data_YO2
# 
_chem_comp.id                                    YO2 
_chem_comp.name                                  "[(3aR,3bS,6aR,6bS)-5-(1H-benzotriazole-5-carbonyl)octahydrocyclobuta[1,2-c:3,4-c']dipyrrol-2(1H)-yl]{1-ethyl-4-[(propan-2-yl)oxy]-1H-indol-6-yl}methanone" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C29 H32 N6 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-06-19 
_chem_comp.pdbx_modified_date                    2024-12-13 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        512.603 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YO2 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7G4C 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YO2 C10 C1  C 0 1 N N N N N N -10.486 12.653 49.385 3.088  -0.286 0.116  C10 YO2 1  
YO2 C15 C2  C 0 1 N N N N N N -14.482 9.013  46.728 -2.641 -0.966 -1.665 C15 YO2 2  
YO2 C17 C3  C 0 1 N N N N N N -10.905 13.962 51.623 4.871  -2.036 0.229  C17 YO2 3  
YO2 C18 C4  C 0 1 Y N N N N N -9.564  13.624 52.254 5.918  -1.012 0.424  C18 YO2 4  
YO2 C20 C5  C 0 1 Y N N N N N -9.539  12.341 52.734 7.096  -1.340 1.111  C20 YO2 5  
YO2 C21 C6  C 0 1 Y N N N N N -8.381  11.829 53.306 8.069  -0.404 1.298  C21 YO2 6  
YO2 C22 C7  C 0 1 Y N N N N N -8.454  14.585 52.310 5.734  0.270  -0.079 C22 YO2 7  
YO2 C23 C8  C 0 1 Y N N N N N -7.233  14.004 52.939 6.728  1.234  0.109  C23 YO2 8  
YO2 C24 C9  C 0 1 Y N N N N N -7.290  12.643 53.367 7.901  0.888  0.806  C24 YO2 9  
YO2 C28 C10 C 0 1 Y N N N N N -13.712 8.351  45.578 -3.630 -0.248 -0.837 C28 YO2 10 
YO2 N1  N1  N 0 1 N N N N N N -13.812 9.768  47.726 -1.332 -0.659 -1.569 N1  YO2 11 
YO2 C2  C11 C 0 1 N N N N N N -14.542 10.482 48.844 -0.267 -1.210 -2.416 C2  YO2 12 
YO2 C3  C12 C 0 1 N N S N N N -13.433 11.318 49.539 1.060  -0.956 -1.680 C3  YO2 13 
YO2 C4  C13 C 0 1 N N R N N N -12.066 10.653 49.115 0.772  0.303  -0.826 C4  YO2 14 
YO2 C5  C14 C 0 1 N N N N N N -12.390 9.601  48.043 -0.749 0.277  -0.603 C5  YO2 15 
YO2 C6  C15 C 0 1 N N S N N N -12.941 12.643 48.858 1.194  -1.728 -0.361 C6  YO2 16 
YO2 C7  C16 C 0 1 N N R N N N -11.551 11.959 48.519 1.562  -0.379 0.304  C7  YO2 17 
YO2 C8  C17 C 0 1 N N N N N N -12.635 13.821 49.768 2.477  -2.570 -0.259 C8  YO2 18 
YO2 N9  N2  N 0 1 N N N N N N -11.285 13.470 50.340 3.589  -1.663 0.045  N9  YO2 19 
YO2 O16 O1  O 0 1 N N N N N N -15.713 8.890  46.771 -3.007 -1.834 -2.434 O16 YO2 20 
YO2 O19 O2  O 0 1 N N N N N N -11.711 14.619 52.298 5.166  -3.216 0.235  O19 YO2 21 
YO2 N25 N3  N 0 1 Y N N N N N -6.036  12.334 53.833 8.675  2.021  0.832  N25 YO2 22 
YO2 N26 N4  N 0 1 Y N N N N N -5.221  13.403 53.773 7.954  3.018  0.160  N26 YO2 23 
YO2 N27 N5  N 0 1 Y N N N N N -5.925  14.442 53.244 6.836  2.534  -0.254 N27 YO2 24 
YO2 C29 C18 C 0 1 Y N N N N N -13.671 6.998  45.484 -3.520 1.129  -0.666 C29 YO2 25 
YO2 C30 C19 C 0 1 Y N N N N N -13.042 9.207  44.593 -4.678 -0.957 -0.232 C30 YO2 26 
YO2 C31 C20 C 0 1 Y N N N N N -12.324 8.598  43.507 -5.599 -0.302 0.537  C31 YO2 27 
YO2 O32 O3  O 0 1 N N N N N N -11.786 9.206  42.408 -6.613 -0.994 1.121  O32 YO2 28 
YO2 C33 C21 C 0 1 N N N N N N -12.063 10.581 42.295 -6.610 -2.413 0.954  C33 YO2 29 
YO2 C34 C22 C 0 1 Y N N N N N -12.254 7.212  43.406 -5.497 1.085  0.721  C34 YO2 30 
YO2 C35 C23 C 0 1 Y N N N N N -12.943 6.427  44.407 -4.451 1.804  0.113  C35 YO2 31 
YO2 N36 N6  N 0 1 Y N N N N N -12.767 5.077  44.113 -4.609 3.127  0.463  N36 YO2 32 
YO2 C37 C24 C 0 1 Y N N N N N -11.945 5.001  42.936 -5.707 3.266  1.264  C37 YO2 33 
YO2 C38 C25 C 0 1 Y N N N N N -11.624 6.305  42.487 -6.287 2.069  1.459  C38 YO2 34 
YO2 C39 C26 C 0 1 N N N N N N -10.688 11.079 42.663 -5.868 -3.063 2.123  C39 YO2 35 
YO2 C40 C27 C 0 1 N N N N N N -12.520 10.910 40.848 -8.052 -2.924 0.918  C40 YO2 36 
YO2 C41 C28 C 0 1 N N N N N N -13.414 3.943  44.920 -3.730 4.220  0.041  C41 YO2 37 
YO2 C42 C29 C 0 1 N N N N N N -12.903 2.515  44.582 -4.174 4.729  -1.332 C42 YO2 38 
YO2 H49 H1  H 0 1 N N N N N N -9.872  11.913 49.920 3.319  0.244  -0.808 H49 YO2 39 
YO2 H50 H2  H 0 1 N N N N N N -9.836  13.293 48.770 3.537  0.231  0.964  H50 YO2 40 
YO2 H51 H3  H 0 1 N N N N N N -10.423 11.725 52.667 7.232  -2.340 1.494  H51 YO2 41 
YO2 H52 H4  H 0 1 N N N N N N -8.347  10.820 53.689 8.973  -0.665 1.828  H52 YO2 42 
YO2 H53 H5  H 0 1 N N N N N N -8.515  15.597 51.938 4.828  0.520  -0.612 H53 YO2 43 
YO2 H44 H6  H 0 1 N N N N N N -15.331 11.135 48.442 -0.418 -2.280 -2.554 H44 YO2 44 
YO2 H43 H7  H 0 1 N N N N N N -14.986 9.760  49.545 -0.260 -0.706 -3.382 H43 YO2 45 
YO2 H12 H8  H 0 1 N N N N N N -13.558 11.404 50.628 1.942  -0.921 -2.319 H12 YO2 46 
YO2 H11 H9  H 0 1 N N N N N N -11.477 10.272 49.962 1.167  1.247  -1.201 H11 YO2 47 
YO2 H45 H10 H 0 1 N N N N N N -12.202 8.589  48.432 -1.162 1.274  -0.761 H45 YO2 48 
YO2 H46 H11 H 0 1 N N N N N N -11.777 9.769  47.146 -0.968 -0.056 0.411  H46 YO2 49 
YO2 H14 H12 H 0 1 N N N N N N -13.518 12.909 47.960 0.287  -2.213 -0.001 H14 YO2 50 
YO2 H13 H13 H 0 1 N N N N N N -11.320 11.922 47.444 1.205  -0.202 1.319  H13 YO2 51 
YO2 H48 H14 H 0 1 N N N N N N -12.590 14.760 49.197 2.374  -3.306 0.538  H48 YO2 52 
YO2 H47 H15 H 0 1 N N N N N N -13.389 13.912 50.563 2.662  -3.076 -1.207 H47 YO2 53 
YO2 H54 H16 H 0 1 N N N N N N -5.764  11.433 54.172 9.552  2.115  1.237  H54 YO2 54 
YO2 H55 H17 H 0 1 N N N N N N -14.177 6.374  46.206 -2.714 1.671  -1.137 H55 YO2 55 
YO2 H56 H18 H 0 1 N N N N N N -13.088 10.282 44.683 -4.757 -2.024 -0.374 H56 YO2 56 
YO2 H57 H19 H 0 1 N N N N N N -12.815 10.923 43.022 -6.111 -2.668 0.020  H57 YO2 57 
YO2 H58 H20 H 0 1 N N N N N N -11.620 4.085  42.464 -6.057 4.200  1.680  H58 YO2 58 
YO2 H59 H21 H 0 1 N N N N N N -11.026 6.565  41.626 -7.173 1.873  2.045  H59 YO2 59 
YO2 H60 H22 H 0 1 N N N N N N -10.677 12.179 42.637 -5.867 -4.146 1.996  H60 YO2 60 
YO2 H62 H23 H 0 1 N N N N N N -10.432 10.733 43.675 -4.841 -2.699 2.149  H62 YO2 61 
YO2 H61 H24 H 0 1 N N N N N N -9.952  10.688 41.945 -6.368 -2.808 3.058  H61 YO2 62 
YO2 H63 H25 H 0 1 N N N N N N -12.735 11.986 40.766 -8.581 -2.461 0.085  H63 YO2 63 
YO2 H65 H26 H 0 1 N N N N N N -11.721 10.641 40.141 -8.050 -4.007 0.790  H65 YO2 64 
YO2 H64 H27 H 0 1 N N N N N N -13.428 10.336 40.611 -8.552 -2.669 1.852  H64 YO2 65 
YO2 H66 H28 H 0 1 N N N N N N -13.220 4.130  45.986 -3.788 5.033  0.766  H66 YO2 66 
YO2 H67 H29 H 0 1 N N N N N N -14.498 3.969  44.735 -2.704 3.859  -0.019 H67 YO2 67 
YO2 H68 H30 H 0 1 N N N N N N -13.426 1.779  45.211 -4.116 3.917  -2.056 H68 YO2 68 
YO2 H70 H31 H 0 1 N N N N N N -13.100 2.297  43.522 -5.200 5.091  -1.271 H70 YO2 69 
YO2 H69 H32 H 0 1 N N N N N N -11.821 2.458  44.774 -3.520 5.543  -1.646 H69 YO2 70 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YO2 N1  C2  SING N N 1  
YO2 N1  C5  SING N N 2  
YO2 N1  C15 SING N N 3  
YO2 C2  C3  SING N N 4  
YO2 C3  C4  SING N N 5  
YO2 C3  C6  SING N N 6  
YO2 C4  C5  SING N N 7  
YO2 C4  C7  SING N N 8  
YO2 C6  C7  SING N N 9  
YO2 C6  C8  SING N N 10 
YO2 C7  C10 SING N N 11 
YO2 C8  N9  SING N N 12 
YO2 N9  C10 SING N N 13 
YO2 N9  C17 SING N N 14 
YO2 C15 O16 DOUB N N 15 
YO2 C15 C28 SING N N 16 
YO2 C17 C18 SING N N 17 
YO2 C17 O19 DOUB N N 18 
YO2 C18 C20 DOUB Y N 19 
YO2 C18 C22 SING Y N 20 
YO2 C20 C21 SING Y N 21 
YO2 C21 C24 DOUB Y N 22 
YO2 C22 C23 DOUB Y N 23 
YO2 C23 C24 SING Y N 24 
YO2 C23 N27 SING Y N 25 
YO2 C24 N25 SING Y N 26 
YO2 N25 N26 SING Y N 27 
YO2 N26 N27 DOUB Y N 28 
YO2 C28 C29 DOUB Y N 29 
YO2 C28 C30 SING Y N 30 
YO2 C29 C35 SING Y N 31 
YO2 C30 C31 DOUB Y N 32 
YO2 C31 C34 SING Y N 33 
YO2 C31 O32 SING N N 34 
YO2 O32 C33 SING N N 35 
YO2 C33 C39 SING N N 36 
YO2 C33 C40 SING N N 37 
YO2 C34 C35 DOUB Y N 38 
YO2 C34 C38 SING Y N 39 
YO2 C35 N36 SING Y N 40 
YO2 N36 C37 SING Y N 41 
YO2 N36 C41 SING N N 42 
YO2 C37 C38 DOUB Y N 43 
YO2 C41 C42 SING N N 44 
YO2 C10 H49 SING N N 45 
YO2 C10 H50 SING N N 46 
YO2 C20 H51 SING N N 47 
YO2 C21 H52 SING N N 48 
YO2 C22 H53 SING N N 49 
YO2 C2  H44 SING N N 50 
YO2 C2  H43 SING N N 51 
YO2 C3  H12 SING N N 52 
YO2 C4  H11 SING N N 53 
YO2 C5  H45 SING N N 54 
YO2 C5  H46 SING N N 55 
YO2 C6  H14 SING N N 56 
YO2 C7  H13 SING N N 57 
YO2 C8  H48 SING N N 58 
YO2 C8  H47 SING N N 59 
YO2 N25 H54 SING N N 60 
YO2 C29 H55 SING N N 61 
YO2 C30 H56 SING N N 62 
YO2 C33 H57 SING N N 63 
YO2 C37 H58 SING N N 64 
YO2 C38 H59 SING N N 65 
YO2 C39 H60 SING N N 66 
YO2 C39 H62 SING N N 67 
YO2 C39 H61 SING N N 68 
YO2 C40 H63 SING N N 69 
YO2 C40 H65 SING N N 70 
YO2 C40 H64 SING N N 71 
YO2 C41 H66 SING N N 72 
YO2 C41 H67 SING N N 73 
YO2 C42 H68 SING N N 74 
YO2 C42 H70 SING N N 75 
YO2 C42 H69 SING N N 76 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YO2 SMILES           ACDLabs              12.01 "CC(C)Oc1cc(cc2n(CC)ccc21)C(=O)N1CC2C3CN(CC3C2C1)C(=O)c1cc2nn[NH]c2cc1"                                                                                                                           
YO2 InChI            InChI                1.06  "InChI=1S/C29H32N6O3/c1-4-33-8-7-19-26(33)10-18(11-27(19)38-16(2)3)29(37)35-14-22-20-12-34(13-21(20)23(22)15-35)28(36)17-5-6-24-25(9-17)31-32-30-24/h5-11,16,20-23H,4,12-15H2,1-3H3,(H,30,31,32)" 
YO2 InChIKey         InChI                1.06  ILIIVOLVKCQDFT-UHFFFAOYSA-N                                                                                                                                                                       
YO2 SMILES_CANONICAL CACTVS               3.385 "CCn1ccc2c(OC(C)C)cc(cc12)C(=O)N3C[C@H]4[C@@H]5CN(C[C@@H]5[C@H]4C3)C(=O)c6ccc7[nH]nnc7c6"                                                                                                         
YO2 SMILES           CACTVS               3.385 "CCn1ccc2c(OC(C)C)cc(cc12)C(=O)N3C[CH]4[CH]5CN(C[CH]5[CH]4C3)C(=O)c6ccc7[nH]nnc7c6"                                                                                                               
YO2 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCn1ccc2c1cc(cc2OC(C)C)C(=O)N3C[C@H]4[C@@H]5CN(C[C@@H]5[C@H]4C3)C(=O)c6ccc7c(c6)nn[nH]7"                                                                                                         
YO2 SMILES           "OpenEye OEToolkits" 2.0.7 "CCn1ccc2c1cc(cc2OC(C)C)C(=O)N3CC4C5CN(CC5C4C3)C(=O)c6ccc7c(c6)nn[nH]7"                                                                                                                           
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
YO2 "SYSTEMATIC NAME" ACDLabs              12.01 "[(3aR,3bS,6aR,6bS)-5-(1H-benzotriazole-5-carbonyl)octahydrocyclobuta[1,2-c:3,4-c']dipyrrol-2(1H)-yl]{1-ethyl-4-[(propan-2-yl)oxy]-1H-indol-6-yl}methanone" 
YO2 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "1~{H}-benzotriazol-5-yl-[(1~{R},2~{R},6~{S},7~{S})-9-(1-ethyl-4-propan-2-yloxy-indol-6-yl)carbonyl-4,9-diazatricyclo[5.3.0.0^{2,6}]decan-4-yl]methanone"   
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YO2 "Create component" 2023-06-19 RCSB 
YO2 "Initial release"  2024-12-18 RCSB 
# 
