HEADER VIRAL PROTEIN/IMMUNE SYSTEM 26-NOV-25 9ZDU TITLE CRYSTAL STRUCTURE OF SARS-COV-2 RBD IN COMPLEX WITH HUMAN AB401 FAB COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPIKE PROTEIN S1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RECEPTOR-BINDING DOMAIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: AB401 FAB HEAVY CHAIN; COMPND 8 CHAIN: H; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: AB401 FAB LIGHT CHAIN; COMPND 12 CHAIN: L; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 3 2; SOURCE 4 ORGANISM_COMMON: SARS-COV-2, 2019-NCOV, COVID-19 VIRUS; SOURCE 5 ORGANISM_TAXID: 2697049; SOURCE 6 GENE: S, 2; SOURCE 7 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 8 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_COMMON: HUMAN; SOURCE 13 ORGANISM_TAXID: 9606; SOURCE 14 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 15 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 17 MOL_ID: 3; SOURCE 18 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 19 ORGANISM_COMMON: HUMAN; SOURCE 20 ORGANISM_TAXID: 9606; SOURCE 21 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 22 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 23 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS NEUTRALIZING ANTIBODY, VIRAL PROTEIN, IMMUNE SYSTEM, VIRAL PROTEIN- KEYWDS 2 IMMUNE SYSTEM COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR C.FAN,P.J.BJORKMAN REVDAT 1 22-APR-26 9ZDU 0 JRNL AUTH A.N.SKELLY,C.FAN,P.J.BJORKMAN,B.B.HAHN JRNL TITL MRNA DELIVERY OF A CLASS 1/4 SARS-COV-2 NEUTRALIZING JRNL TITL 2 ANTIBODY PROTECTS AGAINST DIVERSE SARBECOVIRUSES IN A LETHAL JRNL TITL 3 MOUSE CHALLENGE MODEL JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.21.2_5419 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.84 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 24680 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.222 REMARK 3 R VALUE (WORKING SET) : 0.219 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1998 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.8400 - 6.2500 1.00 1795 158 0.2117 0.2314 REMARK 3 2 6.2500 - 4.9700 1.00 1668 146 0.1942 0.2381 REMARK 3 3 4.9600 - 4.3400 1.00 1655 146 0.1619 0.1650 REMARK 3 4 4.3400 - 3.9400 1.00 1634 144 0.1891 0.2189 REMARK 3 5 3.9400 - 3.6600 1.00 1621 143 0.2055 0.2602 REMARK 3 6 3.6600 - 3.4400 1.00 1610 141 0.2132 0.2726 REMARK 3 7 3.4400 - 3.2700 1.00 1607 142 0.2402 0.3105 REMARK 3 8 3.2700 - 3.1300 1.00 1609 141 0.2810 0.2738 REMARK 3 9 3.1300 - 3.0100 1.00 1587 141 0.2757 0.3593 REMARK 3 10 3.0100 - 2.9000 1.00 1597 140 0.2617 0.3137 REMARK 3 11 2.9000 - 2.8100 1.00 1575 139 0.2620 0.2867 REMARK 3 12 2.8100 - 2.7300 1.00 1606 141 0.2707 0.3161 REMARK 3 13 2.7300 - 2.6600 1.00 1581 140 0.3125 0.3565 REMARK 3 14 2.6600 - 2.6000 0.97 1537 136 0.3708 0.4109 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.370 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.235 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 57.35 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 62.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 5101 REMARK 3 ANGLE : 0.480 6935 REMARK 3 CHIRALITY : 0.041 756 REMARK 3 PLANARITY : 0.004 897 REMARK 3 DIHEDRAL : 4.759 728 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 15.2671 -33.4227 -3.0689 REMARK 3 T TENSOR REMARK 3 T11: 0.3656 T22: 0.3948 REMARK 3 T33: 0.3489 T12: -0.0466 REMARK 3 T13: -0.0263 T23: -0.0437 REMARK 3 L TENSOR REMARK 3 L11: 1.2361 L22: 0.2026 REMARK 3 L33: 0.1331 L12: 0.0856 REMARK 3 L13: -0.5753 L23: -0.1731 REMARK 3 S TENSOR REMARK 3 S11: 0.0006 S12: 0.0536 S13: 0.0358 REMARK 3 S21: -0.0262 S22: 0.0111 S23: -0.0096 REMARK 3 S31: -0.0124 S32: 0.0011 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9ZDU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-DEC-25. REMARK 100 THE DEPOSITION ID IS D_1000302392. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-FEB-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 2.0.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0358 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45462 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 45.840 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.17560 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.4 REMARK 200 DATA REDUNDANCY IN SHELL : 6.30 REMARK 200 R MERGE FOR SHELL (I) : 1.97300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.810 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.42 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.58 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM PHOSPHATE MONOBASIC 20% REMARK 280 PEG 3350, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 108.85300 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 41.80600 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 41.80600 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 163.27950 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 41.80600 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 41.80600 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 54.42650 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 41.80600 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 41.80600 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 163.27950 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 41.80600 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 41.80600 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 54.42650 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 108.85300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 328 REMARK 465 PHE A 329 REMARK 465 PRO A 330 REMARK 465 ASN A 331 REMARK 465 ILE A 332 REMARK 465 SER A 530 REMARK 465 THR A 531 REMARK 465 ASN A 532 REMARK 465 LEU A 533 REMARK 465 HIS A 534 REMARK 465 HIS A 535 REMARK 465 HIS A 536 REMARK 465 HIS A 537 REMARK 465 HIS A 538 REMARK 465 HIS A 539 REMARK 465 SER H 215 REMARK 465 CYS H 216 REMARK 465 ASP H 217 REMARK 465 LYS H 218 REMARK 465 THR H 219 REMARK 465 HIS H 220 REMARK 465 HIS H 221 REMARK 465 HIS H 222 REMARK 465 HIS H 223 REMARK 465 HIS H 224 REMARK 465 HIS H 225 REMARK 465 CYS L 213 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS H 64 O ALA L 111 3444 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 352 56.95 -98.90 REMARK 500 ASN A 422 -50.30 -121.42 REMARK 500 ASP H 144 61.58 61.84 REMARK 500 SER L 30 -126.45 54.88 REMARK 500 ALA L 51 -7.86 71.56 REMARK 500 ASN L 137 66.38 60.05 REMARK 500 REMARK 500 REMARK: NULL DBREF 9ZDU A 328 533 UNP P0DTC2 SPIKE_SARS2 328 533 DBREF 9ZDU H 1 225 PDB 9ZDU 9ZDU 1 225 DBREF 9ZDU L 1 213 PDB 9ZDU 9ZDU 1 213 SEQADV 9ZDU HIS A 534 UNP P0DTC2 EXPRESSION TAG SEQADV 9ZDU HIS A 535 UNP P0DTC2 EXPRESSION TAG SEQADV 9ZDU HIS A 536 UNP P0DTC2 EXPRESSION TAG SEQADV 9ZDU HIS A 537 UNP P0DTC2 EXPRESSION TAG SEQADV 9ZDU HIS A 538 UNP P0DTC2 EXPRESSION TAG SEQADV 9ZDU HIS A 539 UNP P0DTC2 EXPRESSION TAG SEQRES 1 A 212 ARG PHE PRO ASN ILE THR ASN LEU CYS PRO PHE GLY GLU SEQRES 2 A 212 VAL PHE ASN ALA THR ARG PHE ALA SER VAL TYR ALA TRP SEQRES 3 A 212 ASN ARG LYS ARG ILE SER ASN CYS VAL ALA ASP TYR SER SEQRES 4 A 212 VAL LEU TYR ASN SER ALA SER PHE SER THR PHE LYS CYS SEQRES 5 A 212 TYR GLY VAL SER PRO THR LYS LEU ASN ASP LEU CYS PHE SEQRES 6 A 212 THR ASN VAL TYR ALA ASP SER PHE VAL ILE ARG GLY ASP SEQRES 7 A 212 GLU VAL ARG GLN ILE ALA PRO GLY GLN THR GLY LYS ILE SEQRES 8 A 212 ALA ASP TYR ASN TYR LYS LEU PRO ASP ASP PHE THR GLY SEQRES 9 A 212 CYS VAL ILE ALA TRP ASN SER ASN ASN LEU ASP SER LYS SEQRES 10 A 212 VAL GLY GLY ASN TYR ASN TYR LEU TYR ARG LEU PHE ARG SEQRES 11 A 212 LYS SER ASN LEU LYS PRO PHE GLU ARG ASP ILE SER THR SEQRES 12 A 212 GLU ILE TYR GLN ALA GLY SER THR PRO CYS ASN GLY VAL SEQRES 13 A 212 GLU GLY PHE ASN CYS TYR PHE PRO LEU GLN SER TYR GLY SEQRES 14 A 212 PHE GLN PRO THR ASN GLY VAL GLY TYR GLN PRO TYR ARG SEQRES 15 A 212 VAL VAL VAL LEU SER PHE GLU LEU LEU HIS ALA PRO ALA SEQRES 16 A 212 THR VAL CYS GLY PRO LYS LYS SER THR ASN LEU HIS HIS SEQRES 17 A 212 HIS HIS HIS HIS SEQRES 1 H 241 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL LYS SEQRES 2 H 241 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 H 241 PHE ILE PHE SER SER TYR THR MET ASN TRP VAL ARG GLN SEQRES 4 H 241 ALA PRO GLY LYS GLY PRO GLU TRP VAL SER GLN ILE SER SEQRES 5 H 241 ASP SER GLY SER ASP MET TYR TYR ALA ASP SER VAL LYS SEQRES 6 H 241 GLY ARG PHE SER ILE SER ARG ASP ASN ALA LYS ASN SER SEQRES 7 H 241 LEU TYR LEU ARG MET ASN SER LEU LYS VAL GLU ASP THR SEQRES 8 H 241 ALA VAL TYR TYR CYS ALA ARG VAL PRO ARG PHE TYR TYR SEQRES 9 H 241 ASP ARG SER GLY THR PRO ILE TYR GLU TYR TYR PHE ASP SEQRES 10 H 241 TYR TRP GLY GLN GLY ILE LEU VAL THR VAL SER SER ALA SEQRES 11 H 241 SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SER SEQRES 12 H 241 SER LYS SER THR SER GLY GLY THR ALA ALA LEU GLY CYS SEQRES 13 H 241 LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SER SEQRES 14 H 241 TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS THR PHE SEQRES 15 H 241 PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER LEU SER SEQRES 16 H 241 SER VAL VAL THR VAL PRO SER SER SER LEU GLY THR GLN SEQRES 17 H 241 THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER ASN THR SEQRES 18 H 241 LYS VAL ASP LYS ARG VAL GLU PRO LYS SER CYS ASP LYS SEQRES 19 H 241 THR HIS HIS HIS HIS HIS HIS SEQRES 1 L 214 GLN ILE VAL MET MET GLN SER PRO ALA THR LEU SER VAL SEQRES 2 L 214 SER PRO GLY GLU ARG ALA THR LEU SER CYS ARG ALA SER SEQRES 3 L 214 GLN SER VAL SER GLY ASN LEU ALA TRP TYR GLN GLN ASN SEQRES 4 L 214 PRO GLY GLN ALA PRO ARG LEU LEU ILE TYR ASP ALA SER SEQRES 5 L 214 THR ARG ALA THR GLY ILE PRO ASP ARG PHE SER GLY SER SEQRES 6 L 214 GLY SER GLY THR GLU PHE THR LEU THR ILE SER SER LEU SEQRES 7 L 214 GLN SER GLU ASP PHE ALA VAL TYR PHE CYS GLN GLN TYR SEQRES 8 L 214 ASN ASP TRP ARG GLN LEU THR PHE GLY GLY GLY THR LYS SEQRES 9 L 214 VAL GLU ILE GLU THR VAL ALA ALA PRO SER VAL PHE ILE SEQRES 10 L 214 PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SEQRES 11 L 214 SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU SEQRES 12 L 214 ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER SEQRES 13 L 214 GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS SEQRES 14 L 214 ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SER SEQRES 15 L 214 LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU SEQRES 16 L 214 VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER SEQRES 17 L 214 PHE ASN ARG GLY GLU CYS HET NAG A 601 14 HET PO4 A 602 5 HET PEG L 300 7 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM PO4 PHOSPHATE ION HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 4 NAG C8 H15 N O6 FORMUL 5 PO4 O4 P 3- FORMUL 6 PEG C4 H10 O3 FORMUL 7 HOH *49(H2 O) HELIX 1 AA1 PRO A 337 ASN A 343 1 7 HELIX 2 AA2 TYR A 365 ASN A 370 1 6 HELIX 3 AA3 SER A 383 ASP A 389 5 7 HELIX 4 AA4 ASP A 405 ILE A 410 5 6 HELIX 5 AA5 GLY A 416 ASN A 422 1 7 HELIX 6 AA6 SER A 438 SER A 443 1 6 HELIX 7 AA7 ILE H 28 TYR H 32 5 5 HELIX 8 AA8 LYS H 83 THR H 87 5 5 HELIX 9 AA9 SER H 127 LYS H 129 5 3 HELIX 10 AB1 SER H 156 ALA H 158 5 3 HELIX 11 AB2 SER H 187 LEU H 189 5 3 HELIX 12 AB3 LYS H 201 ASN H 204 5 4 HELIX 13 AB4 SER L 120 GLY L 127 1 8 HELIX 14 AB5 LYS L 182 LYS L 187 1 6 SHEET 1 AA1 5 ASN A 354 ILE A 358 0 SHEET 2 AA1 5 ASN A 394 ARG A 403 -1 O VAL A 395 N ILE A 358 SHEET 3 AA1 5 PRO A 507 GLU A 516 -1 O VAL A 512 N ASP A 398 SHEET 4 AA1 5 GLY A 431 ASN A 437 -1 N ILE A 434 O VAL A 511 SHEET 5 AA1 5 THR A 376 TYR A 380 -1 N LYS A 378 O VAL A 433 SHEET 1 AA2 3 CYS A 361 VAL A 362 0 SHEET 2 AA2 3 VAL A 524 CYS A 525 1 O CYS A 525 N CYS A 361 SHEET 3 AA2 3 CYS A 391 PHE A 392 -1 N PHE A 392 O VAL A 524 SHEET 1 AA3 2 LEU A 452 ARG A 454 0 SHEET 2 AA3 2 LEU A 492 SER A 494 -1 O GLN A 493 N TYR A 453 SHEET 1 AA4 2 TYR A 473 GLN A 474 0 SHEET 2 AA4 2 CYS A 488 TYR A 489 -1 O TYR A 489 N TYR A 473 SHEET 1 AA5 4 GLN H 3 SER H 7 0 SHEET 2 AA5 4 LEU H 18 SER H 25 -1 O SER H 21 N SER H 7 SHEET 3 AA5 4 SER H 77 MET H 82 -1 O MET H 82 N LEU H 18 SHEET 4 AA5 4 PHE H 67 ASP H 72 -1 N SER H 70 O TYR H 79 SHEET 1 AA6 6 GLY H 10 VAL H 12 0 SHEET 2 AA6 6 ILE H 107 VAL H 111 1 O THR H 110 N VAL H 12 SHEET 3 AA6 6 ALA H 88 ARG H 94 -1 N ALA H 88 O VAL H 109 SHEET 4 AA6 6 MET H 34 GLN H 39 -1 N VAL H 37 O TYR H 91 SHEET 5 AA6 6 PRO H 45 ILE H 51 -1 O VAL H 48 N TRP H 36 SHEET 6 AA6 6 MET H 57 TYR H 59 -1 O TYR H 58 N GLN H 50 SHEET 1 AA7 4 GLY H 10 VAL H 12 0 SHEET 2 AA7 4 ILE H 107 VAL H 111 1 O THR H 110 N VAL H 12 SHEET 3 AA7 4 ALA H 88 ARG H 94 -1 N ALA H 88 O VAL H 109 SHEET 4 AA7 4 TYR H 102 TRP H 103 -1 O TYR H 102 N ARG H 94 SHEET 1 AA8 2 TYR H 99 TYR H 100 0 SHEET 2 AA8 2 PRO H 100F ILE H 100G-1 O ILE H 100G N TYR H 99 SHEET 1 AA9 4 SER H 120 LEU H 124 0 SHEET 2 AA9 4 THR H 135 TYR H 145 -1 O GLY H 139 N LEU H 124 SHEET 3 AA9 4 TYR H 176 PRO H 185 -1 O LEU H 178 N VAL H 142 SHEET 4 AA9 4 VAL H 163 THR H 165 -1 N HIS H 164 O VAL H 181 SHEET 1 AB1 4 THR H 131 SER H 132 0 SHEET 2 AB1 4 THR H 135 TYR H 145 -1 O THR H 135 N SER H 132 SHEET 3 AB1 4 TYR H 176 PRO H 185 -1 O LEU H 178 N VAL H 142 SHEET 4 AB1 4 VAL H 169 LEU H 170 -1 N VAL H 169 O SER H 177 SHEET 1 AB2 3 THR H 151 TRP H 154 0 SHEET 2 AB2 3 TYR H 194 HIS H 200 -1 O ASN H 197 N SER H 153 SHEET 3 AB2 3 THR H 205 VAL H 211 -1 O VAL H 211 N TYR H 194 SHEET 1 AB3 4 MET L 4 SER L 7 0 SHEET 2 AB3 4 ALA L 19 ALA L 25 -1 O ARG L 24 N MET L 5 SHEET 3 AB3 4 GLU L 70 ILE L 75 -1 O PHE L 71 N CYS L 23 SHEET 4 AB3 4 PHE L 62 SER L 67 -1 N SER L 65 O THR L 72 SHEET 1 AB4 6 THR L 10 SER L 12 0 SHEET 2 AB4 6 THR L 102 GLU L 105 1 O LYS L 103 N LEU L 11 SHEET 3 AB4 6 VAL L 85 GLN L 90 -1 N TYR L 86 O THR L 102 SHEET 4 AB4 6 LEU L 33 GLN L 38 -1 N TYR L 36 O PHE L 87 SHEET 5 AB4 6 ARG L 45 TYR L 49 -1 O ARG L 45 N GLN L 37 SHEET 6 AB4 6 THR L 53 ARG L 54 -1 O THR L 53 N TYR L 49 SHEET 1 AB5 4 THR L 10 SER L 12 0 SHEET 2 AB5 4 THR L 102 GLU L 105 1 O LYS L 103 N LEU L 11 SHEET 3 AB5 4 VAL L 85 GLN L 90 -1 N TYR L 86 O THR L 102 SHEET 4 AB5 4 THR L 97 PHE L 98 -1 O THR L 97 N GLN L 90 SHEET 1 AB6 4 SER L 113 PHE L 117 0 SHEET 2 AB6 4 THR L 128 PHE L 138 -1 O LEU L 134 N PHE L 115 SHEET 3 AB6 4 TYR L 172 SER L 181 -1 O LEU L 174 N LEU L 135 SHEET 4 AB6 4 SER L 158 VAL L 162 -1 N GLN L 159 O THR L 177 SHEET 1 AB7 4 ALA L 152 LEU L 153 0 SHEET 2 AB7 4 LYS L 144 VAL L 149 -1 N VAL L 149 O ALA L 152 SHEET 3 AB7 4 VAL L 190 THR L 196 -1 O GLU L 194 N GLN L 146 SHEET 4 AB7 4 VAL L 204 ASN L 209 -1 O LYS L 206 N CYS L 193 SSBOND 1 CYS A 336 CYS A 361 1555 1555 2.03 SSBOND 2 CYS A 379 CYS A 432 1555 1555 2.03 SSBOND 3 CYS A 391 CYS A 525 1555 1555 2.03 SSBOND 4 CYS A 480 CYS A 488 1555 1555 2.03 SSBOND 5 CYS H 22 CYS H 92 1555 1555 2.04 SSBOND 6 CYS H 140 CYS H 196 1555 1555 2.03 SSBOND 7 CYS L 23 CYS L 88 1555 1555 2.04 SSBOND 8 CYS L 133 CYS L 193 1555 1555 2.03 LINK ND2 ASN A 343 C1 NAG A 601 1555 1555 1.44 CISPEP 1 PHE H 146 PRO H 147 0 -5.82 CISPEP 2 GLU H 148 PRO H 149 0 -0.93 CISPEP 3 SER L 7 PRO L 8 0 -4.45 CISPEP 4 TYR L 139 PRO L 140 0 6.10 CRYST1 83.612 83.612 217.706 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011960 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011960 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004593 0.00000 CONECT 29 236 CONECT 86 4956 CONECT 236 29 CONECT 376 789 CONECT 466 1532 CONECT 789 376 CONECT 1180 1237 CONECT 1237 1180 CONECT 1532 466 CONECT 1713 2297 CONECT 2297 1713 CONECT 2752 3166 CONECT 3166 2752 CONECT 3477 3972 CONECT 3972 3477 CONECT 4330 4809 CONECT 4809 4330 CONECT 4956 86 4957 4967 CONECT 4957 4956 4958 4964 CONECT 4958 4957 4959 4965 CONECT 4959 4958 4960 4966 CONECT 4960 4959 4961 4967 CONECT 4961 4960 4968 CONECT 4962 4963 4964 4969 CONECT 4963 4962 CONECT 4964 4957 4962 CONECT 4965 4958 CONECT 4966 4959 CONECT 4967 4956 4960 CONECT 4968 4961 CONECT 4969 4962 CONECT 4970 4971 4972 4973 4974 CONECT 4971 4970 CONECT 4972 4970 CONECT 4973 4970 CONECT 4974 4970 CONECT 4975 4976 4977 CONECT 4976 4975 CONECT 4977 4975 4978 CONECT 4978 4977 4979 CONECT 4979 4978 4980 CONECT 4980 4979 4981 CONECT 4981 4980 MASTER 307 0 3 14 61 0 0 6 5021 3 43 53 END