data_OJY
#

_chem_comp.id                                   OJY
_chem_comp.name                                 "5-[5-(hydroxymethyl)-1H-imidazol-2-yl]-L-norvaline"
_chem_comp.type                                 "L-peptide linking"
_chem_comp.pdbx_type                            ATOMP
_chem_comp.formula                              "C9 H15 N3 O3"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-06-26
_chem_comp.pdbx_modified_date                   2019-12-06
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       213.234
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    OJY
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6PGD
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
OJY  C11  C1   C  0  1  N  N  N  -1.921   -5.547  -4.646  -0.250  -0.654  -0.932  C11  OJY   1  
OJY  C14  C2   C  0  1  Y  N  N  -5.298   -4.227  -5.124  -3.751   0.087  -0.196  C14  OJY   2  
OJY  C10  C3   C  0  1  N  N  N  -1.784   -7.050  -4.888   0.758  -0.118   0.087  C10  OJY   3  
OJY  C12  C4   C  0  1  Y  N  N  -3.348   -5.000  -4.550  -1.647  -0.484  -0.393  C12  OJY   4  
OJY  C17  C5   C  0  1  N  N  N  -6.454   -3.741  -5.985  -5.117   0.662  -0.467  C17  OJY   5  
OJY  C15  C6   C  0  1  Y  N  N  -5.178   -4.185  -3.732  -3.373  -0.602   0.897  C15  OJY   6  
OJY  C06  C11  C  0  1  N  N  N  -0.511   -9.614  -4.506   4.584  -0.037   0.076  C06  OJY   7  
OJY  O07  O1   O  0  1  N  N  N  -0.533   -9.620  -5.718   5.226   0.837  -0.458  O07  OJY   8  
OJY  C08  C12  C  0  1  N  N  S  -1.819   -9.334  -3.766   3.184   0.245   0.559  C08  OJY   9  
OJY  C09  C13  C  0  1  N  N  N  -2.003   -7.816  -3.587   2.176  -0.291  -0.460  C09  OJY  10  
OJY  N13  N2   N  0  1  Y  N  N  -4.137   -4.752  -5.586  -2.658   0.159  -1.017  N13  OJY  11  
OJY  N16  N3   N  0  1  Y  N  N  -3.959   -4.647  -3.411  -2.082  -0.937   0.751  N16  OJY  12  
OJY  O18  O2   O  0  1  N  N  N  -7.552   -3.346  -5.192  -5.983   0.373   0.633  O18  OJY  13  
OJY  N19  N4   N  0  1  N  N  N  -1.840   -9.932  -2.435   3.001   1.694   0.713  N19  OJY  14  
OJY  H1   H1   H  0  1  N  N  N  -1.419   -5.027  -5.475  -0.151  -0.102  -1.866  H1   OJY  15  
OJY  H2   H2   H  0  1  N  N  N  -1.408   -5.312  -3.702  -0.057  -1.712  -1.112  H2   OJY  16  
OJY  H3   H3   H  0  1  N  N  N  -2.533   -7.369  -5.628   0.565   0.939   0.268  H3   OJY  17  
OJY  H4   H4   H  0  1  N  N  N  -0.776   -7.266  -5.271   0.659  -0.670   1.021  H4   OJY  18  
OJY  H5   H5   H  0  1  N  N  N  -6.118   -2.883  -6.585  -5.038   1.742  -0.593  H5   OJY  19  
OJY  H6   H6   H  0  1  N  N  N  -6.770   -4.555  -6.654  -5.525   0.219  -1.375  H6   OJY  20  
OJY  H7   H7   H  0  1  N  N  N  -5.931   -3.842  -3.038  -3.999  -0.843   1.744  H7   OJY  21  
OJY  H17  H17  H  0  1  N  N  N  -2.657   -9.724  -4.363   3.026  -0.246   1.519  H17  OJY  22  
OJY  H18  H18  H  0  1  N  N  N  -1.280   -7.458  -2.839   2.370  -1.349  -0.640  H18  OJY  23  
OJY  H19  H19  H  0  1  N  N  N  -3.026   -7.623  -3.230   2.276   0.261  -1.394  H19  OJY  24  
OJY  H20  H20  H  0  1  N  N  N  -3.914   -4.923  -6.546  -2.617   0.591  -1.884  H20  OJY  25  
OJY  H22  H22  H  0  1  N  N  N  -8.258   -3.048  -5.754  -6.881   0.715   0.527  H22  OJY  26  
OJY  H23  H23  H  0  1  N  N  N  -2.711   -9.724  -1.989   3.143   2.171  -0.165  H23  OJY  27  
OJY  OXT  OXT  O  0  1  N  Y  N   0.700   -9.855  -3.765   5.118  -1.257   0.240  OXT  OJY  28  
OJY  HXT  HXT  H  0  1  N  Y  N   1.417  -10.007  -4.370   6.019  -1.390  -0.086  HXT  OJY  29  
OJY  H8   H8   H  0  1  N  Y  N  -1.734  -10.923  -2.513   2.092   1.905   1.097  H8   OJY  30  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
OJY  C11  C12  SING  N  N   1  
OJY  C11  C10  SING  N  N   2  
OJY  C14  C17  SING  N  N   3  
OJY  C14  N13  SING  Y  N   4  
OJY  C14  C15  DOUB  Y  N   5  
OJY  C10  C09  SING  N  N   6  
OJY  C12  N13  SING  Y  N   7  
OJY  C12  N16  DOUB  Y  N   8  
OJY  C17  O18  SING  N  N   9  
OJY  C15  N16  SING  Y  N  10  
OJY  C06  O07  DOUB  N  N  11  
OJY  C06  C08  SING  N  N  12  
OJY  C08  N19  SING  N  N  13  
OJY  C08  C09  SING  N  N  14  
OJY  C11  H1   SING  N  N  15  
OJY  C11  H2   SING  N  N  16  
OJY  C10  H3   SING  N  N  17  
OJY  C10  H4   SING  N  N  18  
OJY  C17  H5   SING  N  N  19  
OJY  C17  H6   SING  N  N  20  
OJY  C15  H7   SING  N  N  21  
OJY  C08  H17  SING  N  N  22  
OJY  C09  H18  SING  N  N  23  
OJY  C09  H19  SING  N  N  24  
OJY  N13  H20  SING  N  N  25  
OJY  O18  H22  SING  N  N  26  
OJY  N19  H23  SING  N  N  27  
OJY  C06  OXT  SING  N  N  28  
OJY  OXT  HXT  SING  N  N  29  
OJY  N19  H8   SING  N  N  30  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
OJY  SMILES            ACDLabs               12.01  "C(c1nc(CO)cn1)CCC(C(=O)O)N"  
OJY  InChI             InChI                 1.03   "InChI=1S/C9H15N3O3/c10-7(9(14)15)2-1-3-8-11-4-6(5-13)12-8/h4,7,13H,1-3,5,10H2,(H,11,12)(H,14,15)/t7-/m0/s1"  
OJY  InChIKey          InChI                 1.03   LQZCDDAMPJTCPF-ZETCQYMHSA-N  
OJY  SMILES_CANONICAL  CACTVS                3.385  "N[C@@H](CCCc1[nH]c(CO)cn1)C(O)=O"  
OJY  SMILES            CACTVS                3.385  "N[CH](CCCc1[nH]c(CO)cn1)C(O)=O"  
OJY  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1c([nH]c(n1)CCC[C@@H](C(=O)O)N)CO"  
OJY  SMILES            "OpenEye OEToolkits"  2.0.7  "c1c([nH]c(n1)CCCC(C(=O)O)N)CO"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
OJY  "SYSTEMATIC NAME"  ACDLabs               12.01  "5-[5-(hydroxymethyl)-1H-imidazol-2-yl]-L-norvaline"  
OJY  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "(2~{S})-2-azanyl-5-[5-(hydroxymethyl)-1~{H}-imidazol-2-yl]pentanoic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
OJY  "Create component"  2019-06-26  RCSB  
OJY  "Initial release"   2019-12-11  RCSB  
##
