data_A1H5X
# 
_chem_comp.id                                    A1H5X 
_chem_comp.name                                  "(2~{R},3~{S},4~{R},5~{S},6~{S})-6-[(2~{S})-3-azanyl-2-oxidanyl-propoxy]-2-(hydroxymethyl)-5-(4-phenyl-1,2,3-triazol-1-yl)oxane-3,4-diol" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C17 H24 N4 O6" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2024-03-11 
_chem_comp.pdbx_modified_date                    2024-11-08 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        380.396 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1H5X 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        9EMS 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1H5X C2   C1  C 0 1 N N N N N N -1.231 -22.668 2.984  -0.614 1.478  2.367  C2   A1H5X 1  
A1H5X C3   C2  C 0 1 N N R N N N -2.648 -22.647 2.448  -1.075 0.352  1.439  C3   A1H5X 2  
A1H5X C4   C3  C 0 1 N N S N N N -3.307 -21.265 2.490  -0.346 -0.943 1.806  C4   A1H5X 3  
A1H5X C6   C4  C 0 1 N N R N N N -4.803 -21.364 2.233  -0.766 -2.050 0.835  C6   A1H5X 4  
A1H5X C8   C5  C 0 1 N N S N N N -5.460 -22.403 3.141  -0.464 -1.599 -0.597 C8   A1H5X 5  
A1H5X O1   O1  O 0 1 N N N N N N -0.368 -23.483 2.192  -1.378 2.656  2.101  O1   A1H5X 6  
A1H5X C12  C6  C 0 1 Y N N N N N -5.185 -21.421 6.602  2.972  -0.547 -0.745 C12  A1H5X 7  
A1H5X C13  C7  C 0 1 Y N N N N N -4.634 -21.168 7.944  4.126  0.373  -0.582 C13  A1H5X 8  
A1H5X C14  C8  C 0 1 Y N N N N N -3.711 -22.051 8.506  5.407  -0.043 -0.937 C14  A1H5X 9  
A1H5X C15  C9  C 0 1 Y N N N N N -3.198 -21.821 9.771  6.476  0.816  -0.783 C15  A1H5X 10 
A1H5X C16  C10 C 0 1 Y N N N N N -3.599 -20.711 10.488 6.277  2.088  -0.276 C16  A1H5X 11 
A1H5X C17  C11 C 0 1 Y N N N N N -4.513 -19.833 9.944  5.007  2.505  0.079  C17  A1H5X 12 
A1H5X C18  C12 C 0 1 Y N N N N N -5.033 -20.057 8.681  3.930  1.656  -0.077 C18  A1H5X 13 
A1H5X C19  C13 C 0 1 Y N N N N N -4.581 -21.922 5.479  1.667  -0.286 -0.444 C19  A1H5X 14 
A1H5X C20  C14 C 0 1 N N S N N N -4.746 -23.740 2.971  -1.189 -0.279 -0.872 C20  A1H5X 15 
A1H5X C22  C15 C 0 1 N N N N N N -4.323 -25.506 1.378  -3.379 0.628  -1.226 C22  A1H5X 16 
A1H5X C23  C16 C 0 1 N N S N N N -4.399 -25.741 -0.117 -4.866 0.304  -1.070 C23  A1H5X 17 
A1H5X C25  C17 C 0 1 N N N N N N -3.294 -24.986 -0.842 -5.701 1.436  -1.672 C25  A1H5X 18 
A1H5X N10  N1  N 0 1 Y N N N N N -6.714 -21.501 5.043  1.807  -2.279 -1.215 N10  A1H5X 19 
A1H5X N11  N2  N 0 1 Y N N N N N -6.495 -21.177 6.298  3.002  -1.803 -1.226 N11  A1H5X 20 
A1H5X N26  N3  N 0 1 N N N N N N -3.039 -25.610 -2.164 -7.128 1.126  -1.523 N26  A1H5X 21 
A1H5X N9   N4  N 0 1 Y N N N N N -5.545 -21.955 4.539  0.979  -1.408 -0.756 N9   A1H5X 22 
A1H5X O21  O2  O 0 1 N N N N N N -4.972 -24.269 1.697  -2.600 -0.479 -0.769 O21  A1H5X 23 
A1H5X O24  O3  O 0 1 N N N N N N -5.665 -25.300 -0.622 -5.181 0.167  0.317  O24  A1H5X 24 
A1H5X O27  O4  O 0 1 N N N N N N -3.364 -23.601 3.248  -0.775 0.698  0.085  O27  A1H5X 25 
A1H5X O5   O5  O 0 1 N N N N N N -2.734 -20.428 1.489  -0.688 -1.321 3.141  O5   A1H5X 26 
A1H5X O7   O6  O 0 1 N N N N N N -5.442 -20.107 2.428  -0.036 -3.243 1.125  O7   A1H5X 27 
A1H5X H2B  H1  H 0 1 N N N N N N -1.246 -23.062 4.011  -0.761 1.176  3.404  H2B  A1H5X 28 
A1H5X H2A  H2  H 0 1 N N N N N N -0.840 -21.640 2.991  0.442  1.683  2.194  H2A  A1H5X 29 
A1H5X H3   H3  H 0 1 N N N N N N -2.629 -22.987 1.402  -2.150 0.208  1.548  H3   A1H5X 30 
A1H5X H4   H4  H 0 1 N N N N N N -3.146 -20.828 3.487  0.731  -0.787 1.737  H4   A1H5X 31 
A1H5X H6   H5  H 0 1 N N N N N N -4.948 -21.686 1.191  -1.834 -2.241 0.941  H6   A1H5X 32 
A1H5X H8   H6  H 0 1 N N N N N N -6.488 -22.541 2.775  -0.810 -2.359 -1.299 H8   A1H5X 33 
A1H5X H1   H7  H 0 1 N N N N N N 0.508  -23.469 2.560  -1.139 3.413  2.655  H1   A1H5X 34 
A1H5X H14  H8  H 0 1 N N N N N N -3.394 -22.921 7.950  5.563  -1.036 -1.333 H14  A1H5X 35 
A1H5X H15  H9  H 0 1 N N N N N N -2.484 -22.510 10.197 7.470  0.495  -1.058 H15  A1H5X 36 
A1H5X H16  H10 H 0 1 N N N N N N -3.197 -20.531 11.474 7.117  2.757  -0.157 H16  A1H5X 37 
A1H5X H17  H11 H 0 1 N N N N N N -4.825 -18.966 10.507 4.858  3.499  0.474  H17  A1H5X 38 
A1H5X H18  H12 H 0 1 N N N N N N -5.752 -19.366 8.265  2.938  1.985  0.196  H18  A1H5X 39 
A1H5X H19  H13 H 0 1 N N N N N N -3.550 -22.226 5.370  1.264  0.630  -0.038 H19  A1H5X 40 
A1H5X H20  H14 H 0 1 N N N N N N -5.177 -24.427 3.714  -0.943 0.068  -1.876 H20  A1H5X 41 
A1H5X H22B H15 H 0 0 N N N N N N -4.825 -26.331 1.905  -3.157 0.820  -2.276 H22B A1H5X 42 
A1H5X H22A H16 H 0 0 N N N N N N -3.269 -25.459 1.689  -3.136 1.512  -0.635 H22A A1H5X 43 
A1H5X H23  H17 H 0 1 N N N N N N -4.275 -26.817 -0.311 -5.091 -0.628 -1.587 H23  A1H5X 44 
A1H5X H25A H18 H 0 0 N N N N N N -2.374 -25.019 -0.240 -5.476 2.369  -1.155 H25A A1H5X 45 
A1H5X H25B H19 H 0 0 N N N N N N -3.601 -23.940 -0.986 -5.461 1.541  -2.730 H25B A1H5X 46 
A1H5X H26A H20 H 0 0 N N N N N N -2.312 -25.110 -2.635 -7.363 0.960  -0.555 H26A A1H5X 47 
A1H5X H26B H21 H 0 0 N N N N N N -2.759 -26.561 -2.035 -7.701 1.859  -1.913 H26B A1H5X 48 
A1H5X H24  H23 H 0 1 N N N N N N -6.363 -25.765 -0.176 -5.005 0.961  0.841  H24  A1H5X 49 
A1H5X H5   H24 H 0 1 N N N N N N -1.798 -20.355 1.634  -0.454 -0.663 3.809  H5   A1H5X 50 
A1H5X H7   H25 H 0 1 N N N N N N -6.373 -20.195 2.262  -0.175 -3.582 2.020  H7   A1H5X 51 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1H5X N26 C25  SING N N 1  
A1H5X C25 C23  SING N N 2  
A1H5X O24 C23  SING N N 3  
A1H5X C23 C22  SING N N 4  
A1H5X C22 O21  SING N N 5  
A1H5X O5  C4   SING N N 6  
A1H5X O21 C20  SING N N 7  
A1H5X O1  C2   SING N N 8  
A1H5X C6  O7   SING N N 9  
A1H5X C6  C4   SING N N 10 
A1H5X C6  C8   SING N N 11 
A1H5X C3  C4   SING N N 12 
A1H5X C3  C2   SING N N 13 
A1H5X C3  O27  SING N N 14 
A1H5X C20 C8   SING N N 15 
A1H5X C20 O27  SING N N 16 
A1H5X C8  N9   SING N N 17 
A1H5X N9  N10  SING Y N 18 
A1H5X N9  C19  SING Y N 19 
A1H5X N10 N11  DOUB Y N 20 
A1H5X C19 C12  DOUB Y N 21 
A1H5X N11 C12  SING Y N 22 
A1H5X C12 C13  SING N N 23 
A1H5X C13 C14  DOUB Y N 24 
A1H5X C13 C18  SING Y N 25 
A1H5X C14 C15  SING Y N 26 
A1H5X C18 C17  DOUB Y N 27 
A1H5X C15 C16  DOUB Y N 28 
A1H5X C17 C16  SING Y N 29 
A1H5X C2  H2B  SING N N 30 
A1H5X C2  H2A  SING N N 31 
A1H5X C3  H3   SING N N 32 
A1H5X C4  H4   SING N N 33 
A1H5X C6  H6   SING N N 34 
A1H5X C8  H8   SING N N 35 
A1H5X O1  H1   SING N N 36 
A1H5X C14 H14  SING N N 37 
A1H5X C15 H15  SING N N 38 
A1H5X C16 H16  SING N N 39 
A1H5X C17 H17  SING N N 40 
A1H5X C18 H18  SING N N 41 
A1H5X C19 H19  SING N N 42 
A1H5X C20 H20  SING N N 43 
A1H5X C22 H22B SING N N 44 
A1H5X C22 H22A SING N N 45 
A1H5X C23 H23  SING N N 46 
A1H5X C25 H25A SING N N 47 
A1H5X C25 H25B SING N N 48 
A1H5X N26 H26A SING N N 49 
A1H5X N26 H26B SING N N 50 
A1H5X O24 H24  SING N N 51 
A1H5X O5  H5   SING N N 52 
A1H5X O7  H7   SING N N 53 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1H5X InChI            InChI                1.06  "InChI=1S/C17H24N4O6/c18-6-11(23)9-26-17-14(16(25)15(24)13(8-22)27-17)21-7-12(19-20-21)10-4-2-1-3-5-10/h1-5,7,11,13-17,22-25H,6,8-9,18H2/t11-,13+,14-,15+,16+,17-/m0/s1" 
A1H5X InChIKey         InChI                1.06  KSCFACOHPRFOGC-RLKGDUNQSA-N                                                                                                                                              
A1H5X SMILES_CANONICAL CACTVS               3.385 "NC[C@H](O)CO[C@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@@H]1n2cc(nn2)c3ccccc3"                                                                                                  
A1H5X SMILES           CACTVS               3.385 "NC[CH](O)CO[CH]1O[CH](CO)[CH](O)[CH](O)[CH]1n2cc(nn2)c3ccccc3"                                                                                                          
A1H5X SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)c2cn(nn2)[C@H]3[C@H]([C@@H]([C@H](O[C@@H]3OC[C@H](CN)O)CO)O)O"                                                                                                
A1H5X SMILES           "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)c2cn(nn2)C3C(C(C(OC3OCC(CN)O)CO)O)O"                                                                                                                          
# 
_pdbx_chem_comp_identifier.comp_id           A1H5X 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(2~{R},3~{S},4~{R},5~{S},6~{S})-6-[(2~{S})-3-azanyl-2-oxidanyl-propoxy]-2-(hydroxymethyl)-5-(4-phenyl-1,2,3-triazol-1-yl)oxane-3,4-diol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1H5X "Create component" 2024-03-11 PDBE 
A1H5X "Initial release"  2024-11-13 RCSB 
# 
