data_09X # _chem_comp.id 09X _chem_comp.name "2-bromanyl-N-[(2R,3R,4R,5S}-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]ethanamide" _chem_comp.type "L-saccharide, alpha linking" _chem_comp.pdbx_type ATOMS _chem_comp.formula "C7 H12 Br N O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-06-07 _chem_comp.pdbx_modified_date 2021-11-12 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 270.078 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 09X _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7EXW _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 09X C2 C1 C 0 1 N N R 2.277 21.165 14.759 -2.292 1.617 0.085 C2 09X 1 09X C3 C2 C 0 1 N N R 2.560 20.153 15.845 -3.362 0.667 -0.498 C3 09X 2 09X C4 C3 C 0 1 N N S 1.184 19.458 16.023 -2.794 -0.745 -0.233 C4 09X 3 09X C5 C4 C 0 1 N N N 1.200 18.032 16.553 -3.922 -1.712 0.133 C5 09X 4 09X CAH C5 C 0 1 N N N -0.627 21.809 11.412 2.210 0.064 -0.989 CAH 09X 5 09X CAG C6 C 0 1 N N N 0.089 20.619 11.984 1.123 0.264 0.035 CAG 09X 6 09X OAK O1 O 0 1 N N N 0.155 19.480 11.534 1.391 0.237 1.218 OAK 09X 7 09X NAF N1 N 0 1 N N N 0.663 21.034 13.080 -0.148 0.473 -0.363 NAF 09X 8 09X C1 C7 C 0 1 N N R 1.485 20.208 13.880 -1.205 0.667 0.633 C1 09X 9 09X O4 O2 O 0 1 N N N 0.641 19.400 14.719 -1.894 -0.577 0.884 O4 09X 10 09X O5 O3 O 0 1 N N N 2.057 17.246 15.728 -3.393 -3.034 0.260 O5 09X 11 09X O3 O4 O 0 1 N N N 3.049 20.797 17.000 -3.518 0.889 -1.901 O3 09X 12 09X O2 O5 O 0 1 N N N 3.379 21.816 14.101 -2.846 2.409 1.137 O2 09X 13 09X H1 H1 H 0 1 N N N 1.587 21.923 15.158 -1.882 2.256 -0.697 H1 09X 14 09X H2 H2 H 0 1 N N N 3.285 19.414 15.474 -4.313 0.800 0.018 H2 09X 15 09X H3 H3 H 0 1 N N N 0.556 20.079 16.678 -2.253 -1.107 -1.107 H3 09X 16 09X H4 H4 H 0 1 N N N 0.181 17.617 16.529 -4.369 -1.408 1.079 H4 09X 17 09X H5 H5 H 0 1 N N N 1.575 18.026 17.587 -4.681 -1.698 -0.649 H5 09X 18 09X BR BR BR 0 0 N N N -1.120 21.527 10.505 3.929 -0.212 -0.075 BR 09X 19 09X H7 H7 H 0 1 N N N -1.371 22.172 12.136 1.978 -0.809 -1.599 H7 09X 20 09X H8 H8 H 0 1 N N N 0.100 22.608 11.201 2.275 0.946 -1.627 H8 09X 21 09X H9 H9 H 0 1 N N N 0.514 21.980 13.367 -0.363 0.494 -1.308 H9 09X 22 09X H10 H10 H 0 1 N N N 2.165 19.591 13.274 -0.785 1.062 1.559 H10 09X 23 09X H11 H11 H 0 1 N Y N 2.075 16.352 16.050 -4.054 -3.701 0.491 H11 09X 24 09X H12 H12 H 0 1 N Y N 3.223 20.150 17.674 -3.815 1.781 -2.128 H12 09X 25 09X H13 H13 H 0 1 N Y N 3.819 22.393 14.715 -2.217 3.024 1.539 H13 09X 26 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 09X CAH CAG SING N N 1 09X OAK CAG DOUB N N 2 09X CAG NAF SING N N 3 09X NAF C1 SING N N 4 09X C1 O4 SING N N 5 09X C1 C2 SING N N 6 09X O2 C2 SING N N 7 09X O4 C4 SING N N 8 09X C2 C3 SING N N 9 09X O5 C5 SING N N 10 09X C3 C4 SING N N 11 09X C3 O3 SING N N 12 09X C4 C5 SING N N 13 09X C2 H1 SING N N 14 09X C3 H2 SING N N 15 09X C4 H3 SING N N 16 09X C5 H4 SING N N 17 09X C5 H5 SING N N 18 09X CAH BR SING N N 19 09X CAH H7 SING N N 20 09X CAH H8 SING N N 21 09X NAF H9 SING N N 22 09X C1 H10 SING N N 23 09X O5 H11 SING N N 24 09X O3 H12 SING N N 25 09X O2 H13 SING N N 26 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 09X InChI InChI 1.03 "InChI=1S/C7H12BrNO5/c8-1-4(11)9-7-6(13)5(12)3(2-10)14-7/h3,5-7,10,12-13H,1-2H2,(H,9,11)/t3-,5-,6+,7+/m0/s1" 09X InChIKey InChI 1.03 VXNDJHIRTVJHQB-DOAVWBMOSA-N 09X SMILES_CANONICAL CACTVS 3.385 "OC[C@@H]1O[C@@H](NC(=O)CBr)[C@H](O)[C@H]1O" 09X SMILES CACTVS 3.385 "OC[CH]1O[CH](NC(=O)CBr)[CH](O)[CH]1O" 09X SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C([C@H]1[C@@H]([C@H]([C@@H](O1)NC(=O)CBr)O)O)O" 09X SMILES "OpenEye OEToolkits" 2.0.7 "C(C1C(C(C(O1)NC(=O)CBr)O)O)O" # _pdbx_chem_comp_identifier.comp_id 09X _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-bromanyl-~{N}-[(2~{R},3~{R},4~{R},5~{S})-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]ethanamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 09X "Create component" 2021-06-07 PDBJ 09X "Initial release" 2021-11-17 RCSB ##