data_Y9O
# 
_chem_comp.id                                    Y9O 
_chem_comp.name                                  "5-({[(1M)-5-chloro-4-methyl-3'-(morpholine-4-carbonyl)[1,1'-biphenyl]-2-yl]oxy}methyl)-4-methyl-2,4-dihydro-3H-1,2,4-triazol-3-one" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C22 H23 Cl N4 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-06-12 
_chem_comp.pdbx_modified_date                    2024-12-13 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        442.895 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     Y9O 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7G5Y 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
Y9O C11  C1  C  0 1 N N N N N N -13.862 7.003  46.452 3.726  -0.013 0.074  C11  Y9O 1  
Y9O C13  C2  C  0 1 Y N N N N N -11.545 9.428  43.945 -0.176 -0.709 -1.337 C13  Y9O 2  
Y9O C15  C3  C  0 1 Y N N N N N -12.681 10.500 41.643 -2.443 -1.005 0.239  C15  Y9O 3  
Y9O C16  C4  C  0 1 Y N N N N N -11.505 10.815 43.751 -0.981 -1.821 -1.489 C16  Y9O 4  
Y9O C17  C5  C  0 1 Y N N N N N -12.753 9.102  41.815 -1.628 0.113  0.404  C17  Y9O 5  
Y9O C20  C6  C  0 1 N N N N N N -14.555 9.950  48.651 5.434  -3.256 0.101  C20  Y9O 6  
Y9O C22  C7  C  0 1 N N N N N N -12.211 9.452  47.854 6.633  -1.073 0.369  C22  Y9O 7  
Y9O C24  C8  C  0 1 N N N N N N -13.208 11.121 40.426 -3.649 -1.173 1.078  C24  Y9O 8  
Y9O C27  C9  C  0 1 N N N N N N -14.765 12.540 41.803 -4.922 -1.763 -0.936 C27  Y9O 9  
Y9O C28  C10 C  0 1 N N N N N N -14.798 14.047 41.936 -6.065 -0.919 -1.512 C28  Y9O 10 
Y9O C1   C11 C  0 1 Y N N N N N -11.544 6.221  42.351 -0.187 2.732  -0.223 C1   Y9O 11 
Y9O C2   C12 C  0 1 Y N N N N N -11.522 4.858  42.663 0.624  3.840  -0.072 C2   Y9O 12 
Y9O C3   C13 C  0 1 Y N N N N N -12.091 4.328  43.811 1.993  3.686  0.075  C3   Y9O 13 
Y9O C4   C14 C  0 1 Y N N N N N -12.683 5.204  44.703 2.557  2.424  0.072  C4   Y9O 14 
Y9O C5   C15 C  0 1 Y N N N N N -12.730 6.577  44.419 1.754  1.305  -0.079 C5   Y9O 15 
Y9O C6   C16 C  0 1 Y N N N N N -12.189 7.114  43.230 0.372  1.457  -0.228 C6   Y9O 16 
Y9O C7   C17 C  0 1 Y N N N N N -12.179 8.551  42.955 -0.495 0.264  -0.389 C7   Y9O 17 
Y9O O8   O1  O  0 1 N N N N N N -13.291 7.502  45.240 2.308  0.064  -0.082 O8   Y9O 18 
Y9O C9   C18 C  0 1 N N N N N N -12.042 2.864  44.139 2.871  4.900  0.238  C9   Y9O 19 
Y9O CL10 CL1 CL 0 0 N N N N N N -10.742 3.776  41.577 -0.073 5.429  -0.067 CL10 Y9O 20 
Y9O C12  C19 C  0 1 N N N N N N -14.390 8.119  47.308 4.156  -1.457 0.046  C12  Y9O 21 
Y9O C14  C20 C  0 1 Y N N N N N -12.070 11.351 42.585 -2.109 -1.974 -0.709 C14  Y9O 22 
Y9O N18  N1  N  0 1 N N N N N N -15.662 8.215  47.624 3.369  -2.474 -0.098 N18  Y9O 23 
Y9O N19  N2  N  0 1 N N N N N N -15.770 9.310  48.418 4.151  -3.638 -0.071 N19  Y9O 24 
Y9O N21  N3  N  0 1 N N N N N N -13.649 9.178  47.914 5.446  -1.910 0.178  N21  Y9O 25 
Y9O O23  O2  O  0 1 N N N N N N -14.342 10.948 49.324 6.401  -3.991 0.178  O23  Y9O 26 
Y9O O25  O3  O  0 1 N N N N N N -12.761 10.733 39.344 -3.578 -1.021 2.282  O25  Y9O 27 
Y9O N26  N4  N  0 1 N N N N N N -14.166 12.172 40.499 -4.828 -1.493 0.508  N26  Y9O 28 
Y9O O29  O4  O  0 1 N N N N N N -15.405 14.661 40.795 -7.250 -1.145 -0.745 O29  Y9O 29 
Y9O C30  C21 C  0 1 N N N N N N -14.637 14.399 39.615 -7.145 -0.749 0.625  C30  Y9O 30 
Y9O C31  C22 C  0 1 N N N N N N -14.602 12.929 39.301 -6.058 -1.585 1.310  C31  Y9O 31 
Y9O H38  H1  H  0 1 N N N N N N -14.688 6.320  46.204 4.211  0.527  -0.739 H38  Y9O 32 
Y9O H37  H2  H  0 1 N N N N N N -13.090 6.456  47.013 4.011  0.432  1.028  H37  Y9O 33 
Y9O H39  H3  H  0 1 N N N N N N -11.104 9.000  44.833 0.706  -0.594 -1.950 H39  Y9O 34 
Y9O H41  H4  H  0 1 N N N N N N -11.047 11.460 44.486 -0.727 -2.572 -2.221 H41  Y9O 35 
Y9O H42  H5  H  0 1 N N N N N N -13.240 8.477  41.081 -1.874 0.859  1.145  H42  Y9O 36 
Y9O H44  H6  H  0 1 N N N N N N -11.984 10.354 48.441 7.517  -1.707 0.442  H44  Y9O 37 
Y9O H46  H7  H  0 1 N N N N N N -11.657 8.597  48.268 6.741  -0.395 -0.478 H46  Y9O 38 
Y9O H45  H8  H  0 1 N N N N N N -11.911 9.610  46.808 6.525  -0.493 1.286  H45  Y9O 39 
Y9O H48  H9  H  0 1 N N N N N N -15.790 12.144 41.860 -5.128 -2.820 -1.099 H48  Y9O 40 
Y9O H47  H10 H  0 1 N N N N N N -14.161 12.113 42.617 -3.985 -1.492 -1.422 H47  Y9O 41 
Y9O H49  H11 H  0 1 N N N N N N -15.374 14.314 42.834 -5.797 0.137  -1.465 H49  Y9O 42 
Y9O H50  H12 H  0 1 N N N N N N -13.768 14.420 42.037 -6.242 -1.204 -2.548 H50  Y9O 43 
Y9O H32  H13 H  0 1 N N N N N N -11.073 6.584  41.449 -1.254 2.855  -0.334 H32  Y9O 44 
Y9O H33  H14 H  0 1 N N N N N N -13.111 4.830  45.621 3.625  2.311  0.187  H33  Y9O 45 
Y9O H34  H15 H  0 1 N N N N N N -11.127 2.646  44.708 2.967  5.139  1.297  H34  Y9O 46 
Y9O H35  H16 H  0 1 N N N N N N -12.922 2.594  44.742 3.857  4.694  -0.179 H35  Y9O 47 
Y9O H36  H17 H  0 1 N N N N N N -12.042 2.279  43.207 2.424  5.745  -0.286 H36  Y9O 48 
Y9O H40  H18 H  0 1 N N N N N N -12.037 12.416 42.409 -2.740 -2.842 -0.838 H40  Y9O 49 
Y9O H43  H19 H  0 1 N N N N N N -16.638 9.627  48.799 3.830  -4.549 -0.160 H43  Y9O 50 
Y9O H52  H20 H  0 1 N N N N N N -15.088 14.936 38.767 -6.881 0.307  0.680  H52  Y9O 51 
Y9O H51  H21 H  0 1 N N N N N N -13.608 14.757 39.770 -8.099 -0.914 1.125  H51  Y9O 52 
Y9O H54  H22 H  0 1 N N N N N N -13.896 12.748 38.477 -6.378 -2.625 1.373  H54  Y9O 53 
Y9O H53  H23 H  0 1 N N N N N N -15.607 12.595 39.003 -5.872 -1.196 2.312  H53  Y9O 54 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
Y9O C1  C2   DOUB Y N 1  
Y9O C1  C6   SING Y N 2  
Y9O C2  C3   SING Y N 3  
Y9O C2  CL10 SING N N 4  
Y9O C3  C4   DOUB Y N 5  
Y9O C3  C9   SING N N 6  
Y9O C4  C5   SING Y N 7  
Y9O C5  C6   DOUB Y N 8  
Y9O C5  O8   SING N N 9  
Y9O C6  C7   SING N N 10 
Y9O C7  C13  DOUB Y N 11 
Y9O C7  C17  SING Y N 12 
Y9O O8  C11  SING N N 13 
Y9O C11 C12  SING N N 14 
Y9O C12 N18  DOUB N N 15 
Y9O C12 N21  SING N N 16 
Y9O C13 C16  SING Y N 17 
Y9O C14 C15  SING Y N 18 
Y9O C14 C16  DOUB Y N 19 
Y9O C15 C17  DOUB Y N 20 
Y9O C15 C24  SING N N 21 
Y9O N18 N19  SING N N 22 
Y9O N19 C20  SING N N 23 
Y9O C20 N21  SING N N 24 
Y9O C20 O23  DOUB N N 25 
Y9O N21 C22  SING N N 26 
Y9O C24 O25  DOUB N N 27 
Y9O C24 N26  SING N N 28 
Y9O N26 C27  SING N N 29 
Y9O N26 C31  SING N N 30 
Y9O C27 C28  SING N N 31 
Y9O C28 O29  SING N N 32 
Y9O O29 C30  SING N N 33 
Y9O C30 C31  SING N N 34 
Y9O C11 H38  SING N N 35 
Y9O C11 H37  SING N N 36 
Y9O C13 H39  SING N N 37 
Y9O C16 H41  SING N N 38 
Y9O C17 H42  SING N N 39 
Y9O C22 H44  SING N N 40 
Y9O C22 H46  SING N N 41 
Y9O C22 H45  SING N N 42 
Y9O C27 H48  SING N N 43 
Y9O C27 H47  SING N N 44 
Y9O C28 H49  SING N N 45 
Y9O C28 H50  SING N N 46 
Y9O C1  H32  SING N N 47 
Y9O C4  H33  SING N N 48 
Y9O C9  H34  SING N N 49 
Y9O C9  H35  SING N N 50 
Y9O C9  H36  SING N N 51 
Y9O C14 H40  SING N N 52 
Y9O N19 H43  SING N N 53 
Y9O C30 H52  SING N N 54 
Y9O C30 H51  SING N N 55 
Y9O C31 H54  SING N N 56 
Y9O C31 H53  SING N N 57 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
Y9O SMILES           ACDLabs              12.01 "O=C(c1cccc(c1)c1cc(Cl)c(C)cc1OCC1=NNC(=O)N1C)N1CCOCC1"                                                                                                       
Y9O InChI            InChI                1.06  "InChI=1S/C22H23ClN4O4/c1-14-10-19(31-13-20-24-25-22(29)26(20)2)17(12-18(14)23)15-4-3-5-16(11-15)21(28)27-6-8-30-9-7-27/h3-5,10-12H,6-9,13H2,1-2H3,(H,25,29)" 
Y9O InChIKey         InChI                1.06  FUMNXHJNCMFWAW-UHFFFAOYSA-N                                                                                                                                   
Y9O SMILES_CANONICAL CACTVS               3.385 "CN1C(=O)NN=C1COc2cc(C)c(Cl)cc2c3cccc(c3)C(=O)N4CCOCC4"                                                                                                       
Y9O SMILES           CACTVS               3.385 "CN1C(=O)NN=C1COc2cc(C)c(Cl)cc2c3cccc(c3)C(=O)N4CCOCC4"                                                                                                       
Y9O SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cc(c(cc1Cl)c2cccc(c2)C(=O)N3CCOCC3)OCC4=NNC(=O)N4C"                                                                                                       
Y9O SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1cc(c(cc1Cl)c2cccc(c2)C(=O)N3CCOCC3)OCC4=NNC(=O)N4C"                                                                                                       
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
Y9O "SYSTEMATIC NAME" ACDLabs              12.01 "5-({[(1M)-5-chloro-4-methyl-3'-(morpholine-4-carbonyl)[1,1'-biphenyl]-2-yl]oxy}methyl)-4-methyl-2,4-dihydro-3H-1,2,4-triazol-3-one" 
Y9O "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "3-[[4-chloranyl-5-methyl-2-(3-morpholin-4-ylcarbonylphenyl)phenoxy]methyl]-4-methyl-1~{H}-1,2,4-triazol-5-one"                      
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
Y9O "Create component" 2023-06-12 RCSB 
Y9O "Initial release"  2024-12-18 RCSB 
# 
