data_A1ITV
# 
_chem_comp.id                                    A1ITV 
_chem_comp.name                                  "(1~{R})-~{N}-[4-[2,4-bis(oxidanylidene)-1~{H}-pyrimidin-5-yl]phenyl]-~{N}-(3-chlorophenyl)-3-oxidanylidene-1,2-dihydroindene-1-carboxamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C26 H18 Cl N3 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "(1R)-N-(3-chlorophenyl)-N-[4-(2,4-dioxo-1H-pyrimidin-5-yl)phenyl]-3-oxo-indane-1-carboxamide" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2024-11-12 
_chem_comp.pdbx_modified_date                    2024-11-22 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        471.892 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1ITV 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        9HD8 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1ITV C4  C1  C  0 1 N N N N N N 8.907  -0.023 20.911 -1.590 -0.716 -0.315 C4  A1ITV 1  
A1ITV C14 C2  C  0 1 Y N N N N N 8.289  -1.279 23.903 1.156  -1.084 -0.438 C14 A1ITV 2  
A1ITV C5  C3  C  0 1 Y N N N N N 9.095  -1.648 22.838 0.616  0.099  0.051  C5  A1ITV 3  
A1ITV C6  C4  C  0 1 Y N N N N N 9.604  -2.926 22.764 1.449  1.087  0.562  C6  A1ITV 4  
A1ITV C11 C5  C  0 1 N N N N N N 7.686  -6.577 27.740 7.537  -0.868 0.150  C11 A1ITV 5  
A1ITV C7  C6  C  0 1 Y N N N N N 9.246  -3.859 23.717 2.814  0.895  0.586  C7  A1ITV 6  
A1ITV C8  C7  C  0 1 Y N N N N N 8.421  -3.522 24.788 3.358  -0.292 0.097  C8  A1ITV 7  
A1ITV C9  C8  C  0 1 N N N N N N 8.123  -4.561 25.809 4.826  -0.501 0.121  C9  A1ITV 8  
A1ITV C10 C9  C  0 1 N N N N N N 9.157  -5.401 26.254 5.380  -1.479 0.892  C10 A1ITV 9  
A1ITV C12 C10 C  0 1 N N N N N N 6.797  -4.726 26.386 5.721  0.344  -0.682 C12 A1ITV 10 
A1ITV C13 C11 C  0 1 Y N N N N N 7.944  -2.217 24.860 2.520  -1.284 -0.410 C13 A1ITV 11 
A1ITV N1  N1  N  0 1 N N N N N N 9.574  -0.650 21.912 -0.770 0.297  0.027  N1  A1ITV 12 
A1ITV N2  N2  N  0 1 N N N N N N 8.935  -6.366 27.175 6.736  -1.648 0.893  N2  A1ITV 13 
A1ITV C3  C12 C  0 1 N N R N N N 7.632  -0.665 20.426 -3.084 -0.536 -0.236 C3  A1ITV 14 
A1ITV N3  N3  N  0 1 N N N N N N 6.671  -5.744 27.314 7.049  0.115  -0.627 N3  A1ITV 15 
A1ITV O1  O1  O  0 1 N N N N N N 7.221  0.619  17.128 -4.982 -1.515 2.664  O1  A1ITV 16 
A1ITV C1  C13 C  0 1 N N N N N N 7.132  0.303  18.296 -4.431 -1.376 1.592  C1  A1ITV 17 
A1ITV C2  C14 C  0 1 N N N N N N 7.776  -0.896 18.915 -3.504 -0.247 1.212  C2  A1ITV 18 
A1ITV O2  O2  O  0 1 N N N N N N 9.361  0.959  20.363 -1.125 -1.772 -0.691 O2  A1ITV 19 
A1ITV O3  O3  O  0 1 N N N N N N 7.478  -7.450 28.577 8.738  -1.054 0.183  O3  A1ITV 20 
A1ITV O4  O4  O  0 1 N N N N N N 5.801  -4.097 26.080 5.272  1.230  -1.386 O4  A1ITV 21 
A1ITV C15 C15 C  0 1 Y N N N N N 10.969 -0.306 22.094 -1.305 1.549  0.358  C15 A1ITV 22 
A1ITV C16 C16 C  0 1 Y N N N N N 11.300 0.703  22.975 -1.205 2.025  1.659  C16 A1ITV 23 
A1ITV C17 C17 C  0 1 Y N N N N N 12.633 1.025  23.154 -1.733 3.260  1.983  C17 A1ITV 24 
A1ITV C18 C18 C  0 1 Y N N N N N 13.628 0.300  22.542 -2.361 4.021  1.015  C18 A1ITV 25 
A1ITV C19 C19 C  0 1 Y N N N N N 13.285 -0.746 21.721 -2.462 3.549  -0.283 C19 A1ITV 26 
A1ITV CL1 CL1 CL 0 0 N N N N N N 14.538 -1.654 20.908 -3.252 4.508  -1.495 CL1 A1ITV 27 
A1ITV C20 C20 C  0 1 Y N N N N N 11.960 -1.059 21.483 -1.930 2.318  -0.614 C20 A1ITV 28 
A1ITV C21 C21 C  0 1 Y N N N N N 6.550  0.384  20.558 -3.782 -1.815 -0.632 C21 A1ITV 29 
A1ITV C22 C22 C  0 1 Y N N N N N 5.853  0.808  21.687 -3.756 -2.521 -1.819 C22 A1ITV 30 
A1ITV C23 C23 C  0 1 Y N N N N N 4.922  1.829  21.543 -4.488 -3.687 -1.956 C23 A1ITV 31 
A1ITV C24 C24 C  0 1 Y N N N N N 4.670  2.369  20.290 -5.253 -4.155 -0.902 C24 A1ITV 32 
A1ITV C25 C25 C  0 1 Y N N N N N 5.346  1.951  19.165 -5.290 -3.463 0.288  C25 A1ITV 33 
A1ITV C26 C26 C  0 1 Y N N N N N 6.287  0.933  19.321 -4.551 -2.279 0.436  C26 A1ITV 34 
A1ITV H10 H1  H  0 1 N N N N N N 7.931  -0.263 23.986 0.506  -1.850 -0.834 H10 A1ITV 35 
A1ITV H4  H2  H  0 1 N N N N N N 10.279 -3.197 21.965 1.026  2.006  0.941  H4  A1ITV 36 
A1ITV H5  H3  H  0 1 N N N N N N 9.613  -4.871 23.630 3.461  1.663  0.983  H5  A1ITV 37 
A1ITV H6  H4  H  0 1 N N N N N N 10.151 -5.273 25.852 4.751  -2.118 1.495  H6  A1ITV 38 
A1ITV H9  H5  H  0 1 N N N N N N 7.295  -1.932 25.675 2.939  -2.204 -0.790 H9  A1ITV 39 
A1ITV H7  H6  H  0 1 N N N N N N 9.698  -6.947 27.458 7.127  -2.345 1.443  H7  A1ITV 40 
A1ITV H3  H7  H  0 1 N N N N N N 7.391  -1.591 20.968 -3.398 0.279  -0.888 H3  A1ITV 41 
A1ITV H8  H8  H  0 1 N N N N N N 5.765  -5.889 27.711 7.656  0.663  -1.149 H8  A1ITV 42 
A1ITV H2  H9  H  0 1 N N N N N N 7.258  -1.817 18.610 -2.631 -0.239 1.864  H2  A1ITV 43 
A1ITV H1  H10 H  0 1 N N N N N N 8.836  -0.960 18.630 -4.028 0.707  1.269  H1  A1ITV 44 
A1ITV H11 H11 H  0 1 N N N N N N 10.530 1.233  23.516 -0.715 1.431  2.416  H11 A1ITV 45 
A1ITV H12 H12 H  0 1 N N N N N N 12.897 1.860  23.785 -1.656 3.631  2.994  H12 A1ITV 46 
A1ITV H13 H13 H  0 1 N N N N N N 14.666 0.550  22.705 -2.773 4.986  1.271  H13 A1ITV 47 
A1ITV H14 H14 H  0 1 N N N N N N 11.700 -1.879 20.830 -2.005 1.952  -1.628 H14 A1ITV 48 
A1ITV H15 H15 H  0 1 N N N N N N 6.032  0.354  22.651 -3.160 -2.161 -2.645 H15 A1ITV 49 
A1ITV H16 H16 H  0 1 N N N N N N 4.394  2.203  22.408 -4.462 -4.233 -2.887 H16 A1ITV 50 
A1ITV H17 H17 H  0 1 N N N N N N 3.921  3.141  20.194 -5.824 -5.065 -1.014 H17 A1ITV 51 
A1ITV H18 H18 H  0 1 N N N N N N 5.155  2.394  18.199 -5.889 -3.831 1.108  H18 A1ITV 52 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1ITV O1  C1  DOUB N N 1  
A1ITV C1  C2  SING N N 2  
A1ITV C2  C3  SING N N 3  
A1ITV C3  C4  SING N N 4  
A1ITV C4  O2  DOUB N N 5  
A1ITV C4  N1  SING N N 6  
A1ITV N1  C5  SING N N 7  
A1ITV C5  C6  DOUB Y N 8  
A1ITV C6  C7  SING Y N 9  
A1ITV C7  C8  DOUB Y N 10 
A1ITV C8  C9  SING N N 11 
A1ITV C9  C10 DOUB N N 12 
A1ITV C10 N2  SING N N 13 
A1ITV N2  C11 SING N N 14 
A1ITV C11 O3  DOUB N N 15 
A1ITV C11 N3  SING N N 16 
A1ITV N3  C12 SING N N 17 
A1ITV C12 O4  DOUB N N 18 
A1ITV C8  C13 SING Y N 19 
A1ITV C13 C14 DOUB Y N 20 
A1ITV N1  C15 SING N N 21 
A1ITV C15 C16 DOUB Y N 22 
A1ITV C16 C17 SING Y N 23 
A1ITV C17 C18 DOUB Y N 24 
A1ITV C18 C19 SING Y N 25 
A1ITV C19 CL1 SING N N 26 
A1ITV C19 C20 DOUB Y N 27 
A1ITV C3  C21 SING N N 28 
A1ITV C21 C22 DOUB Y N 29 
A1ITV C22 C23 SING Y N 30 
A1ITV C23 C24 DOUB Y N 31 
A1ITV C24 C25 SING Y N 32 
A1ITV C25 C26 DOUB Y N 33 
A1ITV C1  C26 SING N N 34 
A1ITV C5  C14 SING Y N 35 
A1ITV C15 C20 SING Y N 36 
A1ITV C21 C26 SING Y N 37 
A1ITV C9  C12 SING N N 38 
A1ITV C14 H10 SING N N 39 
A1ITV C6  H4  SING N N 40 
A1ITV C7  H5  SING N N 41 
A1ITV C10 H6  SING N N 42 
A1ITV C13 H9  SING N N 43 
A1ITV N2  H7  SING N N 44 
A1ITV C3  H3  SING N N 45 
A1ITV N3  H8  SING N N 46 
A1ITV C2  H2  SING N N 47 
A1ITV C2  H1  SING N N 48 
A1ITV C16 H11 SING N N 49 
A1ITV C17 H12 SING N N 50 
A1ITV C18 H13 SING N N 51 
A1ITV C20 H14 SING N N 52 
A1ITV C22 H15 SING N N 53 
A1ITV C23 H16 SING N N 54 
A1ITV C24 H17 SING N N 55 
A1ITV C25 H18 SING N N 56 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1ITV InChI            InChI                1.06  "InChI=1S/C26H18ClN3O4/c27-16-4-3-5-18(12-16)30(25(33)21-13-23(31)20-7-2-1-6-19(20)21)17-10-8-15(9-11-17)22-14-28-26(34)29-24(22)32/h1-12,14,21H,13H2,(H2,28,29,32,34)/t21-/m1/s1" 
A1ITV InChIKey         InChI                1.06  WUIFAQSQLPAHRA-OAQYLSRUSA-N                                                                                                                                                        
A1ITV SMILES_CANONICAL CACTVS               3.385 "Clc1cccc(c1)N(C(=O)[C@@H]2CC(=O)c3ccccc23)c4ccc(cc4)C5=CNC(=O)NC5=O"                                                                                                              
A1ITV SMILES           CACTVS               3.385 "Clc1cccc(c1)N(C(=O)[CH]2CC(=O)c3ccccc23)c4ccc(cc4)C5=CNC(=O)NC5=O"                                                                                                                
A1ITV SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)[C@@H](CC2=O)C(=O)N(c3ccc(cc3)C4=CNC(=O)NC4=O)c5cccc(c5)Cl"                                                                                                            
A1ITV SMILES           "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)C(CC2=O)C(=O)N(c3ccc(cc3)C4=CNC(=O)NC4=O)c5cccc(c5)Cl"                                                                                                                 
# 
_pdbx_chem_comp_identifier.comp_id           A1ITV 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(1~{R})-~{N}-[4-[2,4-bis(oxidanylidene)-1~{H}-pyrimidin-5-yl]phenyl]-~{N}-(3-chlorophenyl)-3-oxidanylidene-1,2-dihydroindene-1-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1ITV "Create component" 2024-11-12 PDBE 
A1ITV "Initial release"  2024-11-27 RCSB 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      A1ITV 
_pdbx_chem_comp_synonyms.name         "(1R)-N-(3-chlorophenyl)-N-[4-(2,4-dioxo-1H-pyrimidin-5-yl)phenyl]-3-oxo-indane-1-carboxamide" 
_pdbx_chem_comp_synonyms.provenance   AUTHOR 
_pdbx_chem_comp_synonyms.type         ? 
# 
