HEADER DNA BINDING PROTEIN 03-NOV-25 9Z19 TITLE CRYSTAL STRUCTURE OF THE DNA PREQ0 INSERTASE DPDA BOUND TO PREQ0 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA-GUANINE TRANSGLYCOSYLASE; COMPND 3 CHAIN: A; COMPND 4 EC: 2.4.2.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR SOURCE 3 MONTEVIDEO; SOURCE 4 ORGANISM_TAXID: 115981; SOURCE 5 GENE: DPDA, TGTA5, SEEM315_10824; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PREQ0, 7-CYANO-7-DEAZAGUANINE, DPDA, 7-DEAZAPURINE IN DNA, DNA KEYWDS 2 BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR E.WOOD,M.A.SWAIRJO REVDAT 1 11-NOV-26 9Z19 0 JRNL AUTH E.WOOD,M.A.SWAIRJO JRNL TITL CRYSTAL STRUCTURE OF THE DNA PREQ0 INSERTASE DPDA BOUND TO JRNL TITL 2 PREQ0 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.66 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0430 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.66 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.16 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 59036 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3087 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.66 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.70 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4302 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.87 REMARK 3 BIN R VALUE (WORKING SET) : 0.3330 REMARK 3 BIN FREE R VALUE SET COUNT : 220 REMARK 3 BIN FREE R VALUE : 0.3760 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3376 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 56 REMARK 3 SOLVENT ATOMS : 320 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.16 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.35000 REMARK 3 B22 (A**2) : 0.08000 REMARK 3 B33 (A**2) : 0.27000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.090 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.090 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.078 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.098 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.969 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.961 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3666 ; 0.005 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 3434 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4956 ; 1.379 ; 1.848 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7902 ; 0.513 ; 1.785 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 451 ; 5.377 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 39 ; 6.501 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 641 ;12.799 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 516 ; 0.071 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4472 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 935 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1738 ; 1.624 ; 2.009 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1738 ; 1.623 ; 2.009 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2196 ; 2.663 ; 3.603 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2197 ; 2.662 ; 3.605 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1928 ; 2.324 ; 2.329 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1929 ; 2.324 ; 2.329 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2756 ; 3.837 ; 4.094 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 4230 ; 6.800 ;20.900 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 4161 ; 6.701 ;19.810 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 512 REMARK 3 ORIGIN FOR THE GROUP (A): 13.4690 86.4285 47.5035 REMARK 3 T TENSOR REMARK 3 T11: 0.0114 T22: 0.0100 REMARK 3 T33: 0.1121 T12: -0.0011 REMARK 3 T13: 0.0187 T23: -0.0242 REMARK 3 L TENSOR REMARK 3 L11: 1.5379 L22: 1.0569 REMARK 3 L33: 0.3750 L12: -0.7449 REMARK 3 L13: 0.1702 L23: -0.2598 REMARK 3 S TENSOR REMARK 3 S11: -0.0481 S12: -0.0972 S13: 0.1194 REMARK 3 S21: 0.1016 S22: 0.0194 S23: 0.0586 REMARK 3 S31: -0.0247 S32: -0.0275 S33: 0.0287 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 9Z19 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-NOV-25. REMARK 100 THE DEPOSITION ID IS D_1000301749. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-NOV-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.25 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00003 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 62189 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.660 REMARK 200 RESOLUTION RANGE LOW (A) : 47.030 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : 0.07900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.66 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.69 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 5.00 REMARK 200 R MERGE FOR SHELL (I) : 1.88200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: LARGE SINGLE CRYSTALS WERE GROWN AT REMARK 280 20C IN SITTING DROPS BY MIXING 2 UL OF SAMPLE CONTAINING 8 MG/ML REMARK 280 PROTEIN, 0.9 MM PREQ0, 30 MM KCL, 20 MM TRIS (PH 7.5) AND 2 MM REMARK 280 TCEP-HCL WITH 2 UL OF CRYSTALLIZATION SOLUTION CONTAINING 12 REMARK 280 PERCENT (W/V) POLYETHYLENE GLYCOL 3,350 AND 100 MM BIS-TRIS (PH REMARK 280 6.25). CRYSTALS WERE CRYOPROTECTED BY QUICK DIPPING IN A DROP OF REMARK 280 CRYSTALLIZATION SOLUTION SUPPLEMENTED WITH 35 PERCENT (V/V) REMARK 280 GLYCEROL, FOLLOWED BY FLASH COOLING IN LIQUID NITROGEN., VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 43.12250 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 70.54350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 43.12250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 70.54350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -7 REMARK 465 SER A -6 REMARK 465 HIS A -5 REMARK 465 MET A -4 REMARK 465 HIS A -3 REMARK 465 MET A -2 REMARK 465 ALA A -1 REMARK 465 SER A 0 REMARK 465 LEU A 1 REMARK 465 SER A 416 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 33 -58.20 78.12 REMARK 500 HIS A 45 75.27 -157.66 REMARK 500 ALA A 239 -103.56 -106.17 REMARK 500 ARG A 240 63.19 66.73 REMARK 500 PHE A 265 -3.61 -143.57 REMARK 500 ARG A 384 -104.86 -125.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 384 0.15 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 368 SG REMARK 620 2 CYS A 370 SG 107.9 REMARK 620 3 CYS A 373 SG 115.6 114.6 REMARK 620 4 HIS A 395 ND1 104.6 114.3 99.4 REMARK 620 N 1 2 3 DBREF 9Z19 A 2 416 UNP P0DW33 DPDA_SALMO 2 416 SEQADV 9Z19 GLY A -7 UNP P0DW33 EXPRESSION TAG SEQADV 9Z19 SER A -6 UNP P0DW33 EXPRESSION TAG SEQADV 9Z19 HIS A -5 UNP P0DW33 EXPRESSION TAG SEQADV 9Z19 MET A -4 UNP P0DW33 EXPRESSION TAG SEQADV 9Z19 HIS A -3 UNP P0DW33 EXPRESSION TAG SEQADV 9Z19 MET A -2 UNP P0DW33 EXPRESSION TAG SEQADV 9Z19 ALA A -1 UNP P0DW33 EXPRESSION TAG SEQADV 9Z19 SER A 0 UNP P0DW33 EXPRESSION TAG SEQADV 9Z19 LEU A 1 UNP P0DW33 EXPRESSION TAG SEQRES 1 A 424 GLY SER HIS MET HIS MET ALA SER LEU SER LYS LEU LYS SEQRES 2 A 424 TYR PHE PHE PRO ASP SER GLN ASP PHE ILE ASP PRO SER SEQRES 3 A 424 PHE ASP PHE VAL ARG GLU THR ARG ASN GLU HIS ARG VAL SEQRES 4 A 424 ARG GLN ARG ASP ASP HIS TYR PRO HIS GLU VAL PHE PRO SEQRES 5 A 424 HIS PRO TYR ASP GLY MET LEU VAL SER LYS ALA VAL VAL SEQRES 6 A 424 ASP GLY LEU GLY GLY GLY GLU SER LYS TYR THR ARG ALA SEQRES 7 A 424 GLN ARG LEU ARG TYR PHE ARG ASN GLY MET LYS HIS PHE SEQRES 8 A 424 PHE ARG LEU PRO ASP ASN MET GLN THR MET GLY ASP CYS SEQRES 9 A 424 GLY ALA PHE THR TYR VAL ASN GLN ASP VAL PRO PRO TYR SEQRES 10 A 424 ARG VAL GLU GLU VAL ILE GLU PHE TYR GLU THR SER ARG SEQRES 11 A 424 PHE ASN TYR GLY VAL SER LEU ASP HIS ILE ILE PHE GLY SEQRES 12 A 424 TYR GLU LYS PRO GLY GLU SER PHE SER GLY GLU VAL LEU SEQRES 13 A 424 ALA GLU CYS ARG ARG ARG GLN ASP ILE THR LEU THR LEU SEQRES 14 A 424 ALA GLN ASP PHE LEU VAL LYS SER GLN LYS SER CYS PHE SEQRES 15 A 424 THR PRO PHE GLY VAL ALA HIS GLY TRP ASN LYS LYS SER SEQRES 16 A 424 TYR ARG GLN SER VAL GLU ALA LEU LEU ALA MET GLY TYR SEQRES 17 A 424 LYS ASN ILE THR MET GLY GLY MET VAL PRO LEU LYS THR SEQRES 18 A 424 ALA GLN ILE LEU GLU THR LEU GLU GLU ILE LYS PRO LEU SEQRES 19 A 424 LEU LYS SER ASP THR GLN VAL HIS LEU LEU GLY ILE ALA SEQRES 20 A 424 ARG PRO GLU SER PHE ALA ASP PHE ILE ARG LEU GLY VAL SEQRES 21 A 424 THR SER ILE ASP SER THR THR PRO LEU GLN GLN ALA PHE SEQRES 22 A 424 LYS ASP ARG LYS ASN ASN TYR HIS THR PRO GLU GLY ARG SEQRES 23 A 424 ALA TYR THR ALA VAL ARG VAL PRO GLN PHE ASP ALA ASN SEQRES 24 A 424 PRO SER LEU SER ARG LYS ILE LYS SER GLY VAL ILE ASP SEQRES 25 A 424 GLN ASP VAL ALA ARG HIS LEU GLU LYS ASP ALA MET HIS SEQRES 26 A 424 ALA LEU PHE GLU TYR ASP ASN ASN ALA LEU SER LEU GLU SEQRES 27 A 424 LYS THR LEU GLU ALA VAL LEU ALA TYR GLU ARG LEU HIS SEQRES 28 A 424 SER GLY GLU LYS GLU ALA GLU LYS ILE ARG ALA ASP TYR SEQRES 29 A 424 GLU ARG THR LEU GLY ASP ARG PRO TRP ARG LYS CYS GLU SEQRES 30 A 424 CYS ASN ILE CYS ARG SER ILE GLY ILE ASN VAL ILE ILE SEQRES 31 A 424 PHE ARG GLY ALA GLU ARG ASN ARG ARG ARG GLY PHE HIS SEQRES 32 A 424 ASN ILE GLN VAL LEU TYR ASN ARG LEU GLN TYR THR LEU SEQRES 33 A 424 SER LEU ARG SER GLU ASP LYS SER HET PQ0 A 500 13 HET ZN A 501 1 HET GOL A 502 6 HET GOL A 503 6 HET EDO A 504 4 HET EDO A 505 4 HET EDO A 506 4 HET EDO A 507 4 HET EDO A 508 4 HET EDO A 509 4 HET CL A 510 1 HET CL A 511 1 HET EDO A 512 4 HETNAM PQ0 2-AMINO-4-OXO-4,7-DIHYDRO-3H-PYRROLO[2,3-D]PYRIMIDINE- HETNAM 2 PQ0 5-CARBONITRILE HETNAM ZN ZINC ION HETNAM GOL GLYCEROL HETNAM EDO 1,2-ETHANEDIOL HETNAM CL CHLORIDE ION HETSYN PQ0 7-DEAZA-7-CYANO-GUANINE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 PQ0 C7 H5 N5 O FORMUL 3 ZN ZN 2+ FORMUL 4 GOL 2(C3 H8 O3) FORMUL 6 EDO 7(C2 H6 O2) FORMUL 12 CL 2(CL 1-) FORMUL 15 HOH *320(H2 O) HELIX 1 AA1 TYR A 38 PHE A 43 1 6 HELIX 2 AA2 LYS A 54 GLY A 59 1 6 HELIX 3 AA3 THR A 68 GLY A 79 1 12 HELIX 4 AA4 GLY A 79 ARG A 85 1 7 HELIX 5 AA5 ARG A 110 ARG A 122 1 13 HELIX 6 AA6 SER A 144 SER A 169 1 26 HELIX 7 AA7 ASN A 184 GLY A 199 1 16 HELIX 8 AA8 LYS A 212 LYS A 224 1 13 HELIX 9 AA9 PRO A 225 LEU A 227 5 3 HELIX 10 AB1 ARG A 240 GLU A 242 5 3 HELIX 11 AB2 SER A 243 LEU A 250 1 8 HELIX 12 AB3 THR A 258 ASP A 267 1 10 HELIX 13 AB4 ASN A 291 SER A 300 1 10 HELIX 14 AB5 ASP A 304 ASN A 324 1 21 HELIX 15 AB6 SER A 328 GLY A 345 1 18 HELIX 16 AB7 GLY A 345 ARG A 363 1 19 HELIX 17 AB8 ARG A 363 CYS A 368 1 6 HELIX 18 AB9 ILE A 372 GLY A 377 1 6 HELIX 19 AC1 ILE A 378 VAL A 380 5 3 HELIX 20 AC2 GLY A 385 SER A 409 1 25 SHEET 1 AA1 9 LYS A 5 PRO A 9 0 SHEET 2 AA1 9 GLY A 49 SER A 53 1 O GLY A 49 N PHE A 8 SHEET 3 AA1 9 GLN A 91 ASP A 95 1 O MET A 93 N VAL A 52 SHEET 4 AA1 9 TYR A 125 VAL A 127 1 O TYR A 125 N GLY A 94 SHEET 5 AA1 9 THR A 175 ALA A 180 1 O PHE A 177 N GLY A 126 SHEET 6 AA1 9 ASN A 202 MET A 205 1 O THR A 204 N GLY A 178 SHEET 7 AA1 9 GLN A 232 LEU A 235 1 O HIS A 234 N MET A 205 SHEET 8 AA1 9 SER A 254 ASP A 256 1 O SER A 254 N LEU A 235 SHEET 9 AA1 9 LYS A 5 PRO A 9 1 N PHE A 7 O ILE A 255 SHEET 1 AA2 2 TYR A 272 HIS A 273 0 SHEET 2 AA2 2 ALA A 279 TYR A 280 -1 O TYR A 280 N TYR A 272 SHEET 1 AA3 2 VAL A 283 ARG A 284 0 SHEET 2 AA3 2 ILE A 382 PHE A 383 1 O PHE A 383 N VAL A 283 LINK SG CYS A 368 ZN ZN A 501 1555 1555 2.33 LINK SG CYS A 370 ZN ZN A 501 1555 1555 2.34 LINK SG CYS A 373 ZN ZN A 501 1555 1555 2.29 LINK ND1 HIS A 395 ZN ZN A 501 1555 1555 2.10 CRYST1 86.245 141.087 42.424 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011595 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007088 0.000000 0.00000 SCALE3 0.000000 0.000000 0.023572 0.00000 CONECT 3115 3540 CONECT 3130 3540 CONECT 3152 3540 CONECT 3334 3540 CONECT 3527 3528 3532 CONECT 3528 3527 3529 3539 CONECT 3529 3528 3530 CONECT 3530 3529 3531 3538 CONECT 3531 3530 3532 3534 CONECT 3532 3527 3531 3533 CONECT 3533 3532 CONECT 3534 3531 3535 3537 CONECT 3535 3534 3536 CONECT 3536 3535 CONECT 3537 3534 3538 CONECT 3538 3530 3537 CONECT 3539 3528 CONECT 3540 3115 3130 3152 3334 CONECT 3541 3542 3543 CONECT 3542 3541 CONECT 3543 3541 3544 3545 CONECT 3544 3543 CONECT 3545 3543 3546 CONECT 3546 3545 CONECT 3547 3548 3549 CONECT 3548 3547 CONECT 3549 3547 3550 3551 CONECT 3550 3549 CONECT 3551 3549 3552 CONECT 3552 3551 CONECT 3553 3554 3555 CONECT 3554 3553 CONECT 3555 3553 3556 CONECT 3556 3555 CONECT 3557 3558 3559 CONECT 3558 3557 CONECT 3559 3557 3560 CONECT 3560 3559 CONECT 3561 3562 3563 CONECT 3562 3561 CONECT 3563 3561 3564 CONECT 3564 3563 CONECT 3565 3566 3567 CONECT 3566 3565 CONECT 3567 3565 3568 CONECT 3568 3567 CONECT 3569 3570 3571 CONECT 3570 3569 CONECT 3571 3569 3572 CONECT 3572 3571 CONECT 3573 3574 3575 CONECT 3574 3573 CONECT 3575 3573 3576 CONECT 3576 3575 CONECT 3579 3580 3581 CONECT 3580 3579 CONECT 3581 3579 3582 CONECT 3582 3581 MASTER 328 0 13 20 13 0 0 6 3752 1 58 33 END