data_A1A1L
# 
_chem_comp.id                                    A1A1L 
_chem_comp.name                                  "(4S,5aS,8S,8aR)-N-[(1R,4R,6Z,8R,9R,10R,11R,12S,13R)-4-fluoro-11,12,13-trihydroxy-8-methyl-14-oxa-2-thiabicyclo[8.3.1]tetradec-6-en-9-yl]-4-(2-methylpropyl)octahydro-2H-oxepino[2,3-c]pyrrole-8-carboxamide (non-preferred name)" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C26 H43 F N2 O6 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2024-08-08 
_chem_comp.pdbx_modified_date                    2024-11-15 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        530.693 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1A1L 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        9D0J 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1A1L C02 C1  C 0 1 N N R N N N 185.835 -105.078 -139.370 5.311   1.512  0.460  C02 A1A1L 1  
A1A1L C07 C2  C 0 1 N N R N N N 183.490 -104.983 -141.008 2.645   0.605  -0.167 C07 A1A1L 2  
A1A1L C09 C3  C 0 1 N N R N N N 185.873 -105.141 -140.918 5.004   0.188  -0.241 C09 A1A1L 3  
A1A1L C12 C4  C 0 1 N N R N N N 185.812 -106.720 -144.432 3.489   -3.385 0.236  C12 A1A1L 4  
A1A1L C14 C5  C 0 1 N N N N N N 184.748 -105.599 -144.482 2.487   -3.052 -0.872 C14 A1A1L 5  
A1A1L C15 C6  C 0 1 N N N N N N 183.377 -106.269 -144.386 1.156   -2.705 -0.256 C15 A1A1L 6  
A1A1L C19 C7  C 0 1 N N R N N N 182.313 -104.212 -141.687 1.396   0.669  -1.048 C19 A1A1L 7  
A1A1L C21 C8  C 0 1 N N N N N N 179.748 -104.224 -141.125 -0.813  1.670  -0.814 C21 A1A1L 8  
A1A1L C22 C9  C 0 1 N N S N N N 178.513 -105.122 -140.900 -1.997  2.081  0.023  C22 A1A1L 9  
A1A1L C23 C10 C 0 1 N N R N N N 178.184 -105.799 -142.027 -2.922  0.873  0.259  C23 A1A1L 10 
A1A1L C26 C11 C 0 1 N N N N N N 177.824 -107.147 -144.505 -4.205  -1.428 0.912  C26 A1A1L 11 
A1A1L C28 C12 C 0 1 N N N N N N 175.498 -107.111 -145.528 -6.645  -1.206 1.327  C28 A1A1L 12 
A1A1L C03 C13 C 0 1 N N S N N N 184.551 -105.683 -138.899 4.136   1.902  1.359  C03 A1A1L 13 
A1A1L C05 C14 C 0 1 N N R N N N 183.386 -104.986 -139.457 2.851   1.952  0.529  C05 A1A1L 14 
A1A1L C11 C15 C 0 1 N N N N N N 186.701 -106.795 -143.132 4.798   -2.635 -0.017 C11 A1A1L 15 
A1A1L C16 C16 C 0 1 N N N N N N 182.346 -105.618 -143.757 0.528   -1.616 -0.622 C16 A1A1L 16 
A1A1L C17 C17 C 0 1 N N R N N N 182.577 -104.214 -143.167 1.135   -0.709 -1.661 C17 A1A1L 17 
A1A1L C18 C18 C 0 1 N N N N N N 181.563 -103.227 -143.828 0.169   -0.567 -2.840 C18 A1A1L 18 
A1A1L C25 C19 C 0 1 N N N N N N 179.072 -106.253 -144.319 -3.227  -1.465 -0.228 C25 A1A1L 19 
A1A1L C27 C20 C 0 1 N N S N N N 176.554 -106.302 -144.713 -5.482  -0.721 0.459  C27 A1A1L 20 
A1A1L C29 C21 C 0 1 N N N N N N 175.718 -107.077 -147.090 -7.956  -0.625 0.794  C29 A1A1L 21 
A1A1L C30 C22 C 0 1 N N N N N N 174.463 -107.578 -147.875 -8.236  -1.193 -0.599 C30 A1A1L 22 
A1A1L C31 C23 C 0 1 N N N N N N 176.116 -105.641 -147.561 -9.101  -1.001 1.737  C31 A1A1L 23 
A1A1L C32 C24 C 0 1 N N N N N N 175.962 -105.886 -143.371 -5.405  0.756  0.551  C32 A1A1L 24 
A1A1L C33 C25 C 0 1 N N S N N N 176.911 -105.076 -142.498 -4.248  1.237  -0.340 C33 A1A1L 25 
A1A1L C34 C26 C 0 1 N N N N N N 176.232 -104.776 -141.114 -4.228  2.786  -0.370 C34 A1A1L 26 
A1A1L F13 F1  F 0 1 N N N N N N 186.738 -106.592 -145.442 3.734   -4.762 0.244  F13 A1A1L 27 
A1A1L N20 N1  N 0 1 N N N N N N 181.065 -104.935 -141.439 0.245   1.068  -0.235 N20 A1A1L 28 
A1A1L N35 N2  N 0 1 N N N N N N 177.228 -104.228 -140.465 -2.808  3.089  -0.702 N35 A1A1L 29 
A1A1L O01 O1  O 0 1 N N N N N N 186.976 -105.790 -138.882 6.489   1.367  1.255  O01 A1A1L 30 
A1A1L O04 O2  O 0 1 N N N N N N 184.451 -105.730 -137.436 4.382   3.188  1.932  O04 A1A1L 31 
A1A1L O06 O3  O 0 1 N N N N N N 183.287 -103.664 -138.952 2.957   2.985  -0.453 O06 A1A1L 32 
A1A1L O08 O4  O 0 1 N N N N N N 184.752 -104.396 -141.483 3.785   0.308  -0.976 O08 A1A1L 33 
A1A1L O24 O5  O 0 1 N N N N N N 179.337 -105.776 -143.020 -2.308  -0.337 -0.148 O24 A1A1L 34 
A1A1L O36 O6  O 0 1 N N N N N N 179.690 -103.049 -141.060 -0.811  1.882  -2.008 O36 A1A1L 35 
A1A1L S10 S1  S 0 1 N N N N N N 185.727 -106.800 -141.562 4.838   -1.130 0.994  S10 A1A1L 36 
A1A1L H1  H1  H 0 1 N N N N N N 185.879 -104.024 -139.058 5.470   2.289  -0.287 H1  A1A1L 37 
A1A1L H2  H2  H 0 1 N N N N N N 183.439 -106.028 -141.347 2.520   -0.176 0.584  H2  A1A1L 38 
A1A1L H3  H3  H 0 1 N N N N N N 186.831 -104.740 -141.280 5.817   -0.056 -0.926 H3  A1A1L 39 
A1A1L H4  H4  H 0 1 N N N N N N 185.287 -107.682 -144.525 3.078   -3.084 1.200  H4  A1A1L 40 
A1A1L H5  H5  H 0 1 N N N N N N 184.889 -104.908 -143.638 2.853   -2.203 -1.449 H5  A1A1L 41 
A1A1L H6  H6  H 0 1 N N N N N N 184.830 -105.044 -145.428 2.371   -3.914 -1.528 H6  A1A1L 42 
A1A1L H7  H7  H 0 1 N N N N N N 183.221 -107.249 -144.811 0.721   -3.357 0.487  H7  A1A1L 43 
A1A1L H8  H8  H 0 1 N N N N N N 182.265 -103.183 -141.300 1.549   1.398  -1.844 H8  A1A1L 44 
A1A1L H9  H9  H 0 1 N N N N N N 178.731 -105.813 -140.072 -1.659  2.487  0.976  H9  A1A1L 45 
A1A1L H10 H10 H 0 1 N N N N N N 177.930 -106.846 -141.803 -3.072  0.806  1.337  H10 A1A1L 46 
A1A1L H11 H11 H 0 1 N N N N N N 177.695 -107.772 -143.609 -4.444  -2.446 1.218  H11 A1A1L 47 
A1A1L H12 H12 H 0 1 N N N N N N 177.973 -107.791 -145.384 -3.764  -0.891 1.751  H12 A1A1L 48 
A1A1L H13 H13 H 0 1 N N N N N N 174.503 -106.695 -145.311 -6.691  -2.295 1.297  H13 A1A1L 49 
A1A1L H14 H14 H 0 1 N N N N N N 175.537 -108.159 -145.197 -6.493  -0.877 2.355  H14 A1A1L 50 
A1A1L H15 H15 H 0 1 N N N N N N 184.525 -106.719 -139.267 4.026   1.165  2.154  H15 A1A1L 51 
A1A1L H16 H16 H 0 1 N N N N N N 182.479 -105.547 -139.187 2.003   2.157  1.183  H16 A1A1L 52 
A1A1L H17 H17 H 0 1 N N N N N N 187.298 -107.718 -143.173 5.640   -3.274 0.249  H17 A1A1L 53 
A1A1L H18 H18 H 0 1 N N N N N N 187.373 -105.924 -143.121 4.865   -2.366 -1.071 H18 A1A1L 54 
A1A1L H19 H19 H 0 1 N N N N N N 181.377 -106.088 -143.676 -0.424  -1.367 -0.177 H19 A1A1L 55 
A1A1L H20 H20 H 0 1 N N N N N N 183.605 -103.883 -143.375 2.075   -1.135 -2.011 H20 A1A1L 56 
A1A1L H21 H21 H 0 1 N N N N N N 181.713 -102.217 -143.418 -0.771  -0.141 -2.490 H21 A1A1L 57 
A1A1L H22 H22 H 0 1 N N N N N N 181.725 -103.209 -144.916 0.608   0.089  -3.592 H22 A1A1L 58 
A1A1L H23 H23 H 0 1 N N N N N N 180.536 -103.560 -143.616 -0.016  -1.548 -3.277 H23 A1A1L 59 
A1A1L H24 H24 H 0 1 N N N N N N 179.947 -106.836 -144.642 -2.660  -2.395 -0.185 H24 A1A1L 60 
A1A1L H25 H25 H 0 1 N N N N N N 178.952 -105.378 -144.974 -3.770  -1.421 -1.171 H25 A1A1L 61 
A1A1L H26 H26 H 0 1 N N N N N N 176.819 -105.399 -145.283 -5.683  -0.993 -0.577 H26 A1A1L 62 
A1A1L H27 H27 H 0 1 N N N N N N 176.554 -107.752 -147.324 -7.875  0.460  0.734  H27 A1A1L 63 
A1A1L H28 H28 H 0 1 N N N N N N 174.195 -108.589 -147.533 -9.215  -0.856 -0.939 H28 A1A1L 64 
A1A1L H29 H29 H 0 1 N N N N N N 173.620 -106.895 -147.694 -7.471  -0.845 -1.294 H29 A1A1L 65 
A1A1L H30 H30 H 0 1 N N N N N N 174.690 -107.603 -148.951 -8.220  -2.282 -0.558 H30 A1A1L 66 
A1A1L H31 H31 H 0 1 N N N N N N 177.000 -105.302 -147.000 -8.901  -0.596 2.729  H31 A1A1L 67 
A1A1L H32 H32 H 0 1 N N N N N N 176.349 -105.659 -148.636 -10.035 -0.587 1.357  H32 A1A1L 68 
A1A1L H33 H33 H 0 1 N N N N N N 175.279 -104.950 -147.379 -9.182  -2.086 1.796  H33 A1A1L 69 
A1A1L H34 H34 H 0 1 N N N N N N 175.065 -105.279 -143.562 -6.342  1.194  0.209  H34 A1A1L 70 
A1A1L H35 H35 H 0 1 N N N N N N 175.678 -106.796 -142.821 -5.216  1.050  1.584  H35 A1A1L 71 
A1A1L H36 H36 H 0 1 N N N N N N 177.174 -104.130 -142.995 -4.341  0.822  -1.343 H36 A1A1L 72 
A1A1L H37 H37 H 0 1 N N N N N N 175.387 -104.080 -141.220 -4.895  3.166  -1.144 H37 A1A1L 73 
A1A1L H38 H38 H 0 1 N N N N N N 175.888 -105.699 -140.624 -4.492  3.196  0.605  H38 A1A1L 74 
A1A1L H39 H39 H 0 1 N N N N N N 181.074 -105.934 -141.476 0.243   0.898  0.720  H39 A1A1L 75 
A1A1L H40 H40 H 0 1 N N N N N N 177.349 -103.274 -140.738 -2.650  3.033  -1.697 H40 A1A1L 76 
A1A1L H42 H42 H 0 1 N N N N N N 186.981 -105.769 -137.932 7.276   1.120  0.750  H42 A1A1L 77 
A1A1L H43 H43 H 0 1 N N N N N N 185.207 -106.182 -137.081 5.182   3.230  2.474  H43 A1A1L 78 
A1A1L H44 H44 H 0 1 N N N N N N 183.225 -103.690 -138.004 3.089   3.868  -0.082 H44 A1A1L 79 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1A1L C30 C29 SING N N 1  
A1A1L C31 C29 SING N N 2  
A1A1L C29 C28 SING N N 3  
A1A1L C28 C27 SING N N 4  
A1A1L F13 C12 SING N N 5  
A1A1L C27 C26 SING N N 6  
A1A1L C27 C32 SING N N 7  
A1A1L C26 C25 SING N N 8  
A1A1L C14 C12 SING N N 9  
A1A1L C14 C15 SING N N 10 
A1A1L C12 C11 SING N N 11 
A1A1L C15 C16 DOUB N Z 12 
A1A1L C25 O24 SING N N 13 
A1A1L C18 C17 SING N N 14 
A1A1L C16 C17 SING N N 15 
A1A1L C32 C33 SING N N 16 
A1A1L C17 C19 SING N N 17 
A1A1L C11 S10 SING N N 18 
A1A1L O24 C23 SING N N 19 
A1A1L C33 C23 SING N N 20 
A1A1L C33 C34 SING N N 21 
A1A1L C23 C22 SING N N 22 
A1A1L C19 N20 SING N N 23 
A1A1L C19 C07 SING N N 24 
A1A1L S10 C09 SING N N 25 
A1A1L O08 C07 SING N N 26 
A1A1L O08 C09 SING N N 27 
A1A1L N20 C21 SING N N 28 
A1A1L C21 O36 DOUB N N 29 
A1A1L C21 C22 SING N N 30 
A1A1L C34 N35 SING N N 31 
A1A1L C07 C05 SING N N 32 
A1A1L C09 C02 SING N N 33 
A1A1L C22 N35 SING N N 34 
A1A1L C05 O06 SING N N 35 
A1A1L C05 C03 SING N N 36 
A1A1L C02 C03 SING N N 37 
A1A1L C02 O01 SING N N 38 
A1A1L C03 O04 SING N N 39 
A1A1L C02 H1  SING N N 40 
A1A1L C07 H2  SING N N 41 
A1A1L C09 H3  SING N N 42 
A1A1L C12 H4  SING N N 43 
A1A1L C14 H5  SING N N 44 
A1A1L C14 H6  SING N N 45 
A1A1L C15 H7  SING N N 46 
A1A1L C19 H8  SING N N 47 
A1A1L C22 H9  SING N N 48 
A1A1L C23 H10 SING N N 49 
A1A1L C26 H11 SING N N 50 
A1A1L C26 H12 SING N N 51 
A1A1L C28 H13 SING N N 52 
A1A1L C28 H14 SING N N 53 
A1A1L C03 H15 SING N N 54 
A1A1L C05 H16 SING N N 55 
A1A1L C11 H17 SING N N 56 
A1A1L C11 H18 SING N N 57 
A1A1L C16 H19 SING N N 58 
A1A1L C17 H20 SING N N 59 
A1A1L C18 H21 SING N N 60 
A1A1L C18 H22 SING N N 61 
A1A1L C18 H23 SING N N 62 
A1A1L C25 H24 SING N N 63 
A1A1L C25 H25 SING N N 64 
A1A1L C27 H26 SING N N 65 
A1A1L C29 H27 SING N N 66 
A1A1L C30 H28 SING N N 67 
A1A1L C30 H29 SING N N 68 
A1A1L C30 H30 SING N N 69 
A1A1L C31 H31 SING N N 70 
A1A1L C31 H32 SING N N 71 
A1A1L C31 H33 SING N N 72 
A1A1L C32 H34 SING N N 73 
A1A1L C32 H35 SING N N 74 
A1A1L C33 H36 SING N N 75 
A1A1L C34 H37 SING N N 76 
A1A1L C34 H38 SING N N 77 
A1A1L N20 H39 SING N N 78 
A1A1L N35 H40 SING N N 79 
A1A1L O01 H42 SING N N 80 
A1A1L O04 H43 SING N N 81 
A1A1L O06 H44 SING N N 82 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1A1L SMILES           ACDLabs              12.01 "CC(C)CC1CC2CNC(C2OCC1)C(=O)NC1C2OC(SCC(F)CC=CC1C)C(O)C(O)C2O"                                                                                                                                                                                      
A1A1L InChI            InChI                1.06  "InChI=1S/C26H43FN2O6S/c1-13(2)9-15-7-8-34-23-16(10-15)11-28-19(23)25(33)29-18-14(3)5-4-6-17(27)12-36-26-22(32)20(30)21(31)24(18)35-26/h4-5,13-24,26,28,30-32H,6-12H2,1-3H3,(H,29,33)/b5-4-/t14-,15+,16+,17-,18-,19+,20+,21-,22-,23-,24-,26-/m1/s1" 
A1A1L InChIKey         InChI                1.06  GLEYKIFUQKWPHN-JPYIKDSJSA-N                                                                                                                                                                                                                         
A1A1L SMILES_CANONICAL CACTVS               3.385 "CC(C)C[C@@H]1CCO[C@@H]2[C@H](CN[C@@H]2C(=O)N[C@@H]3[C@H](C)\C=C/C[C@@H](F)CS[C@H]4O[C@H]3[C@H](O)[C@H](O)[C@H]4O)C1"                                                                                                                               
A1A1L SMILES           CACTVS               3.385 "CC(C)C[CH]1CCO[CH]2[CH](CN[CH]2C(=O)N[CH]3[CH](C)C=CC[CH](F)CS[CH]4O[CH]3[CH](O)[CH](O)[CH]4O)C1"                                                                                                                                                  
A1A1L SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H]1/C=C\C[C@H](CS[C@@H]2[C@@H]([C@H]([C@H]([C@@H]([C@@H]1NC(=O)[C@@H]3[C@H]4[C@@H](C[C@@H](CCO4)CC(C)C)CN3)O2)O)O)O)F"                                                                                                                        
A1A1L SMILES           "OpenEye OEToolkits" 2.0.7 "CC1C=CCC(CSC2C(C(C(C(C1NC(=O)C3C4C(CC(CCO4)CC(C)C)CN3)O2)O)O)O)F"                                                                                                                                                                                  
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
A1A1L "SYSTEMATIC NAME" ACDLabs              12.01 "(4S,5aS,8S,8aR)-N-[(1R,4R,6Z,8R,9R,10R,11R,12S,13R)-4-fluoro-11,12,13-trihydroxy-8-methyl-14-oxa-2-thiabicyclo[8.3.1]tetradec-6-en-9-yl]-4-(2-methylpropyl)octahydro-2H-oxepino[2,3-c]pyrrole-8-carboxamide (non-preferred name)"                                                               
A1A1L "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(4~{S},5~{a}~{S},8~{S},8~{a}~{R})-~{N}-[(1~{R},4~{R},6~{Z},8~{R},9~{R},10~{R},11~{R},12~{S},13~{R})-4-fluoranyl-8-methyl-11,12,13-tris(oxidanyl)-14-oxa-2-thiabicyclo[8.3.1]tetradec-6-en-9-yl]-4-(2-methylpropyl)-3,4,5,5~{a},6,7,8,8~{a}-octahydro-2~{H}-oxepino[2,3-c]pyrrole-8-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1A1L "Create component" 2024-08-08 RCSB 
A1A1L "Initial release"  2024-11-20 RCSB 
# 
