data_Y0Q
# 
_chem_comp.id                                    Y0Q 
_chem_comp.name                                  "[(3aR,3bR,6aR,6bS)-5-(1H-benzotriazole-5-carbonyl)octahydrocyclobuta[1,2-c:3,4-c']dipyrrol-2(1H)-yl][5-chloro-4-(cyclopropylmethoxy)pyridin-2-yl]methanone" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C25 H25 Cl N6 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-06-09 
_chem_comp.pdbx_modified_date                    2024-12-13 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        492.957 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     Y0Q 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7G37 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
Y0Q C10  C1  C  0 1 N N N N N N -11.022 13.171 51.151 3.329   -0.157 -0.026 C10  Y0Q 1  
Y0Q C15  C2  C  0 1 N N N N N N -10.404 12.227 53.562 5.008   -1.744 0.933  C15  Y0Q 2  
Y0Q C16  C3  C  0 1 Y N N N N N -9.012  12.636 53.699 6.106   -0.784 0.699  C16  Y0Q 3  
Y0Q C18  C4  C  0 1 Y N N N N N -8.693  14.028 53.419 7.264   -0.841 1.487  C18  Y0Q 4  
Y0Q C19  C5  C  0 1 Y N N N N N -7.379  14.541 53.590 8.283   0.040  1.282  C19  Y0Q 5  
Y0Q C20  C6  C  0 1 Y N N N N N -8.083  11.726 54.220 5.989   0.169  -0.306 C20  Y0Q 6  
Y0Q C21  C7  C  0 1 Y N N N N N -6.772  12.288 54.417 7.031   1.074  -0.522 C21  Y0Q 7  
Y0Q C22  C8  C  0 1 Y N N N N N -6.434  13.658 54.099 8.183   1.006  0.283  C22  Y0Q 8  
Y0Q C26  C9  C  0 1 N N N N N N -13.549 9.105  47.537 -2.554  -1.138 -0.970 C26  Y0Q 9  
Y0Q C27  C10 C  0 1 Y N N N N N -12.723 8.916  46.312 -3.416  -0.034 -0.490 C27  Y0Q 10 
Y0Q N1   N1  N  0 1 N N N N N N -13.028 9.742  48.645 -1.225  -0.949 -1.099 N1   Y0Q 11 
Y0Q C2   C11 C  0 1 N N N N N N -13.915 9.785  49.841 -0.266  -1.958 -1.562 C2   Y0Q 12 
Y0Q C3   C12 C  0 1 N N S N N N -12.987 10.375 50.880 1.129   -1.480 -1.120 C3   Y0Q 13 
Y0Q C4   C13 C  0 1 N N R N N N -11.559 10.677 50.259 0.984   0.060  -1.053 C4   Y0Q 14 
Y0Q C5   C14 C  0 1 N N N N N N -11.565 9.924  48.943 -0.513  0.296  -0.796 C5   Y0Q 15 
Y0Q C6   C15 C  0 1 N N S N N N -13.121 11.893 51.139 1.321   -1.453 0.402  C6   Y0Q 16 
Y0Q C7   C16 C  0 1 N N R N N N -11.893 12.231 50.236 1.819   0.004  0.237  C7   Y0Q 17 
Y0Q C8   C17 C  0 1 N N N N N N -12.709 12.125 52.589 2.556   -2.231 0.887  C8   Y0Q 18 
Y0Q N9   N2  N  0 1 N N N N N N -11.269 12.545 52.488 3.740   -1.407 0.625  N9   Y0Q 19 
Y0Q O17  O1  O  0 1 N N N N N N -10.907 11.665 54.573 5.248   -2.839 1.404  O17  Y0Q 20 
Y0Q N23  N3  N  0 1 Y N N N N N -5.077  13.777 54.376 9.015   2.005  -0.157 N23  Y0Q 21 
Y0Q N24  N4  N  0 1 Y N N N N N -4.667  12.544 54.864 8.347   2.652  -1.206 N24  Y0Q 22 
Y0Q N25  N5  N  0 1 Y N N N N N -5.574  11.673 54.869 7.206   2.090  -1.401 N25  Y0Q 23 
Y0Q O28  O2  O  0 1 N N N N N N -14.750 8.698  47.564 -3.044  -2.215 -1.249 O28  Y0Q 24 
Y0Q C29  C18 C  0 1 Y N N N N N -12.683 7.635  45.772 -4.786  -0.236 -0.360 C29  Y0Q 25 
Y0Q C30  C19 C  0 1 Y N N N N N -11.903 7.516  44.634 -5.583  0.811  0.093  C30  Y0Q 26 
Y0Q N31  N6  N  0 1 Y N N N N N -12.091 9.996  45.811 -2.873  1.138  -0.182 N31  Y0Q 27 
Y0Q C32  C20 C  0 1 Y N N N N N -11.334 9.865  44.705 -3.599  2.147  0.249  C32  Y0Q 28 
Y0Q C33  C21 C  0 1 Y N N N N N -11.225 8.609  44.094 -4.971  2.024  0.399  C33  Y0Q 29 
Y0Q O34  O3  O  0 1 N N N N N N -11.713 6.385  43.973 -6.925  0.655  0.233  O34  Y0Q 30 
Y0Q C35  C22 C  0 1 N N N N N N -12.094 5.181  44.622 -7.467  -0.624 -0.105 C35  Y0Q 31 
Y0Q C36  C23 C  0 1 N N N N N N -11.819 4.152  43.511 -8.981  -0.609 0.115  C36  Y0Q 32 
Y0Q CL37 CL1 CL 0 0 N N N N N N -10.254 8.555  42.678 -5.915  3.365  0.968  CL37 Y0Q 33 
Y0Q C38  C24 C  0 1 N N N N N N -10.404 3.998  42.946 -9.768  -1.854 -0.302 C38  Y0Q 34 
Y0Q C39  C25 C  0 1 N N N N N N -10.991 2.910  43.848 -9.549  -1.548 1.181  C39  Y0Q 35 
Y0Q H47  H1  H  0 1 N N N N N N -9.958  13.135 50.875 3.516   -0.216 -1.098 H47  Y0Q 36 
Y0Q H46  H2  H  0 1 N N N N N N -11.375 14.212 51.118 3.874   0.684  0.403  H46  Y0Q 37 
Y0Q H48  H3  H  0 1 N N N N N N -9.475  14.688 53.072 7.348   -1.587 2.263  H48  Y0Q 38 
Y0Q H49  H4  H  0 1 N N N N N N -7.128  15.561 53.338 9.171   -0.011 1.895  H49  Y0Q 39 
Y0Q H50  H5  H  0 1 N N N N N N -8.327  10.700 54.452 5.098   0.209  -0.916 H50  Y0Q 40 
Y0Q H40  H6  H  0 1 N N N N N N -14.790 10.430 49.670 -0.490  -2.923 -1.107 H40  Y0Q 41 
Y0Q H41  H7  H  0 1 N N N N N N -14.252 8.778  50.128 -0.305  -2.039 -2.648 H41  Y0Q 42 
Y0Q H12  H8  H  0 1 N N N N N N -12.927 9.783  51.805 1.958   -1.867 -1.712 H12  Y0Q 43 
Y0Q H11  H9  H  0 1 N N N N N N -10.727 10.419 50.930 1.404   0.626  -1.885 H11  Y0Q 44 
Y0Q H42  H10 H  0 1 N N N N N N -11.061 8.951  49.045 -0.877  1.095  -1.443 H42  Y0Q 45 
Y0Q H43  H11 H  0 1 N N N N N N -11.073 10.511 48.153 -0.670  0.567  0.248  H43  Y0Q 46 
Y0Q H14  H12 H  0 1 N N N N N N -14.074 12.347 50.829 0.417   -1.591 0.996  H14  Y0Q 47 
Y0Q H13  H13 H  0 1 N N N N N N -12.135 12.638 49.243 1.555   0.719  1.016  H13  Y0Q 48 
Y0Q H44  H14 H  0 1 N N N N N N -13.318 12.918 53.048 2.472   -2.426 1.956  H44  Y0Q 49 
Y0Q H45  H15 H  0 1 N N N N N N -12.808 11.201 53.177 2.634   -3.173 0.345  H45  Y0Q 50 
Y0Q H51  H16 H  0 1 N N N N N N -4.509  14.590 54.249 9.894   2.222  0.191  H51  Y0Q 51 
Y0Q H52  H17 H  0 1 N N N N N N -13.216 6.802  46.205 -5.225  -1.191 -0.608 H52  Y0Q 52 
Y0Q H53  H18 H  0 1 N N N N N N -10.817 10.719 44.293 -3.119  3.085  0.489  H53  Y0Q 53 
Y0Q H54  H19 H  0 1 N N N N N N -11.478 4.989  45.513 -7.254  -0.844 -1.151 H54  Y0Q 54 
Y0Q H55  H20 H  0 1 N N N N N N -13.156 5.194  44.907 -7.016  -1.388 0.527  H55  Y0Q 55 
Y0Q H56  H21 H  0 1 N N N N N N -12.638 3.999  42.793 -9.466  0.359  -0.013 H56  Y0Q 56 
Y0Q H58  H22 H  0 1 N N N N N N -10.258 3.804  41.873 -10.770 -1.704 -0.704 H58  Y0Q 57 
Y0Q H57  H23 H  0 1 N N N N N N -9.591  4.640  43.316 -9.206  -2.682 -0.733 H57  Y0Q 58 
Y0Q H59  H24 H  0 1 N N N N N N -10.600 2.770  44.866 -8.844  -2.177 1.726  H59  Y0Q 59 
Y0Q H60  H25 H  0 1 N N N N N N -11.267 1.933  43.423 -10.407 -1.198 1.755  H60  Y0Q 60 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
Y0Q N1  C2   SING N N 1  
Y0Q N1  C5   SING N N 2  
Y0Q N1  C26  SING N N 3  
Y0Q C2  C3   SING N N 4  
Y0Q C3  C4   SING N N 5  
Y0Q C3  C6   SING N N 6  
Y0Q C4  C5   SING N N 7  
Y0Q C4  C7   SING N N 8  
Y0Q C6  C7   SING N N 9  
Y0Q C6  C8   SING N N 10 
Y0Q C7  C10  SING N N 11 
Y0Q C8  N9   SING N N 12 
Y0Q N9  C10  SING N N 13 
Y0Q N9  C15  SING N N 14 
Y0Q C15 C16  SING N N 15 
Y0Q C15 O17  DOUB N N 16 
Y0Q C16 C18  DOUB Y N 17 
Y0Q C16 C20  SING Y N 18 
Y0Q C18 C19  SING Y N 19 
Y0Q C19 C22  DOUB Y N 20 
Y0Q C20 C21  DOUB Y N 21 
Y0Q C21 C22  SING Y N 22 
Y0Q C21 N25  SING Y N 23 
Y0Q C22 N23  SING Y N 24 
Y0Q N23 N24  SING Y N 25 
Y0Q N24 N25  DOUB Y N 26 
Y0Q C26 C27  SING N N 27 
Y0Q C26 O28  DOUB N N 28 
Y0Q C27 C29  DOUB Y N 29 
Y0Q C27 N31  SING Y N 30 
Y0Q C29 C30  SING Y N 31 
Y0Q C30 C33  DOUB Y N 32 
Y0Q C30 O34  SING N N 33 
Y0Q N31 C32  DOUB Y N 34 
Y0Q C32 C33  SING Y N 35 
Y0Q C33 CL37 SING N N 36 
Y0Q O34 C35  SING N N 37 
Y0Q C35 C36  SING N N 38 
Y0Q C36 C38  SING N N 39 
Y0Q C36 C39  SING N N 40 
Y0Q C38 C39  SING N N 41 
Y0Q C10 H47  SING N N 42 
Y0Q C10 H46  SING N N 43 
Y0Q C18 H48  SING N N 44 
Y0Q C19 H49  SING N N 45 
Y0Q C20 H50  SING N N 46 
Y0Q C2  H40  SING N N 47 
Y0Q C2  H41  SING N N 48 
Y0Q C3  H12  SING N N 49 
Y0Q C4  H11  SING N N 50 
Y0Q C5  H42  SING N N 51 
Y0Q C5  H43  SING N N 52 
Y0Q C6  H14  SING N N 53 
Y0Q C7  H13  SING N N 54 
Y0Q C8  H44  SING N N 55 
Y0Q C8  H45  SING N N 56 
Y0Q N23 H51  SING N N 57 
Y0Q C29 H52  SING N N 58 
Y0Q C32 H53  SING N N 59 
Y0Q C35 H54  SING N N 60 
Y0Q C35 H55  SING N N 61 
Y0Q C36 H56  SING N N 62 
Y0Q C38 H58  SING N N 63 
Y0Q C38 H57  SING N N 64 
Y0Q C39 H59  SING N N 65 
Y0Q C39 H60  SING N N 66 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
Y0Q SMILES           ACDLabs              12.01 "Clc1cnc(cc1OCC1CC1)C(=O)N1CC2C3CN(CC3C2C1)C(=O)c1cc2nn[NH]c2cc1"                                                                                                                    
Y0Q InChI            InChI                1.06  "InChI=1S/C25H25ClN6O3/c26-19-7-27-22(6-23(19)35-12-13-1-2-13)25(34)32-10-17-15-8-31(9-16(15)18(17)11-32)24(33)14-3-4-20-21(5-14)29-30-28-20/h3-7,13,15-18H,1-2,8-12H2,(H,28,29,30)" 
Y0Q InChIKey         InChI                1.06  ZWVQJXMQLPTWPF-UHFFFAOYSA-N                                                                                                                                                          
Y0Q SMILES_CANONICAL CACTVS               3.385 "Clc1cnc(cc1OCC2CC2)C(=O)N3C[C@H]4[C@@H]5CN(C[C@@H]5[C@H]4C3)C(=O)c6ccc7[nH]nnc7c6"                                                                                                  
Y0Q SMILES           CACTVS               3.385 "Clc1cnc(cc1OCC2CC2)C(=O)N3C[CH]4[CH]5CN(C[CH]5[CH]4C3)C(=O)c6ccc7[nH]nnc7c6"                                                                                                        
Y0Q SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc2c(cc1C(=O)N3C[C@@H]4[C@H](C3)[C@@H]5[C@H]4CN(C5)C(=O)c6cc(c(cn6)Cl)OCC7CC7)nn[nH]2"                                                                                            
Y0Q SMILES           "OpenEye OEToolkits" 2.0.7 "c1cc2c(cc1C(=O)N3CC4C(C3)C5C4CN(C5)C(=O)c6cc(c(cn6)Cl)OCC7CC7)nn[nH]2"                                                                                                              
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
Y0Q "SYSTEMATIC NAME" ACDLabs              12.01 "[(3aR,3bR,6aR,6bS)-5-(1H-benzotriazole-5-carbonyl)octahydrocyclobuta[1,2-c:3,4-c']dipyrrol-2(1H)-yl][5-chloro-4-(cyclopropylmethoxy)pyridin-2-yl]methanone"         
Y0Q "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "1~{H}-benzotriazol-5-yl-[(1~{S},2~{R},6~{S},7~{R})-9-[5-chloranyl-4-(cyclopropylmethoxy)pyridin-2-yl]carbonyl-4,9-diazatricyclo[5.3.0.0^{2,6}]decan-4-yl]methanone" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
Y0Q "Create component" 2023-06-09 RCSB 
Y0Q "Initial release"  2024-12-18 RCSB 
# 
