data_07J # _chem_comp.id 07J _chem_comp.name "3-(2,6-dichloro-3,5-dimethoxyphenyl)-1-(6-{[4-(4-ethylpiperazin-1-yl)phenyl]amino}pyrimidin-4-yl)-1-methylurea" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H31 Cl2 N7 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms BGJ398 _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2011-09-27 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 560.475 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 07J _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3TT0 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 07J O1 O1 O 0 1 N N N -14.787 7.616 11.055 2.732 0.277 -0.082 O1 07J 1 07J C2 C2 C 0 1 N N N -15.083 8.601 11.722 3.076 -0.735 -0.661 C2 07J 2 07J N3 N3 N 0 1 N N N -14.223 9.676 11.847 4.384 -1.049 -0.750 N3 07J 3 07J C4 C4 C 0 1 Y N N -12.994 9.686 11.166 5.350 -0.180 -0.226 C4 07J 4 07J C5 C5 C 0 1 Y N N -11.898 8.980 11.619 6.426 -0.688 0.489 C5 07J 5 07J CL1 CL1 CL 0 0 N N N -11.972 8.068 13.081 6.576 -2.400 0.734 CL1 07J 6 07J C7 C7 C 0 1 Y N N -10.715 9.015 10.908 7.382 0.173 1.007 C7 07J 7 07J O8 O8 O 0 1 N N N -9.661 8.271 11.425 8.437 -0.324 1.706 O8 07J 8 07J C9 C9 C 0 1 N N N -8.548 8.295 10.540 9.383 0.621 2.211 C9 07J 9 07J C10 C10 C 0 1 Y N N -10.631 9.738 9.732 7.263 1.541 0.811 C10 07J 10 07J C11 C11 C 0 1 Y N N -11.724 10.455 9.280 6.188 2.049 0.097 C11 07J 11 07J O12 O12 O 0 1 N N N -11.725 11.212 8.110 6.072 3.390 -0.094 O12 07J 12 07J C13 C13 C 0 1 N N N -10.485 11.081 7.419 7.094 4.216 0.468 C13 07J 13 07J C14 C14 C 0 1 Y N N -12.900 10.413 9.998 5.234 1.189 -0.427 C14 07J 14 07J CL2 CL2 CL 0 0 N N N -14.267 11.294 9.452 3.889 1.825 -1.321 CL2 07J 15 07J N16 N16 N 0 1 N N N -16.287 8.711 12.416 2.150 -1.546 -1.211 N16 07J 16 07J C17 C17 C 0 1 N N N -17.227 7.611 12.333 2.555 -2.817 -1.815 C17 07J 17 07J C18 C18 C 0 1 Y N N -16.684 9.855 13.161 0.809 -1.175 -1.203 C18 07J 18 07J C19 C19 C 0 1 Y N N -18.024 10.012 13.461 -0.040 -1.621 -0.197 C19 07J 19 07J C20 C20 C 0 1 Y N N -18.423 11.123 14.177 -1.373 -1.222 -0.234 C20 07J 20 07J N21 N21 N 0 1 Y N N -17.534 12.048 14.560 -1.784 -0.432 -1.225 N21 07J 21 07J C22 C22 C 0 1 Y N N -16.262 11.813 14.219 -0.947 -0.031 -2.160 C22 07J 22 07J N23 N23 N 0 1 Y N N -15.779 10.766 13.543 0.322 -0.383 -2.156 N23 07J 23 07J N24 N24 N 0 1 N N N -19.772 11.354 14.509 -2.261 -1.640 0.746 N24 07J 24 07J C25 C25 C 0 1 Y N N -20.834 10.433 14.571 -3.623 -1.335 0.633 C25 07J 25 07J C26 C26 C 0 1 Y N N -21.286 9.751 13.459 -4.219 -1.270 -0.619 C26 07J 26 07J C27 C27 C 0 1 Y N N -22.348 8.874 13.556 -5.562 -0.970 -0.731 C27 07J 27 07J C28 C28 C 0 1 Y N N -22.994 8.671 14.765 -6.317 -0.734 0.410 C28 07J 28 07J C29 C29 C 0 1 Y N N -22.548 9.370 15.869 -5.722 -0.799 1.663 C29 07J 29 07J C30 C30 C 0 1 Y N N -21.483 10.241 15.775 -4.380 -1.104 1.775 C30 07J 30 07J N31 N31 N 0 1 N N N -24.089 7.789 14.922 -7.679 -0.429 0.298 N31 07J 31 07J C32 C32 C 0 1 N N N -25.206 8.445 15.604 -8.282 -0.217 1.621 C32 07J 32 07J C33 C33 C 0 1 N N N -26.287 7.419 15.884 -9.783 0.034 1.459 C33 07J 33 07J N34 N34 N 0 1 N N N -26.626 6.798 14.573 -9.991 1.205 0.595 N34 07J 34 07J C35 C35 C 0 1 N N N -27.892 6.024 14.616 -11.420 1.525 0.477 C35 07J 35 07J C36 C36 C 0 1 N N N -29.025 7.014 14.762 -11.584 2.879 -0.215 C36 07J 36 07J C37 C37 C 0 1 N N N -25.498 6.043 13.949 -9.388 0.993 -0.728 C37 07J 37 07J C38 C38 C 0 1 N N N -24.375 7.034 13.700 -7.887 0.741 -0.566 C38 07J 38 07J H1 H1 H 0 1 N N N -14.477 10.451 12.425 4.656 -1.877 -1.176 H1 07J 39 07J H2 H2 H 0 1 N N N -7.726 7.701 10.967 8.881 1.311 2.889 H2 07J 40 07J H3 H3 H 0 1 N N N -8.842 7.869 9.570 10.172 0.093 2.748 H3 07J 41 07J H4 H4 H 0 1 N N N -8.215 9.334 10.398 9.818 1.178 1.381 H4 07J 42 07J H5 H5 H 0 1 N N N -9.711 9.743 9.166 8.007 2.211 1.215 H5 07J 43 07J H6 H6 H 0 1 N N N -10.510 11.686 6.501 6.881 5.261 0.243 H6 07J 44 07J H7 H7 H 0 1 N N N -9.666 11.430 8.066 7.121 4.076 1.548 H7 07J 45 07J H8 H8 H 0 1 N N N -10.321 10.025 7.157 8.059 3.942 0.041 H8 07J 46 07J H9 H9 H 0 1 N N N -18.121 7.846 12.929 2.531 -3.602 -1.060 H9 07J 47 07J H10 H10 H 0 1 N N N -17.517 7.455 11.283 1.870 -3.069 -2.625 H10 07J 48 07J H11 H11 H 0 1 N N N -16.756 6.697 12.723 3.566 -2.725 -2.211 H11 07J 49 07J H12 H12 H 0 1 N N N -18.748 9.277 13.140 0.325 -2.261 0.593 H12 07J 50 07J H13 H13 H 0 1 N N N -15.541 12.556 14.526 -1.311 0.609 -2.950 H13 07J 51 07J H14 H14 H 0 1 N N N -20.007 12.300 14.731 -1.938 -2.143 1.510 H14 07J 52 07J H15 H15 H 0 1 N N N -20.805 9.905 12.505 -3.631 -1.454 -1.507 H15 07J 53 07J H16 H16 H 0 1 N N N -22.680 8.339 12.678 -6.025 -0.919 -1.705 H16 07J 54 07J H17 H17 H 0 1 N N N -23.041 9.233 16.820 -6.309 -0.615 2.551 H17 07J 55 07J H18 H18 H 0 1 N N N -21.153 10.778 16.652 -3.918 -1.159 2.749 H18 07J 56 07J H19 H19 H 0 1 N N N -24.856 8.880 16.552 -8.126 -1.102 2.238 H19 07J 57 07J H20 H20 H 0 1 N N N -25.611 9.243 14.965 -7.818 0.646 2.098 H20 07J 58 07J H21 H21 H 0 1 N N N -27.173 7.902 16.322 -10.252 -0.840 1.007 H21 07J 59 07J H22 H22 H 0 1 N N N -25.922 6.657 16.589 -10.228 0.220 2.437 H22 07J 60 07J H24 H24 H 0 1 N N N -28.013 5.444 13.689 -11.917 0.753 -0.111 H24 07J 61 07J H25 H25 H 0 1 N N N -27.883 5.330 15.470 -11.866 1.568 1.470 H25 07J 62 07J H26 H26 H 0 1 N N N -29.982 6.474 14.797 -12.644 3.116 -0.303 H26 07J 63 07J H27 H27 H 0 1 N N N -28.893 7.587 15.691 -11.086 3.650 0.373 H27 07J 64 07J H28 H28 H 0 1 N N N -29.024 7.702 13.903 -11.138 2.836 -1.209 H28 07J 65 07J H29 H29 H 0 1 N N N -25.823 5.590 13.000 -9.852 0.130 -1.205 H29 07J 66 07J H30 H30 H 0 1 N N N -25.157 5.244 14.623 -9.544 1.878 -1.345 H30 07J 67 07J H31 H31 H 0 1 N N N -23.471 6.488 13.391 -7.418 1.615 -0.114 H31 07J 68 07J H32 H32 H 0 1 N N N -24.677 7.732 12.905 -7.442 0.555 -1.544 H32 07J 69 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 07J C13 O12 SING N N 1 07J O12 C11 SING N N 2 07J C11 C10 DOUB Y N 3 07J C11 C14 SING Y N 4 07J CL2 C14 SING N N 5 07J C10 C7 SING Y N 6 07J C14 C4 DOUB Y N 7 07J C9 O8 SING N N 8 07J C7 O8 SING N N 9 07J C7 C5 DOUB Y N 10 07J O1 C2 DOUB N N 11 07J C4 C5 SING Y N 12 07J C4 N3 SING N N 13 07J C5 CL1 SING N N 14 07J C2 N3 SING N N 15 07J C2 N16 SING N N 16 07J C17 N16 SING N N 17 07J N16 C18 SING N N 18 07J C18 C19 DOUB Y N 19 07J C18 N23 SING Y N 20 07J C26 C27 DOUB Y N 21 07J C26 C25 SING Y N 22 07J C19 C20 SING Y N 23 07J N23 C22 DOUB Y N 24 07J C27 C28 SING Y N 25 07J C38 C37 SING N N 26 07J C38 N31 SING N N 27 07J C37 N34 SING N N 28 07J C20 N24 SING N N 29 07J C20 N21 DOUB Y N 30 07J C22 N21 SING Y N 31 07J N24 C25 SING N N 32 07J C25 C30 DOUB Y N 33 07J N34 C35 SING N N 34 07J N34 C33 SING N N 35 07J C35 C36 SING N N 36 07J C28 N31 SING N N 37 07J C28 C29 DOUB Y N 38 07J N31 C32 SING N N 39 07J C32 C33 SING N N 40 07J C30 C29 SING Y N 41 07J N3 H1 SING N N 42 07J C9 H2 SING N N 43 07J C9 H3 SING N N 44 07J C9 H4 SING N N 45 07J C10 H5 SING N N 46 07J C13 H6 SING N N 47 07J C13 H7 SING N N 48 07J C13 H8 SING N N 49 07J C17 H9 SING N N 50 07J C17 H10 SING N N 51 07J C17 H11 SING N N 52 07J C19 H12 SING N N 53 07J C22 H13 SING N N 54 07J N24 H14 SING N N 55 07J C26 H15 SING N N 56 07J C27 H16 SING N N 57 07J C29 H17 SING N N 58 07J C30 H18 SING N N 59 07J C32 H19 SING N N 60 07J C32 H20 SING N N 61 07J C33 H21 SING N N 62 07J C33 H22 SING N N 63 07J C35 H24 SING N N 64 07J C35 H25 SING N N 65 07J C36 H26 SING N N 66 07J C36 H27 SING N N 67 07J C36 H28 SING N N 68 07J C37 H29 SING N N 69 07J C37 H30 SING N N 70 07J C38 H31 SING N N 71 07J C38 H32 SING N N 72 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 07J SMILES ACDLabs 12.01 "Clc1c(OC)cc(OC)c(Cl)c1NC(=O)N(c2ncnc(c2)Nc4ccc(N3CCN(CC)CC3)cc4)C" 07J InChI InChI 1.03 "InChI=1S/C26H31Cl2N7O3/c1-5-34-10-12-35(13-11-34)18-8-6-17(7-9-18)31-21-15-22(30-16-29-21)33(2)26(36)32-25-23(27)19(37-3)14-20(38-4)24(25)28/h6-9,14-16H,5,10-13H2,1-4H3,(H,32,36)(H,29,30,31)" 07J InChIKey InChI 1.03 QADPYRIHXKWUSV-UHFFFAOYSA-N 07J SMILES_CANONICAL CACTVS 3.370 "CCN1CCN(CC1)c2ccc(Nc3cc(ncn3)N(C)C(=O)Nc4c(Cl)c(OC)cc(OC)c4Cl)cc2" 07J SMILES CACTVS 3.370 "CCN1CCN(CC1)c2ccc(Nc3cc(ncn3)N(C)C(=O)Nc4c(Cl)c(OC)cc(OC)c4Cl)cc2" 07J SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 "CCN1CCN(CC1)c2ccc(cc2)Nc3cc(ncn3)N(C)C(=O)Nc4c(c(cc(c4Cl)OC)OC)Cl" 07J SMILES "OpenEye OEToolkits" 1.7.2 "CCN1CCN(CC1)c2ccc(cc2)Nc3cc(ncn3)N(C)C(=O)Nc4c(c(cc(c4Cl)OC)OC)Cl" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 07J "SYSTEMATIC NAME" ACDLabs 12.01 "3-(2,6-dichloro-3,5-dimethoxyphenyl)-1-(6-{[4-(4-ethylpiperazin-1-yl)phenyl]amino}pyrimidin-4-yl)-1-methylurea" 07J "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 "3-[2,6-bis(chloranyl)-3,5-dimethoxy-phenyl]-1-[6-[[4-(4-ethylpiperazin-1-yl)phenyl]amino]pyrimidin-4-yl]-1-methyl-urea" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 07J "Create component" 2011-09-27 RCSB 07J "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 07J _pdbx_chem_comp_synonyms.name BGJ398 _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##