data_0B1 # _chem_comp.id 0B1 _chem_comp.name "2-amino-6-[(1S,2R)-2-(3'-methoxybiphenyl-3-yl)cyclopropyl]-3-methylpyrimidin-4(3H)-one" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H21 N3 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2012-07-26 _chem_comp.pdbx_modified_date 2020-06-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 347.410 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 0B1 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3VV7 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 0B1 O1 O1 O 0 1 N N N -15.919 -42.568 -10.506 3.856 2.083 -2.422 O1 0B1 1 0B1 C1 C1 C 0 1 N N N -15.908 -41.571 -9.739 3.648 1.345 -1.473 C1 0B1 2 0B1 N2 N2 N 0 1 N N N -15.503 -41.734 -8.389 3.675 1.822 -0.210 N2 0B1 3 0B1 C5 C5 C 0 1 N N N -15.122 -43.076 -7.924 3.955 3.240 0.034 C5 0B1 4 0B1 C4 C4 C 0 1 N N N -15.495 -40.598 -7.526 3.441 0.983 0.835 C4 0B1 5 0B1 N3 N3 N 0 1 N N N -15.109 -40.746 -6.217 3.469 1.475 2.112 N3 0B1 6 0B1 N1 N1 N 0 1 N N N -15.876 -39.370 -8.019 3.187 -0.295 0.638 N1 0B1 7 0B1 C3 C3 C 0 1 N N N -16.278 -39.202 -9.320 3.149 -0.814 -0.587 C3 0B1 8 0B1 C2 C2 C 0 1 N N N -16.289 -40.304 -10.198 3.371 -0.019 -1.674 C2 0B1 9 0B1 C6 C6 C 0 1 N N S -16.670 -37.858 -9.834 2.856 -2.280 -0.775 C6 0B1 10 0B1 C21 C21 C 0 1 N N N -17.580 -37.991 -11.069 2.810 -3.157 0.478 C21 0B1 11 0B1 C7 C7 C 0 1 N N R -18.154 -37.434 -9.769 1.515 -2.804 -0.256 C7 0B1 12 0B1 C8 C8 C 0 1 Y N N -19.179 -38.320 -9.124 0.589 -1.815 0.403 C8 0B1 13 0B1 C13 C13 C 0 1 Y N N -20.221 -38.895 -9.873 1.003 -1.126 1.529 C13 0B1 14 0B1 C12 C12 C 0 1 Y N N -21.195 -39.696 -9.264 0.159 -0.216 2.138 C12 0B1 15 0B1 C11 C11 C 0 1 Y N N -21.153 -39.914 -7.888 -1.103 0.009 1.626 C11 0B1 16 0B1 C10 C10 C 0 1 Y N N -20.129 -39.332 -7.131 -1.525 -0.682 0.493 C10 0B1 17 0B1 C9 C9 C 0 1 Y N N -19.161 -38.530 -7.739 -0.668 -1.593 -0.121 C9 0B1 18 0B1 C14 C14 C 0 1 Y N N -20.092 -39.563 -5.663 -2.881 -0.444 -0.063 C14 0B1 19 0B1 C20 C20 C 0 1 Y N N -19.549 -38.611 -4.794 -3.305 -1.140 -1.193 C20 0B1 20 0B1 C19 C19 C 0 1 Y N N -19.541 -38.858 -3.420 -4.566 -0.917 -1.708 C19 0B1 21 0B1 C18 C18 C 0 1 Y N N -20.100 -40.039 -2.926 -5.412 -0.005 -1.105 C18 0B1 22 0B1 C16 C16 C 0 1 Y N N -20.642 -40.990 -3.789 -4.997 0.693 0.021 C16 0B1 23 0B1 C15 C15 C 0 1 Y N N -20.638 -40.737 -5.158 -3.735 0.470 0.548 C15 0B1 24 0B1 O2 O2 O 0 1 N N N -21.181 -42.164 -3.294 -5.831 1.589 0.611 O2 0B1 25 0B1 C17 C17 C 0 1 N N N -21.338 -43.346 -4.091 -7.120 1.763 0.018 C17 0B1 26 0B1 H1 H1 H 0 1 N N N -14.836 -43.030 -6.863 4.114 3.747 -0.918 H1 0B1 27 0B1 H2 H2 H 0 1 N N N -15.974 -43.761 -8.045 3.109 3.693 0.550 H2 0B1 28 0B1 H3 H3 H 0 1 N N N -14.271 -43.441 -8.517 4.849 3.333 0.650 H3 0B1 29 0B1 H5 H5 H 0 1 N N N -15.102 -39.955 -5.605 3.655 2.415 2.266 H5 0B1 30 0B1 H6 H6 H 0 1 N N N -14.835 -41.645 -5.875 3.303 0.884 2.863 H6 0B1 31 0B1 H8 H8 H 0 1 N N N -16.592 -40.171 -11.226 3.337 -0.431 -2.671 H8 0B1 32 0B1 H10 H10 H 0 1 N N N -15.914 -37.059 -9.843 3.251 -2.726 -1.687 H10 0B1 33 0B1 H11 H11 H 0 1 N N N -17.433 -37.326 -11.933 3.175 -4.181 0.390 H11 0B1 34 0B1 H12 H12 H 0 1 N N N -17.885 -38.988 -11.421 2.992 -2.674 1.438 H12 0B1 35 0B1 H13 H13 H 0 1 N N N -18.346 -36.351 -9.744 1.029 -3.595 -0.828 H13 0B1 36 0B1 H14 H14 H 0 1 N N N -20.271 -38.716 -10.937 1.989 -1.299 1.934 H14 0B1 37 0B1 H15 H15 H 0 1 N N N -21.977 -40.144 -9.859 0.487 0.319 3.017 H15 0B1 38 0B1 H16 H16 H 0 1 N N N -21.903 -40.526 -7.410 -1.762 0.720 2.103 H16 0B1 39 0B1 H17 H17 H 0 1 N N N -18.393 -38.068 -7.137 -0.989 -2.128 -1.003 H17 0B1 40 0B1 H18 H18 H 0 1 N N N -19.139 -37.691 -5.183 -2.647 -1.853 -1.667 H18 0B1 41 0B1 H19 H19 H 0 1 N N N -19.105 -38.139 -2.742 -4.893 -1.457 -2.584 H19 0B1 42 0B1 H20 H20 H 0 1 N N N -20.112 -40.218 -1.861 -6.398 0.166 -1.511 H20 0B1 43 0B1 H21 H21 H 0 1 N N N -21.064 -41.462 -5.836 -3.413 1.009 1.427 H21 0B1 44 0B1 H22 H22 H 0 1 N N N -21.786 -44.144 -3.480 -7.003 2.104 -1.011 H22 0B1 45 0B1 H23 H23 H 0 1 N N N -21.994 -43.127 -4.946 -7.656 0.814 0.028 H23 0B1 46 0B1 H24 H24 H 0 1 N N N -20.354 -43.674 -4.458 -7.683 2.504 0.585 H24 0B1 47 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 0B1 C21 C6 SING N N 1 0B1 C21 C7 SING N N 2 0B1 O1 C1 DOUB N N 3 0B1 C2 C1 SING N N 4 0B1 C2 C3 DOUB N N 5 0B1 C13 C12 DOUB Y N 6 0B1 C13 C8 SING Y N 7 0B1 C6 C7 SING N N 8 0B1 C6 C3 SING N N 9 0B1 C7 C8 SING N N 10 0B1 C1 N2 SING N N 11 0B1 C3 N1 SING N N 12 0B1 C12 C11 SING Y N 13 0B1 C8 C9 DOUB Y N 14 0B1 N2 C5 SING N N 15 0B1 N2 C4 SING N N 16 0B1 N1 C4 DOUB N N 17 0B1 C11 C10 DOUB Y N 18 0B1 C9 C10 SING Y N 19 0B1 C4 N3 SING N N 20 0B1 C10 C14 SING N N 21 0B1 C14 C15 DOUB Y N 22 0B1 C14 C20 SING Y N 23 0B1 C15 C16 SING Y N 24 0B1 C20 C19 DOUB Y N 25 0B1 C17 O2 SING N N 26 0B1 C16 O2 SING N N 27 0B1 C16 C18 DOUB Y N 28 0B1 C19 C18 SING Y N 29 0B1 C5 H1 SING N N 30 0B1 C5 H2 SING N N 31 0B1 C5 H3 SING N N 32 0B1 N3 H5 SING N N 33 0B1 N3 H6 SING N N 34 0B1 C2 H8 SING N N 35 0B1 C6 H10 SING N N 36 0B1 C21 H11 SING N N 37 0B1 C21 H12 SING N N 38 0B1 C7 H13 SING N N 39 0B1 C13 H14 SING N N 40 0B1 C12 H15 SING N N 41 0B1 C11 H16 SING N N 42 0B1 C9 H17 SING N N 43 0B1 C20 H18 SING N N 44 0B1 C19 H19 SING N N 45 0B1 C18 H20 SING N N 46 0B1 C15 H21 SING N N 47 0B1 C17 H22 SING N N 48 0B1 C17 H23 SING N N 49 0B1 C17 H24 SING N N 50 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 0B1 SMILES ACDLabs 12.01 "O=C1C=C(N=C(N)N1C)C4CC4c3cccc(c2cccc(OC)c2)c3" 0B1 InChI InChI 1.03 "InChI=1S/C21H21N3O2/c1-24-20(25)12-19(23-21(24)22)18-11-17(18)15-7-3-5-13(9-15)14-6-4-8-16(10-14)26-2/h3-10,12,17-18H,11H2,1-2H3,(H2,22,23)/t17-,18-/m0/s1" 0B1 InChIKey InChI 1.03 QECXNBWGUGUPSI-ROUUACIJSA-N 0B1 SMILES_CANONICAL CACTVS 3.370 "COc1cccc(c1)c2cccc(c2)[C@@H]3C[C@@H]3C4=CC(=O)N(C)C(=N4)N" 0B1 SMILES CACTVS 3.370 "COc1cccc(c1)c2cccc(c2)[CH]3C[CH]3C4=CC(=O)N(C)C(=N4)N" 0B1 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CN1C(=O)C=C(N=C1N)[C@H]2C[C@H]2c3cccc(c3)c4cccc(c4)OC" 0B1 SMILES "OpenEye OEToolkits" 1.7.6 "CN1C(=O)C=C(N=C1N)C2CC2c3cccc(c3)c4cccc(c4)OC" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 0B1 "SYSTEMATIC NAME" ACDLabs 12.01 "2-amino-6-[(1S,2R)-2-(3'-methoxybiphenyl-3-yl)cyclopropyl]-3-methylpyrimidin-4(3H)-one" 0B1 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "2-azanyl-6-[(1S,2R)-2-[3-(3-methoxyphenyl)phenyl]cyclopropyl]-3-methyl-pyrimidin-4-one" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 0B1 "Create component" 2012-07-26 PDBJ 0B1 "Initial release" 2012-10-19 RCSB 0B1 "Other modification" 2020-06-01 RCSB ##