data_00K # _chem_comp.id 00K _chem_comp.name "(1S,7S)-7-amino-N-[(2R,3S)-7-amino-1-(cyclohexylamino)-2-hydroxy-1-oxoheptan-3-yl]-7-benzyl-8-oxohexahydro-1H-pyrazolo[1,2-a]pyridazine-1-carboxamide" _chem_comp.type peptide-like _chem_comp.pdbx_type HETAIN _chem_comp.formula "C28 H44 N6 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms MOL-106 _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2010-10-27 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 528.687 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 00K _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1A46 _chem_comp.pdbx_subcomponent_list "00U 00V ANL" _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 00K C1 C1 C 0 1 N N S N N N 17.833 -13.042 21.662 -1.501 2.152 -0.984 C1 00U 1 00K N1 N1 N 0 1 N N N N N N 18.852 -15.242 21.444 -2.780 3.240 0.623 N1 00U 2 00K O1 O1 O 0 1 N N N N N N 15.985 -14.290 23.380 -2.826 -0.164 -0.149 O1 00U 3 00K C2 C2 C 0 1 N N N N N N 18.887 -13.071 20.587 -1.217 3.671 -1.083 C2 00U 4 00K N2 N2 N 0 1 N N N N N N 17.775 -14.509 22.048 -2.531 2.013 0.058 N2 00U 5 00K O2 O2 O 0 1 N N N N N N 16.462 -13.962 19.837 -0.211 0.816 0.472 O2 00U 6 00K C3 C3 C 0 1 N N N N N N 19.851 -14.220 21.117 -2.490 4.260 -0.415 C3 00U 7 00K N3 N3 N 0 1 N N N N N N 15.809 -16.730 23.661 -3.842 -0.114 2.499 N3 00U 8 00K C4 C4 C 0 1 N N N N N N 19.327 -16.444 22.156 -4.186 3.311 1.044 C4 00U 9 00K C5 C5 C 0 1 N N N N N N 18.134 -17.230 22.762 -4.455 2.205 2.064 C5 00U 10 00K C6 C6 C 0 1 N N S N N N 17.223 -16.329 23.597 -4.227 0.832 1.443 C6 00U 11 00K C7 C7 C 0 1 N N N N N N 17.032 -14.923 23.046 -3.149 0.868 0.400 C7 00U 12 00K C8 C8 C 0 1 N N N N N N 16.638 -13.061 20.755 -0.251 1.411 -0.584 C8 00U 13 00K C9 C9 C 0 1 N N N N N N 17.415 -16.417 25.123 -5.530 0.355 0.797 C9 00U 14 00K C10 C10 C 0 1 Y N N N N N 18.764 -15.984 25.582 -5.351 -1.052 0.287 C10 00U 15 00K C11 C11 C 0 1 Y N N N N N 19.051 -14.634 25.760 -4.897 -1.269 -1.000 C11 00U 16 00K C12 C12 C 0 1 Y N N N N N 20.391 -14.252 26.076 -4.733 -2.559 -1.467 C12 00U 17 00K C13 C13 C 0 1 Y N N N N N 21.429 -15.178 26.215 -5.023 -3.634 -0.647 C13 00U 18 00K C14 C14 C 0 1 Y N N N N N 21.099 -16.548 26.098 -5.477 -3.417 0.641 C14 00U 19 00K C15 C15 C 0 1 Y N N N N N 19.789 -16.951 25.756 -5.636 -2.127 1.109 C15 00U 20 00K C C C 0 1 N N S N N N 14.496 -10.945 18.713 3.245 1.310 -1.715 C 00V 21 00K N N N 0 1 N N N N N N 15.647 -12.089 20.769 0.822 1.410 -1.400 N 00V 22 00K O O O 0 1 N N N N N N 13.380 -10.684 18.077 3.125 1.116 -3.126 O 00V 23 00K CA CA C 0 1 N N S N N N 14.494 -11.892 19.909 2.037 0.689 -1.011 CA 00V 24 00K CB CB C 0 1 N N N N N N 13.195 -11.615 20.628 1.910 -0.781 -1.417 CB 00V 25 00K CD CD C 0 1 N N N N N N 11.561 -12.220 22.437 0.652 -2.904 -1.024 CD 00V 26 00K CE CE C 0 1 N N N N N N 11.170 -13.351 23.353 -0.478 -3.557 -0.227 CE 00V 27 00K CG CG C 0 1 N N N N N N 12.867 -12.504 21.757 0.779 -1.434 -0.619 CG 00V 28 00K CX CX C 0 1 N N N N N N 15.345 -11.435 17.551 4.507 0.650 -1.223 CX 00V 29 00K OX OX O 0 1 N N N N N N 16.474 -11.089 17.731 5.186 -0.006 -1.985 OX 00V 30 00K NZ NZ N 0 1 N N N N N N 10.038 -13.111 24.235 -0.600 -4.968 -0.616 NZ 00V 31 00K C1X C1X C 0 1 N N N N N N 15.651 -12.333 15.335 6.109 0.147 0.544 C1 ANL 32 00K C6X C6X C 0 1 N N N N N N 15.277 -11.740 13.998 5.806 -1.299 0.940 C2 ANL 33 00K C5X C5X C 0 1 N N N N N N 14.168 -12.561 13.354 7.088 -1.969 1.440 C3 ANL 34 00K C4X C4X C 0 1 N N N N N N 14.599 -13.999 13.180 7.620 -1.208 2.656 C4 ANL 35 00K C3X C3X C 0 1 N N N N N N 14.956 -14.603 14.539 7.922 0.239 2.259 C5 ANL 36 00K C2X C2X C 0 1 N N N N N N 16.039 -13.796 15.250 6.641 0.908 1.759 C6 ANL 37 00K NX NX N 0 1 N N N N N N 14.804 -11.921 16.457 4.881 0.789 0.065 N ANL 38 00K H1 H1 H 0 1 N N N N N N 17.934 -12.293 22.461 -1.874 1.775 -1.936 H1 00U 39 00K H2 H2 H 0 1 N N N N N N 18.466 -13.305 19.598 -0.321 3.939 -0.524 H2 00U 40 00K H2A H2A H 0 1 N N N N N N 19.406 -12.106 20.487 -1.138 3.988 -2.123 H2A 00U 41 00K H3 H3 H 0 1 N N N N N N 20.575 -14.555 20.360 -3.309 4.333 -1.131 H3 00U 42 00K H3A H3A H 0 1 N N N N N N 20.449 -13.911 21.987 -2.281 5.229 0.038 H3A 00U 43 00K HN3 HN3 H 0 1 N N N N N N 15.303 -16.080 24.227 -3.684 -1.035 2.119 HN3 00U 44 00K HN3A HN3A H 0 0 N N N N N N 15.423 -16.739 22.738 -3.030 0.215 3.000 HN3A 00U 45 00K H4 H4 H 0 1 N N N N N N 19.862 -17.093 21.447 -4.382 4.282 1.498 H4 00U 46 00K H4A H4A H 0 1 N N N N N N 20.004 -16.137 22.967 -4.834 3.174 0.178 H4A 00U 47 00K H5 H5 H 0 1 N N N N N N 17.544 -17.663 21.941 -3.784 2.330 2.914 H5 00U 48 00K H5A H5A H 0 1 N N N N N N 18.530 -18.027 23.409 -5.487 2.277 2.408 H5A 00U 49 00K H9 H9 H 0 1 N N N N N N 16.667 -15.766 25.600 -6.331 0.375 1.536 H9 00U 50 00K H9A H9A H 0 1 N N N N N N 17.271 -17.465 25.426 -5.785 1.012 -0.034 H9A 00U 51 00K H11 H11 H 0 1 N N N N N N 18.275 -13.889 25.661 -4.670 -0.430 -1.641 H11 00U 52 00K H12 H12 H 0 1 N N N N N N 20.611 -13.204 26.213 -4.379 -2.729 -2.474 H12 00U 53 00K H13 H13 H 0 1 N N N N N N 22.443 -14.859 26.404 -4.895 -4.642 -1.012 H13 00U 54 00K H14 H14 H 0 1 N N N N N N 21.858 -17.296 26.272 -5.703 -4.256 1.281 H14 00U 55 00K H15 H15 H 0 1 N N N N N N 19.566 -18.000 25.626 -5.986 -1.957 2.117 H15 00U 56 00K HN HN H 0 1 N N N N N N 15.744 -11.408 21.495 0.789 1.885 -2.245 HN 00V 57 00K HO HO H 0 1 N N N N N N 13.555 -10.081 17.364 3.085 0.188 -3.394 HO 00V 58 00K HA HA H 0 1 N N N N N N 14.591 -12.900 19.480 2.170 0.758 0.068 HA 00V 59 00K HB HB H 0 1 N N N N N N 13.255 -10.592 21.027 1.688 -0.846 -2.482 HB 00V 60 00K HD HD H 0 1 N N N N N N 10.780 -12.094 21.672 1.589 -3.420 -0.816 HD 00V 61 00K HDA HDA H 0 1 N N N N N N 11.660 -11.299 23.030 0.430 -2.969 -2.089 HDA 00V 62 00K HE HE H 0 1 N N N N N N 10.910 -14.210 22.717 -0.256 -3.492 0.838 HE 00V 63 00K HG HG H 0 1 N N N N N N 12.823 -13.532 21.368 1.001 -1.369 0.446 HG 00V 64 00K HNZ HNZ H 0 1 N N N N N N 9.871 -13.924 24.793 0.275 -5.454 -0.493 HNZ 00V 65 00K H40 H40 H 0 1 N Y N N N N 14.846 -10.061 19.266 3.284 2.377 -1.497 H40 00V 66 00K H41 H41 H 0 1 N N N N N N 12.386 -11.715 19.889 2.847 -1.297 -1.208 H41 00V 67 00K H42 H42 H 0 1 N N N N N N 12.039 -13.568 23.991 -1.415 -3.040 -0.435 H42 00V 68 00K H43 H43 H 0 1 N N N N N N 13.663 -12.395 22.508 -0.158 -0.917 -0.827 H43 00V 69 00K H44 H44 H 0 1 N N N N N N 10.239 -12.334 24.831 -1.341 -5.422 -0.103 H44 00V 70 00K H6X H6X H 0 1 N N N N N N 16.159 -11.742 13.340 5.058 -1.310 1.732 H2 ANL 71 00K H5X H5X H 0 1 N N N N N N 13.932 -12.135 12.368 7.837 -1.959 0.648 H3 ANL 72 00K H4X H4X H 0 1 N N N N N N 15.479 -14.038 12.521 8.533 -1.685 3.012 H4 ANL 73 00K H3X H3X H 0 1 N N N N N N 15.324 -15.628 14.384 8.671 0.249 1.467 H5 ANL 74 00K H2X H2X H 0 1 N N N N N N 16.980 -13.885 14.688 6.856 1.939 1.477 H6 ANL 75 00K HNX HNX H 0 1 N N N N N N 13.810 -12.010 16.390 4.339 1.313 0.674 HN1 ANL 76 00K H1X H1X H 0 1 N N N N N N 16.596 -11.851 15.626 6.857 0.158 -0.249 H1X ANL 77 00K H2XA H2XA H 0 0 N N N N N N 16.171 -14.192 16.268 5.892 0.898 2.551 H2XA ANL 78 00K H3XA H3XA H 0 0 N N N N N N 14.054 -14.614 15.168 8.302 0.781 3.125 H3XA ANL 79 00K H4XA H4XA H 0 0 N N N N N N 13.776 -14.574 12.731 6.872 -1.219 3.448 H4XA ANL 80 00K H5XA H5XA H 0 0 N N N N N N 13.277 -12.529 13.998 6.873 -3.000 1.723 H5XA ANL 81 00K H6XA H6XA H 0 0 N N N N N N 14.926 -10.708 14.144 5.427 -1.842 0.074 H6XA ANL 82 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 00K C CA SING N N 1 00K C H40 SING N N 2 00K N HN SING N N 3 00K O C SING N N 4 00K O HO SING N N 5 00K C1 N2 SING N N 6 00K C1 H1 SING N N 7 00K N1 N2 SING N N 8 00K N1 C4 SING N N 9 00K C2 C1 SING N N 10 00K C2 C3 SING N N 11 00K C2 H2 SING N N 12 00K C2 H2A SING N N 13 00K N2 C7 SING N N 14 00K O2 C8 DOUB N N 15 00K C3 N1 SING N N 16 00K C3 H3 SING N N 17 00K C3 H3A SING N N 18 00K N3 HN3 SING N N 19 00K N3 HN3A SING N N 20 00K C4 C5 SING N N 21 00K C4 H4 SING N N 22 00K C4 H4A SING N N 23 00K C5 C6 SING N N 24 00K C5 H5 SING N N 25 00K C5 H5A SING N N 26 00K C6 N3 SING N N 27 00K C6 C9 SING N N 28 00K C7 O1 DOUB N N 29 00K C7 C6 SING N N 30 00K C8 N SING N N 31 00K C8 C1 SING N N 32 00K C9 C10 SING N N 33 00K C9 H9 SING N N 34 00K C9 H9A SING N N 35 00K CA N SING N N 36 00K CA CB SING N N 37 00K CA HA SING N N 38 00K CB CG SING N N 39 00K CB HB SING N N 40 00K CD CE SING N N 41 00K CD HD SING N N 42 00K CD HDA SING N N 43 00K CE NZ SING N N 44 00K CE HE SING N N 45 00K CG CD SING N N 46 00K CG HG SING N N 47 00K CX C SING N N 48 00K CX OX DOUB N N 49 00K NX CX SING N N 50 00K NX HNX SING N N 51 00K NZ HNZ SING N N 52 00K C10 C15 DOUB Y N 53 00K C10 C11 SING Y N 54 00K C11 C12 DOUB Y N 55 00K C11 H11 SING N N 56 00K C12 C13 SING Y N 57 00K C12 H12 SING N N 58 00K C13 H13 SING N N 59 00K C14 C13 DOUB Y N 60 00K C14 H14 SING N N 61 00K C15 C14 SING Y N 62 00K C15 H15 SING N N 63 00K C1X NX SING N N 64 00K C1X H1X SING N N 65 00K C2X C1X SING N N 66 00K C2X H2X SING N N 67 00K C2X H2XA SING N N 68 00K C3X C2X SING N N 69 00K C3X H3X SING N N 70 00K C3X H3XA SING N N 71 00K C4X C3X SING N N 72 00K C4X C5X SING N N 73 00K C4X H4X SING N N 74 00K C4X H4XA SING N N 75 00K C5X C6X SING N N 76 00K C5X H5X SING N N 77 00K C5X H5XA SING N N 78 00K C6X C1X SING N N 79 00K C6X H6X SING N N 80 00K C6X H6XA SING N N 81 00K CB H41 SING N N 82 00K CE H42 SING N N 83 00K CG H43 SING N N 84 00K NZ H44 SING N N 85 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 00K SMILES ACDLabs 12.01 "O=C(NC1CCCCC1)C(O)C(NC(=O)C3N2C(=O)C(N)(CCN2CC3)Cc4ccccc4)CCCCN" 00K SMILES_CANONICAL CACTVS 3.370 "NCCCC[C@H](NC(=O)[C@@H]1CCN2CC[C@@](N)(Cc3ccccc3)C(=O)N12)[C@H](O)C(=O)NC4CCCCC4" 00K SMILES CACTVS 3.370 "NCCCC[CH](NC(=O)[CH]1CCN2CC[C](N)(Cc3ccccc3)C(=O)N12)[CH](O)C(=O)NC4CCCCC4" 00K SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "c1ccc(cc1)C[C@@]2(CC[N@@]3CC[C@H](N3C2=O)C(=O)N[C@@H](CCCCN)[C@@H](C(=O)NC4CCCCC4)O)N" 00K SMILES "OpenEye OEToolkits" 1.7.0 "c1ccc(cc1)CC2(CCN3CCC(N3C2=O)C(=O)NC(CCCCN)C(C(=O)NC4CCCCC4)O)N" 00K InChI InChI 1.03 "InChI=1S/C28H44N6O4/c29-16-8-7-13-22(24(35)26(37)31-21-11-5-2-6-12-21)32-25(36)23-14-17-33-18-15-28(30,27(38)34(23)33)19-20-9-3-1-4-10-20/h1,3-4,9-10,21-24,35H,2,5-8,11-19,29-30H2,(H,31,37)(H,32,36)/t22-,23-,24-,28+/m0/s1" 00K InChIKey InChI 1.03 FYDHYBJQXIEOSE-HXFQDRMMSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 00K "SYSTEMATIC NAME" ACDLabs 12.01 "(1S,7S)-7-amino-N-[(2S,3S)-7-amino-1-(cyclohexylamino)-2-hydroxy-1-oxoheptan-3-yl]-7-benzyl-8-oxohexahydro-1H-pyrazolo[1,2-a]pyridazine-1-carboxamide" 00K "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "(3S,6S,9S)-6-azanyl-N-[(2S,3S)-7-azanyl-1-(cyclohexylamino)-2-hydroxy-1-oxo-heptan-3-yl]-5-oxo-6-(phenylmethyl)-2,3,7,8-tetrahydro-1H-pyrazolo[1,2-a]pyridazine-3-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 00K "Create component" 2010-10-27 RCSB 00K "Modify subcomponent list" 2010-11-12 RCSB 00K "Modify aromatic_flag" 2011-06-04 RCSB 00K "Modify descriptor" 2011-06-04 RCSB 00K "Modify synonyms" 2021-03-01 PDBE 00K "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 00K _pdbx_chem_comp_synonyms.name MOL-106 _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id 00K _pdbx_chem_comp_pcm.modified_residue_id SER _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C _pdbx_chem_comp_pcm.modified_residue_id_linking_atom OG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #