data_00S # _chem_comp.id 00S _chem_comp.name "4-(aminomethyl)benzenecarboximidamide" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C8 H11 N3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2010-11-12 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 149.193 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 00S _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2ZO3 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 00S N23 N23 N 0 1 N N N Y Y N 16.455 -10.870 20.546 3.812 0.039 0.878 N23 00S 1 00S C16 C16 C 0 1 N N N N N N 15.169 -10.806 19.793 3.192 0.043 -0.454 C16 00S 2 00S C17 C17 C 0 1 Y N N N N N 14.059 -10.676 20.837 1.692 0.016 -0.310 C17 00S 3 00S C22 C22 C 0 1 Y N N N N N 13.616 -11.818 21.486 1.027 -1.195 -0.251 C22 00S 4 00S C21 C21 C 0 1 Y N N N N N 12.614 -11.793 22.446 -0.346 -1.226 -0.119 C21 00S 5 00S C24 C24 C 0 1 Y N N N N N 12.015 -10.571 22.785 -1.063 -0.032 -0.045 C24 00S 6 00S C27 C27 C 0 1 N N N N N N 10.922 -10.560 23.839 -2.537 -0.058 0.097 C27 00S 7 00S N35 N35 N 0 1 N N N N N N 10.239 -11.689 24.131 -3.166 -1.197 0.154 N35 00S 8 00S N34 N34 N 0 1 N N N N N N 10.644 -9.483 24.453 -3.243 1.123 0.170 N34 00S 9 00S C19 C19 C 0 1 Y N N N N N 12.449 -9.415 22.144 -0.387 1.186 -0.105 C19 00S 10 00S C18 C18 C 0 1 Y N N N N N 13.464 -9.454 21.173 0.987 1.204 -0.231 C18 00S 11 00S HN23 HN23 H 0 0 N N N Y Y N 17.215 -10.956 19.902 3.501 -0.754 1.420 HN23 00S 12 00S H16 H16 H 0 1 N N N N N N 15.163 -9.939 19.115 3.490 0.943 -0.990 H16 00S 13 00S H16A H16A H 0 0 N N N N N N 15.028 -11.718 19.194 3.520 -0.836 -1.009 H16A 00S 14 00S H22 H22 H 0 1 N N N N N N 14.069 -12.766 21.234 1.584 -2.119 -0.308 H22 00S 15 00S H21 H21 H 0 1 N N N N N N 12.298 -12.707 22.928 -0.864 -2.172 -0.073 H21 00S 16 00S HN35 HN35 H 0 0 N N N N N N 9.551 -11.538 24.841 -4.131 -1.214 0.247 HN35 00S 17 00S HN34 HN34 H 0 0 N N N N N N 9.924 -9.475 25.147 -2.775 1.971 0.128 HN34 00S 18 00S HN3A HN3A H 0 0 N N N N N N 11.145 -8.644 24.242 -4.208 1.106 0.263 HN3A 00S 19 00S H19 H19 H 0 1 N N N N N N 11.996 -8.468 22.398 -0.937 2.114 -0.048 H19 00S 20 00S H18 H18 H 0 1 N N N N N N 13.784 -8.544 20.687 1.512 2.146 -0.273 H18 00S 21 00S H2 H2 H 0 1 N Y N Y Y N 16.568 -10.035 21.085 4.819 0.056 0.808 H2 00S 22 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 00S C16 N23 SING N N 1 00S N23 HN23 SING N N 2 00S C16 C17 SING N N 3 00S C16 H16 SING N N 4 00S C16 H16A SING N N 5 00S C17 C18 DOUB Y N 6 00S C17 C22 SING Y N 7 00S C22 C21 DOUB Y N 8 00S C22 H22 SING N N 9 00S C21 C24 SING Y N 10 00S C21 H21 SING N N 11 00S C19 C24 DOUB Y N 12 00S C24 C27 SING N N 13 00S C27 N35 DOUB N N 14 00S C27 N34 SING N N 15 00S N35 HN35 SING N N 16 00S N34 HN34 SING N N 17 00S N34 HN3A SING N N 18 00S C18 C19 SING Y N 19 00S C19 H19 SING N N 20 00S C18 H18 SING N N 21 00S N23 H2 SING N N 22 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 00S SMILES ACDLabs 12.01 "[N@H]=C(c1ccc(cc1)CN)N" 00S SMILES_CANONICAL CACTVS 3.370 "NCc1ccc(cc1)C(N)=N" 00S SMILES CACTVS 3.370 "NCc1ccc(cc1)C(N)=N" 00S SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "[H]/N=C(/c1ccc(cc1)CN)\N" 00S SMILES "OpenEye OEToolkits" 1.7.0 "c1cc(ccc1CN)C(=N)N" 00S InChI InChI 1.03 "InChI=1S/C8H11N3/c9-5-6-1-3-7(4-2-6)8(10)11/h1-4H,5,9H2,(H3,10,11)" 00S InChIKey InChI 1.03 CHOGNBXWAZDZBM-UHFFFAOYSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 00S "SYSTEMATIC NAME" ACDLabs 12.01 "4-(aminomethyl)benzenecarboximidamide" 00S "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "4-(aminomethyl)benzenecarboximidamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 00S "Create component" 2010-11-12 RCSB 00S "Modify aromatic_flag" 2011-06-04 RCSB 00S "Modify descriptor" 2011-06-04 RCSB 00S "Modify backbone" 2023-11-03 PDBE 00S "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id 00S _pdbx_chem_comp_pcm.modified_residue_id ? _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Non-standard residue" _pdbx_chem_comp_pcm.position "Amino-acid side chain and backbone" _pdbx_chem_comp_pcm.polypeptide_position C-terminal _pdbx_chem_comp_pcm.comp_id_linking_atom ? _pdbx_chem_comp_pcm.modified_residue_id_linking_atom ? _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #