data_Y6I
# 
_chem_comp.id                                    Y6I 
_chem_comp.name                                  "[3-fluoro-4-(trifluoromethoxy)phenyl]methyl (9R)-2-(1,4,6,7-tetrahydro-5H-[1,2,3]triazolo[4,5-c]pyridine-5-carbonyl)-4,5,7,8-tetrahydro-6H-pyrazolo[1,5-d][1,4]diazepine-6-carboxylate" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C22 H21 F4 N7 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-06-12 
_chem_comp.pdbx_modified_date                    2024-12-13 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        523.440 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     Y6I 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7G5T 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
Y6I C11 C1  C 0 1 N N N N N N -11.256 13.150 51.830 5.756  0.433  -1.622 C11 Y6I 1  
Y6I C15 C2  C 0 1 N N N N N N -8.378  10.983 53.159 8.540  -1.451 -0.788 C15 Y6I 2  
Y6I C16 C3  C 0 1 N N N N N N -8.982  13.989 52.912 5.558  -1.513 -0.139 C16 Y6I 3  
Y6I C17 C4  C 0 1 Y N N N N N -7.700  13.387 53.500 6.635  -2.033 0.779  C17 Y6I 4  
Y6I C18 C5  C 0 1 Y N N N N N -7.436  12.006 53.609 7.958  -2.006 0.484  C18 Y6I 5  
Y6I C22 C6  C 0 1 N N N N N N -14.944 7.966  47.242 -1.402 2.782  0.742  C22 Y6I 6  
Y6I C25 C7  C 0 1 N N N N N N -14.471 5.876  46.065 -3.753 2.381  0.819  C25 Y6I 7  
Y6I C26 C8  C 0 1 Y N N N N N -13.440 5.271  45.103 -4.731 1.246  0.650  C26 Y6I 8  
Y6I C27 C9  C 0 1 Y N N N N N -13.036 5.975  43.959 -5.099 0.484  1.744  C27 Y6I 9  
Y6I C28 C10 C 0 1 Y N N N N N -12.100 5.373  43.096 -5.996 -0.558 1.591  C28 Y6I 10 
Y6I C1  C11 C 0 1 N N N N N N -15.394 10.242 48.353 0.191  0.993  0.263  C1  Y6I 11 
Y6I C2  C12 C 0 1 N N N N N N -14.969 10.293 49.855 1.541  0.645  0.892  C2  Y6I 12 
Y6I N3  N1  N 0 1 N N N N N N -14.529 9.284  47.576 -0.124 2.390  0.574  N3  Y6I 13 
Y6I C4  C13 C 0 1 N N N N N N -13.193 9.735  47.176 0.976  3.357  0.699  C4  Y6I 14 
Y6I C5  C14 C 0 1 N N N N N N -12.206 9.556  48.325 1.762  3.370  -0.616 C5  Y6I 15 
Y6I N6  N2  N 0 1 Y N N N N N -13.602 10.876 50.079 2.630  1.035  -0.012 N6  Y6I 16 
Y6I C7  C15 C 0 1 Y N N N N N -12.396 10.547 49.411 2.743  2.227  -0.640 C7  Y6I 17 
Y6I C8  C16 C 0 1 Y N N N N N -11.398 11.355 49.972 3.916  2.219  -1.316 C8  Y6I 18 
Y6I C9  C17 C 0 1 Y N N N N N -12.015 12.153 50.987 4.476  0.941  -1.087 C9  Y6I 19 
Y6I N10 N3  N 0 1 Y N N N N N -13.372 11.853 51.047 3.639  0.289  -0.308 N10 Y6I 20 
Y6I N12 N4  N 0 1 N N N N N N -9.902  12.906 52.339 6.229  -0.762 -1.216 N12 Y6I 21 
Y6I O13 O1  O 0 1 N N N N N N -11.842 14.208 52.090 6.381  1.091  -2.430 O13 Y6I 22 
Y6I C14 C18 C 0 1 N N N N N N -9.179  11.628 51.982 7.425  -1.348 -1.838 C14 Y6I 23 
Y6I N19 N5  N 0 1 Y N N N N N -6.175  11.890 54.190 8.591  -2.557 1.535  N19 Y6I 24 
Y6I N20 N6  N 0 1 Y N N N N N -5.700  13.149 54.421 7.700  -2.890 2.408  N20 Y6I 25 
Y6I N21 N7  N 0 1 Y N N N N N -6.577  14.040 54.027 6.521  -2.587 1.981  N21 Y6I 26 
Y6I O23 O2  O 0 1 N N N N N N -16.039 7.501  47.580 -1.653 3.943  1.000  O23 Y6I 27 
Y6I O24 O3  O 0 1 N N N N N N -14.028 7.186  46.487 -2.402 1.888  0.625  O24 Y6I 28 
Y6I C29 C19 C 0 1 Y N N N N N -11.585 4.110  43.361 -6.527 -0.837 0.338  C29 Y6I 29 
Y6I C30 C20 C 0 1 Y N N N N N -11.980 3.384  44.504 -6.155 -0.070 -0.756 C30 Y6I 30 
Y6I C31 C21 C 0 1 Y N N N N N -12.916 3.980  45.373 -5.262 0.973  -0.596 C31 Y6I 31 
Y6I O32 O4  O 0 1 N N N N N N -10.677 3.688  42.411 -7.408 -1.861 0.184  O32 Y6I 32 
Y6I C33 C22 C 0 1 N N N N N N -10.619 2.350  42.032 -7.913 -2.090 -1.133 C33 Y6I 33 
Y6I F34 F1  F 0 1 N N N N N N -10.091 1.684  43.051 -6.850 -2.376 -1.997 F34 Y6I 34 
Y6I F35 F2  F 0 1 N N N N N N -11.819 1.847  41.788 -8.800 -3.171 -1.111 F35 Y6I 35 
Y6I F36 F3  F 0 1 N N N N N N -9.939  2.144  40.923 -8.583 -0.946 -1.581 F36 Y6I 36 
Y6I F37 F4  F 0 1 N N N N N N -11.684 5.992  42.000 -6.355 -1.304 2.659  F37 Y6I 37 
Y6I H49 H1  H 0 1 N N N N N N -9.058  10.703 53.977 8.956  -0.461 -0.599 H49 Y6I 38 
Y6I H50 H2  H 0 1 N N N N N N -7.837  10.091 52.810 9.326  -2.115 -1.150 H50 Y6I 39 
Y6I H52 H3  H 0 1 N N N N N N -8.711  14.690 52.108 4.996  -2.346 -0.561 H52 Y6I 40 
Y6I H51 H4  H 0 1 N N N N N N -9.519  14.530 53.705 4.886  -0.855 0.412  H51 Y6I 41 
Y6I H54 H5  H 0 1 N N N N N N -14.578 5.224  46.945 -3.967 3.156  0.083  H54 Y6I 42 
Y6I H55 H6  H 0 1 N N N N N N -15.441 5.964  45.554 -3.848 2.796  1.822  H55 Y6I 43 
Y6I H56 H7  H 0 1 N N N N N N -13.434 6.956  43.745 -4.685 0.702  2.717  H56 Y6I 44 
Y6I H38 H8  H 0 1 N N N N N N -16.442 9.914  48.287 0.247  0.863  -0.818 H38 Y6I 45 
Y6I H39 H9  H 0 1 N N N N N N -15.297 11.248 47.918 -0.582 0.344  0.673  H39 Y6I 46 
Y6I H40 H10 H 0 1 N N N N N N -15.701 10.905 50.402 1.648  1.177  1.838  H40 Y6I 47 
Y6I H41 H11 H 0 1 N N N N N N -14.978 9.268  50.253 1.590  -0.429 1.074  H41 Y6I 48 
Y6I H43 H12 H 0 1 N N N N N N -12.855 9.144  46.312 0.571  4.350  0.893  H43 Y6I 49 
Y6I H42 H13 H 0 1 N N N N N N -13.237 10.798 46.898 1.634  3.060  1.516  H42 Y6I 50 
Y6I H44 H14 H 0 1 N N N N N N -12.335 8.547  48.744 1.069  3.270  -1.452 H44 Y6I 51 
Y6I H45 H15 H 0 1 N N N N N N -11.185 9.661  47.930 2.302  4.312  -0.706 H45 Y6I 52 
Y6I H46 H16 H 0 1 N N N N N N -10.356 11.372 49.690 4.335  3.020  -1.907 H46 Y6I 53 
Y6I H47 H17 H 0 1 N N N N N N -9.924  10.898 51.634 7.756  -0.714 -2.660 H47 Y6I 54 
Y6I H48 H18 H 0 1 N N N N N N -8.474  11.849 51.167 7.189  -2.343 -2.217 H48 Y6I 55 
Y6I H53 H19 H 0 1 N N N N N N -5.701  11.035 54.401 9.549  -2.684 1.621  H53 Y6I 56 
Y6I H57 H20 H 0 1 N N N N N N -11.578 2.402  44.707 -6.566 -0.285 -1.731 H57 Y6I 57 
Y6I H58 H21 H 0 1 N N N N N N -13.239 3.448  46.256 -4.977 1.573  -1.448 H58 Y6I 58 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
Y6I C1  C2  SING N N 1  
Y6I C1  N3  SING N N 2  
Y6I C2  N6  SING N N 3  
Y6I N3  C4  SING N N 4  
Y6I N3  C22 SING N N 5  
Y6I C4  C5  SING N N 6  
Y6I C5  C7  SING N N 7  
Y6I N6  C7  SING Y N 8  
Y6I N6  N10 SING Y N 9  
Y6I C7  C8  DOUB Y N 10 
Y6I C8  C9  SING Y N 11 
Y6I C9  N10 DOUB Y N 12 
Y6I C9  C11 SING N N 13 
Y6I C11 N12 SING N N 14 
Y6I C11 O13 DOUB N N 15 
Y6I N12 C14 SING N N 16 
Y6I N12 C16 SING N N 17 
Y6I C14 C15 SING N N 18 
Y6I C15 C18 SING N N 19 
Y6I C16 C17 SING N N 20 
Y6I C17 C18 DOUB Y N 21 
Y6I C17 N21 SING Y N 22 
Y6I C18 N19 SING Y N 23 
Y6I N19 N20 SING Y N 24 
Y6I N20 N21 DOUB Y N 25 
Y6I C22 O23 DOUB N N 26 
Y6I C22 O24 SING N N 27 
Y6I O24 C25 SING N N 28 
Y6I C25 C26 SING N N 29 
Y6I C26 C27 DOUB Y N 30 
Y6I C26 C31 SING Y N 31 
Y6I C27 C28 SING Y N 32 
Y6I C28 C29 DOUB Y N 33 
Y6I C28 F37 SING N N 34 
Y6I C29 C30 SING Y N 35 
Y6I C29 O32 SING N N 36 
Y6I C30 C31 DOUB Y N 37 
Y6I O32 C33 SING N N 38 
Y6I C33 F34 SING N N 39 
Y6I C33 F35 SING N N 40 
Y6I C33 F36 SING N N 41 
Y6I C15 H49 SING N N 42 
Y6I C15 H50 SING N N 43 
Y6I C16 H52 SING N N 44 
Y6I C16 H51 SING N N 45 
Y6I C25 H54 SING N N 46 
Y6I C25 H55 SING N N 47 
Y6I C27 H56 SING N N 48 
Y6I C1  H38 SING N N 49 
Y6I C1  H39 SING N N 50 
Y6I C2  H40 SING N N 51 
Y6I C2  H41 SING N N 52 
Y6I C4  H43 SING N N 53 
Y6I C4  H42 SING N N 54 
Y6I C5  H44 SING N N 55 
Y6I C5  H45 SING N N 56 
Y6I C8  H46 SING N N 57 
Y6I C14 H47 SING N N 58 
Y6I C14 H48 SING N N 59 
Y6I N19 H53 SING N N 60 
Y6I C30 H57 SING N N 61 
Y6I C31 H58 SING N N 62 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
Y6I SMILES           ACDLabs              12.01 "FC(F)(F)Oc1ccc(cc1F)COC(=O)N1CCc2cc(nn2CC1)C(=O)N1CCc2[NH]nnc2C1"                                                                                                                
Y6I InChI            InChI                1.06  "InChI=1S/C22H21F4N7O4/c23-15-9-13(1-2-19(15)37-22(24,25)26)12-36-21(35)31-5-3-14-10-17(29-33(14)8-7-31)20(34)32-6-4-16-18(11-32)28-30-27-16/h1-2,9-10H,3-8,11-12H2,(H,27,28,30)" 
Y6I InChIKey         InChI                1.06  VKVXAFZJLAELDA-UHFFFAOYSA-N                                                                                                                                                       
Y6I SMILES_CANONICAL CACTVS               3.385 "Fc1cc(COC(=O)N2CCn3nc(cc3CC2)C(=O)N4CCc5[nH]nnc5C4)ccc1OC(F)(F)F"                                                                                                                
Y6I SMILES           CACTVS               3.385 "Fc1cc(COC(=O)N2CCn3nc(cc3CC2)C(=O)N4CCc5[nH]nnc5C4)ccc1OC(F)(F)F"                                                                                                                
Y6I SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1COC(=O)N2CCc3cc(nn3CC2)C(=O)N4CCc5c(nn[nH]5)C4)F)OC(F)(F)F"                                                                                                            
Y6I SMILES           "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1COC(=O)N2CCc3cc(nn3CC2)C(=O)N4CCc5c(nn[nH]5)C4)F)OC(F)(F)F"                                                                                                            
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
Y6I "SYSTEMATIC NAME" ACDLabs              12.01 "[3-fluoro-4-(trifluoromethoxy)phenyl]methyl (9R)-2-(1,4,6,7-tetrahydro-5H-[1,2,3]triazolo[4,5-c]pyridine-5-carbonyl)-4,5,7,8-tetrahydro-6H-pyrazolo[1,5-d][1,4]diazepine-6-carboxylate" 
Y6I "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[3-fluoranyl-4-(trifluoromethyloxy)phenyl]methyl 2-(1,4,6,7-tetrahydro-[1,2,3]triazolo[4,5-c]pyridin-5-ylcarbonyl)-4,5,7,8-tetrahydropyrazolo[1,5-d][1,4]diazepine-6-carboxylate"       
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
Y6I "Create component" 2023-06-12 RCSB 
Y6I "Initial release"  2024-12-18 RCSB 
# 
