data_YO8
# 
_chem_comp.id                                    YO8 
_chem_comp.name                                  "2-[(2-tert-butyl-5-chloro-4-cyanophenoxy)methyl]-N-(1,1-dioxo-1lambda~6~-thietan-3-yl)-1-methyl-1H-imidazole-5-carboxamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C20 H23 Cl N4 O4 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-06-19 
_chem_comp.pdbx_modified_date                    2024-12-13 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        450.939 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YO8 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7G3Q 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YO8 C10 C1  C  0 1 N N N N N N -10.945 8.557  42.228 -2.812 2.779  1.398  C10 YO8 1  
YO8 C11 C2  C  0 1 N N N N N N -13.266 8.746  43.131 -2.453 2.644  -1.070 C11 YO8 2  
YO8 C13 C3  C  0 1 Y N N N N N -12.371 5.163  45.338 -4.186 -1.113 0.148  C13 YO8 3  
YO8 O14 O1  O  0 1 N N N N N N -12.881 7.408  45.780 -2.180 0.141  0.376  O14 YO8 4  
YO8 C15 C4  C  0 1 N N N N N N -13.430 6.972  47.065 -1.517 -1.114 0.548  C15 YO8 5  
YO8 C16 C5  C  0 1 Y N N N N N -13.819 8.126  47.878 -0.041 -0.879 0.748  C16 YO8 6  
YO8 C18 C6  C  0 1 Y N N N N N -15.026 9.590  48.937 1.856  -0.520 1.715  C18 YO8 7  
YO8 C19 C7  C  0 1 Y N N N N N -13.717 9.973  49.093 2.100  -0.596 0.373  C19 YO8 8  
YO8 C20 C8  C  0 1 N N N N N N -13.122 11.099 49.839 3.400  -0.460 -0.294 C20 YO8 9  
YO8 C22 C9  C  0 1 N N N N N N -13.372 12.878 51.393 5.769  0.112  -0.257 C22 YO8 10 
YO8 C23 C10 C  0 1 N N N N N N -12.844 14.057 50.494 6.709  1.020  0.538  C23 YO8 11 
YO8 C25 C11 C  0 1 N N N N N N -14.496 13.732 52.086 6.763  -1.042 -0.107 C25 YO8 12 
YO8 CL1 CL1 CL 0 0 N N N N N N -11.941 2.743  44.850 -6.381 -2.677 -0.084 CL1 YO8 13 
YO8 C2  C12 C  0 1 Y N N N N N -11.773 4.301  44.452 -5.551 -1.153 -0.048 C2  YO8 14 
YO8 C3  C13 C  0 1 Y N N N N N -11.163 4.663  43.313 -6.265 0.038  -0.218 C3  YO8 15 
YO8 C4  C14 C  0 1 N N N N N N -10.597 3.758  42.344 -7.682 0.003  -0.421 C4  YO8 16 
YO8 N5  N1  N  0 1 N N N N N N -10.132 2.984  41.558 -8.806 -0.025 -0.583 N5  YO8 17 
YO8 C6  C15 C  0 1 Y N N N N N -11.173 5.973  43.039 -5.591 1.262  -0.187 C6  YO8 18 
YO8 C7  C16 C  0 1 Y N N N N N -11.757 6.888  43.843 -4.228 1.292  0.010  C7  YO8 19 
YO8 C8  C17 C  0 1 N N N N N N -11.782 8.305  43.482 -3.501 2.611  0.043  C8  YO8 20 
YO8 C9  C18 C  0 1 N N N N N N -11.107 9.238  44.580 -4.502 3.750  -0.165 C9  YO8 21 
YO8 C12 C19 C  0 1 Y N N N N N -12.350 6.455  45.003 -3.523 0.106  0.183  C12 YO8 22 
YO8 N17 N2  N  0 1 Y N N N N N -15.134 8.422  48.165 0.548  -0.698 1.902  N17 YO8 23 
YO8 N21 N3  N  0 1 N N N N N N -13.925 11.854 50.570 4.495  -0.134 0.423  N21 YO8 24 
YO8 S24 S1  S  0 1 N N N N N N -14.135 15.031 51.020 8.138  0.141  -0.153 S24 YO8 25 
YO8 O26 O2  O  0 1 N N N N N N -13.466 16.109 51.700 8.457  0.562  -1.472 O26 YO8 26 
YO8 O27 O3  O  0 1 N N N N N N -15.090 15.233 49.996 9.135  -0.137 0.820  O27 YO8 27 
YO8 O28 O4  O  0 1 N N N N N N -11.960 11.441 49.800 3.490  -0.640 -1.494 O28 YO8 28 
YO8 N29 N4  N  0 1 Y N N N N N -12.944 9.043  48.428 0.879  -0.828 -0.231 N29 YO8 29 
YO8 C30 C20 C  0 1 N N N N N N -11.549 8.946  48.431 0.635  -0.988 -1.666 C30 YO8 30 
YO8 H36 H1  H  0 1 N N N N N N -10.977 9.627  41.974 -2.099 1.968  1.547  H36 YO8 31 
YO8 H37 H2  H  0 1 N N N N N N -9.904  8.256  42.416 -2.286 3.734  1.423  H37 YO8 32 
YO8 H35 H3  H  0 1 N N N N N N -11.352 7.969  41.392 -3.559 2.756  2.192  H35 YO8 33 
YO8 H40 H4  H  0 1 N N N N N N -13.278 9.812  42.860 -2.944 2.524  -2.036 H40 YO8 34 
YO8 H38 H5  H  0 1 N N N N N N -13.635 8.149  42.284 -1.927 3.599  -1.046 H38 YO8 35 
YO8 H39 H6  H  0 1 N N N N N N -13.913 8.582  44.005 -1.740 1.833  -0.922 H39 YO8 36 
YO8 H41 H7  H  0 1 N N N N N N -12.831 4.816  46.252 -3.634 -2.032 0.280  H41 YO8 37 
YO8 H43 H8  H  0 1 N N N N N N -14.314 6.342  46.885 -1.925 -1.624 1.420  H43 YO8 38 
YO8 H42 H9  H  0 1 N N N N N N -12.668 6.390  47.605 -1.669 -1.730 -0.339 H42 YO8 39 
YO8 H44 H10 H  0 1 N N N N N N -15.868 10.121 49.356 2.591  -0.347 2.487  H44 YO8 40 
YO8 H46 H11 H  0 1 N N N N N N -12.613 12.530 52.109 5.636  0.431  -1.291 H46 YO8 41 
YO8 H47 H12 H  0 1 N N N N N N -11.851 14.432 50.782 6.658  2.064  0.229  H47 YO8 42 
YO8 H48 H13 H  0 1 N N N N N N -12.855 13.840 49.416 6.612  0.899  1.617  H48 YO8 43 
YO8 H50 H14 H  0 1 N N N N N N -15.510 13.322 51.972 6.676  -1.561 0.847  H50 YO8 44 
YO8 H49 H15 H  0 1 N N N N N N -14.307 13.952 53.147 6.757  -1.726 -0.956 H49 YO8 45 
YO8 H31 H16 H  0 1 N N N N N N -10.692 6.314  42.134 -6.138 2.184  -0.318 H31 YO8 46 
YO8 H33 H17 H  0 1 N N N N N N -11.157 10.287 44.252 -5.249 3.727  0.628  H33 YO8 47 
YO8 H34 H18 H  0 1 N N N N N N -11.642 9.127  45.535 -3.976 4.705  -0.141 H34 YO8 48 
YO8 H32 H19 H  0 1 N N N N N N -10.055 8.945  44.713 -4.993 3.630  -1.131 H32 YO8 49 
YO8 H45 H20 H  0 1 N N N N N N -14.914 11.707 50.545 4.438  -0.063 1.388  H45 YO8 50 
YO8 H51 H21 H  0 1 N N N N N N -11.121 9.822  48.940 0.517  -0.007 -2.127 H51 YO8 51 
YO8 H53 H22 H  0 1 N N N N N N -11.246 8.031  48.961 1.479  -1.505 -2.124 H53 YO8 52 
YO8 H52 H23 H  0 1 N N N N N N -11.182 8.908  47.395 -0.273 -1.572 -1.817 H52 YO8 53 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YO8 CL1 C2  SING N N 1  
YO8 C2  C3  DOUB Y N 2  
YO8 C2  C13 SING Y N 3  
YO8 C3  C4  SING N N 4  
YO8 C3  C6  SING Y N 5  
YO8 C4  N5  TRIP N N 6  
YO8 C6  C7  DOUB Y N 7  
YO8 C7  C8  SING N N 8  
YO8 C7  C12 SING Y N 9  
YO8 C8  C9  SING N N 10 
YO8 C8  C10 SING N N 11 
YO8 C8  C11 SING N N 12 
YO8 C12 C13 DOUB Y N 13 
YO8 C12 O14 SING N N 14 
YO8 O14 C15 SING N N 15 
YO8 C15 C16 SING N N 16 
YO8 C16 N17 DOUB Y N 17 
YO8 C16 N29 SING Y N 18 
YO8 N17 C18 SING Y N 19 
YO8 C18 C19 DOUB Y N 20 
YO8 C19 C20 SING N N 21 
YO8 C19 N29 SING Y N 22 
YO8 C20 N21 SING N N 23 
YO8 C20 O28 DOUB N N 24 
YO8 N21 C22 SING N N 25 
YO8 C22 C23 SING N N 26 
YO8 C22 C25 SING N N 27 
YO8 C23 S24 SING N N 28 
YO8 S24 C25 SING N N 29 
YO8 S24 O26 DOUB N N 30 
YO8 S24 O27 DOUB N N 31 
YO8 N29 C30 SING N N 32 
YO8 C10 H36 SING N N 33 
YO8 C10 H37 SING N N 34 
YO8 C10 H35 SING N N 35 
YO8 C11 H40 SING N N 36 
YO8 C11 H38 SING N N 37 
YO8 C11 H39 SING N N 38 
YO8 C13 H41 SING N N 39 
YO8 C15 H43 SING N N 40 
YO8 C15 H42 SING N N 41 
YO8 C18 H44 SING N N 42 
YO8 C22 H46 SING N N 43 
YO8 C23 H47 SING N N 44 
YO8 C23 H48 SING N N 45 
YO8 C25 H50 SING N N 46 
YO8 C25 H49 SING N N 47 
YO8 C6  H31 SING N N 48 
YO8 C9  H33 SING N N 49 
YO8 C9  H34 SING N N 50 
YO8 C9  H32 SING N N 51 
YO8 N21 H45 SING N N 52 
YO8 C30 H51 SING N N 53 
YO8 C30 H53 SING N N 54 
YO8 C30 H52 SING N N 55 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YO8 SMILES           ACDLabs              12.01 "O=C(NC1CS(=O)(=O)C1)c1cnc(COc2cc(Cl)c(C#N)cc2C(C)(C)C)n1C"                                                                                           
YO8 InChI            InChI                1.06  "InChI=1S/C20H23ClN4O4S/c1-20(2,3)14-5-12(7-22)15(21)6-17(14)29-9-18-23-8-16(25(18)4)19(26)24-13-10-30(27,28)11-13/h5-6,8,13H,9-11H2,1-4H3,(H,24,26)" 
YO8 InChIKey         InChI                1.06  RPMQOEHYFAZXFQ-UHFFFAOYSA-N                                                                                                                           
YO8 SMILES_CANONICAL CACTVS               3.385 "Cn1c(COc2cc(Cl)c(cc2C(C)(C)C)C#N)ncc1C(=O)NC3C[S](=O)(=O)C3"                                                                                         
YO8 SMILES           CACTVS               3.385 "Cn1c(COc2cc(Cl)c(cc2C(C)(C)C)C#N)ncc1C(=O)NC3C[S](=O)(=O)C3"                                                                                         
YO8 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)(C)c1cc(c(cc1OCc2ncc(n2C)C(=O)NC3CS(=O)(=O)C3)Cl)C#N"                                                                                           
YO8 SMILES           "OpenEye OEToolkits" 2.0.7 "CC(C)(C)c1cc(c(cc1OCc2ncc(n2C)C(=O)NC3CS(=O)(=O)C3)Cl)C#N"                                                                                           
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
YO8 "SYSTEMATIC NAME" ACDLabs              12.01 "2-[(2-tert-butyl-5-chloro-4-cyanophenoxy)methyl]-N-(1,1-dioxo-1lambda~6~-thietan-3-yl)-1-methyl-1H-imidazole-5-carboxamide"         
YO8 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-[1,1-bis(oxidanylidene)thietan-3-yl]-2-[(2-~{tert}-butyl-5-chloranyl-4-cyano-phenoxy)methyl]-3-methyl-imidazole-4-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YO8 "Create component" 2023-06-19 RCSB 
YO8 "Initial release"  2024-12-18 RCSB 
# 
