data_TN9
# 
_chem_comp.id                                    TN9 
_chem_comp.name                                  "N-[[1-[2-[2-(2-hexoxyethoxy)ethoxy]ethyl]-1,2,3-triazol-4-yl]methyl]-1-(1H-1,2,3-triazol-4-yl)-N-(2H-1,2,3-triazol-4-ylmethyl)methanamine" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C21 H36 N10 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-04-27 
_chem_comp.pdbx_modified_date                    2024-04-12 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        476.576 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     TN9 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8J1O 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
TN9 C3  C1  C 0 1 Y N N N N N 12.914 -22.053 0.959   3.120   2.512  0.567  C3  TN9 1  
TN9 C4  C2  C 0 1 Y N N N N N 13.467 -21.633 -0.285  4.386   1.936  0.693  C4  TN9 2  
TN9 C6  C3  C 0 1 N N N N N N 14.623 -22.274 -1.061  4.716   0.466  0.726  C6  TN9 3  
TN9 C8  C4  C 0 1 N N N N N N 15.709 -24.410 -0.571  6.248   0.770  -1.124 C8  TN9 4  
TN9 C9  C5  C 0 1 N N N N N N 14.298 -24.223 -2.481  3.954   0.123  -1.547 C9  TN9 5  
TN9 C10 C6  C 0 1 Y N N N N N 15.503 -24.908 0.877   7.442   0.500  -0.244 C10 TN9 6  
TN9 C11 C7  C 0 1 Y N N N N N 16.151 -26.053 1.507   8.384   -0.454 -0.428 C11 TN9 7  
TN9 C15 C8  C 0 1 Y N N N N N 15.059 -23.313 -3.461  2.946   -0.951 -1.229 C15 TN9 8  
TN9 C19 C9  C 0 1 Y N N N N N 14.511 -22.382 -4.378  1.855   -0.830 -0.437 C19 TN9 9  
TN9 C20 C10 C 0 1 N N N N N N 15.534 -20.788 -6.073  0.024   -2.389 0.281  C20 TN9 10 
TN9 C21 C11 C 0 1 N N N N N N 16.731 -19.856 -5.852  -1.005  -2.953 -0.701 C21 TN9 11 
TN9 C23 C12 C 0 1 N N N N N N 15.354 -18.197 -6.874  -3.231  -3.833 -0.825 C23 TN9 12 
TN9 C24 C13 C 0 1 N N N N N N 15.461 -16.716 -7.103  -4.456  -4.160 0.032  C24 TN9 13 
TN9 C26 C14 C 0 1 N N N N N N 16.565 -15.202 -8.624  -6.151  -3.146 1.390  C26 TN9 14 
TN9 C27 C15 C 0 1 N N N N N N 17.757 -15.138 -9.615  -6.642  -1.793 1.909  C27 TN9 15 
TN9 C29 C16 C 0 1 N N N N N N 19.909 -14.234 -9.745  -7.570  0.296  1.189  C29 TN9 16 
TN9 C30 C17 C 0 1 N N N N N N 20.964 -13.631 -8.814  -8.019  1.058  -0.060 C30 TN9 17 
TN9 C31 C18 C 0 1 N N N N N N 20.652 -12.155 -8.383  -8.535  2.441  0.344  C31 TN9 18 
TN9 C32 C19 C 0 1 N N N N N N 21.928 -11.525 -7.825  -8.984  3.203  -0.904 C32 TN9 19 
TN9 C33 C20 C 0 1 N N N N N N 21.654 -10.258 -6.974  -9.499  4.585  -0.500 C33 TN9 20 
TN9 C34 C21 C 0 1 N N N N N N 20.612 -9.421  -7.609  -9.949  5.347  -1.748 C34 TN9 21 
TN9 N1  N1  N 0 1 Y N N N N N 11.860 -20.277 0.279   4.570   4.040  0.717  N1  TN9 22 
TN9 N2  N2  N 0 1 Y N N N N N 11.914 -21.160 1.251   3.312   3.811  0.586  N2  TN9 23 
TN9 N5  N3  N 0 1 Y N N N N N 12.758 -20.517 -0.651  5.231   2.938  0.778  N5  TN9 24 
TN9 N7  N4  N 0 1 N N N N N N 14.497 -23.778 -1.093  5.090   0.018  -0.622 N7  TN9 25 
TN9 N12 N5  N 0 1 Y N N N N N 15.663 -26.096 2.776   9.256   -0.326 0.599  N12 TN9 26 
TN9 N13 N6  N 0 1 Y N N N N N 14.800 -25.093 2.950   8.857   0.643  1.347  N13 TN9 27 
TN9 N14 N7  N 0 1 Y N N N N N 14.688 -24.376 1.836   7.781   1.160  0.869  N14 TN9 28 
TN9 N16 N8  N 0 1 Y N N N N N 16.435 -23.233 -3.632  2.951   -2.211 -1.678 N16 TN9 29 
TN9 N17 N9  N 0 1 Y N N N N N 16.703 -22.350 -4.555  1.933   -2.831 -1.193 N17 TN9 30 
TN9 N18 N10 N 0 1 Y N N N N N 15.594 -21.819 -5.029  1.249   -2.040 -0.442 N18 TN9 31 
TN9 O22 O1  O 0 1 N N N N N N 16.316 -18.536 -5.879  -2.200  -3.294 0.005  O22 TN9 32 
TN9 O25 O2  O 0 1 N N N N N N 16.607 -16.454 -7.898  -4.997  -2.951 0.570  O25 TN9 33 
TN9 O28 O3  O 0 1 N N N N N N 18.683 -14.222 -9.078  -7.089  -0.995 0.811  O28 TN9 34 
TN9 H1  H1  H 0 1 N N N N N N 13.220 -22.902 1.552   2.177   1.995  0.468  H1  TN9 35 
TN9 H2  H2  H 0 1 N N N N N N 15.573 -22.005 -0.576  5.547   0.295  1.409  H2  TN9 36 
TN9 H3  H3  H 0 1 N N N N N N 14.617 -21.892 -2.093  3.845   -0.095 1.066  H3  TN9 37 
TN9 H4  H4  H 0 1 N N N N N N 15.971 -25.266 -1.211  6.022   1.836  -1.112 H4  TN9 38 
TN9 H5  H5  H 0 1 N N N N N N 16.530 -23.678 -0.585  6.470   0.457  -2.144 H5  TN9 39 
TN9 H6  H6  H 0 1 N N N N N N 13.225 -24.192 -2.719  4.306   -0.001 -2.571 H6  TN9 40 
TN9 H7  H7  H 0 1 N N N N N N 14.667 -25.254 -2.586  3.487   1.102  -1.439 H7  TN9 41 
TN9 H8  H8  H 0 1 N N N N N N 16.868 -26.726 1.060   8.431   -1.172 -1.233 H8  TN9 42 
TN9 H9  H9  H 0 1 N N N N N N 13.466 -22.159 -4.536  1.534   0.054  0.093  H9  TN9 43 
TN9 H10 H10 H 0 1 N N N N N N 14.594 -20.222 -5.991  -0.382  -1.498 0.760  H10 TN9 44 
TN9 H11 H11 H 0 1 N N N N N N 15.596 -21.254 -7.068  0.251   -3.138 1.040  H11 TN9 45 
TN9 H12 H12 H 0 1 N N N N N N 17.187 -20.074 -4.875  -1.232  -2.204 -1.459 H12 TN9 46 
TN9 H13 H13 H 0 1 N N N N N N 17.472 -20.021 -6.648  -0.599  -3.844 -1.180 H13 TN9 47 
TN9 H14 H14 H 0 1 N N N N N N 14.343 -18.453 -6.524  -2.872  -4.742 -1.306 H14 TN9 48 
TN9 H15 H15 H 0 1 N N N N N N 15.568 -18.740 -7.807  -3.504  -3.102 -1.586 H15 TN9 49 
TN9 H16 H16 H 0 1 N N N N N N 15.556 -16.199 -6.137  -5.209  -4.652 -0.584 H16 TN9 50 
TN9 H17 H17 H 0 1 N N N N N N 14.561 -16.357 -7.624  -4.164  -4.821 0.847  H17 TN9 51 
TN9 H18 H18 H 0 1 N N N N N N 16.633 -14.364 -7.914  -5.893  -3.787 2.233  H18 TN9 52 
TN9 H19 H19 H 0 1 N N N N N N 15.620 -15.134 -9.183  -6.939  -3.617 0.803  H19 TN9 53 
TN9 H20 H20 H 0 1 N N N N N N 17.412 -14.794 -10.601 -7.466  -1.948 2.605  H20 TN9 54 
TN9 H21 H21 H 0 1 N N N N N N 18.220 -16.131 -9.715  -5.826  -1.282 2.421  H21 TN9 55 
TN9 H22 H22 H 0 1 N N N N N N 20.184 -15.268 -10.000 -6.773  0.850  1.685  H22 TN9 56 
TN9 H23 H23 H 0 1 N N N N N N 19.838 -13.636 -10.665 -8.414  0.185  1.869  H23 TN9 57 
TN9 H24 H24 H 0 1 N N N N N N 21.024 -14.252 -7.908  -7.175  1.170  -0.741 H24 TN9 58 
TN9 H25 H25 H 0 1 N N N N N N 21.934 -13.644 -9.333  -8.816  0.504  -0.557 H25 TN9 59 
TN9 H26 H26 H 0 1 N N N N N N 20.307 -11.580 -9.255  -9.379  2.329  1.025  H26 TN9 60 
TN9 H27 H27 H 0 1 N N N N N N 19.870 -12.153 -7.610  -7.738  2.995  0.841  H27 TN9 61 
TN9 H28 H28 H 0 1 N N N N N N 22.439 -12.267 -7.194  -8.140  3.315  -1.585 H28 TN9 62 
TN9 H29 H29 H 0 1 N N N N N N 22.580 -11.248 -8.667  -9.781  2.649  -1.401 H29 TN9 63 
TN9 H30 H30 H 0 1 N N N N N N 21.314 -10.561 -5.973  -10.343 4.474  0.181  H30 TN9 64 
TN9 H31 H31 H 0 1 N N N N N N 22.582 -9.674  -6.885  -8.703  5.139  -0.003 H31 TN9 65 
TN9 H32 H32 H 0 1 N N N N N N 20.432 -8.528  -6.992  -9.105  5.459  -2.429 H32 TN9 66 
TN9 H33 H33 H 0 1 N N N N N N 20.949 -9.113  -8.610  -10.745 4.794  -2.245 H33 TN9 67 
TN9 H34 H34 H 0 1 N N N N N N 19.681 -10.000 -7.698  -10.316 6.332  -1.460 H34 TN9 68 
TN9 H35 H35 H 0 1 N N N N N N 11.214 -19.514 0.250   4.968   4.924  0.758  H35 TN9 69 
TN9 H37 H37 H 0 1 N N N N N N 15.912 -26.772 3.469   10.045  -0.870 0.746  H37 TN9 70 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
TN9 C29 O28 SING N N 1  
TN9 C29 C30 SING N N 2  
TN9 C27 O28 SING N N 3  
TN9 C27 C26 SING N N 4  
TN9 C30 C31 SING N N 5  
TN9 C26 O25 SING N N 6  
TN9 C31 C32 SING N N 7  
TN9 O25 C24 SING N N 8  
TN9 C32 C33 SING N N 9  
TN9 C34 C33 SING N N 10 
TN9 C24 C23 SING N N 11 
TN9 C23 O22 SING N N 12 
TN9 C20 C21 SING N N 13 
TN9 C20 N18 SING N N 14 
TN9 O22 C21 SING N N 15 
TN9 N18 N17 SING Y N 16 
TN9 N18 C19 SING Y N 17 
TN9 N17 N16 DOUB Y N 18 
TN9 C19 C15 DOUB Y N 19 
TN9 N16 C15 SING Y N 20 
TN9 C15 C9  SING N N 21 
TN9 C9  N7  SING N N 22 
TN9 N7  C6  SING N N 23 
TN9 N7  C8  SING N N 24 
TN9 C6  C4  SING N N 25 
TN9 N5  C4  DOUB Y N 26 
TN9 N5  N1  SING Y N 27 
TN9 C8  C10 SING N N 28 
TN9 C4  C3  SING Y N 29 
TN9 N1  N2  SING Y N 30 
TN9 C10 C11 DOUB Y N 31 
TN9 C10 N14 SING Y N 32 
TN9 C3  N2  DOUB Y N 33 
TN9 C11 N12 SING Y N 34 
TN9 N14 N13 DOUB Y N 35 
TN9 N12 N13 SING Y N 36 
TN9 C3  H1  SING N N 37 
TN9 C6  H2  SING N N 38 
TN9 C6  H3  SING N N 39 
TN9 C8  H4  SING N N 40 
TN9 C8  H5  SING N N 41 
TN9 C9  H6  SING N N 42 
TN9 C9  H7  SING N N 43 
TN9 C11 H8  SING N N 44 
TN9 C19 H9  SING N N 45 
TN9 C20 H10 SING N N 46 
TN9 C20 H11 SING N N 47 
TN9 C21 H12 SING N N 48 
TN9 C21 H13 SING N N 49 
TN9 C23 H14 SING N N 50 
TN9 C23 H15 SING N N 51 
TN9 C24 H16 SING N N 52 
TN9 C24 H17 SING N N 53 
TN9 C26 H18 SING N N 54 
TN9 C26 H19 SING N N 55 
TN9 C27 H20 SING N N 56 
TN9 C27 H21 SING N N 57 
TN9 C29 H22 SING N N 58 
TN9 C29 H23 SING N N 59 
TN9 C30 H24 SING N N 60 
TN9 C30 H25 SING N N 61 
TN9 C31 H26 SING N N 62 
TN9 C31 H27 SING N N 63 
TN9 C32 H28 SING N N 64 
TN9 C32 H29 SING N N 65 
TN9 C33 H30 SING N N 66 
TN9 C33 H31 SING N N 67 
TN9 C34 H32 SING N N 68 
TN9 C34 H33 SING N N 69 
TN9 C34 H34 SING N N 70 
TN9 N1  H35 SING N N 71 
TN9 N12 H37 SING N N 72 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
TN9 InChI            InChI                1.06  "InChI=1S/C21H36N10O3/c1-2-3-4-5-7-32-9-11-34-12-10-33-8-6-31-18-21(26-29-31)17-30(15-19-13-22-27-24-19)16-20-14-23-28-25-20/h13-14,18H,2-12,15-17H2,1H3,(H,22,24,27)(H,23,25,28)" 
TN9 InChIKey         InChI                1.06  TULQAAWRGBJEDU-UHFFFAOYSA-N                                                                                                                                                        
TN9 SMILES_CANONICAL CACTVS               3.385 "CCCCCCOCCOCCOCCn1cc(CN(Cc2cn[nH]n2)Cc3c[nH]nn3)nn1"                                                                                                                               
TN9 SMILES           CACTVS               3.385 "CCCCCCOCCOCCOCCn1cc(CN(Cc2cn[nH]n2)Cc3c[nH]nn3)nn1"                                                                                                                               
TN9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCCCCOCCOCCOCCn1cc(nn1)CN(Cc2c[nH]nn2)Cc3cn[nH]n3"                                                                                                                               
TN9 SMILES           "OpenEye OEToolkits" 2.0.7 "CCCCCCOCCOCCOCCn1cc(nn1)CN(Cc2c[nH]nn2)Cc3cn[nH]n3"                                                                                                                               
# 
_pdbx_chem_comp_identifier.comp_id           TN9 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "~{N}-[[1-[2-[2-(2-hexoxyethoxy)ethoxy]ethyl]-1,2,3-triazol-4-yl]methyl]-1-(1~{H}-1,2,3-triazol-4-yl)-~{N}-(2~{H}-1,2,3-triazol-4-ylmethyl)methanamine" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
TN9 "Create component" 2023-04-27 PDBJ 
TN9 "Initial release"  2024-04-17 RCSB 
# 
