data_0AX # _chem_comp.id 0AX _chem_comp.name "N-[(2S)-3-cyclohexyl-1-oxidanylidene-1-[[(2S,3R)-3-oxidanyl-4-oxidanylidene-1-[(3S)-2-oxidanylidenepiperidin-3-yl]-4-[(phenylmethyl)amino]butan-2-yl]amino]propan-2-yl]-1-benzofuran-2-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C34 H42 N4 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-09-29 _chem_comp.pdbx_modified_date 2023-09-22 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 602.720 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 0AX _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8GXH _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBC # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 0AX C02 C1 C 0 1 N N N 8.260 14.300 22.439 0.226 -0.433 -0.947 C02 0AX 1 0AX C03 C2 C 0 1 N N S 7.440 13.792 23.624 -1.104 0.202 -1.264 C03 0AX 2 0AX C04 C3 C 0 1 N N N 7.785 14.785 24.714 -1.027 1.707 -1.000 C04 0AX 3 0AX C05 C4 C 0 1 N N N 6.885 14.654 25.918 -2.334 2.369 -1.439 C05 0AX 4 0AX C06 C5 C 0 1 N N N 5.446 14.896 25.487 -2.492 2.231 -2.954 C06 0AX 5 0AX C07 C6 C 0 1 N N N 4.521 15.084 26.686 -3.800 2.894 -3.393 C07 0AX 6 0AX C08 C7 C 0 1 N N N 5.030 16.199 27.603 -3.772 4.376 -3.016 C08 0AX 7 0AX C09 C8 C 0 1 N N N 6.430 15.879 28.106 -3.614 4.514 -1.500 C09 0AX 8 0AX C10 C9 C 0 1 N N N 7.374 15.718 26.916 -2.307 3.852 -1.062 C10 0AX 9 0AX C12 C10 C 0 1 N N N 7.956 11.429 23.075 -3.427 -0.384 -0.821 C12 0AX 10 0AX C13 C11 C 0 1 Y N N 8.701 10.229 23.611 -4.468 -0.978 0.030 C13 0AX 11 0AX C14 C12 C 0 1 Y N N 9.038 9.008 23.022 -5.790 -1.033 -0.277 C14 0AX 12 0AX C15 C13 C 0 1 Y N N 9.832 8.296 24.017 -6.439 -1.704 0.849 C15 0AX 13 0AX C16 C14 C 0 1 Y N N 10.463 7.038 24.102 -7.758 -2.062 1.141 C16 0AX 14 0AX C17 C15 C 0 1 Y N N 11.172 6.690 25.260 -8.042 -2.700 2.316 C17 0AX 15 0AX C18 C16 C 0 1 Y N N 11.264 7.566 26.343 -7.030 -2.994 3.219 C18 0AX 16 0AX C19 C17 C 0 1 Y N N 10.649 8.799 26.272 -5.723 -2.649 2.950 C19 0AX 17 0AX C20 C18 C 0 1 Y N N 9.935 9.153 25.093 -5.409 -2.001 1.762 C20 0AX 18 0AX C24 C19 C 0 1 N N S 8.273 15.442 20.222 2.642 -0.578 -1.226 C24 0AX 19 0AX C25 C20 C 0 1 N N N 7.851 14.698 18.955 2.907 -1.875 -1.995 C25 0AX 20 0AX C26 C21 C 0 1 N N S 8.360 13.216 19.037 4.233 -2.481 -1.531 C26 0AX 21 0AX C27 C22 C 0 1 N N N 9.783 13.190 19.086 4.591 -3.667 -2.430 C27 0AX 22 0AX C28 C23 C 0 1 N N N 10.373 11.867 18.905 5.762 -4.423 -1.790 C28 0AX 23 0AX C29 C24 C 0 1 N N N 10.159 11.351 17.525 5.275 -5.074 -0.494 C29 0AX 24 0AX C31 C25 C 0 1 N N N 7.774 12.455 17.750 4.100 -2.940 -0.107 C31 0AX 25 0AX C33 C26 C 0 1 N N R 7.874 16.894 20.351 3.730 0.444 -1.561 C33 0AX 26 0AX C35 C27 C 0 1 N N N 8.838 17.782 19.589 3.469 1.721 -0.804 C35 0AX 27 0AX C37 C28 C 0 1 N N N 10.629 19.525 19.772 3.282 2.973 1.278 C37 0AX 28 0AX C38 C29 C 0 1 Y N N 11.960 18.739 19.867 3.417 2.717 2.757 C38 0AX 29 0AX C39 C30 C 0 1 Y N N 12.018 17.571 20.641 4.643 2.872 3.376 C39 0AX 30 0AX C40 C31 C 0 1 Y N N 13.200 16.832 20.750 4.768 2.637 4.732 C40 0AX 31 0AX C41 C32 C 0 1 Y N N 14.343 17.246 20.086 3.666 2.246 5.470 C41 0AX 32 0AX C42 C33 C 0 1 Y N N 14.298 18.401 19.306 2.439 2.091 4.851 C42 0AX 33 0AX C43 C34 C 0 1 Y N N 13.116 19.149 19.201 2.314 2.331 3.496 C43 0AX 34 0AX N11 N1 N 0 1 N N N 8.013 12.542 23.985 -2.142 -0.390 -0.416 N11 0AX 35 0AX N23 N2 N 0 1 N N N 7.534 14.904 21.363 1.333 -0.043 -1.609 N23 0AX 36 0AX N30 N3 N 0 1 N N N 8.736 11.542 17.024 4.592 -4.095 0.342 N30 0AX 37 0AX N36 N4 N 0 1 N N N 9.635 18.680 20.409 3.535 1.732 0.542 N36 0AX 38 0AX O01 O1 O 0 1 N N N 9.444 14.237 22.390 0.300 -1.291 -0.093 O01 0AX 39 0AX O21 O2 O 0 1 Y N N 9.265 10.299 24.814 -4.254 -1.555 1.231 O21 0AX 40 0AX O22 O3 O 0 1 N N N 7.443 11.532 22.004 -3.726 0.113 -1.890 O22 0AX 41 0AX O32 O4 O 0 1 N N N 6.656 12.616 17.423 3.515 -2.222 0.675 O32 0AX 42 0AX O34 O5 O 0 1 N N N 7.863 17.271 21.729 3.716 0.712 -2.965 O34 0AX 43 0AX O44 O6 O 0 1 N N N 8.975 17.725 18.424 3.200 2.739 -1.406 O44 0AX 44 0AX H1 H1 H 0 1 N N N 6.362 13.753 23.407 -1.349 0.029 -2.312 H1 0AX 45 0AX H2 H2 H 0 1 N N N 8.825 14.615 25.030 -0.870 1.882 0.064 H2 0AX 46 0AX H3 H3 H 0 1 N N N 7.687 15.803 24.309 -0.197 2.132 -1.564 H3 0AX 47 0AX H4 H4 H 0 1 N N N 6.984 13.652 26.361 -3.173 1.883 -0.940 H4 0AX 48 0AX H5 H5 H 0 1 N N N 5.408 15.801 24.863 -1.654 2.717 -3.453 H5 0AX 49 0AX H6 H6 H 0 1 N N N 5.099 14.032 24.901 -2.512 1.175 -3.223 H6 0AX 50 0AX H7 H7 H 0 1 N N N 3.515 15.345 26.326 -3.912 2.796 -4.473 H7 0AX 51 0AX H8 H8 H 0 1 N N N 4.474 14.144 27.255 -4.639 2.408 -2.895 H8 0AX 52 0AX H9 H9 H 0 1 N N N 5.054 17.145 27.043 -2.934 4.862 -3.514 H9 0AX 53 0AX H10 H10 H 0 1 N N N 4.351 16.299 28.462 -4.704 4.848 -3.329 H10 0AX 54 0AX H11 H11 H 0 1 N N N 6.407 14.944 28.685 -3.594 5.570 -1.232 H11 0AX 55 0AX H12 H12 H 0 1 N N N 6.785 16.699 28.748 -4.453 4.028 -1.002 H12 0AX 56 0AX H13 H13 H 0 1 N N N 8.366 15.423 27.289 -2.194 3.950 0.018 H13 0AX 57 0AX H14 H14 H 0 1 N N N 7.451 16.683 26.394 -1.468 4.338 -1.560 H14 0AX 58 0AX H15 H15 H 0 1 N N N 8.767 8.663 22.035 -6.266 -0.658 -1.171 H15 0AX 59 0AX H16 H16 H 0 1 N N N 10.400 6.344 23.277 -8.549 -1.834 0.442 H16 0AX 60 0AX H17 H17 H 0 1 N N N 11.656 5.726 25.315 -9.061 -2.976 2.543 H17 0AX 61 0AX H18 H18 H 0 1 N N N 11.812 7.281 27.229 -7.270 -3.498 4.144 H18 0AX 62 0AX H19 H19 H 0 1 N N N 10.709 9.488 27.102 -4.945 -2.883 3.661 H19 0AX 63 0AX H20 H20 H 0 1 N N N 9.357 15.334 20.374 2.652 -0.782 -0.155 H20 0AX 64 0AX H21 H21 H 0 1 N N N 8.290 15.190 18.075 2.098 -2.581 -1.806 H21 0AX 65 0AX H22 H22 H 0 1 N N N 6.754 14.707 18.871 2.959 -1.660 -3.062 H22 0AX 66 0AX H23 H23 H 0 1 N N N 7.933 12.748 19.936 5.018 -1.727 -1.595 H23 0AX 67 0AX H24 H24 H 0 1 N N N 10.100 13.576 20.066 3.732 -4.331 -2.521 H24 0AX 68 0AX H25 H25 H 0 1 N N N 10.166 13.848 18.292 4.883 -3.305 -3.416 H25 0AX 69 0AX H26 H26 H 0 1 N N N 9.912 11.171 19.621 6.118 -5.193 -2.474 H26 0AX 70 0AX H27 H27 H 0 1 N N N 11.454 11.930 19.098 6.571 -3.726 -1.570 H27 0AX 71 0AX H28 H28 H 0 1 N N N 10.391 10.276 17.515 4.588 -5.885 -0.735 H28 0AX 72 0AX H29 H29 H 0 1 N N N 10.842 11.880 16.845 6.130 -5.475 0.050 H29 0AX 73 0AX H30 H30 H 0 1 N N N 6.869 17.021 19.923 4.703 0.045 -1.276 H30 0AX 74 0AX H31 H31 H 0 1 N N N 10.712 20.487 20.300 2.273 3.324 1.061 H31 0AX 75 0AX H32 H32 H 0 1 N N N 10.363 19.706 18.720 4.004 3.730 0.973 H32 0AX 76 0AX H33 H33 H 0 1 N N N 11.133 17.236 21.162 5.504 3.177 2.799 H33 0AX 77 0AX H34 H34 H 0 1 N N N 13.222 15.936 21.353 5.726 2.758 5.216 H34 0AX 78 0AX H35 H35 H 0 1 N N N 15.259 16.680 20.171 3.763 2.062 6.530 H35 0AX 79 0AX H36 H36 H 0 1 N N N 15.183 18.723 18.777 1.579 1.785 5.427 H36 0AX 80 0AX H37 H37 H 0 1 N N N 13.100 20.047 18.601 1.356 2.210 3.012 H37 0AX 81 0AX H38 H38 H 0 1 N N N 8.457 12.436 24.875 -1.904 -0.786 0.437 H38 0AX 82 0AX H39 H39 H 0 1 N N N 6.536 14.957 21.391 1.264 0.593 -2.338 H39 0AX 83 0AX H40 H40 H 0 1 N N N 8.432 11.057 16.204 4.488 -4.297 1.286 H40 0AX 84 0AX H41 H41 H 0 1 N N N 9.500 18.715 21.399 3.750 0.918 1.024 H41 0AX 85 0AX H42 H42 H 0 1 N N N 7.259 16.714 22.205 2.878 1.069 -3.289 H42 0AX 86 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 0AX N30 C29 SING N N 1 0AX N30 C31 SING N N 2 0AX O32 C31 DOUB N N 3 0AX C29 C28 SING N N 4 0AX C31 C26 SING N N 5 0AX O44 C35 DOUB N N 6 0AX C28 C27 SING N N 7 0AX C25 C26 SING N N 8 0AX C25 C24 SING N N 9 0AX C26 C27 SING N N 10 0AX C43 C42 DOUB Y N 11 0AX C43 C38 SING Y N 12 0AX C42 C41 SING Y N 13 0AX C35 C33 SING N N 14 0AX C35 N36 SING N N 15 0AX C37 C38 SING N N 16 0AX C37 N36 SING N N 17 0AX C38 C39 DOUB Y N 18 0AX C41 C40 DOUB Y N 19 0AX C24 C33 SING N N 20 0AX C24 N23 SING N N 21 0AX C33 O34 SING N N 22 0AX C39 C40 SING Y N 23 0AX N23 C02 SING N N 24 0AX O22 C12 DOUB N N 25 0AX O01 C02 DOUB N N 26 0AX C02 C03 SING N N 27 0AX C14 C13 DOUB Y N 28 0AX C14 C15 SING Y N 29 0AX C12 C13 SING N N 30 0AX C12 N11 SING N N 31 0AX C13 O21 SING Y N 32 0AX C03 N11 SING N N 33 0AX C03 C04 SING N N 34 0AX C15 C16 DOUB Y N 35 0AX C15 C20 SING Y N 36 0AX C16 C17 SING Y N 37 0AX C04 C05 SING N N 38 0AX O21 C20 SING Y N 39 0AX C20 C19 DOUB Y N 40 0AX C17 C18 DOUB Y N 41 0AX C06 C05 SING N N 42 0AX C06 C07 SING N N 43 0AX C05 C10 SING N N 44 0AX C19 C18 SING Y N 45 0AX C07 C08 SING N N 46 0AX C10 C09 SING N N 47 0AX C08 C09 SING N N 48 0AX C03 H1 SING N N 49 0AX C04 H2 SING N N 50 0AX C04 H3 SING N N 51 0AX C05 H4 SING N N 52 0AX C06 H5 SING N N 53 0AX C06 H6 SING N N 54 0AX C07 H7 SING N N 55 0AX C07 H8 SING N N 56 0AX C08 H9 SING N N 57 0AX C08 H10 SING N N 58 0AX C09 H11 SING N N 59 0AX C09 H12 SING N N 60 0AX C10 H13 SING N N 61 0AX C10 H14 SING N N 62 0AX C14 H15 SING N N 63 0AX C16 H16 SING N N 64 0AX C17 H17 SING N N 65 0AX C18 H18 SING N N 66 0AX C19 H19 SING N N 67 0AX C24 H20 SING N N 68 0AX C25 H21 SING N N 69 0AX C25 H22 SING N N 70 0AX C26 H23 SING N N 71 0AX C27 H24 SING N N 72 0AX C27 H25 SING N N 73 0AX C28 H26 SING N N 74 0AX C28 H27 SING N N 75 0AX C29 H28 SING N N 76 0AX C29 H29 SING N N 77 0AX C33 H30 SING N N 78 0AX C37 H31 SING N N 79 0AX C37 H32 SING N N 80 0AX C39 H33 SING N N 81 0AX C40 H34 SING N N 82 0AX C41 H35 SING N N 83 0AX C42 H36 SING N N 84 0AX C43 H37 SING N N 85 0AX N11 H38 SING N N 86 0AX N23 H39 SING N N 87 0AX N30 H40 SING N N 88 0AX N36 H41 SING N N 89 0AX O34 H42 SING N N 90 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 0AX InChI InChI 1.06 "InChI=1S/C34H42N4O6/c39-30(34(43)36-21-23-12-5-2-6-13-23)26(19-25-15-9-17-35-31(25)40)37-32(41)27(18-22-10-3-1-4-11-22)38-33(42)29-20-24-14-7-8-16-28(24)44-29/h2,5-8,12-14,16,20,22,25-27,30,39H,1,3-4,9-11,15,17-19,21H2,(H,35,40)(H,36,43)(H,37,41)(H,38,42)/t25-,26-,27-,30+/m0/s1" 0AX InChIKey InChI 1.06 QBWBVQMSMXVSSF-NJBJSMFESA-N 0AX SMILES_CANONICAL CACTVS 3.385 "O[C@H]([C@H](C[C@@H]1CCCNC1=O)NC(=O)[C@H](CC2CCCCC2)NC(=O)c3oc4ccccc4c3)C(=O)NCc5ccccc5" 0AX SMILES CACTVS 3.385 "O[CH]([CH](C[CH]1CCCNC1=O)NC(=O)[CH](CC2CCCCC2)NC(=O)c3oc4ccccc4c3)C(=O)NCc5ccccc5" 0AX SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)CNC(=O)[C@@H]([C@H](C[C@@H]2CCCNC2=O)NC(=O)[C@H](CC3CCCCC3)NC(=O)c4cc5ccccc5o4)O" 0AX SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)CNC(=O)C(C(CC2CCCNC2=O)NC(=O)C(CC3CCCCC3)NC(=O)c4cc5ccccc5o4)O" # _pdbx_chem_comp_identifier.comp_id 0AX _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[(2~{S})-3-cyclohexyl-1-oxidanylidene-1-[[(2~{S},3~{R})-3-oxidanyl-4-oxidanylidene-1-[(3~{S})-2-oxidanylidenepiperidin-3-yl]-4-[(phenylmethyl)amino]butan-2-yl]amino]propan-2-yl]-1-benzofuran-2-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 0AX "Create component" 2022-09-29 PDBC 0AX "Initial release" 2023-09-27 RCSB #