data_0AE # _chem_comp.id 0AE _chem_comp.name "(3~{R})-1-[6-[(phenylmethyl)amino]pyrimidin-4-yl]-3-[[[6-[[(3~{S})-3-propan-2-yl-2-azoniaspiro[3.3]heptan-2-yl]methyl]naphthalen-1-yl]amino]methyl]piperidin-3-ol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C37 H47 N6 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 2021-06-03 _chem_comp.pdbx_modified_date 2021-10-15 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 591.809 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 0AE _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7OQL _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 0AE C10 C1 C 0 1 Y N N 14.037 -22.434 -13.369 -2.590 -1.154 -1.180 C10 0AE 1 0AE N12 N1 N 0 1 N N N 12.917 -21.232 -11.337 -0.468 -2.046 -0.391 N12 0AE 2 0AE C13 C2 C 0 1 N N N 11.787 -21.084 -10.397 0.975 -2.231 -0.565 C13 0AE 3 0AE C15 C3 C 0 1 N N N 9.808 -20.673 -11.735 1.158 -2.352 1.925 C15 0AE 4 0AE C17 C4 C 0 1 N N N 9.665 -18.664 -13.297 3.319 -1.107 1.816 C17 0AE 5 0AE C20 C5 C 0 1 Y N N 10.236 -16.639 -11.832 4.991 -1.798 0.311 C20 0AE 6 0AE C22 C6 C 0 1 Y N N 9.926 -15.022 -9.921 6.913 -2.990 -0.133 C22 0AE 7 0AE C24 C7 C 0 1 Y N N 9.154 -14.306 -12.251 7.097 -0.701 0.057 C24 0AE 8 0AE C26 C8 C 0 1 N N N 7.918 -13.632 -14.526 7.262 1.755 0.266 C26 0AE 9 0AE C28 C9 C 0 1 Y N N 5.769 -14.590 -13.204 8.602 3.432 -1.021 C28 0AE 10 0AE C01 C10 C 0 1 N N N 22.061 -22.489 -17.188 -10.349 0.677 1.993 C01 0AE 11 0AE C02 C11 C 0 1 N N N 20.742 -21.948 -16.615 -8.834 0.580 1.806 C02 0AE 12 0AE C03 C12 C 0 1 N N N 20.193 -20.773 -17.478 -8.365 -0.832 2.164 C03 0AE 13 0AE C04 C13 C 0 1 N N S 19.687 -23.090 -16.441 -8.480 0.880 0.348 C04 0AE 14 0AE C06 C14 C 0 1 N N N 17.591 -22.759 -16.380 -6.805 -0.564 -0.734 C06 0AE 15 0AE C07 C15 C 0 1 Y N N 16.372 -22.640 -15.386 -5.321 -0.760 -0.902 C07 0AE 16 0AE C08 C16 C 0 1 Y N N 16.383 -21.537 -14.277 -4.611 -1.484 0.054 C08 0AE 17 0AE C09 C17 C 0 1 Y N N 15.206 -21.430 -13.260 -3.269 -1.679 -0.069 C09 0AE 18 0AE C11 C18 C 0 1 Y N N 12.858 -22.310 -12.364 -1.199 -1.336 -1.341 C11 0AE 19 0AE C14 C19 C 0 1 N N R 10.812 -20.000 -10.950 1.531 -3.040 0.609 C14 0AE 20 0AE C16 C20 C 0 1 N N N 8.970 -19.846 -12.600 1.803 -0.965 1.968 C16 0AE 21 0AE C18 C21 C 0 1 N N N 11.611 -18.939 -11.749 3.055 -3.122 0.496 C18 0AE 22 0AE C27 C22 C 0 1 Y N N 6.566 -14.389 -14.513 8.319 2.827 0.189 C27 0AE 23 0AE C29 C23 C 0 1 Y N N 4.443 -15.340 -13.216 9.575 4.411 -1.093 C29 0AE 24 0AE C30 C24 C 0 1 Y N N 3.899 -15.894 -14.499 10.261 4.789 0.047 C30 0AE 25 0AE C31 C25 C 0 1 Y N N 4.692 -15.699 -15.794 9.972 4.189 1.258 C31 0AE 26 0AE C32 C26 C 0 1 Y N N 6.022 -14.949 -15.796 9.003 3.205 1.329 C32 0AE 27 0AE C33 C27 C 0 1 Y N N 9.620 -15.655 -12.765 5.730 -0.619 0.299 C33 0AE 28 0AE C35 C28 C 0 1 Y N N 11.659 -23.289 -12.436 -0.571 -0.804 -2.447 C35 0AE 29 0AE C36 C29 C 0 1 Y N N 11.609 -24.396 -13.531 -1.292 -0.093 -3.402 C36 0AE 30 0AE C37 C30 C 0 1 Y N N 12.782 -24.505 -14.547 -2.634 0.097 -3.271 C37 0AE 31 0AE C38 C31 C 0 1 Y N N 13.998 -23.515 -14.462 -3.311 -0.424 -2.155 C38 0AE 32 0AE C39 C32 C 0 1 Y N N 15.185 -23.623 -15.490 -4.696 -0.242 -1.995 C39 0AE 33 0AE C40 C33 C 0 1 N N N 18.678 -23.786 -14.879 -7.107 1.878 -0.812 C40 0AE 34 0AE C41 C34 C 0 1 N N N 20.059 -23.840 -15.299 -8.252 2.361 0.070 C41 0AE 35 0AE C42 C35 C 0 1 N N N 20.910 -24.018 -14.010 -8.037 3.371 1.194 C42 0AE 36 0AE C43 C36 C 0 1 N N N 21.044 -25.508 -14.344 -9.499 3.798 0.970 C43 0AE 37 0AE C44 C37 C 0 1 N N N 20.475 -25.256 -15.745 -9.361 3.262 -0.468 C44 0AE 38 0AE N05 N2 N 1 1 N N N 18.496 -22.690 -15.751 -7.054 0.665 0.031 N05 0AE 39 0AE N19 N3 N 0 1 N N N 10.670 -17.938 -12.423 3.624 -1.770 0.541 N19 0AE 40 0AE N21 N4 N 0 1 Y N N 10.396 -16.353 -10.430 5.615 -2.954 0.092 N21 0AE 41 0AE N23 N5 N 0 1 Y N N 9.318 -14.008 -10.852 7.647 -1.896 -0.152 N23 0AE 42 0AE N25 N6 N 0 1 N N N 8.514 -13.303 -13.190 7.877 0.445 0.034 N25 0AE 43 0AE O34 O1 O 0 1 N N N 10.179 -19.331 -9.829 0.978 -4.357 0.585 O34 0AE 44 0AE H1 H1 H 0 1 N N N 11.257 -22.043 -10.302 1.163 -2.766 -1.496 H1 0AE 45 0AE H2 H2 H 0 1 N N N 12.164 -20.774 -9.411 1.464 -1.258 -0.600 H2 0AE 46 0AE H3 H3 H 0 1 N N N 9.142 -21.202 -11.037 0.074 -2.252 1.990 H3 0AE 47 0AE H4 H4 H 0 1 N N N 10.324 -21.404 -12.375 1.519 -2.949 2.763 H4 0AE 48 0AE H5 H5 H 0 1 N N N 10.191 -19.046 -14.185 3.781 -0.120 1.832 H5 0AE 49 0AE H6 H6 H 0 1 N N N 8.894 -17.944 -13.609 3.712 -1.705 2.639 H6 0AE 50 0AE H7 H7 H 0 1 N N N 10.026 -14.788 -8.871 7.389 -3.944 -0.306 H7 0AE 51 0AE H8 H8 H 0 1 N N N 8.644 -14.253 -15.072 6.800 1.770 1.253 H8 0AE 52 0AE H9 H9 H 0 1 N N N 7.766 -12.686 -15.066 6.502 1.939 -0.493 H9 0AE 53 0AE H10 H10 H 0 1 N N N 6.155 -14.196 -12.275 8.067 3.136 -1.911 H10 0AE 54 0AE H11 H11 H 0 1 N N N 22.423 -23.316 -16.559 -10.836 -0.125 1.439 H11 0AE 55 0AE H12 H12 H 0 1 N N N 21.893 -22.854 -18.212 -10.590 0.585 3.052 H12 0AE 56 0AE H13 H13 H 0 1 N N N 22.811 -21.685 -17.204 -10.700 1.640 1.623 H13 0AE 57 0AE H14 H14 H 0 1 N N N 20.955 -21.546 -15.613 -8.340 1.303 2.456 H14 0AE 58 0AE H15 H15 H 0 1 N N N 19.251 -20.408 -17.044 -7.275 -0.867 2.151 H15 0AE 59 0AE H16 H16 H 0 1 N N N 20.929 -19.956 -17.496 -8.725 -1.093 3.159 H16 0AE 60 0AE H17 H17 H 0 1 N N N 20.012 -21.125 -18.504 -8.760 -1.541 1.437 H17 0AE 61 0AE H18 H18 H 0 1 N N N 19.525 -23.671 -17.361 -9.160 0.403 -0.358 H18 0AE 62 0AE H19 H19 H 0 1 N N N 17.570 -21.939 -17.113 -7.275 -0.484 -1.714 H19 0AE 63 0AE H20 H20 H 0 1 N N N 17.563 -23.724 -16.908 -7.226 -1.416 -0.198 H20 0AE 64 0AE H21 H21 H 0 1 N N N 17.210 -20.846 -14.215 -5.133 -1.896 0.905 H21 0AE 65 0AE H22 H22 H 0 1 N N N 15.208 -20.669 -12.494 -2.730 -2.234 0.684 H22 0AE 66 0AE H23 H23 H 0 1 N N N 8.153 -19.439 -11.985 1.412 -0.356 1.153 H23 0AE 67 0AE H24 H24 H 0 1 N N N 8.551 -20.497 -13.382 1.577 -0.487 2.921 H24 0AE 68 0AE H25 H25 H 0 1 N N N 12.210 -19.445 -12.520 3.449 -3.710 1.325 H25 0AE 69 0AE H26 H26 H 0 1 N N N 12.279 -18.399 -11.062 3.324 -3.598 -0.447 H26 0AE 70 0AE H27 H27 H 0 1 N N N 3.892 -15.473 -12.297 9.800 4.881 -2.039 H27 0AE 71 0AE H28 H28 H 0 1 N N N 2.958 -16.425 -14.509 11.021 5.554 -0.009 H28 0AE 72 0AE H29 H29 H 0 1 N N N 4.305 -16.098 -16.720 10.508 4.484 2.148 H29 0AE 73 0AE H30 H30 H 0 1 N N N 6.570 -14.822 -16.718 8.778 2.736 2.275 H30 0AE 74 0AE H31 H31 H 0 1 N N N 9.505 -15.902 -13.810 5.254 0.335 0.472 H31 0AE 75 0AE H32 H32 H 0 1 N N N 10.853 -23.203 -11.722 0.493 -0.941 -2.574 H32 0AE 76 0AE H33 H33 H 0 1 N N N 10.773 -25.077 -13.584 -0.779 0.314 -4.260 H33 0AE 77 0AE H34 H34 H 0 1 N N N 12.760 -25.265 -15.314 -3.175 0.656 -4.020 H34 0AE 78 0AE H36 H36 H 0 1 N N N 15.170 -24.378 -16.262 -5.259 0.317 -2.728 H36 0AE 79 0AE H37 H37 H 0 1 N N N 18.535 -23.549 -13.814 -7.404 1.679 -1.841 H37 0AE 80 0AE H38 H38 H 0 1 N N N 18.088 -24.677 -15.139 -6.213 2.497 -0.742 H38 0AE 81 0AE H39 H39 H 0 1 N N N 21.861 -23.465 -14.014 -7.859 2.912 2.166 H39 0AE 82 0AE H40 H40 H 0 1 N N N 20.368 -23.809 -13.076 -7.311 4.147 0.952 H40 0AE 83 0AE H41 H41 H 0 1 N N N 20.421 -26.165 -13.719 -10.214 3.241 1.575 H41 0AE 84 0AE H42 H42 H 0 1 N N N 22.081 -25.876 -14.342 -9.651 4.876 1.021 H42 0AE 85 0AE H43 H43 H 0 1 N N N 19.633 -25.910 -16.015 -9.011 4.009 -1.181 H43 0AE 86 0AE H44 H44 H 0 1 N N N 21.226 -25.274 -16.548 -10.237 2.717 -0.818 H44 0AE 87 0AE H46 H46 H 0 1 N N N 9.222 -12.622 -13.375 8.830 0.380 -0.135 H46 0AE 88 0AE H47 H47 H 0 1 N N N 9.682 -19.962 -9.322 0.013 -4.380 0.655 H47 0AE 89 0AE H48 H48 H 0 1 N N N 13.737 -21.393 -10.788 -0.914 -2.419 0.385 H48 0AE 90 0AE H35 H35 H 0 1 N N N 18.646 -21.827 -15.269 -6.447 0.759 0.831 H35 0AE 91 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 0AE C03 C02 SING N N 1 0AE C01 C02 SING N N 2 0AE C02 C04 SING N N 3 0AE C04 N05 SING N N 4 0AE C04 C41 SING N N 5 0AE C06 N05 SING N N 6 0AE C06 C07 SING N N 7 0AE C32 C31 DOUB Y N 8 0AE C32 C27 SING Y N 9 0AE C31 C30 SING Y N 10 0AE N05 C40 SING N N 11 0AE C44 C41 SING N N 12 0AE C44 C43 SING N N 13 0AE C39 C07 DOUB Y N 14 0AE C39 C38 SING Y N 15 0AE C07 C08 SING Y N 16 0AE C41 C40 SING N N 17 0AE C41 C42 SING N N 18 0AE C37 C38 SING Y N 19 0AE C37 C36 DOUB Y N 20 0AE C26 C27 SING N N 21 0AE C26 N25 SING N N 22 0AE C27 C28 DOUB Y N 23 0AE C30 C29 DOUB Y N 24 0AE C38 C10 DOUB Y N 25 0AE C43 C42 SING N N 26 0AE C08 C09 DOUB Y N 27 0AE C36 C35 SING Y N 28 0AE C10 C09 SING Y N 29 0AE C10 C11 SING Y N 30 0AE C17 C16 SING N N 31 0AE C17 N19 SING N N 32 0AE C29 C28 SING Y N 33 0AE N25 C24 SING N N 34 0AE C33 C24 DOUB Y N 35 0AE C33 C20 SING Y N 36 0AE C16 C15 SING N N 37 0AE C35 C11 DOUB Y N 38 0AE N19 C20 SING N N 39 0AE N19 C18 SING N N 40 0AE C11 N12 SING N N 41 0AE C24 N23 SING Y N 42 0AE C20 N21 DOUB Y N 43 0AE C18 C14 SING N N 44 0AE C15 C14 SING N N 45 0AE N12 C13 SING N N 46 0AE C14 C13 SING N N 47 0AE C14 O34 SING N N 48 0AE N23 C22 DOUB Y N 49 0AE N21 C22 SING Y N 50 0AE C13 H1 SING N N 51 0AE C13 H2 SING N N 52 0AE C15 H3 SING N N 53 0AE C15 H4 SING N N 54 0AE C17 H5 SING N N 55 0AE C17 H6 SING N N 56 0AE C22 H7 SING N N 57 0AE C26 H8 SING N N 58 0AE C26 H9 SING N N 59 0AE C28 H10 SING N N 60 0AE C01 H11 SING N N 61 0AE C01 H12 SING N N 62 0AE C01 H13 SING N N 63 0AE C02 H14 SING N N 64 0AE C03 H15 SING N N 65 0AE C03 H16 SING N N 66 0AE C03 H17 SING N N 67 0AE C04 H18 SING N N 68 0AE C06 H19 SING N N 69 0AE C06 H20 SING N N 70 0AE C08 H21 SING N N 71 0AE C09 H22 SING N N 72 0AE C16 H23 SING N N 73 0AE C16 H24 SING N N 74 0AE C18 H25 SING N N 75 0AE C18 H26 SING N N 76 0AE C29 H27 SING N N 77 0AE C30 H28 SING N N 78 0AE C31 H29 SING N N 79 0AE C32 H30 SING N N 80 0AE C33 H31 SING N N 81 0AE C35 H32 SING N N 82 0AE C36 H33 SING N N 83 0AE C37 H34 SING N N 84 0AE C39 H36 SING N N 85 0AE C40 H37 SING N N 86 0AE C40 H38 SING N N 87 0AE C42 H39 SING N N 88 0AE C42 H40 SING N N 89 0AE C43 H41 SING N N 90 0AE C43 H42 SING N N 91 0AE C44 H43 SING N N 92 0AE C44 H44 SING N N 93 0AE N25 H46 SING N N 94 0AE O34 H47 SING N N 95 0AE N12 H48 SING N N 96 0AE N05 H35 SING N N 97 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 0AE InChI InChI 1.03 "InChI=1S/C37H46N6O/c1-27(2)35-36(15-7-16-36)24-43(35)22-29-13-14-31-30(19-29)11-6-12-32(31)39-23-37(44)17-8-18-42(25-37)34-20-33(40-26-41-34)38-21-28-9-4-3-5-10-28/h3-6,9-14,19-20,26-27,35,39,44H,7-8,15-18,21-25H2,1-2H3,(H,38,40,41)/p+1/t35-,37+/m0/s1" 0AE InChIKey InChI 1.03 DAMVLLAQUZPVCW-YBZKQSBQSA-O 0AE SMILES_CANONICAL CACTVS 3.385 "CC(C)[C@@H]1[NH+](Cc2ccc3c(NC[C@]4(O)CCCN(C4)c5cc(NCc6ccccc6)ncn5)cccc3c2)CC17CCC7" 0AE SMILES CACTVS 3.385 "CC(C)[CH]1[NH+](Cc2ccc3c(NC[C]4(O)CCCN(C4)c5cc(NCc6ccccc6)ncn5)cccc3c2)CC17CCC7" 0AE SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)[C@H]1C2(CCC2)C[NH+]1Cc3ccc4c(c3)cccc4NC[C@@]5(CCCN(C5)c6cc(ncn6)NCc7ccccc7)O" 0AE SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)C1C2(CCC2)C[NH+]1Cc3ccc4c(c3)cccc4NCC5(CCCN(C5)c6cc(ncn6)NCc7ccccc7)O" # _pdbx_chem_comp_identifier.comp_id 0AE _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(3~{R})-1-[6-[(phenylmethyl)amino]pyrimidin-4-yl]-3-[[[6-[[(3~{S})-3-propan-2-yl-2-azoniaspiro[3.3]heptan-2-yl]methyl]naphthalen-1-yl]amino]methyl]piperidin-3-ol" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 0AE "Create component" 2021-06-03 PDBE 0AE "Initial release" 2021-10-20 RCSB ##