HEADER VIRUS LIKE PARTICLE 31-DEC-25 9ZW4 TITLE QUASIBACILLUS THERMOTOLERANS T=3 ENCAPSULIN PORE MUTANT VARIANT TITLE 2 LETTER11 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYPE 1 ENCAPSULIN SHELL PROTEIN; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: IMEF ENCAPSULIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS THERMOTOLERANS; SOURCE 3 ORGANISM_TAXID: 1221996; SOURCE 4 GENE: ENC, QY95_01592; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS ENCAPSULIN, PROTEIN NANOCOMPARTMENT, VIRUS LIKE PARTICLE EXPDTA ELECTRON MICROSCOPY AUTHOR M.P.ANDREAS,R.SIDDIQUEE,T.W.GIESSEN,Y.H.LAU REVDAT 1 01-JUL-26 9ZW4 0 JRNL AUTH R.SIDDIQUEE,F.LIE,T.N.SZYSZKA,A.LOUSTAU,M.P.ANDREAS, JRNL AUTH 2 T.W.GIESSEN,Y.H.LAU JRNL TITL DIRECTED EVOLUTION OF MULTIMERIC PROTEINS IS ENABLED BY JRNL TITL 2 DUAL-COMPENSATORY GENE DUPLICATION. JRNL REF BIORXIV 2026 JRNL REFN ISSN 2692-8205 JRNL PMID 41648261 JRNL DOI 10.64898/2026.01.12.698938 REMARK 2 REMARK 2 RESOLUTION. 2.42 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CRYOSPARC, SERIALEM, CRYOSPARC, UCSF REMARK 3 CHIMERAX, CRYOSPARC, CRYOSPARC, REMARK 3 CRYOSPARC, COOT, PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : FLEXIBLE FIT REMARK 3 REFINEMENT TARGET : CROSS-CORRELATION COEFFICIENT REMARK 3 OVERALL ANISOTROPIC B VALUE : 71.200 REMARK 3 REMARK 3 FITTING PROCEDURE : A STARTING MODEL OF A SINGLE PROTOMER WAS REMARK 3 GENERATED USING ALPHAFOLD 3, AND INDIVIDUAL PROTOMERS WERE FIT REMARK 3 INTO THE VOLUME OF AN ASYMMETRIC UNIT USING UCSF CHIMERAX V 1.8. REMARK 3 THE MODEL CONTAINING A SINGLE ASYMMETRIC UNIT CONSISTING OF REMARK 3 THREE PROTOMERS WAS THEN MANUALLY REFINED USING COOT V 0.9.8.1, REMARK 3 FOLLOWED BY REAL-SPACE REFINEMENT IN PHENIX V 1.20.1-4487-000. REMARK 3 NON-CRYSTALLOGRAPHIC SYMMETRY (NCS) OPERATORS WERE THEN APPLIED REMARK 3 TO GENERATE A COMPLETE NCS-EXPANDED SHELL, WHICH WAS REFINED REMARK 3 AGAINST THE MAP USING PHENIX REAL-SPACE REFINEMENT. REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.420 REMARK 3 NUMBER OF PARTICLES : 18327 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: THE FINAL MAP WAS GENERATED USING HOMOGENEOUS REMARK 3 REFINEMENT AGAINST THE AB-INITIO MAP WITH I SYMMETRY IMPOSED, REMARK 3 PER-PARTICLE DEFOCUS OPTIMIZATION, PER-GROUP CTF REMARK 3 PARAMETERIZATION, SPHERICAL ABERRATION FITTING ENABLED, REMARK 3 TETRAFOIL FITTING ENABLED, ANISOTROPIC MAGNIFICATION FITTING REMARK 3 ENABLED, AND EWALD SPHERE CORRECTING ENABLED WITH A NEGATIVE REMARK 3 CURVATURE SIGN. REMARK 4 REMARK 4 9ZW4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-JAN-26. REMARK 100 THE DEPOSITION ID IS D_1000303867. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : QUASIBACILLUS THERMOTOLERANS REMARK 245 T=3 ENCAPSULIN PORE MUTANT REMARK 245 VARIANT LETTER11 REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 4.50 REMARK 245 SAMPLE SUPPORT DETAILS : THE GRID WAS GLOW DISCHARGED AT REMARK 245 5 MA FOR 60 SECONDS UNDER REMARK 245 VACUUM. REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 8.00 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 1565 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 BIOQUANTUM (6K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 800.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 1200.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5150.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 ICOSAHEDRAL POINT SYMMETRY (SCHOENFLIES SYMBOL = I). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.309017 -0.809018 0.499998 285.22872 REMARK 350 BIOMT2 2 0.809018 0.499999 0.309016 -176.27971 REMARK 350 BIOMT3 2 -0.499998 0.309017 0.809018 108.94606 REMARK 350 BIOMT1 3 -0.809017 -0.500000 0.309017 570.45555 REMARK 350 BIOMT2 3 0.500001 -0.309021 0.809015 0.00202 REMARK 350 BIOMT3 3 -0.309015 0.809015 0.500004 -0.00168 REMARK 350 BIOMT1 4 -0.809017 0.500001 -0.309015 461.50671 REMARK 350 BIOMT2 4 -0.500000 -0.309021 0.809015 285.22982 REMARK 350 BIOMT3 4 0.309017 0.809015 0.500004 -176.28115 REMARK 350 BIOMT1 5 0.309017 0.809018 -0.499998 108.94579 REMARK 350 BIOMT2 5 -0.809018 0.499999 0.309017 285.22857 REMARK 350 BIOMT3 5 0.499998 0.309016 0.809018 -176.28011 REMARK 350 BIOMT1 6 -1.000000 0.000000 0.000004 570.45394 REMARK 350 BIOMT2 6 0.000000 -1.000000 -0.000005 570.45808 REMARK 350 BIOMT3 6 0.000004 -0.000005 1.000000 0.00006 REMARK 350 BIOMT1 7 -0.309019 0.809019 -0.499995 285.22570 REMARK 350 BIOMT2 7 -0.809016 -0.500000 -0.309019 746.73728 REMARK 350 BIOMT3 7 -0.500000 0.309011 0.809019 108.94823 REMARK 350 BIOMT1 8 0.809016 0.500004 -0.309015 -0.00161 REMARK 350 BIOMT2 8 -0.500000 0.309017 -0.809017 570.45607 REMARK 350 BIOMT3 8 -0.309021 0.809015 0.500001 0.00094 REMARK 350 BIOMT1 9 0.809018 -0.499998 0.309017 108.94644 REMARK 350 BIOMT2 9 0.499999 0.309017 -0.809018 285.22909 REMARK 350 BIOMT3 9 0.309016 0.809018 0.499999 -176.28036 REMARK 350 BIOMT1 10 -0.309015 -0.809017 0.500001 461.50736 REMARK 350 BIOMT2 10 0.809016 -0.500000 -0.309021 285.23034 REMARK 350 BIOMT3 10 0.500004 0.309017 0.809015 -176.28090 REMARK 350 BIOMT1 11 -1.000000 -0.000005 0.000000 570.45658 REMARK 350 BIOMT2 11 -0.000005 1.000000 0.000005 0.00002 REMARK 350 BIOMT3 11 0.000000 0.000005 -1.000000 570.45470 REMARK 350 BIOMT1 12 -0.309021 0.809016 -0.500000 285.22870 REMARK 350 BIOMT2 12 0.809015 0.500004 0.309017 -176.28054 REMARK 350 BIOMT3 12 0.500002 -0.309015 -0.809017 461.50781 REMARK 350 BIOMT1 13 0.809015 0.500002 -0.309021 0.00103 REMARK 350 BIOMT2 13 0.500004 -0.309015 0.809016 -0.00069 REMARK 350 BIOMT3 13 0.309017 -0.809017 -0.500000 570.45638 REMARK 350 BIOMT1 14 0.809019 -0.500000 0.309011 108.94851 REMARK 350 BIOMT2 14 -0.499995 -0.309019 0.809019 285.22681 REMARK 350 BIOMT3 14 -0.309019 -0.809016 -0.500000 746.73719 REMARK 350 BIOMT1 15 -0.309013 -0.809021 0.499996 461.50943 REMARK 350 BIOMT2 15 -0.809017 0.499996 0.309023 285.22725 REMARK 350 BIOMT3 15 -0.500002 -0.309013 -0.809017 746.73615 REMARK 350 BIOMT1 16 1.000000 0.000005 -0.000004 -0.00009 REMARK 350 BIOMT2 16 0.000005 -1.000000 0.000000 570.45538 REMARK 350 BIOMT3 16 -0.000004 0.000000 -1.000000 570.45732 REMARK 350 BIOMT1 17 0.309023 -0.809017 0.499996 285.22730 REMARK 350 BIOMT2 17 -0.809017 -0.500002 -0.309013 746.73645 REMARK 350 BIOMT3 17 0.499996 -0.309013 -0.809021 461.50998 REMARK 350 BIOMT1 18 -0.809013 -0.500005 0.309018 570.45546 REMARK 350 BIOMT2 18 -0.500005 0.309018 -0.809013 570.45609 REMARK 350 BIOMT3 18 0.309018 -0.809013 -0.500005 570.45645 REMARK 350 BIOMT1 19 -0.809021 0.499996 -0.309013 461.50877 REMARK 350 BIOMT2 19 0.499996 0.309023 -0.809017 285.22776 REMARK 350 BIOMT3 19 -0.309013 -0.809017 -0.500002 746.73640 REMARK 350 BIOMT1 20 0.309011 0.809019 -0.500000 108.94785 REMARK 350 BIOMT2 20 0.809019 -0.499995 -0.309019 285.22733 REMARK 350 BIOMT3 20 -0.500000 -0.309019 -0.809016 746.73694 REMARK 350 BIOMT1 21 0.000000 0.000000 1.000000 -0.00034 REMARK 350 BIOMT2 21 1.000000 0.000000 0.000000 0.00071 REMARK 350 BIOMT3 21 0.000000 1.000000 0.000000 -0.00037 REMARK 350 BIOMT1 22 -0.499998 0.309017 0.809018 108.94570 REMARK 350 BIOMT2 22 0.309017 -0.809018 0.499999 285.22944 REMARK 350 BIOMT3 22 0.809018 0.499999 0.309016 -176.28008 REMARK 350 BIOMT1 23 -0.309015 0.809016 0.500004 -0.00211 REMARK 350 BIOMT2 23 -0.809017 -0.500000 0.309017 570.45626 REMARK 350 BIOMT3 23 0.500001 -0.309021 0.809015 0.00162 REMARK 350 BIOMT1 24 0.309017 0.809015 0.500004 -176.28159 REMARK 350 BIOMT2 24 -0.809017 0.500001 -0.309015 461.50740 REMARK 350 BIOMT3 24 -0.500000 -0.309021 0.809016 285.22941 REMARK 350 BIOMT1 25 0.499999 0.309015 0.809018 -176.28050 REMARK 350 BIOMT2 25 0.309017 0.809018 -0.499998 108.94648 REMARK 350 BIOMT3 25 -0.809018 0.499999 0.309017 285.22818 REMARK 350 BIOMT1 26 0.000005 -0.000005 1.000000 -0.00043 REMARK 350 BIOMT2 26 -1.000000 0.000000 0.000005 570.45467 REMARK 350 BIOMT3 26 0.000000 -1.000000 -0.000005 570.45769 REMARK 350 BIOMT1 27 -0.500000 0.309011 0.809019 108.94776 REMARK 350 BIOMT2 27 -0.309019 0.809019 -0.499995 285.22646 REMARK 350 BIOMT3 27 -0.809016 -0.500000 -0.309019 746.73691 REMARK 350 BIOMT1 28 -0.309021 0.809015 0.500002 0.00053 REMARK 350 BIOMT2 28 0.809016 0.500004 -0.309015 -0.00088 REMARK 350 BIOMT3 28 -0.500000 0.309017 -0.809017 570.45570 REMARK 350 BIOMT1 29 0.309015 0.809018 0.499999 -176.28075 REMARK 350 BIOMT2 29 0.809018 -0.499998 0.309017 108.94714 REMARK 350 BIOMT3 29 0.499999 0.309017 -0.809018 285.22870 REMARK 350 BIOMT1 30 0.500004 0.309017 0.809015 -176.28134 REMARK 350 BIOMT2 30 -0.309015 -0.809017 0.500001 461.50806 REMARK 350 BIOMT3 30 0.809016 -0.500000 -0.309021 285.22993 REMARK 350 BIOMT1 31 0.000000 0.000005 -1.000000 570.45428 REMARK 350 BIOMT2 31 -1.000000 -0.000005 0.000000 570.45737 REMARK 350 BIOMT3 31 -0.000005 1.000000 0.000005 -0.00031 REMARK 350 BIOMT1 32 0.500001 -0.309015 -0.809017 461.50745 REMARK 350 BIOMT2 32 -0.309021 0.809016 -0.500000 285.22947 REMARK 350 BIOMT3 32 0.809015 0.500004 0.309017 -176.28087 REMARK 350 BIOMT1 33 0.309017 -0.809017 -0.500000 570.45604 REMARK 350 BIOMT2 33 0.809015 0.500001 -0.309021 0.00182 REMARK 350 BIOMT3 33 0.500004 -0.309015 0.809016 -0.00099 REMARK 350 BIOMT1 34 -0.309019 -0.809016 -0.500000 746.73681 REMARK 350 BIOMT2 34 0.809019 -0.500000 0.309011 108.94934 REMARK 350 BIOMT3 34 -0.499995 -0.309019 0.809019 285.22652 REMARK 350 BIOMT1 35 -0.500002 -0.309013 -0.809017 746.73571 REMARK 350 BIOMT2 35 -0.309013 -0.809021 0.499996 461.51026 REMARK 350 BIOMT3 35 -0.809017 0.499996 0.309023 285.22694 REMARK 350 BIOMT1 36 -0.000005 0.000000 -1.000000 570.45692 REMARK 350 BIOMT2 36 1.000000 0.000005 -0.000005 0.00073 REMARK 350 BIOMT3 36 0.000005 -1.000000 0.000000 570.45507 REMARK 350 BIOMT1 37 0.499996 -0.309013 -0.809021 461.50952 REMARK 350 BIOMT2 37 0.309023 -0.809017 0.499996 285.22811 REMARK 350 BIOMT3 37 -0.809017 -0.500002 -0.309013 746.73612 REMARK 350 BIOMT1 38 0.309019 -0.809013 -0.500005 570.45596 REMARK 350 BIOMT2 38 -0.809013 -0.500005 0.309018 570.45628 REMARK 350 BIOMT3 38 -0.500005 0.309018 -0.809013 570.45576 REMARK 350 BIOMT1 39 -0.309013 -0.809017 -0.500002 746.73596 REMARK 350 BIOMT2 39 -0.809021 0.499996 -0.309013 461.50961 REMARK 350 BIOMT3 39 0.499996 0.309023 -0.809017 285.22746 REMARK 350 BIOMT1 40 -0.500000 -0.309019 -0.809016 746.73656 REMARK 350 BIOMT2 40 0.309011 0.809019 -0.500000 108.94869 REMARK 350 BIOMT3 40 0.809019 -0.499995 -0.309019 285.22703 REMARK 350 BIOMT1 41 0.000000 1.000000 0.000000 -0.00071 REMARK 350 BIOMT2 41 0.000000 0.000000 1.000000 0.00037 REMARK 350 BIOMT3 41 1.000000 0.000000 0.000000 0.00034 REMARK 350 BIOMT1 42 0.809018 0.499999 0.309016 -176.28046 REMARK 350 BIOMT2 42 -0.499998 0.309017 0.809018 108.94639 REMARK 350 BIOMT3 42 0.309017 -0.809018 0.499999 285.22905 REMARK 350 BIOMT1 43 0.500001 -0.309021 0.809015 0.00122 REMARK 350 BIOMT2 43 -0.309015 0.809016 0.500004 -0.00137 REMARK 350 BIOMT3 43 -0.809017 -0.500000 0.309017 570.45589 REMARK 350 BIOMT1 44 -0.500000 -0.309021 0.809015 285.22905 REMARK 350 BIOMT2 44 0.309017 0.809015 0.500004 -176.28082 REMARK 350 BIOMT3 44 -0.809017 0.500001 -0.309015 461.50707 REMARK 350 BIOMT1 45 -0.809018 0.499998 0.309017 285.22786 REMARK 350 BIOMT2 45 0.499998 0.309016 0.809019 -176.27974 REMARK 350 BIOMT3 45 0.309017 0.809019 -0.499998 108.94615 REMARK 350 BIOMT1 46 0.000000 -1.000000 -0.000005 570.45729 REMARK 350 BIOMT2 46 0.000005 -0.000005 1.000000 0.00039 REMARK 350 BIOMT3 46 -1.000000 0.000000 0.000005 570.45436 REMARK 350 BIOMT1 47 -0.809016 -0.500000 -0.309019 746.73652 REMARK 350 BIOMT2 47 -0.500000 0.309011 0.809019 108.94860 REMARK 350 BIOMT3 47 -0.309019 0.809019 -0.499995 285.22617 REMARK 350 BIOMT1 48 -0.500000 0.309017 -0.809017 570.45536 REMARK 350 BIOMT2 48 -0.309021 0.809015 0.500001 0.00133 REMARK 350 BIOMT3 48 0.809015 0.500004 -0.309015 -0.00119 REMARK 350 BIOMT1 49 0.499999 0.309017 -0.809018 285.22837 REMARK 350 BIOMT2 49 0.309015 0.809018 0.499999 -176.27999 REMARK 350 BIOMT3 49 0.809018 -0.499998 0.309017 108.94680 REMARK 350 BIOMT1 50 0.809016 -0.500000 -0.309021 285.22957 REMARK 350 BIOMT2 50 0.500004 0.309017 0.809015 -176.28057 REMARK 350 BIOMT3 50 -0.309015 -0.809017 0.500001 461.50772 REMARK 350 BIOMT1 51 -0.000005 1.000000 0.000005 -0.00080 REMARK 350 BIOMT2 51 0.000000 0.000005 -1.000000 570.45501 REMARK 350 BIOMT3 51 -1.000000 -0.000005 0.000000 570.45698 REMARK 350 BIOMT1 52 0.809015 0.500004 0.309017 -176.28131 REMARK 350 BIOMT2 52 0.500002 -0.309015 -0.809017 461.50815 REMARK 350 BIOMT3 52 -0.309021 0.809016 -0.500000 285.22907 REMARK 350 BIOMT1 53 0.500004 -0.309015 0.809016 -0.00142 REMARK 350 BIOMT2 53 0.309017 -0.809017 -0.500000 570.45675 REMARK 350 BIOMT3 53 0.809015 0.500001 -0.309021 0.00143 REMARK 350 BIOMT1 54 -0.499995 -0.309019 0.809019 285.22605 REMARK 350 BIOMT2 54 -0.309019 -0.809016 -0.500000 746.73756 REMARK 350 BIOMT3 54 0.809019 -0.500000 0.309011 108.94897 REMARK 350 BIOMT1 55 -0.809017 0.499996 0.309023 285.22644 REMARK 350 BIOMT2 55 -0.500002 -0.309013 -0.809017 746.73648 REMARK 350 BIOMT3 55 -0.309013 -0.809021 0.499996 461.50989 REMARK 350 BIOMT1 56 0.000005 -1.000000 0.000000 570.45465 REMARK 350 BIOMT2 56 -0.000005 0.000000 -1.000000 570.45771 REMARK 350 BIOMT3 56 1.000000 0.000005 -0.000005 0.00040 REMARK 350 BIOMT1 57 -0.809017 -0.500002 -0.309013 746.73568 REMARK 350 BIOMT2 57 0.499996 -0.309013 -0.809021 461.51035 REMARK 350 BIOMT3 57 0.309023 -0.809017 0.499996 285.22781 REMARK 350 BIOMT1 58 -0.500005 0.309019 -0.809013 570.45527 REMARK 350 BIOMT2 58 0.309019 -0.809013 -0.500005 570.45678 REMARK 350 BIOMT3 58 -0.809013 -0.500005 0.309018 570.45595 REMARK 350 BIOMT1 59 0.499996 0.309023 -0.809017 285.22695 REMARK 350 BIOMT2 59 -0.309013 -0.809017 -0.500002 746.73673 REMARK 350 BIOMT3 59 -0.809021 0.499996 -0.309013 461.50924 REMARK 350 BIOMT1 60 0.809019 -0.499995 -0.309019 285.22657 REMARK 350 BIOMT2 60 -0.500000 -0.309019 -0.809016 746.73731 REMARK 350 BIOMT3 60 0.309011 0.809019 -0.500000 108.94832 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 7 REMARK 465 MET B 7 REMARK 465 MET C 7 REMARK 465 GLU C 277 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 249 -8.87 71.87 REMARK 500 GLU B 64 177.45 75.20 REMARK 500 ASP B 71 -164.44 -163.88 REMARK 500 SER B 203 142.24 -172.45 REMARK 500 MET B 249 -7.86 73.90 REMARK 500 SER C 200 -55.67 -124.29 REMARK 500 MET C 249 -8.36 72.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-74905 RELATED DB: EMDB REMARK 900 QUASIBACILLUS THERMOTOLERANS T=3 ENCAPSULIN PORE MUTANT VARIANT REMARK 900 LETTER11 DBREF1 9ZW4 A 7 198 UNP ENCAP_BACTR DBREF2 9ZW4 A A0A0F5HPP7 1 192 DBREF1 9ZW4 A 205 277 UNP ENCAP_BACTR DBREF2 9ZW4 A A0A0F5HPP7 210 282 DBREF1 9ZW4 B 7 198 UNP ENCAP_BACTR DBREF2 9ZW4 B A0A0F5HPP7 1 192 DBREF1 9ZW4 B 205 277 UNP ENCAP_BACTR DBREF2 9ZW4 B A0A0F5HPP7 210 282 DBREF1 9ZW4 C 7 198 UNP ENCAP_BACTR DBREF2 9ZW4 C A0A0F5HPP7 1 192 DBREF1 9ZW4 C 205 277 UNP ENCAP_BACTR DBREF2 9ZW4 C A0A0F5HPP7 210 282 SEQADV 9ZW4 GLY A 199 UNP A0A0F5HPP LINKER SEQADV 9ZW4 SER A 200 UNP A0A0F5HPP LINKER SEQADV 9ZW4 GLY A 201 UNP A0A0F5HPP LINKER SEQADV 9ZW4 GLY A 202 UNP A0A0F5HPP LINKER SEQADV 9ZW4 SER A 203 UNP A0A0F5HPP LINKER SEQADV 9ZW4 GLY A 204 UNP A0A0F5HPP LINKER SEQADV 9ZW4 GLY B 199 UNP A0A0F5HPP LINKER SEQADV 9ZW4 SER B 200 UNP A0A0F5HPP LINKER SEQADV 9ZW4 GLY B 201 UNP A0A0F5HPP LINKER SEQADV 9ZW4 GLY B 202 UNP A0A0F5HPP LINKER SEQADV 9ZW4 SER B 203 UNP A0A0F5HPP LINKER SEQADV 9ZW4 GLY B 204 UNP A0A0F5HPP LINKER SEQADV 9ZW4 GLY C 199 UNP A0A0F5HPP LINKER SEQADV 9ZW4 SER C 200 UNP A0A0F5HPP LINKER SEQADV 9ZW4 GLY C 201 UNP A0A0F5HPP LINKER SEQADV 9ZW4 GLY C 202 UNP A0A0F5HPP LINKER SEQADV 9ZW4 SER C 203 UNP A0A0F5HPP LINKER SEQADV 9ZW4 GLY C 204 UNP A0A0F5HPP LINKER SEQRES 1 A 271 MET ASN LYS SER GLN LEU TYR PRO ASP SER PRO LEU THR SEQRES 2 A 271 ASP GLN ASP PHE ASN GLN LEU ASP GLN THR VAL ILE GLU SEQRES 3 A 271 ALA ALA ARG ARG GLN LEU VAL GLY ARG ARG PHE ILE GLU SEQRES 4 A 271 LEU TYR GLY PRO LEU GLY ARG GLY MET GLN SER VAL PHE SEQRES 5 A 271 ASN ASP ILE PHE MET GLU SER HIS GLU ALA LYS MET ASP SEQRES 6 A 271 PHE GLN GLY SER PHE ASP THR GLU VAL GLU SER SER ARG SEQRES 7 A 271 ARG VAL ASN TYR THR ILE PRO MET LEU TYR LYS ASP PHE SEQRES 8 A 271 VAL LEU TYR TRP ARG ASP LEU GLU GLN SER LYS ALA LEU SEQRES 9 A 271 ASP ILE PRO ILE ASP PHE SER VAL ALA ALA ASN ALA ALA SEQRES 10 A 271 ARG ASP VAL ALA PHE LEU GLU ASP GLN MET ILE PHE HIS SEQRES 11 A 271 GLY SER LYS GLU PHE ASP ILE PRO GLY LEU MET ASN VAL SEQRES 12 A 271 LYS GLY ARG LEU THR HIS LEU ILE GLY ASN TRP TYR GLU SEQRES 13 A 271 SER GLY ASN ALA PHE GLN ASP ILE VAL GLU ALA ARG ASN SEQRES 14 A 271 LYS LEU LEU GLU MET ASN HIS ASN GLY PRO TYR ALA LEU SEQRES 15 A 271 VAL LEU SER PRO GLU LEU TYR SER LEU LEU GLY SER GLY SEQRES 16 A 271 GLY SER GLY LEU ILE THR ALA GLY VAL PHE GLN SER PRO SEQRES 17 A 271 VAL LEU LYS GLY LYS SER GLY VAL ILE VAL ASN THR GLY SEQRES 18 A 271 ARG ASN ASN LEU ASP LEU ALA ILE SER GLU ASP PHE GLU SEQRES 19 A 271 THR ALA TYR LEU GLY GLU GLU GLY MET ASN HIS PRO PHE SEQRES 20 A 271 ARG VAL TYR GLU THR VAL VAL LEU ARG ILE LYS ARG PRO SEQRES 21 A 271 ALA ALA ILE CYS THR LEU ILE ASP PRO GLU GLU SEQRES 1 B 271 MET ASN LYS SER GLN LEU TYR PRO ASP SER PRO LEU THR SEQRES 2 B 271 ASP GLN ASP PHE ASN GLN LEU ASP GLN THR VAL ILE GLU SEQRES 3 B 271 ALA ALA ARG ARG GLN LEU VAL GLY ARG ARG PHE ILE GLU SEQRES 4 B 271 LEU TYR GLY PRO LEU GLY ARG GLY MET GLN SER VAL PHE SEQRES 5 B 271 ASN ASP ILE PHE MET GLU SER HIS GLU ALA LYS MET ASP SEQRES 6 B 271 PHE GLN GLY SER PHE ASP THR GLU VAL GLU SER SER ARG SEQRES 7 B 271 ARG VAL ASN TYR THR ILE PRO MET LEU TYR LYS ASP PHE SEQRES 8 B 271 VAL LEU TYR TRP ARG ASP LEU GLU GLN SER LYS ALA LEU SEQRES 9 B 271 ASP ILE PRO ILE ASP PHE SER VAL ALA ALA ASN ALA ALA SEQRES 10 B 271 ARG ASP VAL ALA PHE LEU GLU ASP GLN MET ILE PHE HIS SEQRES 11 B 271 GLY SER LYS GLU PHE ASP ILE PRO GLY LEU MET ASN VAL SEQRES 12 B 271 LYS GLY ARG LEU THR HIS LEU ILE GLY ASN TRP TYR GLU SEQRES 13 B 271 SER GLY ASN ALA PHE GLN ASP ILE VAL GLU ALA ARG ASN SEQRES 14 B 271 LYS LEU LEU GLU MET ASN HIS ASN GLY PRO TYR ALA LEU SEQRES 15 B 271 VAL LEU SER PRO GLU LEU TYR SER LEU LEU GLY SER GLY SEQRES 16 B 271 GLY SER GLY LEU ILE THR ALA GLY VAL PHE GLN SER PRO SEQRES 17 B 271 VAL LEU LYS GLY LYS SER GLY VAL ILE VAL ASN THR GLY SEQRES 18 B 271 ARG ASN ASN LEU ASP LEU ALA ILE SER GLU ASP PHE GLU SEQRES 19 B 271 THR ALA TYR LEU GLY GLU GLU GLY MET ASN HIS PRO PHE SEQRES 20 B 271 ARG VAL TYR GLU THR VAL VAL LEU ARG ILE LYS ARG PRO SEQRES 21 B 271 ALA ALA ILE CYS THR LEU ILE ASP PRO GLU GLU SEQRES 1 C 271 MET ASN LYS SER GLN LEU TYR PRO ASP SER PRO LEU THR SEQRES 2 C 271 ASP GLN ASP PHE ASN GLN LEU ASP GLN THR VAL ILE GLU SEQRES 3 C 271 ALA ALA ARG ARG GLN LEU VAL GLY ARG ARG PHE ILE GLU SEQRES 4 C 271 LEU TYR GLY PRO LEU GLY ARG GLY MET GLN SER VAL PHE SEQRES 5 C 271 ASN ASP ILE PHE MET GLU SER HIS GLU ALA LYS MET ASP SEQRES 6 C 271 PHE GLN GLY SER PHE ASP THR GLU VAL GLU SER SER ARG SEQRES 7 C 271 ARG VAL ASN TYR THR ILE PRO MET LEU TYR LYS ASP PHE SEQRES 8 C 271 VAL LEU TYR TRP ARG ASP LEU GLU GLN SER LYS ALA LEU SEQRES 9 C 271 ASP ILE PRO ILE ASP PHE SER VAL ALA ALA ASN ALA ALA SEQRES 10 C 271 ARG ASP VAL ALA PHE LEU GLU ASP GLN MET ILE PHE HIS SEQRES 11 C 271 GLY SER LYS GLU PHE ASP ILE PRO GLY LEU MET ASN VAL SEQRES 12 C 271 LYS GLY ARG LEU THR HIS LEU ILE GLY ASN TRP TYR GLU SEQRES 13 C 271 SER GLY ASN ALA PHE GLN ASP ILE VAL GLU ALA ARG ASN SEQRES 14 C 271 LYS LEU LEU GLU MET ASN HIS ASN GLY PRO TYR ALA LEU SEQRES 15 C 271 VAL LEU SER PRO GLU LEU TYR SER LEU LEU GLY SER GLY SEQRES 16 C 271 GLY SER GLY LEU ILE THR ALA GLY VAL PHE GLN SER PRO SEQRES 17 C 271 VAL LEU LYS GLY LYS SER GLY VAL ILE VAL ASN THR GLY SEQRES 18 C 271 ARG ASN ASN LEU ASP LEU ALA ILE SER GLU ASP PHE GLU SEQRES 19 C 271 THR ALA TYR LEU GLY GLU GLU GLY MET ASN HIS PRO PHE SEQRES 20 C 271 ARG VAL TYR GLU THR VAL VAL LEU ARG ILE LYS ARG PRO SEQRES 21 C 271 ALA ALA ILE CYS THR LEU ILE ASP PRO GLU GLU HELIX 1 AA1 ASN A 8 TYR A 13 1 6 HELIX 2 AA2 THR A 19 ARG A 36 1 18 HELIX 3 AA3 VAL A 39 PHE A 43 5 5 HELIX 4 AA4 TYR A 100 ASP A 111 1 12 HELIX 5 AA5 PHE A 116 GLY A 137 1 22 HELIX 6 AA6 GLY A 164 MET A 180 1 17 HELIX 7 AA7 SER A 191 GLY A 199 1 9 HELIX 8 AA8 ARG A 265 ALA A 267 5 3 HELIX 9 AA9 LYS B 9 TYR B 13 1 5 HELIX 10 AB1 THR B 19 ARG B 36 1 18 HELIX 11 AB2 VAL B 39 PHE B 43 5 5 HELIX 12 AB3 TYR B 100 ASP B 111 1 12 HELIX 13 AB4 PHE B 116 GLY B 137 1 22 HELIX 14 AB5 GLY B 164 MET B 180 1 17 HELIX 15 AB6 SER B 191 GLY B 199 1 9 HELIX 16 AB7 ARG B 265 ALA B 267 5 3 HELIX 17 AB8 LYS C 9 TYR C 13 1 5 HELIX 18 AB9 THR C 19 LEU C 38 1 20 HELIX 19 AC1 VAL C 39 PHE C 43 5 5 HELIX 20 AC2 TYR C 100 ASP C 111 1 12 HELIX 21 AC3 PHE C 116 GLY C 137 1 22 HELIX 22 AC4 GLY C 164 MET C 180 1 17 HELIX 23 AC5 SER C 191 LEU C 198 1 8 HELIX 24 AC6 ARG C 265 ALA C 267 5 3 SHEET 1 AA1 4 LEU A 46 TYR A 47 0 SHEET 2 AA1 4 LEU A 231 TYR A 243 1 O LEU A 233 N TYR A 47 SHEET 3 AA1 4 HIS A 251 ILE A 263 -1 O TYR A 256 N GLU A 240 SHEET 4 AA1 4 MET A 92 LEU A 99 -1 N PHE A 97 O PHE A 253 SHEET 1 AA2 2 SER A 56 ILE A 61 0 SHEET 2 AA2 2 ARG A 84 THR A 89 -1 O TYR A 88 N VAL A 57 SHEET 1 AA3 5 LEU A 153 LEU A 156 0 SHEET 2 AA3 5 ILE A 269 ILE A 273 1 O ILE A 269 N LEU A 153 SHEET 3 AA3 5 SER A 220 ASN A 225 -1 N ILE A 223 O CYS A 270 SHEET 4 AA3 5 TYR A 186 LEU A 190 -1 N VAL A 189 O VAL A 222 SHEET 5 AA3 5 VAL A 210 GLN A 212 1 O PHE A 211 N LEU A 188 SHEET 1 AA4 4 LEU B 46 TYR B 47 0 SHEET 2 AA4 4 LEU B 231 TYR B 243 1 O LEU B 233 N TYR B 47 SHEET 3 AA4 4 HIS B 251 ILE B 263 -1 O TYR B 256 N GLU B 240 SHEET 4 AA4 4 MET B 92 LEU B 99 -1 N LYS B 95 O VAL B 255 SHEET 1 AA5 2 SER B 56 ILE B 61 0 SHEET 2 AA5 2 ARG B 84 THR B 89 -1 O TYR B 88 N VAL B 57 SHEET 1 AA6 5 LYS B 69 ASP B 71 0 SHEET 2 AA6 5 MET C 92 LEU C 99 -1 O MET C 92 N ASP B 71 SHEET 3 AA6 5 HIS C 251 ILE C 263 -1 O GLU C 257 N LEU C 93 SHEET 4 AA6 5 LEU C 231 TYR C 243 -1 N GLU C 240 O TYR C 256 SHEET 5 AA6 5 LEU C 46 TYR C 47 1 N TYR C 47 O LEU C 233 SHEET 1 AA7 5 LEU B 153 LEU B 156 0 SHEET 2 AA7 5 ILE B 269 ILE B 273 1 O ILE B 269 N LEU B 153 SHEET 3 AA7 5 SER B 220 ASN B 225 -1 N ILE B 223 O CYS B 270 SHEET 4 AA7 5 TYR B 186 LEU B 190 -1 N VAL B 189 O VAL B 222 SHEET 5 AA7 5 GLY B 209 GLN B 212 1 O PHE B 211 N LEU B 188 SHEET 1 AA8 2 SER C 56 PHE C 62 0 SHEET 2 AA8 2 SER C 83 THR C 89 -1 O VAL C 86 N ASN C 59 SHEET 1 AA9 5 LEU C 153 LEU C 156 0 SHEET 2 AA9 5 ILE C 269 ILE C 273 1 O ILE C 269 N LEU C 153 SHEET 3 AA9 5 SER C 220 ASN C 225 -1 N ILE C 223 O CYS C 270 SHEET 4 AA9 5 TYR C 186 LEU C 190 -1 N ALA C 187 O VAL C 224 SHEET 5 AA9 5 VAL C 210 GLN C 212 1 O PHE C 211 N LEU C 188 CISPEP 1 GLY A 48 PRO A 49 0 3.00 CISPEP 2 GLY A 184 PRO A 185 0 0.83 CISPEP 3 GLY B 48 PRO B 49 0 2.33 CISPEP 4 GLY B 184 PRO B 185 0 3.26 CISPEP 5 GLY C 48 PRO C 49 0 1.07 CISPEP 6 GLY C 184 PRO C 185 0 4.63 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MASTER 332 0 0 24 34 0 0 6 6413 3 0 63 END