY SEQRES 10 B 442 PHE SER MET PHE ASP THR LYS TYR SER ASP TYR ASN ILE SEQRES 11 B 442 VAL LYS ALA THR PRO PHE LYS ARG ASP VAL VAL LYS GLU SEQRES 12 B 442 LEU ALA ASP ALA CYS ALA LYS HIS GLY ILE LYS LEU HIS SEQRES 13 B 442 PHE TYR TYR SER HIS ILE ASP TRP TYR ARG GLU ASP ALA SEQRES 14 B 442 PRO GLN GLY ARG THR GLY ARG ARG THR GLY ARG PRO ASN SEQRES 15 B 442 PRO LYS GLY ASP TRP LYS SER TYR TYR GLN PHE MET ASN SEQRES 16 B 442 ASN GLN LEU THR GLU LEU LEU THR ASN TYR GLY PRO ILE SEQRES 17 B 442 GLY ALA ILE TRP PHE ASP GLY TRP TRP ASP GLN ASP ILE SEQRES 18 B 442 ASN PRO ASP PHE ASP TRP GLU LEU PRO GLU GLN TYR ALA SEQRES 19 B 442 LEU ILE HIS ARG LEU GLN PRO ALA CYS LEU VAL GLY ASN SEQRES 20 B 442 ASN HIS HIS GLN THR PRO PHE ALA GLY GLU ASP ILE GLN SEQRES 21 B 442 ILE PHE GLU ARG ASP LEU PRO GLY GLU ASN THR ALA GLY SEQRES 22 B 442 LEU SER GLY GLN SER VAL SER HIS LEU PRO LEU GLU THR SEQRES 23 B 442 CYS GLU THR MET ASN GLY MET TRP GLY TYR LYS ILE THR SEQRES 24 B 442 ASP GLN ASN TYR LYS SER THR LYS THR LEU ILE HIS TYR SEQRES 25 B 442 LEU VAL LYS ALA ALA GLY LYS ASP ALA ASN LEU LEU MET SEQRES 26 B 442 ASN ILE GLY PRO GLN PRO ASP GLY GLU LEU PRO GLU VAL SEQRES 27 B 442 ALA VAL GLN ARG LEU LYS GLU VAL GLY GLU TRP MET SER SEQRES 28 B 442 LYS TYR GLY GLU THR ILE TYR GLY THR ARG GLY GLY LEU SEQRES 29 B 442 VAL ALA PRO HIS ASP TRP GLY VAL THR THR GLN LYS GLY SEQRES 30 B 442 ASN LYS LEU TYR VAL HIS ILE LEU ASN LEU GLN ASP LYS SEQRES 31 B 442 ALA LEU PHE LEU PRO ILE VAL ASP LYS LYS VAL LYS LYS SEQRES 32 B 442 ALA VAL VAL PHE ALA ASP LYS THR PRO VAL ARG PHE THR SEQRES 33 B 442 LYS ASN LYS GLU GLY ILE VAL LEU GLU LEU ALA LYS VAL SEQRES 34 B 442 PRO THR ASP VAL ASP TYR VAL VAL GLU LEU THR ILE ASP HET DFU A 501 23 HET DFU B 501 23 HETNAM DFU (2S,3R,4S,5R)-2-METHYLPIPERIDINE-3,4,5-TRIOL HETSYN DFU DEOXYFUCONOJIRIMYCIN FORMUL 3 DFU 2(C6 H13 N O3) FORMUL 5 HOH *253(H2 O) HELIX 1 AA1 THR A 7 LYS A 21 1 15 HELIX 2 AA2 LEU A 30 ALA A 35 1 6 HELIX 3 AA3 TRP A 39 ASN A 44 1 6 HELIX 4 AA4 ASN A 47 LYS A 53 1 7 HELIX 5 AA5 LEU A 54 PHE A 58 5 5 HELIX 6 AA6 ASP A 64 ALA A 74 1 11 HELIX 7 AA7 ASN A 101 THR A 106 1 6 HELIX 8 AA8 ASP A 111 GLY A 124 1 14 HELIX 9 AA9 ASP A 158 TYR A 177 1 20 HELIX 10 AB1 TRP A 188 ASP A 192 5 5 HELIX 11 AB2 GLU A 200 GLN A 212 1 13 HELIX 12 AB3 SER A 277 LYS A 291 1 15 HELIX 13 AB4 PRO A 308 GLY A 326 1 19 HELIX 14 AB5 GLU A 327 ILE A 329 5 3 HELIX 15 AB6 THR B 7 LYS B 21 1 15 HELIX 16 AB7 LEU B 30 ALA B 35 1 6 HELIX 17 AB8 TRP B 39 ASN B 44 1 6 HELIX 18 AB9 ASN B 47 LYS B 53 1 7 HELIX 19 AC1 LEU B 54 PHE B 58 5 5 HELIX 20 AC2 ASP B 64 ALA B 74 1 11 HELIX 21 AC3 ASP B 111 GLY B 124 1 14 HELIX 22 AC4 ASP B 158 LEU B 174 1 17 HELIX 23 AC5 TRP B 188 ASP B 192 5 5 HELIX 24 AC6 GLU B 200 GLN B 212 1 13 HELIX 25 AC7 SER B 277 GLY B 290 1 14 HELIX 26 AC8 PRO B 308 GLY B 326 1 19 HELIX 27 AC9 GLU B 327 ILE B 329 5 3 SHEET 1 AA1 8 LEU A 216 ASN A 220 0 SHEET 2 AA1 8 ALA A 182 ASP A 186 1 N PHE A 185 O ASN A 220 SHEET 3 AA1 8 LYS A 126 SER A 132 1 N PHE A 129 O TRP A 184 SHEET 4 AA1 8 TYR A 79 ARG A 85 1 N PHE A 82 O TYR A 130 SHEET 5 AA1 8 PHE A 22 LEU A 26 1 N LEU A 26 O CYS A 81 SHEET 6 AA1 8 ALA A 293 ILE A 299 1 O ILE A 299 N PHE A 25 SHEET 7 AA1 8 LEU A 256 THR A 261 1 N GLU A 260 O ASN A 298 SHEET 8 AA1 8 GLN A 232 GLU A 235 1 N PHE A 234 O GLU A 257 SHEET 1 AA2 5 ARG A 333 GLY A 334 0 SHEET 2 AA2 5 GLY A 343 LYS A 348 -1 O GLN A 347 N ARG A 333 SHEET 3 AA2 5 LYS A 351 ILE A 356 -1 O TYR A 353 N THR A 346 SHEET 4 AA2 5 TYR A 407 ILE A 413 -1 O VAL A 409 N VAL A 354 SHEET 5 AA2 5 VAL A 373 VAL A 378 -1 N VAL A 377 O GLU A 410 SHEET 1 AA3 3 ALA A 363 LEU A 366 0 SHEET 2 AA3 3 GLY A 393 GLU A 397 -1 O LEU A 396 N LEU A 364 SHEET 3 AA3 3 PHE A 387 ASN A 390 -1 N ASN A 390 O GLY A 393 SHEET 1 AA4 8 LEU B 216 ASN B 220 0 SHEET 2 AA4 8 ALA B 182 ASP B 186 1 N ILE B 183 O LEU B 216 SHEET 3 AA4 8 LYS B 126 SER B 132 1 N PHE B 129 O TRP B 184 SHEET 4 AA4 8 TYR B 79 ARG B 85 1 N PHE B 82 O TYR B 130 SHEET 5 AA4 8 PHE B 22 LEU B 26 1 N LEU B 26 O CYS B 81 SHEET 6 AA4 8 ALA B 293 ILE B 299 1 O LEU B 295 N GLY B 23 SHEET 7 AA4 8 LEU B 256 THR B 261 1 N THR B 258 O LEU B 296 SHEET 8 AA4 8 GLN B 232 GLU B 235 1 N PHE B 234 O GLU B 257 SHEET 1 AA5 5 ARG B 333 GLY B 334 0 SHEET 2 AA5 5 GLY B 343 LYS B 348 -1 O GLN B 347 N ARG B 333 SHEET 3 AA5 5 LYS B 351 ILE B 356 -1 O TYR B 353 N THR B 346 SHEET 4 AA5 5 TYR B 407 ASP B 414 -1 O VAL B 409 N VAL B 354 SHEET 5 AA5 5 LYS B 372 VAL B 378 -1 N VAL B 377 O GLU B 410 SHEET 1 AA6 3 ALA B 363 LEU B 366 0 SHEET 2 AA6 3 ILE B 394 GLU B 397 -1 O ILE B 394 N LEU B 366 SHEET 3 AA6 3 PHE B 387 LYS B 389 -1 N THR B 388 O VAL B 395 CRYST1 140.451 140.451 109.670 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007120 0.004111 0.000000 0.00000 SCALE2 0.000000 0.008221 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009118 0.00000 CONECT 6618 6619 6627 6628 6629 CONECT 6619 6618 6620 6626 6630 CONECT 6620 6619 6621 6625 6631 CONECT 6621 6620 6622 6624 6632 CONECT 6622 6621 6623 6627 6633 CONECT 6623 6622 6634 6635 6636 CONECT 6624 6621 6637 CONECT 6625 6620 6638 CONECT 6626 6619 6639 CONECT 6627 6618 6622 6640 CONECT 6628 6618 CONECT 6629 6618 CONECT 6630 6619 CONECT 6631 6620 CONECT 6632 6621 CONECT 6633 6622 CONECT 6634 6623 CONECT 6635 6623 CONECT 6636 6623 CONECT 6637 6624 CONECT 6638 6625 CONECT 6639 6626 CONECT 6640 6627 CONECT 6641 6642 6650 6651 6652 CONECT 6642 6641 6643 6649 6653 CONECT 6643 6642 6644 6648 6654 CONECT 6644 6643 6645 6647 6655 CONECT 6645 6644 6646 6650 6656 CONECT 6646 6645 6657 6658 6659 CONECT 6647 6644 6660 CONECT 6648 6643 6661 CONECT 6649 6642 6662 CONECT 6650 6641 6645 6663 CONECT 6651 6641 CONECT 6652 6641 CONECT 6653 6642 CONECT 6654 6643 CONECT 6655 6644 CONECT 6656 6645 CONECT 6657 6646 CONECT 6658 6646 CONECT 6659 6646 CONECT 6660 6647 CONECT 6661 6648 CONECT 6662 6649 CONECT 6663 6650 MASTER 377 0 2 27 32 0 0 6 6888 2 46 68 END